BCO-DMO ERDDAP
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https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_723935.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_723935 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_723935.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_723935/ public 15NO3 data, acetylene reduction assays, and NH4+ diffusion average summaries from samples collected in Little Lagoon, Alabama from 2012 to 2013. 15NO3 data, acetylene reduction assays, and NH4+ diffusion average summaries from samples collected in Little Lagoon, Alabama from 2012 to 2013.\n\ncdm_data_type = Other\nVARIABLES:\nYear (unitless)\nValue_Description (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nSite (unitless)\nAvg_p14 (umol N m-2 d-1)\nAvg_p14_SE (umol N m-2 d-1)\nAvg_DNF (umol N m-2 d-1)\nAvg_DNF_SE (umol N m-2 d-1)\nAvg_anammox (umol N m-2 d-1)\nAvg_anammox_SE (umol N m-2 d-1)\nAvg_D15 (umol N m-2 d-1)\nAvg_D15_SE (umol N m-2 d-1)\nAve_Pot_DNF (umole m-2 d-1)\nAve_Pot_DNF_SE (umole m-2 d-1)\nTotal_N2_fixation (umole m-2 d-1)\nTotal_N2_fixation_SE (umole m-2 d-1)\nSRB_N2_fixation (umole m-2 d-1)\nSRB_N2_fixation_SE (umole m-2 d-1)\nAvg_D (umole N m-2 d-1)\nerror_propogate_29 (umole N m-2 d-1)\nAvg_A (umole N m-2 d-1)\nerror_propogate_30 (umole N m-2 d-1)\nAvg_ra_percent (percent)\nAvg_DNRA (umole N m-2 d-1)\nAvg_DNRA_SE (umole N m-2 d-1)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_723935_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_723935/index.htmlTable https://www.bco-dmo.org/dataset/723935 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_723935.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_723935&showErrors=false&email= BCO-DMO bcodmo_dataset_723935
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_732864.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_732864 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_732864.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_732864/ public 57Fe Wall Loss Experiment data collected as part of a method development study investigating the precipitation and wall loss of labeled 57Fe when added to M9 Minimal Media This data was collected as part of a method development study investigating the precipitation and wall loss of labeled \\u2075\\u2077Fe when added to M9 Minimal Media, which is used to grow the model bacterial species Escherichia coli. The bulk media was prepared with the same components and a portion was treated with Chelex-100 to remove metals, while the other portion remained un-chelexed. Half of each treatment was spiked with labeled \\u2075\\u2077Fe and either 0.2 \\u03bcm or 0.02 \\u03bcm filtered for comparison of the dissolved and soluble fractions. The \\u2075\\u2077Fe content was monitored over four time points for one week in a shaking incubator, under the same conditions used to culture E. coli for labeling experiments.\n\ncdm_data_type = Other\nVARIABLES:\nDATE (unitless)\nSAMPLE_ID (unitless)\nDESCRIPTION (unitless)\nCHELEX (unitless)\nFe57_SPIKE (micromolar (uM))\nFILTER_SIZE (micrometers (um))\nDAY (days)\nFe56 (nanomolar (nM))\nFe57 (nanomolar (nM))\nFe57_to_Fe56 (unitless (percentage))\nNOTES (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_732864_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_732864/index.htmlTable https://www.bco-dmo.org/dataset/732864 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_732864.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_732864&showErrors=false&email= BCO-DMO bcodmo_dataset_732864
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_4018 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_4018.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_4018/ public Abundance and biomass of ciliates from inverted microscope counts from samples taken on R/V Atlantic Explorer cruises AE1102, AE1118, AE1206, AE1219 in the Sargasso Sea, Bermuda Atlantic Time-Series Station in 2011-2012 (Trophic BATS project) Abundance and biomass of ciliates from inverted microscope counts from samples taken on R/V Atlantic Explorer cruises AE1102, AE1118, AE1206, AE1219 in the Sargasso Sea, Bermuda Atlantic Time-Series Station in 2011-2012.\n\ncdm_data_type = Other\nVARIABLES:\ncruise_id (dimensionless)\ncast (dimensionless)\nstation (dimensionless)\nlocation_description (dimensionless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndepth (m)\ntotal_biomass (nanograms C per Liter)\ntaxon (dimensionless)\nabundance (cells per Liter)\nabund_upper_95pcnt_CI (cells per Liter)\nabund_lower_95pcnt_CI (cells per Liter)\nbiomass (nanograms C per Liter)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_4018_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_4018/index.htmlTable https://www.bco-dmo.org/dataset/4018 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_4018.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_4018&showErrors=false&email= BCO-DMO bcodmo_dataset_4018
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_4019 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_4019.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_4019/ public Abundance and biomass of protists from epifluorescence counts and bulk biomass from extracted chl-a from samples from R/V Atlantic Explorer cruises AE1102, AE1118, AE1206, AE1219 in the Sargasso Sea, Bermuda Atlantic Time-Series Station in 2011-12 Abundance and biomass of protists from epifluorescence counts and bulk biomass from extracted chl-a from samples from R/V Atlantic Explorer cruises AE1102, AE1118, AE1206, AE1219 in the Sargasso Sea, Bermuda Atlantic Time-Series Station in 2011-12.\n\ncdm_data_type = Other\nVARIABLES:\ncruise_id (dimensionless)\ncast (dimensionless)\nstation (dimensionless)\nlocation_description (dimensionless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndepth (m)\ntaxon (dimensionless)\ntotal_biomass_per_taxon (picograms C per milliliter)\nexperiment_num (dimensionless)\ndate (unitless)\nseason_year (text)\nlength (micrometers)\nwidth (micrometers)\nshape (dimensionless)\nabundance (cells per milliliter)\nabund_lower_95pcnt_CI (cells per milliliter)\nabund_upper_95pcnt_CI (cells per milliliter)\ncells_counted (dimensionless)\nbiovolume (cubic micrometers per milliliter)\ndino_biomass (picograms C per cell)\ndiatoms_biomass (picograms C per cell)\nprotists_biomass (picograms C per cell)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_4019_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_4019/index.htmlTable https://www.bco-dmo.org/dataset/4019 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_4019.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_4019&showErrors=false&email= BCO-DMO bcodmo_dataset_4019
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_739077 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_739077.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_739077/ public Accession numbers for raw sequences associated with field collections & microcosms, 2015 and 2016 Accession numbers for raw sequences associated with field collections & microcosms, 2015 and 2016\n\ncdm_data_type = Other\nVARIABLES:\nBioProject (Bio Project, unitless)\nstudy (unitless)\nsample_description (unitless)\nyear (unitless)\nnum_sequences (unitless)\nNCBI_link (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_739077_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_739077/index.htmlTable https://www.bco-dmo.org/dataset/739077 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_739077.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_739077&showErrors=false&email= BCO-DMO bcodmo_dataset_739077
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_715160 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_715160.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_715160/ public Amino acid d13C values of diatoms, bacteria, and core M772-003-2 samples from the R/V Meteor (M77) in the Peruvian ocean margin from November to December 2008. Amino acid d13C values of diatoms, bacteria, and core M772-003-2 samples from the R/V Meteor (M77) in the Peruvian ocean margin from November to December 2008.\n\ncdm_data_type = Other\nVARIABLES:\nsample_description (unitless)\nID (unitless)\nAla (per mil)\nAla_st_dev (per mil)\nAsx (per mil)\nAsx_st_dev (per mil)\nGlx (per mil)\nGlx_st_dev (per mil)\nGly (per mil)\nGly_st_dev (per mil)\nHis (per mil)\nHis_st_dev (per mil)\nIle (per mil)\nIle_st_dev (per mil)\nLeu (per mil)\nLeu_st_dev (per mil)\nLys (per mil)\nLys_st_dev (per mil)\nMet (per mil)\nMet_st_dev (per mil)\nPhe (per mil)\nPhe_st_dev (per mil)\nThr (per mil)\nThr_st_dev (per mil)\nTyr (per mil)\nTyr_st_dev (per mil)\nVal (per mil)\nVal_st_dev (per mil)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_715160_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_715160/index.htmlTable https://www.bco-dmo.org/dataset/715160 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_715160.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_715160&showErrors=false&email= BCO-DMO bcodmo_dataset_715160
