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https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_658322.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_658322 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_658322/ public [Coral health status and DNA concentration] - Health status and species of each coral sample taken in the Caribbean during 2013 (Contagious coral diseases project) (Are coral diseases contagious?) Health status and species of each coral sample taken in the Caribbean during 2013 (Contagious coral diseases project)\n\ncdm_data_type = Other\nVARIABLES:\nspecies (unitless)\nhealth_status (unitless)\ndate_sampled (unitless)\ndate_tissue_airbrush (unitless)\ndate_DNA_extraction (unitless)\nsample_number (unitless)\nDNA_conc (ng mL -1)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_658322/index.htmlTable https://www.bco-dmo.org/dataset/658322 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_658322.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_658322&showErrors=false&email= BCO-DMO bcodmo_dataset_658322
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3519.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3519 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3519.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3519/ public [GT10 - CTD - ODF/SIOR Bottle] - ODF bottle data along with US GEOTRACES North Atlantic Transect from the R/V Knorr KN199-04 cruise in the subtropical N. Atlantic during 2010 (U.S. GEOTRACES NAT project) (U.S. GEOTRACES North Atlantic Transect) ODF bottle data along with US GEOTRACES North Atlantic Transect from the R/V Knorr KN199-04 cruise in the subtropical N. Atlantic during 2010.\n\ncdm_data_type = Other\nVARIABLES:\nEXPOCODE (text)\nSECT_ID (text)\nSTNNBR (integer)\nCASTNO (integer)\nGEOTRC_EVENTNO (integer)\nDATE (unitless)\ntime2 (TIME, unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nGEOTRC_SAMPNO (integer)\nSAMPNO (integer)\nBTLNBR (text)\nBTLNBR_FLAT_W (integer)\nBTO_DATE (unitless)\nBTL_TIME (unitless)\nBTL_LAT (decimal degrees)\nBTL_LON (decimal degrees)\nBTMDEPTH (meters, corrected)\nCTDPRS (decibars)\ndepth (CTDDEPTH, m)\nCTDTMP (ITS-90)\nCTDSAL (PSS-78)\nCTDSAL_FLAG_W (integer)\nSALNTY (PSS-78)\nSALNTY_FLAG_W (integer)\nCTDOXY (umol/kg)\n... (143 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_3519_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3519/index.htmlTable https://www.bco-dmo.org/dataset/3519 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3519.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3519&showErrors=false&email= BCO-DMO bcodmo_dataset_3519
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_649708 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_649708.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_649708/ public [Host-Symbiont respiration relationship] - Host-symbiont respiration related to symbiont density; anemones from Key Largo from (AnemoneOA project) (Ocean Acidification: Understanding the Impact of CO2 and Temperature on the Physiological, Genetic, and Epigenetic Response of a Model Sea Anemone System with Different Symbionts) Host-symbiont respiration related to symbiont density; anemones from Key Largo from (AnemoneOA project)\n\ncdm_data_type = Other\nVARIABLES:\nsample (unitless)\nholobiont_resp_total (micromoles of oxygen per hour)\nprot_normal_resp (micromoles of oxygen per hour per milligram protein)\nhost_CS_activity_product_total (Units per milligram protein X milligrams)\nhost_CS_activity (units per milligram protein)\ntotal_host_protein (milligrams)\nsymb_CS_activity (Units per milligram protein)\ntotal_anemone_CS_activity (Units)\nhost_DNA_total (micrograms)\nhost_symb_dens_normal (million cells per mg protein)\nsymb_biomass_fraction (dimensionless)\nsymb_respir_fraction (dimensionless)\ngenome_ratio_CO1 (dimensionless)\ngenome_ratio_AT96 (dimensionless)\ngenome_ratio_CO1_Pro (dimensionless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_649708/index.htmlTable https://www.bco-dmo.org/dataset/649708 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_649708.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_649708&showErrors=false&email= BCO-DMO bcodmo_dataset_649708
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_748064 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_748064.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_748064/ public [OTU table for 18S rRNA gene tag sequences from DNA and RNA] - Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 (Protistan, prokaryotic, and viral processes at the San Pedro Ocean Time-series) This dataset is a raw output operational taxonomic unit (OTU) table generated by processing and clustering raw 18S rRNA gene tag sequences from extracted DNA and RNA. Columns represent samples, including month sampled, material (either extracted RNA or DNA), and depth (in meters); thus values in each column represent the number of sequences in that sample that belong to a given OTU (OTUs by row). Each row represents a single OTU. The last column lists the taxonomic identifier assigned to each OTU. The raw sequence data can be found in the NCBI SRA database under accession number SRP070577 with the associated BioProject PRJNA311248.