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https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_748415 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_748415.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_748415/ public [Bacterial cell counts] - Bacterial cell counts during CDOM monoculture experiment (Collaborative Research: Planktonic Sources of Chromophoric Dissolved Organic Matter in Seawater) This dataset is from a laboratory experiment. Four phytoplankton cultures and their associated bacterial communities were incubated in replicate roller bottles (1.9 L) over 3-6 weeks under laboratory conditions. Bacterial dynamics in the culture bottles were measured and correlated with geochemical parameters to determine the role of bacterial activities on the formation of CDOM in the cultures (Kinsey et al., 2018, see below).\\r\\n\\r\\nThe data include bacterial cell counts during CDOM monoculture experiment. The phytoplankton cultures were Skeletonema sp., Leptocylindrus sp., Phaeocystis sp. and Coscinodiscus sp. Growth stages were initial, exponential, stationary, and degradation.\n\ncdm_data_type = Other\nVARIABLES:\ntaxon (unitless)\ntime_point_day (days)\ntime_start (unitless)\ntime_end (unitless)\ncell_count (cells)\nflow_rate (microliters/minute)\ntime_elapsed_min (minutes)\nvolume (microliters)\nconcentration_uL (Concentration U L, cells/microliter)\nconcentration_mL (Concentration M L, cells/milliliter)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_748415/index.htmlTable https://www.bco-dmo.org/dataset/748415 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_748415.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_748415&showErrors=false&email= BCO-DMO bcodmo_dataset_748415
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3951 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3951.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3951/ public [biogeochem and biology] - Biogeochemical and biological data from Niskin bottle samples from R/V Atlantic Explorer cruises AE1102, AE1118, AE1206, AE1219 in the Sargasso Sea, Bermuda Atlantic Time-Series Station from 2011-2012 (Trophic BATS project) (Plankton Community Composition and Trophic Interactions as Modifiers of Carbon Export in the Sargasso Sea \t) Biogeochemical and biological data from Niskin bottle samples from R/V Atlantic Explorer cruises AE1102, AE1118, AE1206, AE1219 in the Sargasso Sea, Bermuda Atlantic Time-Series Station from 2011-2012.\n\ncdm_data_type = Other\nVARIABLES:\ncruise_id (text)\nstation (integer or text)\ncast (integer)\ndate (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\njulian_day (decimal day)\ntime_local (HHMM)\ndepth (m)\ndepth_nom (Depth, meters)\nniskin_flag (dimensionless)\ntemp (Temperature, degrees Celsius)\nsal (parts per thousand (ppt))\ndensity (kg per cubic meter)\nchl_a (Concentration Of Chlorophyll In Sea Water, micrograms per liter)\nO2 (micromoles per kilogram)\nbeam (reciprocal meters)\nchla_tot_whole (Concentration Of Chlorophyll In Sea Water, micrograms per liter)\nchla_tot_gt5um (Concentration Of Chlorophyll In Sea Water, micrograms per liter)\nbact_prod (pmol Thy per liter per hour)\nbact_prod_C (milligrams C per cubic meter per day)\nbact_abund (cells per milliliter)\nbact_POC (micrograms per liter)\nprochlorococcus (cells per milliliter)\nsynechococcus (cells per milliliter)\n... (21 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_3951_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3951/index.htmlTable https://www.bco-dmo.org/dataset/3951 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3951.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3951&showErrors=false&email= BCO-DMO bcodmo_dataset_3951
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3120 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3120.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3120/ public [biogeochemistry microbiology] - Biogeochemistry and microbiology from the R/V Hermano Gines cruises in the Cariaco Basin from 1995 to 2015 (CARIACO Ocean Time-Series Program) Biogeochemistry and microbiology measurements in the Cariaco Basin. Microbiology sampling were conducted during special CARIACO cruises (distinct from the monthly, core sampling, time-series cruises) from November 1995 to November 2015. The specialized microbiology cruises were usually during May and November, and could be opportunistic or process-driven. There were typically at least 2 cruises per year, during which different variables were sampled and at different depths from the standard monthly CARIACO cruises. Bacteria production data were also reported for the microbiology cruises.\n\ncdm_data_type = Other\nVARIABLES:\nyear (unitless)\ntime (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)\nISO_DateTime_local (ISO Date Time Local, unitless)\nmonth (unitless)\nday (unitless)\nhour (unitless)\nDate (unitless)\ndecimal_year (unitless)\nlongitude (degrees_east)\nlatitude (degrees_north)\nCruise_number (unitless)\nCruise_Leg (unitless)\nStation (unitless)\nCast_number (unitless)\nBiogeochemical_Cruise_ID (unitless)\nCore_CARIACO_ID (unitless)\nNotes (unitless)\nComments (unitless)\nDepth (meters)\ndepth (Corrected Depth, m)\nWinkler_O2_avg (micromoles per liter)\n... (46 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_3120_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3120/index.htmlTable https://www.bco-dmo.org/dataset/3120 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3120.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3120&showErrors=false&email= BCO-DMO bcodmo_dataset_3120
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_666234 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_666234.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_666234/ public [Cell biovolumes] - Biovolume data from samples obtained on Gould cruise LMG1411 in the Western Antarctica Peninsula during 2014 (Polar Transcriptome project). (Iron and Light Limitation in Ecologically Important Polar Diatoms: Comparative Transcriptomics and Development of Molecular Indicators) Biovolume data from samples obtained on Gould cruise LMG1411 in the Western Antarctica Peninsula during 2014 (Polar Transcriptome project).\n\ncdm_data_type = Other\nVARIABLES:\nspecies (unitless)\nbiovolume_cell (um^3)\nsample_size (number)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_666234/index.htmlTable https://www.bco-dmo.org/dataset/666234 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_666234.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_666234&showErrors=false&email= BCO-DMO bcodmo_dataset_666234