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_652849 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_652849.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_652849/ public Bacterioplankton data from coral and coral mucus aquaria experiments conducted at Bermuda Institute of Ocean Sciences in 2013 Bacterioplankton data from coral and coral mucus aquaria experiments conducted at Bermuda Institute of Ocean Sciences in 2013\n\ncdm_data_type = Other\nVARIABLES:\ntreatment (unitless)\ntreatment_description (unitless)\ntank (unitless)\nmesocosm (unitless)\ntimepoint_name (days)\ntimepoint_days (days)\ntemp (Temperature, celsius)\nsalinity (Sea Water Practical Salinity, ppt)\nDAPI_count (cells per milliliter)\naccession_number (unitless)\nnonPigmentPico (Non Pigment Pico, cells per milliliter)\nsynechococcus (cells per milliliter)\npicoeukaryote (cells per milliliter)\nlowHeterotrophicBac (Low Heterotrophic Bac, cells per milliliter)\nhighHeterotrophicBac (High Heterotrophic Bac, cells per milliliter)\nSAR11 (cells per milliliter)\nrhodobacteracea (cells per milliliter)\nalteromonas (cells per milliliter)\nvibrio (cells per milliliter)\nthaumarchaeota (cells per milliliter)\neuryarchaeota (cells per milliliter)\nP04 (micromoles)\nN03_N02 (micromoles)\nSi04 (micromoles)\nN02 (micromoles)\nNH4 (Mole Concentration Of Ammonium In Sea Water, micromoles)\n... (9 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_652849_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_652849/index.htmlTable https://www.bco-dmo.org/dataset/652849 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_652849.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_652849&showErrors=false&email= BCO-DMO bcodmo_dataset_652849
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_767391.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_767391 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_767391.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_767391/ public Biological, chemical, and physical water quality indicators of the Neuse River, North Carolina from 2008 through 2013 The Neuse River Estuary Water Quality Dataset is a compilation of the biological, chemical and physical water quality data that was collected along the length of the Neuse River Estuary, NC from March 14, 1985 to February 15, 1989 and from January 24, 1994 to the present.  The primary purpose of this dataset was to provide long-term environmental information to supplement experimental, process-based research, including the Atlantic Coast Environmental Indicators Consortium (ACE-INC) project as well as other laboratory studies.\n\ncdm_data_type = Other\nVARIABLES:\nDate (unitless)\nYear (unitless)\nSeason (unitless)\nStation (unitless)\nSource (unitless)\ndepth2 (Depth, meters (m))\nYSI_Time (unitless)\ndepth (YSI Depth, m)\nYSI_Temp (degrees Celsius)\nYSI_SpecCond (YSI Spec Cond, milli Siemens per centimeter)\nYSI_Salinity (Sea Water Practical Salinity, parts per thousand)\nYSI_DOsat (unitless  (percent))\nYSI_DO (milligrams per liter)\nYSI_pH (YSI P H, unitless)\nYSI_Turbidity (NTU)\nYSI_Chlraw (relative fluorescence units)\nYSI_Chl (micrograms per liter)\nYSI_BP (millimeters of mercury)\nSecchi (meters)\nKd (per meter)\nCdom_Corrected (microgram per liter of quinine sulfate.)\nPOC (Particulate Organic Carbon, micrograms of carbon per liter)\n... (47 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_767391_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_767391/index.htmlTable https://www.bco-dmo.org/dataset/767391 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_767391.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_767391&showErrors=false&email= BCO-DMO bcodmo_dataset_767391
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2329 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2329.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_2329/ public Broad-scale station numbers and locations from the US-GLOBEC Georges Bank project Broad-scale station numbers and locations from the US-GLOBEC Georges Bank project\n\ncdm_data_type = Other\nVARIABLES:\nyear (unitless)\ndescription (n/a)\nstation (n/a)\nlat_deg (Latitude, degrees)\nlat_min (Latitude, minutes)\nlat_ddmm_tt (Latitude, ddmm.tt)\nlon_deg (Longitude, degrees)\nlon_min (Longitude, minutes)\nlon_ddmm_tt (Longitude, ddmm.tt)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndepth_w (Depth, meters)\ndistance (nautical miles)\npriority (n/a)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_2329_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_2329/index.htmlTable https://www.bco-dmo.org/dataset/2329 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_2329.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_2329&showErrors=false&email= BCO-DMO bcodmo_dataset_2329
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_712027 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_712027.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_712027/ public Chemical data associated with field collections from the Gulf of Maine, Nauset Marsh Estuary System, and Long Island Sound (Alexandrium isotopes project) Chemical data associated with field collections from the Gulf of Maine, Nauset Marsh Estuary System, and Long Island Sound (Alexandrium isotopes project)\n\ncdm_data_type = Other\nVARIABLES:\nDate (unitless)\nSample_ID (unitless)\nDescription (unitless)\ndepth (m)\nd15N_NO3 (D15 N NO3, per mil (0/00))\nd18O_NO3 (D18 O NO3, per mil (0/00))\nd15N_NH4 (Mole Concentration Of Ammonium In Sea Water, per mil (0/00))\nd15N_POM (D15 N POM, per mil (0/00))\nNO3 (micromoles per liter)\nNH4 (Mole Concentration Of Ammonium In Sea Water, micromoles per liter)\nPO4 (micromoles per liter)\nSilicate (Mass Concentration Of Silicate In Sea Water, micromoles per liter)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_712027_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_712027/index.htmlTable https://www.bco-dmo.org/dataset/712027 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_712027.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_712027&showErrors=false&email= BCO-DMO bcodmo_dataset_712027
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_782025 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_782025.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_782025/ public Chemistry and cell counts of formation fluids from North Pond, western flank of the Mid-Atlantic Ridge, from 2012-2014 Chemistry and cell counts of formation fluids from North Pond\n\ncdm_data_type = Other\nVARIABLES:\nsample (unitless)\nbioproject_id (unitless)\ncollection_date (unitless)\ndescription (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndepth_minimum (Depth, meters)\ndepth_maximum (Depth, meters)\nCell_counts (cells per mililiter (cells/mL))\nconfidence_level_95pcnt (cells per mililiter (cells/mL))\nO2 (micromole per Liter (umol/L))\nNO3 (Mole Concentration Of Nitrate In Sea Water, micromole per Liter (umol/L))\nSi (Mass Concentration Of Silicate In Sea Water, micromole per Liter (umol/L))\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_782025_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_782025/index.htmlTable https://www.bco-dmo.org/dataset/782025 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_782025.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_782025&showErrors=false&email= BCO-DMO bcodmo_dataset_782025
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_717687.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_717687 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_717687.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_717687/ public CTD data and analyses of bottles from CTD rosette samples collected on R/V Hugh R. Sharp cruise HRS1415 in August 2014 CTD data and analyses of bottles from CTD rosette samples collected on cruise HRS1415.\n\ncdm_data_type = Other\nVARIABLES:\nCast (unitless)\nStation (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndate (unitless)\ntime_local (unitless)\ntime_GMT (unitless)\ntime (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)\nDescription (unitless)\nBottle_Num (unitless)\ndepth (m)\ntemp (Temperature, degrees Celsius)\nsal (unitless)\nCTD_O2 (micromolar (uM))\nO2_sat_100pcnt (micromolar (uM))\nO2_sat (unitless (percent))\nfluor_chla (volts)\nTA (microles per kilogram (uM/kg))\nDIC (microles per kilogram (uM/kg))\npH (Sea Water Ph Reported On Total Scale, unitless (pH scale))\nParticulate_MnOx (Particulate Mn Ox, micromolar (uM))\nParticulate_MnOx_stdev (Particulate Mn Ox Stdev, micromolar (uM))\nDissolved_Mn2plus (micromolar (uM))\nDissolved_Mn2plus_stdev (micromolar (uM))\nDissolved_Mn3plus (micromolar (uM))\nDissolved_Mn3plus_stdev (micromolar (uM))\nDissolved_MnT (Dissolved Mn T, micromolar (uM))\n... (12 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_717687_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_717687/index.htmlTable https://www.bco-dmo.org/dataset/717687 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_717687.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_717687&showErrors=false&email= BCO-DMO bcodmo_dataset_717687