\n\ncdm_data_type = Other\nVARIABLES:\nOTU_ID (unitless)\nApril_150m_DNA (unitless)\nJuly_DCM_DNA (unitless)\nApril_890m_DNA (unitless)\nOct_DCM_DNA (unitless)\nOct_150m_DNA (unitless)\nJuly_150m_DNA (unitless)\nApril_150m_cDNA (April 150m C DNA, unitless)\nJuly_150m_cDNA (July 150m C DNA, unitless)\nJan_DCM_DNA (unitless)\nJan_150m_DNA (unitless)\nApril_CAT_DNA (unitless)\nApril_5m_DNA (unitless)\nJuly_POLA_DNA (unitless)\nJuly_CAT_DNA (unitless)\nJuly_5m_DNA (unitless)\nApril_5m_cDNA (April 5m C DNA, unitless)\nJuly_CAT_cDNA (July CAT C DNA, unitless)\nJuly_5m_cDNA (July 5m C DNA, unitless)\nOct_CAT_DNA (unitless)\nApril_CAT_cDNA (April CAT C DNA, unitless)\n... (29 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_748064/index.htmlTable https://www.bco-dmo.org/dataset/748064 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_748064.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_748064&showErrors=false&email= BCO-DMO bcodmo_dataset_748064
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_518508 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_518508.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_518508/ public [Remineralization Experiments] - Experimental results: Remineralization experiments to assess the ability of natural assemblages of bacteria to utilize DOM produced under Si and N limitation (SBDOM project, SBC LTER project) (Mechanisms controlling the production and fate of DOM during diatom blooms) Culture studies of diatoms that dominate spring blooms in the Santa Barbara Channel were used to examine the effects of N and Si stress on the magnitude of production and the chemical composition of DOM (see the BIB Experiments dataset). The ability of natural assemblages of bacteria to utilize DOM produced under Si and N limitation was then assessed using remineralization experiments. Species examined in the remineralization experiments include: Skeletonema marinoi, Chaetoceros socialis, Thalassiosira weissflogii, and Odontella aurita.\n\ncdm_data_type = Other\nVARIABLES:\nspecies (text)\ntreatment (text)\nreplicate (integer)\ntime_point (integer)\ndays_elapsed (number)\nDOC (micromoles per Liter (umol/L))\nDOC_sd (micromoles per Liter (umol/L))\nTDN (micromoles per Liter (umol/L))\nTDN_sd (micromoles per Liter (umol/L))\nNO3_NO2 (micromoles per Liter (umol/L))\nNH4 (micromoles per Liter (umol/L))\nPO4 (Mass Concentration Of Phosphate In Sea Water, micromoles per Liter (umol/L))\ndSi (D Si, micromoles per Liter (umol/L))\nbact_abund_FCM (cells per Liter (cells/L))\nbact_abund_DAPI (cells per Liter (cells/L))\nbact_abund_DAPI_sd (cells per Liter (cells/L))\nbact_prod (picomoles Leucine per Liter per hour (pmol Leu/L/hr))\nbact_prod_sd (picomoles Leucine per Liter per hour (pmol Leu/L/hr))\nspecifc_growth_rate (per day)\nbact_growth_eff (unitless)\nDNA_sampled (yes or no)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_518508/index.htmlTable https://www.bco-dmo.org/dataset/518508 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_518508.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_518508&showErrors=false&email= BCO-DMO bcodmo_dataset_518508
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_718117 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_718117.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_718117/ public [SBDOM11 mini-remineralization expt.] - Dilution batch-culture bioassay (remineralization) experiments from SBDOM11 project cruise from R/V Point Sur PS1103 in the Santa Barbara Channel, May 2011 (SBDOM project, SBC LTER project) (Mechanisms controlling the production and fate of DOM during diatom blooms) This dataset includes results from dilution batch-culture bioassay experiments reporting bacterial abundance, growth rates, barcode sequences and DOC were from the SBDOM 11 cruise in May 2011.\n\ncdm_data_type = Other\nVARIABLES:\nSample (unitless)\nsta_id (unitless)\nbottle (unitless)\nInitiation_date (unitless)\nInitiation_time (unitless)\nTimepoint (unitless)\nDate (unitless)\nDOC_sampling_time (unitless)\nDOC_Bottle_A (micromol/liter)\nDOC_A_st_dev (micromol/liter)\nDOC_Bottle_B (micromol/liter)\nDOC_B_st_dev (micromol/liter)\nBact_abun_sampling_time (unitless)\nBact_abun_A (cells/liter)\nBact_abun_B (cells/liter)\nDNA_sampling_time (unitless)\nPyrosequencing_barcode (unitless)\nmu_growth_A (cells/day)\nmu_growth_B (cells/day)\nBGE_A (unitless)\nBGE_B (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_718117/index.htmlTable https://www.bco-dmo.org/dataset/718117 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_718117.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_718117&showErrors=false&email= BCO-DMO bcodmo_dataset_718117

 
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