BCO-DMO ERDDAP
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https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_785930 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_785930.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_785930/ public [Blue Crab Samples] - Dates and locations of Callinectes blue crab samples from the coastal Atlantic waters of north and south America, Gulf of Mexico and Caribbean from Massachusetts to Uruguay from 2017 to 2021 (Collaborative research: Variation in life history and connectivity as drivers of pathogen-host dynamics and genetic structure in a trans-hemispheric pathosystem) Dates and locations of Callinectes blue crab samples from the coastal Atlantic waters of north and south America, Gulf of Mexico and Caribbean from Massachusetts to Uruguay from 2017 through 2019. Crab populations sampled using methods available to collaborating scientists, managers, and fishermen, as listed in the table.\n\ncdm_data_type = Other\nVARIABLES:\nsample_ID (unitless)\nProject_Identifier (unitless)\nGeo_location_name (unitless)\nlat_lon (Latitude, unitless)\nmonth_and_year (unitless)\nCollaborator (unitless)\nPermitting_info (unitless)\nCollection_method (unitless)\nSample_size (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_785930_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_785930_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_785930/index.htmlTable https://www.bco-dmo.org/dataset/785930 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_785930.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_785930&showErrors=false&email= BCO-DMO bcodmo_dataset_785930
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_753343.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_753343 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_753343.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_753343/ public [ESP 2016 Seq] - Metagenomic, metatranscriptomic, and single cell sequencing data from an Environmental Sample Processor deployment in Monterey Bay, CA in 2016. (Bacterial Taxa that Control Sulfur Flux from the Ocean to the Atmosphere) These metagenomic and metatranscriptomic time-series data cover a 52-day period in the fall of 2016 during an intense bloom of the dinoflagellate Akashiwo sanguinea in Monterey Bay, CA, USA. The dataset comprises 84 metagenomes, 82 metatranscriptomes, and 88 16S rRNA amplicon libraries that capture the functions and taxonomy the bacterial and archaeal community. In addition, 88 18S rRNA amplicon libraries describe the taxonomy of the eukaryotic community during the bloom. Microbial cells were collected at station M0 using the moored autonomous robotic Environmental Sample Processor (ESP) instrument and preserved with RNAlater in the instrument until retrieval.\n\ncdm_data_type = Other\nVARIABLES:\nGOLD_Project_ID (unitless)\nAnalysis_Project_Name (unitless)\nType (unitless)\nAssembly_Method (unitless)\nCollection_Date (unitless)\nInstrument (unitless)\nJGI_Contigs_Link (unitless)\nJGI_Project_ID (unitless)\nJGI_Sample_ID (unitless)\nJGI_Sequencing_Project_ID (unitless)\nJGI_Sequencing_Project_Name (unitless)\nLatitude_and_Longitude (Longitude, unitless)\nNCBI_BioProject_Accession (NCBI Bio Project Accession, unitless)\nNCBI_BioSample_Accession (NCBI Bio Sample Accession, unitless)\nNCBI_Project_ID (unitless)\nNCBI_SRA_Accession_ID (unitless)\nSample_Name (unitless)\nSequencing_Run_Mode (unitless)\nTotal_Bases (unitless)\nVolume_Seawater_Filtered (milliliters (mL))\nenv_biome (unitless)\n... (5 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_753343_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_753343_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_753343/index.htmlTable https://www.bco-dmo.org/dataset/753343 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_753343.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_753343&showErrors=false&email= BCO-DMO bcodmo_dataset_753343
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3470.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3470 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3470.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3470/ public [GT10 - Nanomolar Nutrients - Surface] - PO4, NO3, NO2 surface concentrations along the US GEOTRACES North Atlantic Transect from the R/V Knorr KN199-04, KN199-05 cruises in the subtropical N. Atlantic during 2010 (U.S. GEOTRACES NAT project) (U.S. GEOTRACES North Atlantic Transect) PO4, NO3, NO2 surface concentrations along the US GEOTRACES North Atlantic Transect from the R/V Knorr KN199-04, KN199-05 cruises in the subtropical N. Atlantic during 2010.\n\ncdm_data_type = Other\nVARIABLES:\ncruise_id (text)\nGeoFish_id (Geo Fish Id, integer)\nevent_GEOTRC (dimensionless)\nGeoTraces_ID (Geo Traces ID, integer)\nsample_GEOTRC (dimensionless)\ndate (unitless)\ntime2 (Time, HHMM)\nlatitude (degrees_north)\nlongitude (degrees_east)\nPO4 (Mass Concentration Of Phosphate In Sea Water, nmol/L)\nPO4_Flag (integer)\nNO3 (Mole Concentration Of Nitrate In Sea Water, nmol/L)\nNO3_Flag (integer)\nNO2 (Mole Concentration Of Nitrite In Sea Water, nmol/L)\nNO2_Flag (integer)\nRemarks (text)\ntime (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_3470_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_3470_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3470/index.htmlTable https://www.bco-dmo.org/dataset/3470 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3470.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3470&showErrors=false&email= BCO-DMO bcodmo_dataset_3470