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3941.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3941 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3941.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3941/ public CTD profile data from 2010 R/V Llyr cruises, Downeast Maine (44.1N 68.1W 44.9N. 66.9W), Saco Bay, Maine (43.45N 70.33W, 43.47N 70.28W) CTD profile data from 2010 R/V Llyr cruises, Downeast Maine (44.1N 68.1W 44.9N. 66.9W), Saco Bay, Maine (43.45N 70.33W, 43.47N 70.28W).\n\ncdm_data_type = Other\nVARIABLES:\nYear (unitless)\ndeployment (text)\ndataset_name (text)\nsta_id (text)\nlocation (text)\ndate (unitless)\ntime2 (Time, hhmmss)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndataset_description (text)\ndepth (Dep SM, m)\nSal00 (PSU)\nTv290C (TV290 C, degrees Celsius)\nUpoly0 ((tbd))\nDensity00 (Kg/m^3)\nWetCDOM (Wet CDOM, mg/m^3)\nFlECO_AFL (Fl ECO AFL, mg/m^3)\nOxsatMg_L (Oxsat Mg L, mg/l)\nPar (Downwelling Photosynthetic Photon Radiance In Sea Water, uEinsteins/m^2/sec)\nSbeox0PS (Sbeox0 PS, percentage)\nTimeS (Time S, seconds)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_3941_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3941/index.htmlTable https://www.bco-dmo.org/dataset/3941 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3941.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3941&showErrors=false&email= BCO-DMO bcodmo_dataset_3941
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3419 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3419.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3419/ public CTD station locations for 2010 and 2011 R/V Llyr cruises, Downeast Maine (44.1N 68.1W 44.9N. 66.9W), Saco Bay, Maine (43.45N 70.33W, 43.47N 70.28W) (MuLTI project) CTD station locations for 2010 and 2011 R/V Llyr cruises, Downeast Maine (44.1N 68.1W 44.9N. 66.9W), Saco Bay, Maine (43.45N 70.33W, 43.47N 70.28W).\n\ncdm_data_type = Other\nVARIABLES:\nYear (unitless)\ndeployment (text)\ndataset_name (text)\nsta_id (text)\nlocation (text)\ndate (unitless)\ntime2 (Time, hhmmss)\nlongitude (degrees_east)\nlatitude (degrees_north)\ndataset_description (text)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_3419_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3419/index.htmlTable https://www.bco-dmo.org/dataset/3419 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3419.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3419&showErrors=false&email= BCO-DMO bcodmo_dataset_3419
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_681997 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_681997/ public Data from: Iacchei, M., E. Butcher, E. Portner, Goetze, E. (in press) It\\u2019s about time: Insights into temporal genetic patterns in oceanic zooplankton from biodiversity indices. This dataset\\u00a0consists of mitochondrial sequence data and specimen\ninformation for two species of copepods, Haloptilus longicornis and\nPleuromamma xiphias, collected at an open ocean time series site in the North\nPacific Subtropical Gyre (station ALOHA, 22.45N, 158W) during 11 of the\nroutine Hawai'i Ocean Time-series (HOT) research cruises from September of\n2012 to October of 2013 (HOT-246 to HOT-256).\\u00a0Data for Haloptilus\nlongicornis include\\u00a0a 546 base-pair fragment of mitochondrial cytochrome\nc oxidase subunit II for each of 483 individuals (mean of 44 animals per\ncruise). Data for Pleuromamma xiphias include\\u00a0a 551 base-pair fragment of\nmitochondrial cytochrome c oxidase subunit I for each of 510 individuals (mean\nof 46 animals per cruise). Information is also provided on the HOT cruise\nnumber, date, and specific tow from which each individual was collected. Life\nstage and sex of each animal are also noted when identifiable\n \nThese data are associated with the forthcoming publication:  \n Iacchei, M., E. Butcher, E. Portner, Goetze, E. (in press) It\\u2019s about\ntime: Insights into temporal genetic patterns in oceanic zooplankton from\nbiodiversity indices.\\u00a0 Limnology and Oceanography \\u00a0\n \nThe unique haplotypes in these data are also available under NCBI accession\nnumbers KY560470 - KY560514 [Haloptilus longicornis], KY560515 -\nKY560565\\u00a0[Pleuromamma xiphias].\n \nThe following files have been included in this dataset (note that the sequence\nIDs in these files differ from the NCBI sequence IDs):  \n HOT-HALO.fasta: A fasta-formatted text file containing sequences for a\nportion of the mitochondrial cytochrome c oxidase subunit II gene (COII; 546\nbp) for 483 Haloptilus longicornis individuals collected at Station ALOHA.\n \nHOT-PLXI.fasta: A fasta-formatted text file containing sequences for a portion\nof the mitochondrial cytochrome c oxidase subunit I gene (COI; 551 bp) for 510\nPleuromamma xiphias individuals collected at Station ALOHA.\n \nHALO.csv and PLXI.csv: Converted to csv from an Excel file consisting of one\nworksheet for Haloptilus longicornis and one worksheet for Pleuromamma\nxiphias. In each worksheet, column headings designate:  \n sample_id: the sample ID number associated with the original organism\ncollected, DNA extraction, and PCR amplification.  \n sequence_id: the sample ID number associated with sequences analysed for the\nproject.  \n genus: Genus of the collected organism.  \n species: Species of the collected organism.  \n cruise: The cruise number for the Hawai'i Ocean Time Series (HOT) cruise on\nwhich the specimen was collected.  \n tow: The net tow number on which the specimen was collected.  \n collection_date: The date on which the specimen was collected, formatted as\nyyyy-mm-dd.  \n stage_sex: The life stage (Copepodite or Adult) of the individual, and the\nsex (Copepodite, Female, Male).  \n stage: The life stage (Copepodite or Adult) of the individual. Column added\nby BCO-DMO\\u00a0from the original stage_sex column for ease of use.  \n sex: The sex (Copepodite, Female, or Male) of the individual.\\u00a0Column\nadded by BCO-DMO\\u00a0from the original stage_sex column for ease of use.  \n mtCO*_sequence: The mtDNA sequence (COII for Haloptilus longicornis; COI for\nPleuromamma xiphias) associated with that individual. This sequence matches\nthe sequence associated with the Sequence ID number in the respective fasta\nfile.\n\ncdm_data_type = Other\nVARIABLES:\nfile_link (unitless)\ndescription (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_681997_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_681997/index.htmlTable https://www.bco-dmo.org/dataset/681997 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_681997.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_681997&showErrors=false&email= BCO-DMO bcodmo_dataset_681997
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_723966 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_723966.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_723966/ public Denitrification and DNRA data from Little Lagoon, Alabama collected from 2012-2013 Denitrification and DNRA data from Little Lagoon, Alabama collected from 2012-2013\n\ncdm_data_type = Other\nVARIABLES:\nYear (unitless)\nValue_Description (unitless)\nDate (unitless)\nEast (umol N m-2 hr-1;  umol N m-2 d-1;  mmol NH4+ m-2 d-1)\nEast_SE (umol N m-2 hr-1;  umol N m-2 d-1;  mmol NH4+ m-2 d-1)\nMouth (umol N m-2 hr-1;  umol N m-2 d-1;  mmol NH4+ m-2 d-1)\nMouth_SE (umol N m-2 hr-1;  umol N m-2 d-1;  mmol NH4+ m-2 d-1)\nWest (umol N m-2 hr-1;  umol N m-2 d-1;  mmol NH4+ m-2 d-1)\nWest_SE (umol N m-2 hr-1;  umol N m-2 d-1;  mmol NH4+ m-2 d-1)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_723966_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_723966/index.htmlTable https://www.bco-dmo.org/dataset/723966 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_723966.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_723966&showErrors=false&email= BCO-DMO bcodmo_dataset_723966