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_644840 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_644840.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_644840/ public [Cellular element quotas: Si in Synechococcus cells] - Element quotas of individual Synechococcus cells collected during Bermuda Atlantic Time-series Study (BATS) cruises aboard the R/V Atlantic Explorer between dates 2012-07-11 and 2013-10-13 (Si_in_Syn project) (Understanding the Role of Picocyanobacteria in the Marine Silicate Cycle) Field work at the Bermuda Atlantic Time Series (BATS) site was done to assess\nthe contribution of Synechococcus and diatoms to total biogenic silica in\nsurface waters. The data include information about the elemental content\n(Silicon, Phosphorus, and Sulfur) of Synechococcus cells as measured by\nsynchrotron-based x-ray fluorescence (SBXF) microscopy.\\u00a0 Derived mole\nratios (Si:P, and Si:S) are also provided.\n \nReferences:\n \nTwining, B. S., Rauschenberg, S., Morton, P. L., & Vogt, S. (2015). Metal\ncontents of phytoplankton and labile particulate material in the North\nAtlantic Ocean. Progress in Oceanography, 137, 261\\u2013283.\ndoi:10.1016/j.pocean.2015.07.001  \n[https://www.researchgate.net/publication/282626294_Metal_contents_of_phytoplankton_and_labile_particulate_material_in_the_North_Atlantic_Ocean](\\\\https://www.researchgate.net/publication/282626294_Metal_contents_of_phytoplankton_and_labile_particulate_material_in_the_North_Atlantic_Ocean\\\\)\n \nDMO notes:\n \n  * Changed formatting of lat/lon to 4 decimal places from 5.\n \n  * Elemental content values rounded to two decimal places from 15.\n\ncdm_data_type = Other\nVARIABLES:\ncruise_id (text)\nBATS_bottle_ID (text)\ncast (text)\ndepth_nom (Depth, text)\ndepth (m)\nlatitude (degrees_north)\nlongitude (degrees_east)\nSXRF_run (text)\n... (6 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_644840_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_644840/index.htmlTable https://www.bco-dmo.org/dataset/644840 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_644840.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_644840&showErrors=false&email= BCO-DMO bcodmo_dataset_644840
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_782025 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_782025.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_782025/ public [Chemistry and cell counts] - Chemistry and cell counts of formation fluids from North Pond, western flank of the Mid-Atlantic Ridge, from 2012-2014 (Collaborative Research: Characterization of Microbial Transformations in Basement Fluids, from Genes to Geochemical Cycling) Chemistry and cell counts of formation fluids from North Pond\n\ncdm_data_type = Other\nVARIABLES:\nsample (unitless)\nbioproject_id (unitless)\ncollection_date (unitless)\ndescription (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndepth_minimum (Depth, meters)\ndepth_maximum (Depth, meters)\nCell_counts (cells per mililiter (cells/mL))\nconfidence_level_95pcnt (cells per mililiter (cells/mL))\nO2 (micromole per Liter (umol/L))\nNO3 (Mole Concentration Of Nitrate In Sea Water, micromole per Liter (umol/L))\nSi (Mass Concentration Of Silicate In Sea Water, micromole per Liter (umol/L))\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_782025_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_782025/index.htmlTable https://www.bco-dmo.org/dataset/782025 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_782025.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_782025&showErrors=false&email= BCO-DMO bcodmo_dataset_782025
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_745449 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_745449.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_745449/ public [Coastal SAR11 Physiochemical data] - Physiochemical data from samples collected along the coast of Louisiana, USA during 2018 (Collaborative Research: EAGER: Salinity-based selection between sister clades of abundant coastal bacterioplankton) Physiochemical data from samples collected along the coast of Louisiana, USA during 2018.\n\ncdm_data_type = Other\nVARIABLES:\nSite (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nDate (unitless)\nTime_Central (unitless)\nOffset (unitless)\nTime_UTC (unitless)\nTemp (Temperature, degrees Celsius)\nCond (ms/cm)\nSalinity (Sea Water Practical Salinity, unitless)\npH (Sea Water Ph Reported On Total Scale, unitless)\nCell_counts (cells/mL)\nPO4 (Mass Concentration Of Phosphate In Sea Water, umol/L)\nSiOH4 (Si OH4, umol/L)\nNO3 (Mole Concentration Of Nitrate In Sea Water, umol/L)\nNO2 (Mole Concentration Of Nitrite In Sea Water, umol/L)\nNH4 (Mole Concentration Of Ammonium In Sea Water, umol/L)\ntime (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_745449_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_745449/index.htmlTable https://www.bco-dmo.org/dataset/745449 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_745449.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_745449&showErrors=false&email= BCO-DMO bcodmo_dataset_745449
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3962 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3962.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3962/ public [Crocosphaera watsonii light experiment] - Results of laboratory experiment examining growth, CO2- and N2-fixation of Crocosphaera watsonii isolates in differing light intensities; conducted in the Hutchins Laboratory, USC (CO2 control of oceanic nitrogen fixation and carbon flow through diazotrophs) Results of laboratory experiment examining growth, CO2- and N2-fixation of Crocosphaera watsonii isolates in differing light intensities; conducted in the Hutchins Laboratory, USC.\n\ncdm_data_type = Other\nVARIABLES:\nisolate (text)\nlight (micromoles quanta per square meter per second (umol quanta m-2 s-1))\ngrowth_rate (per day)\ngrowth_rate_sd (per day)\ncell_diameter (micrometers (um))\ncell_diameter_sd (micrometers (um))\nC_specific_CO2_fix (per hour)\nC_specific_CO2_fix_sd (per hour)\nN_specific_gross_N2_fix (per hour)\nN_specific_gross_N2_fix_sd (per hour)\nN_specific_net_15N2_fix (N Specific Net 15 N2 Fix, per hour)\nN_specific_net_15N2_fix_sd (N Specific Net 15 N2 Fix Sd, per hour)\ngross_to_net_N2fix (ratio)\ngross_to_net_N2fix_sd (ratio)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3962/index.htmlTable https://www.bco-dmo.org/dataset/3962 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3962.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3962&showErrors=false&email= BCO-DMO bcodmo_dataset_3962
