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BCO-DMO ERDDAP
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| griddap | Subset | tabledap | Make A Graph | wms | files | Accessible | Title | Summary | FGDC | ISO 19115 | Info | Background Info | RSS | Institution | Dataset ID | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_627835.subset | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_627835 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_627835.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_627835/ | public | [Inferno vent plume proteins-Av1] - Proteins identified from the black smoker chimney Inferno hydrothermal vent plume meta-proteome - replicate Av1 - on the Axial seamount off the coast of Washington in 2011. (Mixotrophic bacteria and the cryptic marine sulfur cycle: Mechanisms of carbon assimilation and sulfur oxidation in the Arctic96BD-19 GSO clade) | Proteins identified in the Inferno hydrothermal vent plume meta-proteome\n(replicate Av1).\\u00a0 Only proteins identified by peptides with a protein\nprobability >0.9 are listed.\\u00a0\n \nThese data are reported as Supplementary Table 3 and discussed in [Mattes et\nal., 2013](\\\\http://dmoserv3.bco-\ndmo.org/data_docs/SulfurOxidizers/Mattes_2013_PlumeProt.pdf\\\\).\n(doi:10.1038/ismej.2013.113)\n \nThe FASTA information in the data was expanded to include the metadata when\nthose FASTA headers were linked to GenBank.\\u00a0\n \nProteins that were identified in biological replicate Av2 that were not\nidentified in biological replicate Av1. (GSO: Gamma Sulfur Oxidizer)\n \n \n \\u00a0\n \n\\u00a0\n \n\\u00a0\n \n\\u00a0\n \n\\u00a0\n \n\\Although fewer proteins were identified in Av2, nearly all (94%) of the\nproteins identified in Av2 were also identified in Av1.\\u00a0 Differences in\nthe total number of proteins identified in replicate samples may result from\ndifferences in the amount of biomass obtained during sample processing.\\\n \nDMO notes: \n Put multiple FASTA entries on separate lines \n Split out one number in FASTA header for linking \n Left it sorted by Total Independent Spectra column \n Added linkage column \n Removed commas in 'consensus annotation' column (signals database to put in\nnew column) \n Reordered columns to put KEGG last -- much longer than any other column\n\ncdm_data_type = Other\nVARIABLES:\nentry (number)\n... (10 more variables)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_627835_fgdc.xml | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_627835_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_627835/index.htmlTable | https://www.bco-dmo.org/dataset/627835
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