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_753594 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_753594.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_753594/ public Depth profiles of dissolved O2 saturation and isotopologues from the R/V Yellowfin and R/V Kilo Moana from 2016-09-14 to 2017-08-28 Seawater was sampled from Niskin bottles associated with CTD casts on each cruise. Water for these dissolved gas isotope samples was the first to be sampled from a given Niskin bottle. When possible, bottles from the same cast were sampled, but depth profiles often came from separate casts at the same site.\n\ncdm_data_type = Other\nVARIABLES:\ndescription (unitless)\ndate (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndepth (m)\nO2_O2sat (unitless)\nd18O (D18 O, parts per thousand)\nD17O (D17 O, parts per million)\nD35 (parts per thousand)\nD36 (parts per thousand)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_753594_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_753594/index.htmlTable https://www.bco-dmo.org/dataset/753594 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_753594.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_753594&showErrors=false&email= BCO-DMO bcodmo_dataset_753594
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_653909.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_653909 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_653909.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_653909/ public Disease incidence survey and site descriptions on Abaco Island, Bahamas in 2015-2016 (Mangrove Die-off project) Disease incidence survey and site descriptions on Abaco Island, Bahamas in 2015-2016 (Mangrove Die-off project)\n\ncdm_data_type = Other\nVARIABLES:\nlocation (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nlesionedLeaves_count (Lesioned Leaves Count, count)\ndeadTrees_presence (Dead Trees Presence, unitless)\nsite_description (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_653909_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_653909/index.htmlTable https://www.bco-dmo.org/dataset/653909 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_653909.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_653909&showErrors=false&email= BCO-DMO bcodmo_dataset_653909
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_785167.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_785167 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_785167/ public Eastern oyster gonad methylation patterns in response to experimental ocean acidification Eastern oyster gonad methylation patterns in response to experimental ocean acidification at pCO2 levels 400 and 2800 ppm. Oysters were collected from an intertidal oyster reef in Plum Island Sound, MA, Gulf of Maine in mid-July 2016. This dataset includes GenBank BioProject PRJNA513384 metadata.\n\ncdm_data_type = Other\nVARIABLES:\nbioproject_accession (unitless)\nbiosample_accession (unitless)\nlibrary_ID (unitless)\ntitle (unitless)\nlibrary_strategy (unitless)\nlibrary_source (unitless)\nlibrary_selection (unitless)\nlibrary_layout (unitless)\nplatform (unitless)\ninstrument_model (unitless)\ndesign_description (unitless)\nfiletype (unitless)\nfilename (unitless)\nfilename2 (unitless)\nMBD_cv_id (unitless)\npCO2_treatment (P CO2 Treatment, ppm)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_785167_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_785167/index.htmlTable https://www.bco-dmo.org/dataset/785167 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_785167.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_785167&showErrors=false&email= BCO-DMO bcodmo_dataset_785167
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_747948.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_747948 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_747948.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_747948/ public Illumina sequencing data from sediment strata collected from the cold seeps of Hydrate Ridge, metalliferous sediments of Juan de Fuca Ridge, and organic-rich hydrothermal sediments of Guaymas Basin Illumina sequencing data (NCBI accession numbers) from sediment strata collected from the cold seeps of Hydrate Ridge, metalliferous sediments of Juan de Fuca Ridge, and organic-rich hydrothermal sediments of Guaymas Basin.\n\ncdm_data_type = Other\nVARIABLES:\nsequence_accession_number (unitless)\nlink (unitless)\nSpecies_Names (unitless)\ndescription_of_the_types_of_sequences (unitless)\nlocations_where_species_were_collected (unitless)\nlatitude_dms (Latitude, unitless)\nlongitude_dms (Longitude, unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nVessel (unitless)\nDive_number (unitless)\nsequencing_and_analysis_methods (unitless)\ninstrument_and_model (unitless)\nAnalysis_methods (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_747948_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_747948/index.htmlTable https://www.bco-dmo.org/dataset/747948 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_747948.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_747948&showErrors=false&email= BCO-DMO bcodmo_dataset_747948
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_734442 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_734442.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_734442/ public In situ temperature and light time-series from HOBO data loggers, Belize Mesoamerican Barrier Reef System (MBRS), Nov. 2014 - Oct. 2015 This dataset contains temperature and light data obtained from in situ HOBO V2 data loggers situated at each study site. These data were used in a coral study in Baumann et al. (2016) DOI: 10.1371/journal.pone.0162098.\n\ncdm_data_type = Other\nVARIABLES:\nsite (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ntype (unitless)\ndescription (unitless)\ntime (ISO Date Time Local, seconds since 1970-01-01T00:00:00Z)\ndate (unitless)\nmonth (unitless)\nday (unitless)\nyear (unitless)\ntime2 (Time, unitless)\nhobo_logger_temp (degrees Celsius)\nhobo_pendant_temp (degrees Celsius)\nlight (lumens/ft2)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_734442_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_734442/index.htmlTable https://www.bco-dmo.org/dataset/734442 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_734442.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_734442&showErrors=false&email= BCO-DMO bcodmo_dataset_734442
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_757485 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_757485.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_757485/ public Iron concentrations of phage from experiments of iron-labelled E. coli infected with T4 and T5 bacteriophage, 2018 and 2019. This data was collected as part of a study investigating the source of iron to bacteriophage (phage for short, or viruses that infect and kill bacteria) progeny. Evidence from a phage that infects E. coli shows iron incorporated into the tail fiber structure. This study aims at identifying whether the source of the iron is environmental or bacterially derived. E. coli bacterial cultures were grown in minimal media spiked with 10 \\u00b5M 57FeSO4 then infected with phage T4 or T5. The phages were purified by methods of centrifugation, filtration, density-dependent ultracentrifugation, and dialyzing. The resulting phage fractions were quantified by SYBR epifluorescence microscopy and metal concentrations were measured on an ELEMENT XR ICP-MS.\n\ncdm_data_type = Other\nVARIABLES:\ndate_utc (unitless)\nexpt_round (unitless)\nsample (unitless)\ndescription (unitless)\nFe_56_nM (Fe 56 N M, nanoMolar)\nFe_57_nM (Fe 57 N M, nanoMolar)\nvolume (liters)\nFe_56_nmol (nanomoles)\nFe_57_nmol (nanomoles)\nCu_63_nmol (nanomoles)\nZn_66_nmol (nanomoles)\nNi_60_nmol (nanomoles)\nPb_208_nmol (nanomoles)\nbact_cells_ml (cells/milliliter)\nphage_VPL_ml (virus-like particles/milliliter)\nFe_57_atoms_per_phage (atoms)\nnotes_expt (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_757485_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_757485/index.htmlTable https://www.bco-dmo.org/dataset/757485 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_757485.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_757485&showErrors=false&email= BCO-DMO bcodmo_dataset_757485
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_658497.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_658497 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_658497.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_658497/ public Isolation, culturing, and sequencing of bacteria and viruses collected in Canoe Cove, Nahant, MA during 2010 (Marine Bacterial Viruses project) Isolation, culturing, and sequencing of bacteria and viruses collected in Canoe Cove, Nahant, MA during 2010 (Marine Bacterial Viruses project)\n\ncdm_data_type = Other\nVARIABLES:\nbioproject_accession (unitless)\nenv_biome (unitless)\ngeo_loc_name (unitless)\norganism_type (unitless)\ncollection_date (unitless)\nisolation_source (unitless)\nsample_name (unitless)\norganism (unitless)\nstrain (unitless)\nisolate (unitless)\nhost (unitless)\nlab_host (unitless)\nsample_type (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ntemp (Temperature, degrees celsius)\nordinal_day_of_isolation (unitless)\ndescription (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_658497_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_658497/index.htmlTable https://www.bco-dmo.org/dataset/658497 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_658497.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_658497&showErrors=false&email= BCO-DMO bcodmo_dataset_658497