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_753017 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_753017.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_753017/ public [Dendraster_Grazing_OA_Expt2017] - Experimental grazing rates of sand dollar larvae (Dendraster excentricus) on algae (Dunaliella tertiolecta) under different ocean acidification conditions, July 2017 (RUI: Will climate change cause 'lazy larvae'? Effects of climate stressors on larval behavior and dispersal) Experimental grazing rates of sand dollar larvae (Dendraster excentricus) on algae (Dunaliella tertiolecta) under different ocean acidification conditions, July 2017.\n\ncdm_data_type = Other\nVARIABLES:\ntemp_c (degrees Celcius)\npH (unitless)\njar_type (unitless)\nreplicate (unitless)\ncount (unitless)\ncells (algae cells)\nsquares (squares)\ncell_concentration (algae cells per milliliter (#/mL))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_753017/index.htmlTable https://www.bco-dmo.org/dataset/753017 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_753017.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_753017&showErrors=false&email= BCO-DMO bcodmo_dataset_753017
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_723277 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_723277.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_723277/ public [Dinoflagellate culturing] - Size and chemical responses of two dinoflagellate species used in natural high light exposure experiments (Protist Signaling project) (Environmental stress and signaling based on reactive oxygen species among planktonic protists) Size and chemical responses of two dinoflagellate species used in natural high light exposure experiments (Protist Signaling project)\n\ncdm_data_type = Other\nVARIABLES:\nExperiment_ID (unitless)\ntime (Experiment Date, seconds since 1970-01-01T00:00:00Z)\nDinoflagellate_species (unitless)\nTotal_PAR_during_exposure_treatment (mol photons m^-2)\nSampling_timepoint (unitless)\nReplicate_cell_counts (cells ml-1)\nReplicate_cell_volume (um^3)\nReplicate_determinations_chlorophyll_a (Concentration Of Chlorophyll In Sea Water, pg cell-1)\nReplicate_determinations_chlorophyll_a_per_unit_cell_volume (Concentration Of Chlorophyll In Sea Water, mg L-1)\nReplicate_determinations_particulate_DMSP_fmolcell1 (fmol cell-1)\nReplicate_determinations_particulate_DMSP_mmolL_cellvol1 (Replicate Determinations Particulate DMSP Mmol L Cellvol1, mmol L cell vol-1)\nReplicate_determinations_dissolved_DMSP_nmolL1 (Replicate Determinations Dissolved DMSP Nmol L1, nmol L-1)\nReplicate_determinations_dissolved_DMSP_fmolcell1 (fmol cell-1)\nReplicate_determinations_total_DMSP (umol L-1)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_723277/index.htmlTable https://www.bco-dmo.org/dataset/723277 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_723277.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_723277&showErrors=false&email= BCO-DMO bcodmo_dataset_723277
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2423 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2423.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_2423/ public [EN321fcmnano] - Nanoplankton from flow cytometry from R/V Endeavor cruise EN321 to the Gulf of Maine and Georges Bank in 1999 as part of the U.S. GLOBEC program (GB project) (U.S. GLOBEC Georges Bank) Nanoplankton from flow cytometry from R/V Endeavor cruise EN321 to the Gulf of Maine and Georges Bank in 1999 as part of the U.S. GLOBEC program.\n\ncdm_data_type = Other\nVARIABLES:\ncast\nmonth_gmt\nday_gmt\ntime_gmt (hours and decimal minutes)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndepth (m)\ncell_lt2um (cells per milliliter)\ncell_2to10um (cells per milliliter)\ncell_gt10um (cells per milliliter)\ncrypto (cells per milliliter)\ncyano (cells per milliliter)\npico_euks (cells per milliliter)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_2423_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_2423/index.htmlTable https://www.bco-dmo.org/dataset/2423 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_2423.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_2423&showErrors=false&email= BCO-DMO bcodmo_dataset_2423
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_764480 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_764480.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_764480/ public [Fe, Pu partitioning and organic biopolymers] - Partitioning of iron and plutonium in exopolymeric substances and intracellular biopolymers: a comparison study between the coccolithophore Emiliania huxleyi and the diatom Skeletonema costatum (Biopolymers as carrier phases for selected natural radionuclides (of Th, Pa, Pb, Po, Be) in diatoms and coccolithophores) Iron (Fe), a micronutrient for algal growth, and plutonium (Pu), an anthropogenic radionuclide, share some common features. This includes similar oceanic distributions when different input modes are taken into account, as well as their chemical behavior, such as a high affinity to natural organic matter (NOM). The NOM produced by various phytoplankton communities can potentially influence Fe cycling in the ocean, and likely also influence the transport behavior of Pu. We conducted laboratory incubation experiments using the coccolithophore Emiliania huxleyi and the diatom Skeletonema costatum, in the presence of 59Fe and 238Pu as radiotracers, in order to differentiate Fe and Pu uptake by extracellular exopolymeric substances (EPS) and intracellular biopolymers. The Fe and Pu distributions in select organic compound classes including proteins, total carbohydrates (TCHO) and uronic acids (URA) produced by these two types of phytoplankton were compared. Our results indicated that most of the Fe and Pu (>95%) were found concurrently concentrated in E. huxleyi-derived non-attached EPS, while much less (<2%) was present in the intracellular fraction of E. huxleyi. By contrast, in the diatom S. costatum, both Fe and Pu distribution was EPS > intracellular biopolymers > outer cell covering (i.e., frustule). In fact, over 50% of Fe was concentrated in S. costatum-derived attached EPS and intracellular biopolymers. The diatom derived Fe-EPS complexes were more hydrophobic, with stronger tendency to aggregate in seawater. Fe binding to biopolymers in both E. huxleyi and S. costatum cultures was related to URA concentrations, but the overall distribution of URA between these two phytoplankton species was different. Our findings suggest that the presence of URA in S. costatum cellular surface (i.e., attached EPS) and its intracellular fraction could be an indicator for the Fe transport from the surrounding seawater to the diatom cells. However, for the coccolithophore E. huxleyi, Fe appeared not to be efficiently taken up during its growth. Instead, the more hydrophilic non-attached EPS (i.e., low protein/TCHO ratio) produced by E. huxleyi could have stabilized Fe in the colloidal form as Fe-EPS complexes. Similar partitioning behavior of Fe and Pu suggests that Pu isotopes can potentially serve as a tracer for the Fe biogeochemistry in the ocean.\n\ncdm_data_type = Other\nVARIABLES:\ntype (unitless)\nBiopolymer_fraction (unitless)\nCell_type (unitless)\n... (7 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_764480/index.htmlTable https://www.bco-dmo.org/dataset/764480 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_764480.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_764480&showErrors=false&email= BCO-DMO bcodmo_dataset_764480
