Accessing BCO-DMO data
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| griddap | Subset | tabledap | Make A Graph | wms | files | Accessible | Title | Summary | FGDC | ISO 19115 | Info | Background Info | RSS | Institution | Dataset ID | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_750328 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_750328.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_750328/ | public | [Clownfish predatory posture] - Quantification of a previously undescribed fast-start of larval clownfish targeting copepod prey: predatory posture, speed and acceleration from high-speed video, July 2015 (The Drive to Survive: Copepods vs Ichthyoplankton) | Posture, strike speed, and acceleration of clownfish larval attack on copepods, from high-speed videos, June-July 2015. Results of these data are published in Fashingbauer et al (in revision, J. Exp. Biol.) and Robinson et al (accepted, MEPS).\n\ncdm_data_type = Other\nVARIABLES:\nTRIAL_DATE (unitless)\nBIRTHDATE (unitless)\nDPH (days post hatch)\nFISH_AGE_CLASS (unitless)\nPREY_STAGE_CLASS (unitless)\nSTAGE_CATEGORY (unitless)\nCLIP_ID (unitless)\nCLIP_START (unitless)\nCLIP_END (unitless)\nCLIP_DURATION (# of frames)\nPIXEL_TO_MM (pixels per millimeter)\nBODY_LENGTH (milllimeters)\nFRAME_APPROACH_START (frame #)\nAPPROACH_DURATION (seconds)\nFRAME_T0_STRIKE (frame #)\nSTRIKE_DISTANCE_PIXEL (pixels)\nSTRIKE_DISTANCE_MM (milllimeters)\nTIME_FROM_T0_TO_CAPTURE (milliseconds)\nPEAK_STRIKE_SPEED (millimeters/second)\nSTRIKE_SPEED_T_2ms (millimeters/second)\nSTRIKE_SPEED_T1ms (millimeters/second)\nSTRIKE_SPEED_T3ms (millimeters/second)\nSTRIKE_SPEED_T5ms (millimeters/second)\nSTRIKE_SPEED_T7ms (millimeters/second)\nSTRIKE_SPEED_T9ms (millimeters/second)\n... (31 more variables)\n | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_750328_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_750328/index.htmlTable | https://www.bco-dmo.org/dataset/750328
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_750328.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_750328&showErrors=false&email= | BCO-DMO | bcodmo_dataset_750328 | ||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_752902 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_752902.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_752902/ | public | [FieldData_FidalgoBay_July2017] - Water quality data and Olympia oyster abundance counts from depth-specific sampling collected by boat in Fidalgo Bay, WA, during July 2017 (RUI: Will climate change cause 'lazy larvae'? Effects of climate stressors on larval behavior and dispersal) | This dataset reports water quality data and Olympia oyster abundance counts from depth-specific sampling collected by boat in Fidalgo Bay, WA, during July 2017. These data were published in the following Masters Thesis: McIntyre, Brooke A., \\Vertical Distribution of Olympia oyster (Ostrea lurida) larvae in Fidalgo Bay, WA\\ (2018). WWU Graduate School Collection. 694. https://cedar.wwu.edu/wwuet/694\n\ncdm_data_type = Other\nVARIABLES:\ntime (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)\ndate_local (unitless)\ntime_local (unitless)\ntide_category (unitless)\nprofile (unitless)\ndepth_seafloor_m (Depth, meters)\ndepth_sample_m (Depth, meters)\ndepth_cat (Depth, unitless)\ncurrent_velocity_m_s (meters per second)\nchla_ug_L (Concentration Of Chlorophyll In Sea Water, micrograms per liter seawater)\ntemp_c (degrees Celcius)\nsalinity (Sea Water Practical Salinity, PSU)\nwind_anemometer_m_s (meters per second)\noyster_larvae_100L (Oyster Larvae 100 L, larvae per 100-Liters seawater)\noyster_larvae_m3 (larvae per cubic meter)\n | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_752902_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_752902/index.htmlTable | https://www.bco-dmo.org/dataset/752902
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_752902.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_752902&showErrors=false&email= | BCO-DMO | bcodmo_dataset_752902 | ||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_627835.subset | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_627835 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_627835.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_627835/ | public | [Inferno vent plume proteins-Av1] - Proteins identified from the black smoker chimney Inferno hydrothermal vent plume meta-proteome - replicate Av1 - on the Axial seamount off the coast of Washington in 2011. (Mixotrophic bacteria and the cryptic marine sulfur cycle: Mechanisms of carbon assimilation and sulfur oxidation in the Arctic96BD-19 GSO clade) | Proteins identified in the Inferno hydrothermal vent plume meta-proteome\n(replicate Av1).\\u00a0 Only proteins identified by peptides with a protein\nprobability >0.9 are listed.\\u00a0\n \nThese data are reported as Supplementary Table 3 and discussed in [Mattes et\nal., 2013](\\\\http://dmoserv3.bco-\ndmo.org/data_docs/SulfurOxidizers/Mattes_2013_PlumeProt.pdf\\\\).\n(doi:10.1038/ismej.2013.113)\n \nThe FASTA information in the data was expanded to include the metadata when\nthose FASTA headers were linked to GenBank.\\u00a0\n \nProteins that were identified in biological replicate Av2 that were not\nidentified in biological replicate Av1. (GSO: Gamma Sulfur Oxidizer)\n \n \n \\u00a0\n \n\\u00a0\n \n\\u00a0\n \n\\u00a0\n \n\\u00a0\n \n\\Although fewer proteins were identified in Av2, nearly all (94%) of the\nproteins identified in Av2 were also identified in Av1.\\u00a0 Differences in\nthe total number of proteins identified in replicate samples may result from\ndifferences in the amount of biomass obtained during sample processing.\\\n \nDMO notes: \n Put multiple FASTA entries on separate lines \n Split out one number in FASTA header for linking \n Left it sorted by Total Independent Spectra column \n Added linkage column \n Removed commas in 'consensus annotation' column (signals database to put in\nnew column) \n Reordered columns to put KEGG last -- much longer than any other column\n\ncdm_data_type = Other\nVARIABLES:\nentry (number)\n... (10 more variables)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_627835_fgdc.xml | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_627835_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_627835/index.htmlTable | https://www.bco-dmo.org/dataset/627835
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_627835.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_627835&showErrors=false&email= | BCO-DMO | bcodmo_dataset_627835 | ||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_661151 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_661151.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_661151/ | public | [Percent cover of sessile invertebrates and algae] - Percent cover of sessile invertebrates and algae along the coast of Monterey and Carmel starting in 1999 (Kelp Forest Resilience project) (Kelp forest community resilience in action: adaptive responses of predators to a disease-driven food web perturbation) | Percent cover of sessile invertebrates and algae along the coast of Monterey and Carmel starting in 1999 (Kelp Forest Resilience project)\n\ncdm_data_type = Other\nVARIABLES:\nyear (unitless)\nsite (unitless)\nside (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nzone (unitless)\ntransect (unitless)\ndepth (m)\ncategory (unitless)\ndate (unitless)\nclasscode (unitless)\ncount (count)\npct_cov (centimeters (cm))\nnotes (dimensionless)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_661151_fgdc.xml | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_661151_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_661151/index.htmlTable | https://www.bco-dmo.org/dataset/661151
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_661151.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_661151&showErrors=false&email= | BCO-DMO | bcodmo_dataset_661151 |