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_700279.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_700279 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_700279.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_700279/ public Metabarcoding zooplankton at station ALOHA: Operational taxonomic unit (OTU) tables and fasta files for representative sequences from each OTU (Plankton Population Genetics project) Metabarcoding data for the zooplankton community in the epipelagic, mesopelagic and upper bathypelagic zones (0-1500m) of the North Pacific Subtropical Gyre. The goal of this study was to assess the hidden diversity present in zooplankton assemblages in midwaters, and detect vertical gradients in species richness, depth distributions, and community composition of the full zooplankton assemblage. Samples were collected in June 2014 from Station ALOHA (22.75, -158) using a 1-meter square Multiple Opening and Closing Nets and Environmental Sampling System (MOCNESS, 200um mesh), on R/V Falkor cruise FK140613. Next generation sequence data (Illumina MiSeq, V3 chemistry, 300-bp paired-end) of the zooplankton assemblage derive from amplicons of the V1-V2 region of 18S rRNA (primers described in Fonseca et al. 2010). The data includes sequences and read count abundance information for molecular OTUs from both holoplanktonic and meroplanktonic taxa.  All results derive from analyses in mothur v1.36.1 (Schloss et al. 2009, Kozich et al. 2013).\n\ncdm_data_type = Other\nVARIABLES:\nanalysis_name (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nanalysis_description (unitless)\nOTU_ID (unitless)\nFA3_N1_SF1 (per OTU)\nFA3_N1_SF2 (per OTU)\nFA3_N1_SF3 (per OTU)\nFA3_N2_SF1 (per OTU)\nFA3_N2_SF2 (per OTU)\nFA3_N2_SF3 (per OTU)\nFA3_N3_SF1 (per OTU)\nFA3_N3_SF2 (per OTU)\nFA3_N3_SF3 (per OTU)\nFA3_N4_SF1 (per OTU)\nFA3_N4_SF2 (per OTU)\nFA3_N4_SF3 (per OTU)\n... (68 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_700279_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_700279/index.htmlTable https://www.bco-dmo.org/dataset/700279 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_700279.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_700279&showErrors=false&email= BCO-DMO bcodmo_dataset_700279
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_745518.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_745518 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_745518/ public Microbial eukaryotic focused metatranscriptome data from seawater collected in coastal California in May of 2015 Seawater was collected via Niskin bottles mounted with a CTD from the San Pedro Ocean Time-series (SPOT) station off the coast of Southern California near the surface (5 m), 150 and 890 m, in late May 2015. Raw sequence data was generated as part of a metatranscriptome study targeting the protistan community.  Raw sequences are available at the National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA) database (SRA Study ID: SRP110974, BioProject: PRJNA391503).  Sequences for BioProject PRJNA608423 will be available at NCBI on Jan 1st, 2021.\\r\\n\\r\\nThese data were published in Hu et al. (2018).\n\ncdm_data_type = Other\nVARIABLES:\nSRA_run (unitless)\nSRA_run_link (unitless)\nSRA_study (unitless)\nbioproject_accession (unitless)\nbiosample_accession (unitless)\nlibrary_ID (unitless)\ntitle (unitless)\nsample_name (unitless)\nlibrary_strategy (unitless)\nlibrary_source (unitless)\nlibrary_selection (unitless)\nlibrary_layout (unitless)\nplatform (unitless)\ninstrument_model (unitless)\ndesign_description (unitless)\nfiletype (unitless)\nfilename (unitless)\nfilename2 (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_745518_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_745518/index.htmlTable https://www.bco-dmo.org/dataset/745518 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_745518.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_745518&showErrors=false&email= BCO-DMO bcodmo_dataset_745518
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_745527.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_745527 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_745527.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_745527/ public NCBI accession metadata for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 Raw DNA and RNA V4 tag sequences include spatially and temporally distinct samples from coastal California.  Samples were collected in Niskin bottles with a CTD rosette at the San Pedro Ocean Time-series (SPOT) between April of 2013 and January of 2014.  This dataset contains sequence data accession numbers and metadata for the National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA) database (SRA Study ID: SRP070577, BioProject: PRJNA311248).\n\ncdm_data_type = Other\nVARIABLES:\nbioproject_accession (unitless)\nsample_name (unitless)\nSRA_run_ID (unitless)\nSRA_run_link (unitless)\nlibrary_ID (unitless)\nSRA_study_ID (unitless)\nSRA_title (unitless)\nlibrary_strategy (unitless)\nlibrary_source (unitless)\nlibrary_selection (unitless)\nlibrary_layout (unitless)\nplatform (unitless)\ninstrument_model (unitless)\ndesign_description (unitless)\nfiletype (unitless)\nfilename (unitless)\nfiletpe2 (unitless)\nfilename2 (unitless)\ndepth2 (Depth, various)\nlatitude (degrees_north)\nlongitude (degrees_east)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_745527_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_745527/index.htmlTable https://www.bco-dmo.org/dataset/745527 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_745527.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_745527&showErrors=false&email= BCO-DMO bcodmo_dataset_745527
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_700961.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_700961 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_700961.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_700961/ public NCBI Sequence Read Archive (SRA) accession numbers for fastq sequence files for each zooplankton community sample (Plankton Population Genetics project) These data include sample information and accession links to sequence data at\nThe National Center for Biotechnology Information (NCBI) Sequence Read Archive\n(SRA).\n \nThis data submission consists of metabarcoding data for the zooplankton\ncommunity in the epipelagic, mesopelagic and upper bathypelagic zones\n(0-1500m) of the North Pacific Subtropical Gyre. The goal of this study was to\nassess the hidden diversity present in zooplankton assemblages in midwaters,\nand detect vertical gradients in species richness, depth distributions, and\ncommunity composition of the full zooplankton assemblage. Samples were\ncollected in June 2014 from Station ALOHA (22.75, -158) using a 1 meter square\nMultiple Opening and Closing Nets and Environmental Sampling System (MOCNESS,\n200um mesh), on R/V Falkor cruise FK140613. \\u00a0Next generation sequence\ndata (Illumina MiSeq, V3 chemistry, 300-bp paired-end) of the zooplankton\nassemblage derive from amplicons of the V1-V2 region of 18S rRNA (primers\ndescribed in Fonseca et al. 2010). The data includes sequences and read count\nabundance information for molecular OTUs from both holoplanktonic and\nmeroplanktonic taxa\n \nRelated dataset containing OTU tables and fasta sequences (representative /\nmost abundance read for each OTU):  \n[Metabarcoding zooplankton at ](\\\\http://www.bco-\ndmo.org/dataset/700279\\\\)[station](\\\\http://www.bco-\ndmo.org/dataset/700279\\\\)[ ALOHA: OTU tables and ](\\\\http://www.bco-\ndmo.org/dataset/700279\\\\)[fasta](\\\\http://www.bco-\ndmo.org/dataset/700279\\\\)[ files](\\\\http://www.bco-\ndmo.org/dataset/700279\\\\)\n\ncdm_data_type = Other\nVARIABLES:\nanalysis_name (unitless)\n... (15 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_700961_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_700961/index.htmlTable https://www.bco-dmo.org/dataset/700961 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_700961.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_700961&showErrors=false&email= BCO-DMO bcodmo_dataset_700961