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_808413 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_808413.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_808413/ public [Field domoic acid and copepods] - Domoic acid assimilation in copepods by consuming organic polymers and Pseudo-nitzschia from experiments conducted using water samples collected in northern Gulf of Mexico in 2017 and 2018. (The biotic and abiotic controls on the Silicon cycle in the northern Gulf of Mexico) Domoic acid assimilation in copepods by consuming organic polymers and Pseudo-nitzschia. Results from experiments designed to investigate the contribution of organic polymers and Pseudo-nitzschia to domoic acid trophic transfer.  Water samples were collected in the northern Gulf of Mexico in 2017 and 2018.\n\ncdm_data_type = Other\nVARIABLES:\ntime (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)\nlatitude (degrees_north)\nlongitude (degrees_east)\nDate (unitless)\ntime2 (Time, unitless)\nExperiment (unitless)\nTreatment (unitless)\nReplicate_bottle (unitless)\ndDA_conc (D DA Conc, micrograms (µg) per liter (L))\npDAa_conc (P DAa Conc, nanograms (ng) per liter (L))\nCell_tox (picograms (pg) per cell)\nPnitz_density (cells per liter)\nDA_cop_indiv (picograms (pg) per copepod)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_808413_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_808413/index.htmlTable https://www.bco-dmo.org/dataset/808413 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_808413.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_808413&showErrors=false&email= BCO-DMO bcodmo_dataset_808413
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_813210 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_813210.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_813210/ public [Flow Cytometry Results] - Results of the quantification of symbiont cell numbers from 400 Acropora hyacinthus colonies subjected to experimental bleaching in the summer of 2018 in Palau. (Predicting the global location of heat tolerant corals: Palau patch reefs as a general model) Results of the quantification of symbiont cell numbers from 400 Acropora hyacinthus colonies subjected to experimental bleaching in the summer of 2018 in Palau.\n\ncdm_data_type = Other\nVARIABLES:\nSample (dimensionless)\nTreatment (unitless)\nTemperature (degrees Celsius)\nSample_ID (dimensionless)\nALLEVENTS_Conc (cells/ml)\nSYMBIODINIUM_Conc (cells/ml)\nNumber_of_Events (unitless)\nCell_Count (cells/ul)\nTotal_Volume (microliters)\nAcquisition_Time (seconds)\nNegative_Total_Count (various)\nNegative_Events (cells/ml)\nNegative_Sym_Conc (various)\nNegative_Cells (cell/ul)\nNegative_Total_Vol (microliters)\nNegative_Acquisition_Time (seconds)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_813210/index.htmlTable https://www.bco-dmo.org/dataset/813210 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_813210.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_813210&showErrors=false&email= BCO-DMO bcodmo_dataset_813210
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_784480.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_784480 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_784480.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_784480/ public [global] - Calculated power from the oxidation of necromass that is produced in marine sediment on a global scale. (Develop a 1D biogeochemical-evolutionary model for deep sediments) Calculated power from the oxidation of necromass that is produced in marine sediment on a global scale.\n\ncdm_data_type = Other\nVARIABLES:\nDepth_below_SWI (Depth, meters (m))\nSediment_Age (years)\nPower_law_cells (cells per centimeter cubed (cells/cm3))\nNecromas (cells per centimeter cubed per year (cells/cm3/yr))\nDeath_rate (per year (yr-1))\nPower_cell_size_small (nanoJoules per year (nJ/yr))\nPower_cell_size_medium (nanoJoules per year (nJ/yr))\nPower_cell_size_large (nanoJoules per year (nJ/yr))\nlatitude (degrees_north)\nlongitude (degrees_east)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_784480_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_784480/index.htmlTable https://www.bco-dmo.org/dataset/784480 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_784480.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_784480&showErrors=false&email= BCO-DMO bcodmo_dataset_784480
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_762443.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_762443 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_762443.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_762443/ public [Groves Creek 'Omits] - Metagenomic, metatranscriptomics and 16S rRNA gene sequence data from diel sampling at Groves Creek Marsh, Skidaway Island, GA during July 2014 (Collaborative Research: Marine priming effect - molecular mechanisms for the biomineralization of terrigenous dissolved organic matter in the ocean) Groves Creek Marsh (31.972\\u00b0 N, 81.028\\u00b0 W), a temperate salt marsh fringing Skidaway Island, GA served as the field site for this study. During July 16-17, 2014, samples were collected every two hours and four minutes to evenly sample across two tidal cycles and one diurnal cycle.\n\ncdm_data_type = Other\nVARIABLES:\nTime_point (unitless)\ntime (seconds since 1970-01-01T00:00:00Z)\nTemperature (degrees Celsius)\ndepth (m)\nSalinity (Sea Water Practical Salinity, parts per thousand (ppt))\nCell_Density (cells per mililiter (cells/mL))\nBacterial_Production (milimole per hour (mmol/h))\nDOC (mm)\nTDN (mm)\nDOC_TDN (unitless)\na254_DOC (unitless)\nLignin (mg 1/ mg OC)\nlatitude (degrees_north)\nlongitude (degrees_east)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_762443_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_762443/index.htmlTable https://www.bco-dmo.org/dataset/762443 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_762443.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_762443&showErrors=false&email= BCO-DMO bcodmo_dataset_762443
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_511526 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_511526.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_511526/ public [growth phase exopolymers] - Experimental results: Exopolymer and carbohydrate production by diatoms with growth; conducted at the Thornton lab, TAMU from 2007-2012 (Diatom EPS Production project) (Effect of Temperature on Extracellular Polymeric Substance Production (EPS) by Diatoms) Data from laboratory experiment on exopolymer and carbohydrate production by\nthe diatoms Thalassiosira weissflogii (CCMP 1051), Skeletonema marinoi (CCMP\n1332), and Cylindrotheca closterium (CCMP 339) during the growth to death\nphases of the cultures.\n \nRelated references:  \n Chen, J. 2014. Factors affecting carbohydrate production and the formation\nof transparent exopolymer particles (TEP) by diatoms. Ph.D. dissertation,\nTexas A&M University, College Station, TX.\n\ncdm_data_type = Other\nVARIABLES:\nspecies (dimensionless)\ngrowth_phase (dimensionless)\nday (dimensionless)\nculture (dimensionless)\ncell_abundance (cells per milliliter (mL-1))\ncell_vol_mean (cubic micrometers (um^3))\nchla (Concentration Of Chlorophyll In Sea Water, micrograms per liter (ug L-1))\nchla_per_cell (Concentration Of Chlorophyll In Sea Water, picograms per cell (pg cell-1))\nchla_per_cell_vol (Concentration Of Chlorophyll In Sea Water, femtograms per cubic micrometer (fg um-3))\ntot_carb (micrograms per milliliter (ug mL-1))\ntot_carb_per_cell (picograms per cell (pg cell-1))\ntot_carb_per_cell_vol (femtograms per cubic micrometer (fg um-3))\ncolloidal_carb (micrograms per milliliter (ug mL-1))\ncollodial_per_cell (picograms per cell (pg cell-1))\ncolloidal_per_cell_vol (femtograms per cubic micrometer (fg um-3))\nEPS_carb (micrograms per milliliter (ug mL-1))\nEPS_carb_per_cell (picograms per cell (pg cell-1))\nEPS_carb_per_cell_vol (femtograms per cubic micrometer (fg um-3))\nHW_carb (micrograms per milliliter (ug mL-1))\n... (21 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_511526/index.htmlTable https://www.bco-dmo.org/dataset/511526 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_511526.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_511526&showErrors=false&email= BCO-DMO bcodmo_dataset_511526
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_660050 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_660050.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_660050/ public [Growth rate of Pleurochrysis carterae] - Experimental data on growth rates of Pleurochrysis carterae analyzed at Bigelow Laboratory from 2013. (OA Copes Coccoliths project) (Effects of ocean acidification on Emiliania huxleyi and Calanus finmarchicus; insights into the oceanic alkalinity and biological carbon pumps) Experimental data on growth rates of Pleurochrysis carterae analyzed at Bigelow Laboratory from 2013. (OA Copes Coccoliths project)\n\ncdm_data_type = Other\nVARIABLES:\npCO2_treatment (P CO2 Treatment, ppm)\nday (unitless)\ngrowth_cycle (unitless)\ncell_density (cell per milliliter cells/mL)\nln_cellDensity (Ln Cell Density, ln(cells/mL))\nlinest_slope ((ln(cells/mL))/day)\nlinest_intercept (unitless)\ngrowthRate (Growth Rate, u/day)\nmean_growthRate (Mean Growth Rate, u/day)\nstdev_growthRate (Stdev Growth Rate, day-1)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_660050/index.htmlTable https://www.bco-dmo.org/dataset/660050 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_660050.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_660050&showErrors=false&email= BCO-DMO bcodmo_dataset_660050
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_715903 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_715903/ public [Growth rates and bulk isotope values] - Growth rates, bulk isotope values, elemental composition data from the R/V Meteor M77 cruise in the Peruvian ocean margin from November to December 2008. (The Use of Nitrogen Isotopes of Amino Acids To Understand Marine Sedimentary 15N Records) Growth rates, bulk isotope values, elemental composition data from the R/V Meteor M77 cruise in the Peruvian ocean margin from November to December 2008.\n\ncdm_data_type = Other\nVARIABLES:\nTreatment_ID (unitless)\nGrowth_rate (days)\nCell_density (cells per milliliter)\nCell_size (microns)\nBulk_stable_isotope_d13C (Bulk Stable Isotope D13 C, per mil)\nBulk_stable_isotope_d15N (Bulk Stable Isotope D15 N, per mil)\nelemental_composition_C (percent)\nelemental_composition_N (percent)\nelemental_composition_C_N_atomic (percent)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_715903/index.htmlTable https://www.bco-dmo.org/dataset/715903 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_715903.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_715903&showErrors=false&email= BCO-DMO bcodmo_dataset_715903
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_549122.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_549122 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_549122.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_549122/ public [GT10-11 - cellular element quotas] - Cellular elemental content of individual phytoplankton cells collected during US GEOTRACES North Atlantic Transect cruises in the Subtropical western and eastern North Atlantic Ocean during Oct and Nov, 2010 and Nov. 2011 (U.S. GEOTRACES North Atlantic Transect) Individual phytoplankton cells were collected on the GEOTRACES North Atlantic\nTransect cruises were analyzed for elemental content using SXRF (Synchrotron\nradiation X-Ray Fluorescence). Carbon was calculated from biovolume using the\nrelationships of Menden-Deuer & Lessard (2000). Trace metal concentrations are\nreported.\n \nDownload zipped images:  \n[Chlorophyll](\\\\http://data.bco-dmo.org/GEOTRACES/Twining/Chl_image.zip\\\\)  \n[Light](\\\\http://data.bco-dmo.org/GEOTRACES/Twining/Light_image.zip\\\\)  \n[SXRF maps](\\\\http://data.bco-dmo.org/GEOTRACES/Twining/SXRF_map.zip\\\\)  \n[SXRF spectra](\\\\http://data.bco-\ndmo.org/GEOTRACES/Twining/SXRF_spectra.zip\\\\)\n \nRelated references:\n \nMenden-Deuer, S. and E. J. Lessard (2000). Carbon to volume relationships for\ndinoflagellates, diatoms, and other protist plankton. Limnology and\nOceanography 45(3): 569-579.\n \n* Twining, B. S., S. Rauschenberg, P. L. Morton, and S. Vogt. 2015. Metal contents of phytoplankton and labile particulate material in the North Atlantic Ocean. Progress in Oceanography 137: 261-283.)\n\ncdm_data_type = Other\nVARIABLES:\ncruise_id (unitless)\nproject (unitless)\nstation_GEOTRC (unitless)\nsta_PI (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\n... (28 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_549122_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_549122/index.htmlTable https://www.bco-dmo.org/dataset/549122 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_549122.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_549122&showErrors=false&email= BCO-DMO bcodmo_dataset_549122