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_723948.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_723948 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_723948.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_723948/ public Number of gene markers identified in sediment in samples from Little Lagoon, Alabama collected from 2012-2013. Number of gene markers identified in sediment in samples from Little Lagoon, Alabama collected from 2012-2013.\n\ncdm_data_type = Other\nVARIABLES:\nYear (unitless)\nDate (unitless)\nValue_Description (unitless)\nMouth (g-1 sediment)\nMouth_SE (g-1 sediment)\nEast (g-1 sediment)\nEast_SE (g-1 sediment)\nWest (g-1 sediment)\nWest_SE (g-1 sediment)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_723948_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_723948/index.htmlTable https://www.bco-dmo.org/dataset/723948 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_723948.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_723948&showErrors=false&email= BCO-DMO bcodmo_dataset_723948
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_723957.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_723957 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_723957.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_723957/ public Potential denitrification and N2 fixation from slurry assays from Little Lagoon, Alabama collected from 2012-2013 Potential denitrification and N2 fixation from slurry assays from Little Lagoon, Alabama collected from 2012-2013\n\ncdm_data_type = Other\nVARIABLES:\nYear (unitless)\nDate (unitless)\nValue_Description (unitless)\nMouth (nanomol of nitrogen per gram per hour)\nMouth_SE (nanomol of nitrogen per gram per hour)\nWest (nanomol of nitrogen per gram per hour)\nWest_SE (nanomol of nitrogen per gram per hour)\nEast (nanomol of nitrogen per gram per hour)\nEast_SE (nanomol of nitrogen per gram per hour)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_723957_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_723957/index.htmlTable https://www.bco-dmo.org/dataset/723957 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_723957.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_723957&showErrors=false&email= BCO-DMO bcodmo_dataset_723957
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_665407 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_665407.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_665407/ public Presence and absence of iron and light-related functional genes collected on the Gould (LMG1411) cruise in the Western Antarctica Peninsula during 2014 (Polar Transcriptomes project) Presence and absence of iron and light-related functional genes collected on the Gould (LMG1411) cruise in the Western Antarctica Peninsula during 2014 (Polar Transcriptomes project)\n\ncdm_data_type = Other\nVARIABLES:\nspecies (unitless)\ndescription (unitless)\nprotein (unitless)\nRPKM (unitless)\nevalue (unitless)\nKO_num (unitless)\naccession_link (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_665407_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_665407/index.htmlTable https://www.bco-dmo.org/dataset/665407 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_665407.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_665407&showErrors=false&email= BCO-DMO bcodmo_dataset_665407
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_545844 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_545844.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_545844/ public Protist rates from epifluorescence counts; cyanobacteria rates from flow cytometry; bulk rates from extracted chlorophyll-a from R/V Atlantic Explorer cruises AE1102, AE1118, AE1206, AE1219 in the Sargasso Sea, BATS, 2011-2012 Protist rates from epifluorescence counts; cyanobacteria rates from flow cytometry; bulk rates from extracted chlorophyll-a from R/V Atlantic Explorer cruises AE1102, AE1118, AE1206, AE1219 in the Sargasso Sea, BATS, 2011-2012.\n\ncdm_data_type = Other\nVARIABLES:\ncruise_id (dimensionless)\ncast (dimensionless)\nstation (dimensionless)\nlocation_description (dimensionless)\nexperiment_num (dimensionless)\ndate (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ntaxon (dimensionless)\ndepth (m)\nu (per day)\ng (per day)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_545844_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_545844/index.htmlTable https://www.bco-dmo.org/dataset/545844 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_545844.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_545844&showErrors=false&email= BCO-DMO bcodmo_dataset_545844
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_788903.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_788903 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_788903/ public Reef Fish genetic accession numbers at NCBI Genbank Reef Fish genetic accession numbers at NCBI Genbank.\n\ncdm_data_type = Other\nVARIABLES:\nSpecies_Name (unitless)\nSequence_Description (unitless)\nCollection_Location (unitless)\nSequence_Analysis_Method (unitless)\nJournal_Publications (unitless)\nJournal_Publication_DOI (unitless)\nGenbank_Accession_Range (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_788903_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_788903/index.htmlTable https://www.bco-dmo.org/dataset/788903 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_788903.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_788903&showErrors=false&email= BCO-DMO bcodmo_dataset_788903
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_628993.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_628993 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_628993.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_628993/ public Results from shipboard high-pressure incubations of diffuse flow vent fluids collected from the Crab Spa and Alvinella sites at East Pacific Rise during the AT26-10 expedition, Jan. 2014 (Microbial Communities at Deep-Sea Vents project) This dataset includes results from shipboard high-pressure incubations of\ndiffuse flow vent fluids collected from the Crab Spa (9.8398\\u00ba N,\n104.2913\\u00ba W) and Alvinella (9.8398\\u00ba N, 104.2915\\u00ba W) sites at\nEast Pacific Rise during the AT26-10 oceanographic expedition in January 2014.\nReported parameters include dates and time elapsed, flow rate, temperature,\npressure, and pH, and concentrations of NO3, NH4, H2, H2S, CH4.\n \nVent fluids used in shipboard incubations were corrected from diffuse flow\nvent sites at the East Pacific Rise (2503 m): Crab Spa (9.8398\\u00ba N,\n104.2913\\u00ba W) and Alvinella (9.8398\\u00ba N, 104.2915\\u00ba W) (see\ndescription in McNichol et al. [2016]). Fluids were collected using isobaric\ngas-tight samplers [Seewald et al., 2002] prior to their transfer to the\nshipboard continuous culture system [Foustoukos and Perez-Rodriguez, 2015].\nHere, high-pressure incubations (250 bars) were conducted at mesophilic (30\n\\u00baC) and thermophilic (50 \\u00baC) conditions to constrain the function\nand metabolic rates of denitrifying and DNRA microbial communities residing at\nCrab Spa and Alvinella, respectively. To enhance the activity of nitrate-\nrespiring anaerobic bacteria, an NO3- (5 mm) and H2(aq) (1.30 mM)-enriched\nmedium was introduced in the high-pressure incubations under strictly\nanaerobic conditions. Dissolved HCO3- (7.3 mm, 13C labeled) was used as added\ncarbon source. Vent fluids were introduced at a flow rate of 0.042 mL/min,\nwhile growth medium was added at a rate of 0.0042 mL/min. The two sets of\nexperiments were performed for 356 (Crab Spa) and 50 hours (Alvinella). Direct\ncell counts were conducted by staining cells with 0.1% acridine orange and\ncounting them with a fluorescence microscope. 15N/14N isotopic analysis of the\nNO3-, NH4+ and biomass were conducted with a Thermo Scientific Delta VPlus\nmass spectrometer and CE Instruments NA 2500 series elemental analyzer (EA).\n \nReferences:\n \nFoustoukos, D., and I. Perez-Rodriguez (2015), A continuous culture system for\nassessing microbial activities in the piezosphere, Applied and Environmental\nMicrobiology, 81(19), 6850-6856.\n \nMcNichol, J., S. P. Sylva, F. Thomas, C. D. Taylor, S. M. Sievert, and J. S.\nSeewald (2016), Assessing microbial processes in deep-sea hydrothermal systems\nby incubation at in situ temperature and pressure, Deep Sea Research Part I:\nOceanographic Research Papers, 115, 221-232.\n \nSeewald, J. S., K. W. Doherty, T. R. Hammar, and S. P. Liberatore (2002), A\nnew gas-tight isobaric sampler for hydrothermal fluids, Deep-Sea Research,\nPart I: Oceanographic Research Papers, 49(1), 189-196.\n\ncdm_data_type = Other\nVARIABLES:\ndescription (unitless)\n... (15 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_628993_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_628993/index.htmlTable https://www.bco-dmo.org/dataset/628993 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_628993.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_628993&showErrors=false&email= BCO-DMO bcodmo_dataset_628993