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_628993.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_628993 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_628993.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_628993/ public [Incubation in diffuse flow vent fluids - Crab Spa] - Results from shipboard high-pressure incubations of diffuse flow vent fluids collected from the Crab Spa and Alvinella sites at East Pacific Rise during the AT26-10 expedition, Jan. 2014 (Microbial Communities at Deep-Sea Vents project) (An Integrated Study of Energy Metabolism, Carbon Fixation, and Colonization Mechanisms in Chemosynthetic Microbial Communities at Deep-Sea Vents) This dataset includes results from shipboard high-pressure incubations of\ndiffuse flow vent fluids collected from the Crab Spa (9.8398\\u00ba N,\n104.2913\\u00ba W) and Alvinella (9.8398\\u00ba N, 104.2915\\u00ba W) sites at\nEast Pacific Rise during the AT26-10 oceanographic expedition in January 2014.\nReported parameters include dates and time elapsed, flow rate, temperature,\npressure, and pH, and concentrations of NO3, NH4, H2, H2S, CH4.\n \nVent fluids used in shipboard incubations were corrected from diffuse flow\nvent sites at the East Pacific Rise (2503 m): Crab Spa (9.8398\\u00ba N,\n104.2913\\u00ba W) and Alvinella (9.8398\\u00ba N, 104.2915\\u00ba W) (see\ndescription in McNichol et al. [2016]). Fluids were collected using isobaric\ngas-tight samplers [Seewald et al., 2002] prior to their transfer to the\nshipboard continuous culture system [Foustoukos and Perez-Rodriguez, 2015].\nHere, high-pressure incubations (250 bars) were conducted at mesophilic (30\n\\u00baC) and thermophilic (50 \\u00baC) conditions to constrain the function\nand metabolic rates of denitrifying and DNRA microbial communities residing at\nCrab Spa and Alvinella, respectively. To enhance the activity of nitrate-\nrespiring anaerobic bacteria, an NO3- (5 mm) and H2(aq) (1.30 mM)-enriched\nmedium was introduced in the high-pressure incubations under strictly\nanaerobic conditions. Dissolved HCO3- (7.3 mm, 13C labeled) was used as added\ncarbon source. Vent fluids were introduced at a flow rate of 0.042 mL/min,\nwhile growth medium was added at a rate of 0.0042 mL/min. The two sets of\nexperiments were performed for 356 (Crab Spa) and 50 hours (Alvinella). Direct\ncell counts were conducted by staining cells with 0.1% acridine orange and\ncounting them with a fluorescence microscope. 15N/14N isotopic analysis of the\nNO3-, NH4+ and biomass were conducted with a Thermo Scientific Delta VPlus\nmass spectrometer and CE Instruments NA 2500 series elemental analyzer (EA).\n \nReferences:\n \nFoustoukos, D., and I. Perez-Rodriguez (2015), A continuous culture system for\nassessing microbial activities in the piezosphere, Applied and Environmental\nMicrobiology, 81(19), 6850-6856.\n \nMcNichol, J., S. P. Sylva, F. Thomas, C. D. Taylor, S. M. Sievert, and J. S.\nSeewald (2016), Assessing microbial processes in deep-sea hydrothermal systems\nby incubation at in situ temperature and pressure, Deep Sea Research Part I:\nOceanographic Research Papers, 115, 221-232.\n \nSeewald, J. S., K. W. Doherty, T. R. Hammar, and S. P. Liberatore (2002), A\nnew gas-tight isobaric sampler for hydrothermal fluids, Deep-Sea Research,\nPart I: Oceanographic Research Papers, 49(1), 189-196.\n\ncdm_data_type = Other\nVARIABLES:\ndescription (unitless)\n... (15 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_628993/index.htmlTable https://www.bco-dmo.org/dataset/628993 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_628993.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_628993&showErrors=false&email= BCO-DMO bcodmo_dataset_628993
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_788911 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_788911.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_788911/ public [Incubations: cell abundance, carbon fixation rates, nitrates] - Microbial cell abundance,carbon fixation rates, and nitrate concentrations during shipboard incubations of vent fluids at the diffuse-flow vent Crab Spa, East Pacific Rise on RV/Atlantis cruise AT37-12, May 2017 (Collaborative Research: Environmental Drivers of Chemoautotrophic Carbon Production at Deep-Sea Hydrothermal Vents - Comparative Roles of Oxygen and Nitrate) Microbial cell abundance, carbon fixation rates, and nitrate concentrations during shipboard incubations of vent fluids at the diffuse-flow vent Crab Spa, East Pacific Rise in the Eastern Tropical North Pacific (ETNP) on RV/Atlantis cruise AT37-12, May 2017.\n\ncdm_data_type = Other\nVARIABLES:\nincubation (unitless)\ntime_elapsed (hours)\ncell_abund (cells/milliliter)\ncarbon_fix (microgram Carbon/liter/day)\nNOX (micromol/liter)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_788911/index.htmlTable https://www.bco-dmo.org/dataset/788911 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_788911.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_788911&showErrors=false&email= BCO-DMO bcodmo_dataset_788911
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_511217 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_511217.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_511217/ public [oxidative stress TEP] - Experimental results: Exopolymer production by phytoplankton under oxidative stress; conducted at the Thornton lab, TAMU from 2007-2012 (Diatom EPS Production project) (Effect of Temperature on Extracellular Polymeric Substance Production (EPS) by Diatoms) Data from laboratory experiment on exopolymer production by the diatom Thalassiosira wessiflogii (CCMP 1051) and the cyanobacterium Synechococcus elongates_cf (CCMP 1379) under conditions of oxidative stress.\n\ncdm_data_type = Other\nVARIABLES:\nspecies (dimensionless)\nday (dimensionless)\nH2O2 (H2 O2, micromolar (uM))\nturbidity (NTU)\ncell_conc (cells per milliliter (cells mL-1))\nchla (Concentration Of Chlorophyll In Sea Water, micrograms per liter (ug L-1))\nPSII (quantum yield of photosystem II)\ncaspase_like_activity (relative fluorescence units per milligrams protein per hour (RFU mg protein-1 h-1))\nstained_cells_pcnt (percent (%))\nTEP_conc (micrometers TEP per milliliter (um2 mL-1))\nTEP_abund (TEP per milliliter (mL-1))\nTEP_per_chla (Concentration Of Chlorophyll In Sea Water, square millimeters of TEP per nanogram of chla (mm2 (ng chl. a)-1))\nCSP_conc (micrometers CSP per milliliter (um2 mL-1))\nCSP_abund (CSP per milliliter (mL-1))\nCSP_per_chla (Concentration Of Chlorophyll In Sea Water, square millimeters of CSP per nanogram of chlorophyll a (mm2 (ng chl. a)-1))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_511217/index.htmlTable https://www.bco-dmo.org/dataset/511217 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_511217.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_511217&showErrors=false&email= BCO-DMO bcodmo_dataset_511217
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774628 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774628.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_774628/ public [Picocyanobacteria TEP: Cell Abundance] - Cell abundance of xenic and axenic marine Prochlorococcus and Synechococcus cultures from laboratory experiments conducted in 2016 and 2017 (Aggregation of Marine Picoplankton) Cell abundance of xenic and axenic marine Prochlorococcus and Synechococcus cultures from laboratory experiments conducted in 2016 and 2017.\n\ncdm_data_type = Other\nVARIABLES:\nCulture (unitless)\nDays (count (days))\nCell_Abundance_rep1 (cells per mL)\nCell_Abundance_rep2 (cells per mL)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_774628/index.htmlTable https://www.bco-dmo.org/dataset/774628 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_774628.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_774628&showErrors=false&email= BCO-DMO bcodmo_dataset_774628
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_660194 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_660194.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_660194/ public [Pleurochrysis carterae 24 hour culture dynamics] - Pleurochrysis carterae diel culture dynamics analyzed at Bigelow Laboratory from 2013 (OA Copes Coccoliths project) (Effects of ocean acidification on Emiliania huxleyi and Calanus finmarchicus; insights into the oceanic alkalinity and biological carbon pumps) Pleurochrysis carterae diel culture dynamics analyzed at Bigelow Laboratory from 2013 (OA Copes Coccoliths project)\n\ncdm_data_type = Other\nVARIABLES:\npCO2_treatment (P CO2 Treatment, parts per million (ppm))\napprox_time (unitless)\nelapsed_time (hours)\ndate (unitless)\ntime2 (Time, unitless)\nlight (unitless)\npH (Sea Water Ph Reported On Total Scale, pH)\ntemperature (celsius)\nsalinity (Sea Water Practical Salinity, practical salinity units (PSU))\ninVivo_fluorescence (In Vivo Fluorescence, relative fluorescence units)\ncell_density (cells/mL)\nmean_cellDiameter (Mean Cell Diameter, microns (um))\nfluorescencePerCellDensity (Fluorescence Per Cell Density, fluorescence/cell/mL)\nPIC_ugCPerL (PIC Ug CPer L, ugC/L)\nPIC_pgCPerCell (PIC Pg CPer Cell, pgC/cell)\nNO3_NO2 (Mole Concentration Of Nitrate In Sea Water, umol/kg)\nNO3_UCSB (Mole Concentration Of Nitrate In Sea Water, umol/kg)\nNO3_Bigelow (Mole Concentration Of Nitrate In Sea Water, umol/kg)\nPO4_UCSB (Mass Concentration Of Phosphate In Sea Water, umol/kg)\nPO4_Bigelow (Mass Concentration Of Phosphate In Sea Water, umol/kg)\nSiO4 (Si O4, umol/kg)\nmean_SiO4 (Mean Si O4, umol/kg)\nTA (ueq/kg)\nDIC (umol/kg)\npCO2 (P CO2, uatm)\nHCO3 (umol/kg)\n... (4 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_660194/index.htmlTable https://www.bco-dmo.org/dataset/660194 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_660194.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_660194&showErrors=false&email= BCO-DMO bcodmo_dataset_660194
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_660244 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_660244.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_660244/ public [Pleurochrysis carterae growth cycle culture dynamics] - Pleurochrysis carterae growth cycle culture dynamics analyzed at Bigelow Laboratory from 2013 (OA Copes Coccoliths project) (Effects of ocean acidification on Emiliania huxleyi and Calanus finmarchicus; insights into the oceanic alkalinity and biological carbon pumps) Pleurochrysis carterae growth cycle culture dynamics analyzed at Bigelow Laboratory from 2013 (OA Copes Coccoliths project)\n\ncdm_data_type = Other\nVARIABLES:\npCO2_treatment (P CO2 Treatment, parts per million (ppm))\ndate (unitless)\nday (unitless)\ntime2 (Time, unitless)\npH (Sea Water Ph Reported On Total Scale, pH)\ntemperature (celsius)\nsalinity (Sea Water Practical Salinity, practical salnity unit (PSU))\ninVivo_fluorescence (In Vivo Fluorescence, relative fluorescence units)\ncell_density (cells per milliliter (cells/mL))\nmean_cellDiameter (Mean Cell Diameter, microns (um))\nfluorescencePerCellDensity (Fluorescence Per Cell Density, cells per milliliter (cells/mL)-1)\nPIC_ugCPerL (PIC Ug CPer L, ugC/L)\nPIC_pgCPerCell (PIC Pg CPer Cell, pgC/cell)\nPOC_ugCPermL (POC Ug CPerm L, ugC/mL)\nPOC_pgCPerCell (POC Pg CPer Cell, pgC/cell)\nNO2 (Mole Concentration Of Nitrite In Sea Water, umol/kg)\nNO3_NO2 (Mole Concentration Of Nitrate In Sea Water, umol/kg)\nNO3 (Mole Concentration Of Nitrate In Sea Water, umol/kg)\nPO4 (Mass Concentration Of Phosphate In Sea Water, umol/kg)\nSiO4 (Si O4, umol/kg)\nmean_SiO4 (Mean Si O4, umol/kg)\nTA (ueq/kg)\nDIC (umol/kg)\npCO2 (P CO2, uatm)\nHCO3 (umol/kg)\nCO3 (umol/kg)\nCO2 (umol/kg)\nomega_calcite (unitless)\ntime (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_660244/index.htmlTable https://www.bco-dmo.org/dataset/660244 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_660244.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_660244&showErrors=false&email= BCO-DMO bcodmo_dataset_660244
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_750823 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_750823.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_750823/ public [Pmin strain feeding 2] - Data from an experiment that measured the occurrence of feeding among 8 Prorocentrum minimum strains on fluorescently labeled bacteria or the cryptophyte Teleaulax amphioxeia (Exploring the physiological and ecological basis of mixotrophy in marine food webs) This dataset contains data from an experiment that measured the occurrence of feeding among 8 Prorocentrum minimum strains on fluorescently labeled bacteria or the cryptophyte Teleaulax amphioxeia.\n\ncdm_data_type = Other\nVARIABLES:\nPrey (unitless)\nStrain (unitless)\ntreatment (unitless)\nrep (unitless)\ncells (unitless)\ncells_feeding (unitless)\npcnt_cells_feeding (unitless)\nGFI (unitless)\nGFI_per_cell (unitless)\nOFI (unitless)\nOFI_per_cell (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_750823/index.htmlTable https://www.bco-dmo.org/dataset/750823 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_750823.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_750823&showErrors=false&email= BCO-DMO bcodmo_dataset_750823