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_658340.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_658340 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_658340/ public Sample numbers, barcode information, primer information and project name from bacteria samples collected in the Caribbean during 2013 (Contagious coral diseases project) Sample numbers, barcode information, primer information and project name from bacteria samples collected in the Caribbean during 2013 (Contagious coral diseases project)\n\ncdm_data_type = Other\nVARIABLES:\nproject_name (unitless)\nlinker_primer_sequence (unitless)\nsample_id (unitless)\nbarcode_sequence (unitless)\nbarcode_name (unitless)\ndescription (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_658340_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_658340/index.htmlTable https://www.bco-dmo.org/dataset/658340 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_658340.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_658340&showErrors=false&email= BCO-DMO bcodmo_dataset_658340
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_502618 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_502618.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_502618/ public Scientific sampling event log associated with the US GEOTRACES East Pacific Zonal Transect cruise from R/V Thomas G. Thompson TN303 in the tropical Pacific from Peru to Tahiti during 2013 (U.S. GEOTRACES EPZT project) Scientific Sampling Event Log for TN303 (GEOTRACES EPZT). Station numbers, Events, Dates/Times, Lat/Lons and Event descriptions are provided for each station.\n\ncdm_data_type = Other\nVARIABLES:\nGEOTRC_EVENTNO (integer)\nLOCATION (text)\nDATE_START (unitless)\nTIME_START (unitless)\ntime (ISO DATETIME START, seconds since 1970-01-01T00:00:00Z)\nDATE_END (unitless)\nTIME_END (unitless)\nISO_DATETIME_END (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nLAT_DEG_S (Latitude, degrees)\nLAT_MIN_S (Latitude, dec_mins)\nLON_DEG_W (degrees)\nLON_MIN_W (dec_mins)\nDEPTH_MIN (Depth, meters)\ndepth (m)\nEVENT_DESCRIPTION (text)\nSAMPLES_TAKEN (text)\nGEOTRACES_ID_NUMBER_RANGE (text)\nCOMMENT (text)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_502618_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_502618/index.htmlTable https://www.bco-dmo.org/dataset/502618 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_502618.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_502618&showErrors=false&email= BCO-DMO bcodmo_dataset_502618
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3485 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3485.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3485/ public Scientific sampling event log associated with the US GEOTRACES North Atlantic Transect from the R/V Knorr KN199-04 cruise in the subtropical N. Atlantic during 2010 (U.S. GEOTRACES NAT project) Scientific sampling event log associated with the US GEOTRACES North Atlantic Transect from the R/V Knorr KN199-04 cruise in the subtropical N. Atlantic during 2010 (U.S. GEOTRACES NAT project).\n\ncdm_data_type = Other\nVARIABLES:\nevent (integer)\nlocation (text)\nevent_description (text)\nGEOTRACES_ID_Num_Range (text)\ndate_start (unitless)\ntime_start (HHMM)\ndate_end (unitless)\ntime_end (HHMM)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndepth (m)\ndepth_max (Depth, meters)\nsamples_taken (text)\ncomment (text)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_3485_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3485/index.htmlTable https://www.bco-dmo.org/dataset/3485 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3485.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3485&showErrors=false&email= BCO-DMO bcodmo_dataset_3485
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3842.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3842 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3842.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3842/ public Scientific sampling event log from R/V Knorr cruise KN204-01 in the Subtropical northern Atlantic Ocean in 2011 (U.S. GEOTRACES NAT project) Scientific sampling event log from R/V Knorr cruise KN204-01 in the Subtropical northern Atlantic Ocean in 2011 (U.S. GEOTRACES NAT project).\n\ncdm_data_type = Other\nVARIABLES:\ncruise_id (text)\nyear (unitless)\nevent (integer)\nlocation (text)\nevent_description (text)\nGEO_sample_id_range (text)\nmonth_start (mm (01 to 12))\nday_start (dd (01 to 31))\ntime_start (HHMM)\nmonth_end (mm (01 to 12))\nday_end (dd (01 to 31))\ntime_end (HHMM)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndepth (m)\ndepth_max (Depth, meters)\nsamples_taken (text)\ncomment (text)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_3842_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3842/index.htmlTable https://www.bco-dmo.org/dataset/3842 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3842.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3842&showErrors=false&email= BCO-DMO bcodmo_dataset_3842
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2468 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_2468/ public SeaSoar CTD Data from R/V Wecoma cruise W0008 in the Northeast Pacific in 2000 as part of the U.S. GLOBEC program (NEP project) SeaSoar CTD data from R/V Wecoma cruise W0008 in the Northeast Pacific in 2000 as part of the U.S. GLOBEC-NEP program.\n\ncdm_data_type = Other\nVARIABLES:\nlink\ndescription\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_2468_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_2468/index.htmlTable https://www.bco-dmo.org/dataset/2468 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_2468.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_2468&showErrors=false&email= BCO-DMO bcodmo_dataset_2468
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_723984 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_723984.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_723984/ public Sediment oxygen demand and ammonium, nitrate plus nitrate, and phosphate flux data from Little Lagoon, Alabama Sediment oxygen demand and ammonium, nitrate plus nitrate, and phosphate flux data from Little Lagoon, Alabama from 2010-2013\n\ncdm_data_type = Other\nVARIABLES:\nYear (unitless)\nValue_Description (unitless)\nDate (unitless)\nEast (umol m-2 hr-1; umol m-2 d-1)\nEast_SE (umol m-2 hr-1; umol m-2 d-1)\nMouth (umol m-2 hr-1; umol m-2 d-1)\nMouth_SE (umol m-2 hr-1; umol m-2 d-1)\nWest (umol m-2 hr-1; umol m-2 d-1)\nWest_SE (umol m-2 hr-1; umol m-2 d-1)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_723984_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_723984/index.htmlTable https://www.bco-dmo.org/dataset/723984 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_723984.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_723984&showErrors=false&email= BCO-DMO bcodmo_dataset_723984
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_733680 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_733680.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_733680/ public Site locations for coral thermal response study at Belize Mesoamerican Barrier Reef System (MBRS), 2003-2015 Site locations for coral thermal response study at Belize Mesoamerican Barrier Reef System (MBRS), 2003-2015.\n\ncdm_data_type = Other\nVARIABLES:\nsite (unitless)\ndescription (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ncomments (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_733680_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_733680/index.htmlTable https://www.bco-dmo.org/dataset/733680 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_733680.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_733680&showErrors=false&email= BCO-DMO bcodmo_dataset_733680
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_814267 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_814267.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_814267/ public Sponge density and morphology and percent cover of sponges and associated community at Virgin Islands Territorial Coral Reef Monitoring Program site, pre- and post-hurricane, 2015-2017 Sponge density and morphology and percent cover of sponges and associated benthic community determined from videos of three transects at Virgin Islands Territorial Coral Reef Monitoring Program site, pre- and post-hurricane, 2015-2017.\n\ncdm_data_type = Other\nVARIABLES:\nYear (unitless)\nSite (unitless)\nsite_name (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nsite_description (unitless)\nTransect (unitless)\nSponge_density (sponges/meter^2)\nEncrusting_pcent (percent (%))\nExcavating_pcent (percent (%))\nMassive_pcent (percent (%))\nUpright_pcent (percent (%))\ncalcareous_algae (percent (%))\ncoral (percent (%))\ncyanobacterial_mats (percent (%))\nepilithic_algal_community (percent (%))\ngorgonians (percent (%))\nmacroalgae (percent (%))\nnon_living (percent (%))\nother_unknown_living (percent (%))\nzoanthids (percent (%))\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_814267_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_814267/index.htmlTable https://www.bco-dmo.org/dataset/814267 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_814267.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_814267&showErrors=false&email= BCO-DMO bcodmo_dataset_814267
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_814490 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_814490.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_814490/ public Sponge volume at Virgin Islands Territorial Coral Reef Monitoring Program\\u2019s (TCRMP) permanent monitoring sites, 2015-2017 Sponge volume at Virgin Islands Territorial Coral Reef Monitoring Program\\u2019s (TCRMP) permanent monitoring sites, 2015-2017.\n\ncdm_data_type = Other\nVARIABLES:\nyear (unitless)\nsite (unitless)\nsite_name (unitless)\nsite_description (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nquadrat (unitless)\nsponge_volume (centimeters^3 of sponge/meter^2 (cm3/m2))\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_814490_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_814490/index.htmlTable https://www.bco-dmo.org/dataset/814490 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_814490.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_814490&showErrors=false&email= BCO-DMO bcodmo_dataset_814490
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_719970 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_719970/ public Transcriptional profile of marine bacterium Ruegeria pomeroyi in a three-member co-culture study Transcriptional profile of marine bacterium Ruegeria pomeroyi in a three-member co-culture study. This dataset contains the processed, QC'ed, normalized sequence data. The full raw data file is deposited in the NCBI BioProject database under accession PRJNA381627.\n\ncdm_data_type = Other\nVARIABLES:\nLocus_Tag (unitless)\nDescription (unitless)\nDay7_R1 (TPM (transcripts per million))\nDay7_R2 (TPM (transcripts per million))\nDay9_R1 (TPM (transcripts per million))\nDay9_R2 (TPM (transcripts per million))\nDay12_R1 (TPM (transcripts per million))\nDay12_R2 (TPM (transcripts per million))\nDay15_R1 (TPM (transcripts per million))\nDay15_R2 (TPM (transcripts per million))\nDay18_R1 (TPM (transcripts per million))\nDay18_R2 (TPM (transcripts per million))\nDay23_R1 (TPM (transcripts per million))\nDay23_R2 (TPM (transcripts per million))\nDay30_R1 (TPM (transcripts per million))\nDay30_R2 (TPM (transcripts per million))\nDay37_R1 (TPM (transcripts per million))\nDay37_R2 (TPM (transcripts per million))\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_719970_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_719970/index.htmlTable https://www.bco-dmo.org/dataset/719970 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_719970.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_719970&showErrors=false&email= BCO-DMO bcodmo_dataset_719970
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_818765.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_818765 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_818765/ public Transcriptome data for bacteria collected eight hours after individual inoculation into a diatom Thalassiosira psuedonana culture Transcriptome data for bacteria Ruegeria pomeroyi DSS-3, Stenotrophomonas sp. SKA14, Polaribacter dokdonensis MED152, and Dokdonia MED134 collected eight hours after individual inoculation into a diatom Thalassiosira psuedonana culture. The sequence data description for PRHNA448168 is at https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA448168.\n\ncdm_data_type = Other\nVARIABLES:\nSample_Name (unitless)\nNCBI_Bioproject_Accession (unitless)\nBioSample (Bio Sample, unitless)\nDescription (unitless)\nreplicate (unitless)\nNCBI_Genome_Accession (unitless)\ntaxon_microbe (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_818765_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_818765/index.htmlTable https://www.bco-dmo.org/dataset/818765 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_818765.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_818765&showErrors=false&email= BCO-DMO bcodmo_dataset_818765
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_746654.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_746654 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_746654.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_746654/ public Trichodesmium AHL amendment metatranscriptomic reads accessions and metadata Trichodesmium is a marine, diazotrophic cyanobacterium that plays a central role in the biogeochemical cycling of carbon and nitrogen. Colonies ubiquitously co-occur with a diverse microbiome of heterotrophic bacteria. Here we show that manipulation of the microbiome with quorum sensing acyl homoserine lactone (AHL) molecules significantly modulated rates of N2 fixation by Trichodesmium collected from the western North Atlantic, with both positive and negative effects of varied magnitude. Changes in Trichodesmium N2 fixation did not clearly correlate with changes in microbiome composition or geochemical patterns. Metatranscriptome sequencing revealed significant changes in the relative abundance of microbiome transcripts encoding metabolic functions consistent with quorum sensing responses in model bacteria. There was little overlap in specific microbiome transcriptional responses to AHL addition between stations, and this variability in microbiome gene expression may underpin the heterogeneous changes in Trichodesmium N2 fixation. These data suggest the microbiome could play a large and previously overlooked role in modulating Trichodesmium N2 fixation. This metadata form describes the metatranscriptomic sequencing reads that were used in the study.\n\ncdm_data_type = Other\nVARIABLES:\nbioproject_accession (unitless)\nbiosample_accession (unitless)\nlibrary_ID (unitless)\ntitle (unitless)\nlibrary_strategy (unitless)\nlibrary_source (unitless)\nlibrary_selection (unitless)\nlibrary_layout (unitless)\nplatform (unitless)\ninstrument_model (unitless)\ndesign_description (unitless)\nfiletype (unitless)\nassembly (unitless)\nfilename (unitless)\n... (7 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_746654_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_746654/index.htmlTable https://www.bco-dmo.org/dataset/746654 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_746654.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_746654&showErrors=false&email= BCO-DMO bcodmo_dataset_746654
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_767641.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_767641 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_767641.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_767641/ public YSI data from the Neuse River from 2008-2013 The Neuse River Estuary Water Quality Dataset is a compilation of the biological, chemical and physical water quality data that was collected along the length of the Neuse River Estuary, NC from March 14, 1985 to February 15, 1989 and from January 24, 1994 to the present.  The primary purpose of this dataset was to provide long-term environmental information to supplement experimental, process-based research, including the Atlantic Coast Environmental Indicators Consortium (ACE-INC) project as well as other laboratory studies.\n\ncdm_data_type = Other\nVARIABLES:\nZlevel1 (unitless)\nZlevel2 (unitless)\nDate (unitless)\nStation (unitless)\ntime2 (Time, unitless)\ndepth (m)\nTemp (Temperature, degrees Celsius)\nSpCond (Sp Cond, milli Siemens per centimeter)\nSalinity (Sea Water Practical Salinity, parts per thousand)\nDOsat (percent)\nDOconc (milligrams per liter)\npH (Sea Water Ph Reported On Total Scale, unitless)\nTurbidity (NTU)\nFluorescence (relative fluorescence units)\nChlorophyll (Concentration Of Chlorophyll In Sea Water, micrograms per liter)\nPARdepth (meters (m))\nPAR1 (Einsteins/m2/s)\nPAR2 (Einsteins/m2/s)\nBarPress (Bar Press, millimeters of mercury)\nODO (unitless)\nDOsat_calc (unitless)\nDOconc_calc (unitless)\n... (6 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_767641_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_767641/index.htmlTable https://www.bco-dmo.org/dataset/767641 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_767641.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_767641&showErrors=false&email= BCO-DMO bcodmo_dataset_767641

 
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