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_528131.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_528131 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_528131.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_528131/ public [Series 4: Aggregation of Thalassiosira weissflogii as a function of pCO2, temperature and bacteria: Acclimatization Phase - Cell Counts] - Aggregation of Thalassiosira weissflogii as a function of pCO2, temperature and bacteria - Acclimatization Phase - Cell Counts from UCSB MSI Passow Lab from 2009 to 2010 (OA - Ocean Acidification and Aggregation project) (Will Ocean Acidification Diminish Particle Aggregation and Mineral Scavenging, Thus Weakening the Biological Pump? ) Series 4: Aggregation of Thalassiosira weissflogii as a function of pCO2,\ntemperature and bacteria: Acclimatisation Phase - Cell Counts\n \nRelated Reference:  \n[Aggregation and Sedimentation of Thalassiosira weissflogii (diatom) in a\nWarmer and More Acidified Future\nOcean](\\\\http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0112379\\\\)\n\ncdm_data_type = Other\nVARIABLES:\nLab_Id (text)\nlatitude (degrees_north)\nlongitude (degrees_east)\nTemp (Temperature, degrees C)\npCO2 (P CO2, text)\nsampling_date (unitless)\nday_of_acclimatisation (integer)\ndiatom_cell_count (number)\ndilution_factor ((tbd))\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_528131_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_528131/index.htmlTable https://www.bco-dmo.org/dataset/528131 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_528131.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_528131&showErrors=false&email= BCO-DMO bcodmo_dataset_528131
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_778703.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_778703 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_778703.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_778703/ public [SPG] - Modeling bio-energetics for South Pacific Gyre marine sediment at site U1370 (Develop a 1D biogeochemical-evolutionary model for deep sediments) This data relates to the calculation of bio-energetics for South Pacific Gyre marine sediment (site U1370).\n\ncdm_data_type = Other\nVARIABLES:\nlatitude (degrees_north)\nlongitude (degrees_east)\nDepth_below_SWI (Depth, meters (m))\nAge (years)\nPorosity (unitless)\nTOC (grams of Carbon per centimeter cubed (g C/cm3))\nPOC_degradation_rate (grams of Carbon per centimeter cubed per year (g C cm-3 y-1))\nBiomass (cells per centimeter cubed (cells/cm3))\nNecromass_produced (cells per centimeter cubed per year (cells cm-3 y-1))\nSpecific_death_rate (per year (y-1))\nSmall_cell_size_Necromass_C_mass (grams of Carbon per centimeter cubed per year (g C cm-3 y-1))\nsmall_size_power_from_necromass_plus_O2 (Jules per year (J y-1))\nMedium_cell_size_Necromass_C_mass (grams of Carbon per centimeter cubed per year (g C cm-3 y-1))\nmedium_size_power_from_necromass_plus_O2 ((J y-1))\nLarge_cell_size_Necromass_C_mass (grams of Carbon per centimeter cubed per year (g C cm-3 y-1))\nlarge_size_power_from_necromass_plus_O2 (Jules per year (J y-1))\nAcetate_Power_POC_plus_O2 (Jules per year (J y-1))\nType_III_IV_kerogen_Power_POC_plus_O2 (Jules per year (J y-1))\nLipid_n_alkane_Power_POC_plus_O2 (Jules per year (J y-1))\nPower_H2_plus_O2 (Jules per year (J y-1))\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_778703_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_778703/index.htmlTable https://www.bco-dmo.org/dataset/778703 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_778703.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_778703&showErrors=false&email= BCO-DMO bcodmo_dataset_778703
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_506135.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_506135 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_506135.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_506135/ public [Thalassiosira wessiflogii growth rate and TEP] - Results from growth rate experiment with the diatom Thalassiosira wessiflogii in semi-continuous culture; conducted at the Thornton lab, TAMU from 2007-2012 (Diatom EPS Production project) (Effect of Temperature on Extracellular Polymeric Substance Production (EPS) by Diatoms) Data from laboratory experiment on growth rate and transparent exopolymer particles (TEP) in the diatom Thalassiosira wessiflogii (CCMP 1051) in a semi-continuous culture (four replicate cultures).\n\ncdm_data_type = Other\nVARIABLES:\nday (dimensionless)\ndilution_rate (per day (day-1))\nculture (dimensionless)\ncell_abundance (cells per milliliter)\ncell_vol_mean (cubic micrometers (um^3))\ncell_vol_sd (cubic micrometers (um^3))\ncell_vol_n (dimensionless)\nchla (Concentration Of Chlorophyll In Sea Water, micrograms per liter (ug L-1))\nchla_per_cell (Concentration Of Chlorophyll In Sea Water, picograms per cell (pg cell-1))\nchla_per_cell_vol (Concentration Of Chlorophyll In Sea Water, femtograms per cubic micrometer (fg um-3))\ntot_carb (micrograms per milliliter (ug mL-1))\ntot_carb_per_cell (picograms per cell (pg cell-1))\ntot_carb_per_cell_vol (femtograms per cubic micrometer (fg um-3))\nTEP (TEP per milliliter (TEP mL-1))\nTEP_mean_size (square micrometers (um^2))\nTEP_sd (square micrometers (um^2))\nTEP_n (dimensionless)\ntot_TEP_area (square millimeters per milliliter (mm^2 mL-1))\nTEP_prod_rate (square millimeters per milliliter per day  (mm^2 mL-1 day-1))\nvol_conc (microliters per liter (uL L-1))\nvol_conc_sd (microliters per liter (uL L-1))\nvol_conc_n (dimensionless)\nagg_vol_conc (microliters per liter (uL L-1))\nagg_vol_conc_sd (microliters per liter (uL L-1))\nagg_vol_conc_n (dimensionless)\n... (5 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_506135/index.htmlTable https://www.bco-dmo.org/dataset/506135 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_506135.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_506135&showErrors=false&email= BCO-DMO bcodmo_dataset_506135

 
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