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3842.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3842 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3842.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3842/ public [GT11 - Cruise Event Log] - Scientific sampling event log from R/V Knorr cruise KN204-01 in the Subtropical northern Atlantic Ocean in 2011 (U.S. GEOTRACES NAT project) (U.S. GEOTRACES North Atlantic Transect) Scientific sampling event log from R/V Knorr cruise KN204-01 in the Subtropical northern Atlantic Ocean in 2011 (U.S. GEOTRACES NAT project).\n\ncdm_data_type = Other\nVARIABLES:\ncruise_id (text)\nyear (unitless)\nevent (integer)\nlocation (text)\nevent_description (text)\nGEO_sample_id_range (text)\nmonth_start (mm (01 to 12))\nday_start (dd (01 to 31))\ntime_start (HHMM)\nmonth_end (mm (01 to 12))\nday_end (dd (01 to 31))\ntime_end (HHMM)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndepth (m)\ndepth_max (Depth, meters)\nsamples_taken (text)\ncomment (text)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_3842_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_3842_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3842/index.htmlTable https://www.bco-dmo.org/dataset/3842 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3842.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3842&showErrors=false&email= BCO-DMO bcodmo_dataset_3842
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_747872.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_747872 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_747872.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_747872/ public [Heterosigma akashiwo acclimation] - NCBI accessions of the harmful alga Heterosigma akashiwo (CCMP2393) grown under a range of CO2 concentrations from 200-1000 ppm (Impacts of Evolution on the Response of Phytoplankton Populations to Rising CO2) This dataset includes metadata associated with NCBI BioProject PRJNA377729 \\Impacts of Evolution on the Response of Phytoplankton Populations to Rising CO2\\ PRJNA377729: https://www.ncbi.nlm.nih.gov/bioproject/PRJNA377729. The alga Heterosigma akashiwo was grown at CO2 levels from about 200 to 1000 ppm and then the DNA and RNA were sequenced.\n\ncdm_data_type = Other\nVARIABLES:\nsample_name (unitless)\nsample_title (unitless)\nbioproject_accession (unitless)\norganism (unitless)\nstrain (unitless)\nisolate (unitless)\nhost (unitless)\nisolation_source (unitless)\ntime (Collection Date, seconds since 1970-01-01T00:00:00Z)\ngeo_loc_name (unitless)\nsample_type (unitless)\nbiomaterial_provider (unitless)\ncollected_by (unitless)\ndepth (m)\nenv_biome (unitless)\ngenotype (unitless)\nlat_lon (Latitude, decimal degrees)\npassage_history (unitless)\nsamp_size (unitless)\ntemp_C (degrees Celsius)\nlight_level_umol_m2_s (micromol photons m-2 s-1)\nlight_dark_hr (hours)\nMedia (unitless)\nCO2_ppm (parts per million)\nAlkalinity (micromol per kilogram (umol/kg))\npH (Sea Water Ph Reported On Total Scale, unitless; pH scale)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_747872_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_747872/index.htmlTable https://www.bco-dmo.org/dataset/747872 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_747872.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_747872&showErrors=false&email= BCO-DMO bcodmo_dataset_747872
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_658497.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_658497 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_658497.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_658497/ public [Isolation culturing and sequencing of bacteria and viruses] - Isolation, culturing, and sequencing of bacteria and viruses collected in Canoe Cove, Nahant, MA during 2010 (Marine Bacterial Viruses project) (How can bacterial viruses succeed in the marine environment?) Isolation, culturing, and sequencing of bacteria and viruses collected in Canoe Cove, Nahant, MA during 2010 (Marine Bacterial Viruses project)\n\ncdm_data_type = Other\nVARIABLES:\nbioproject_accession (unitless)\nenv_biome (unitless)\ngeo_loc_name (unitless)\norganism_type (unitless)\ncollection_date (unitless)\nisolation_source (unitless)\nsample_name (unitless)\norganism (unitless)\nstrain (unitless)\nisolate (unitless)\nhost (unitless)\nlab_host (unitless)\nsample_type (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ntemp (Temperature, degrees celsius)\nordinal_day_of_isolation (unitless)\ndescription (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_658497_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_658497_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_658497/index.htmlTable https://www.bco-dmo.org/dataset/658497 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_658497.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_658497&showErrors=false&email= BCO-DMO bcodmo_dataset_658497
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_756997.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_756997 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_756997.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_756997/ public [Microbial community composition of the Cinder Cones Cold Seep] - Microbial community composition from 16s V4 region amplicon sequencing of the methane Seep at the Cinder Cones Cold Seep site, Nov 2016 (EAGER: Elucidating the Antarctic Methane Cycle at the Cinder Cones Reducing Habitat) This dataset includes microbial community composition from 16s V4 region amplicon sequencing on 151 marine sediment community samples collected from the Cinder Cones Cold Seep site [-77.8, 166.666] in the Ross Sea region, Antarctica in November 2016. Data are uploaded to the NCBI Sequence Read Archive under submission SUB2655615 [https://www.ncbi.nlm.nih.gov/bioproject/PRJNA387720] with a subset of the data from that archive originating from this project.\n\ncdm_data_type = Other\nVARIABLES:\naccession (unitless)\nsample_name (unitless)\norganism (unitless)\nhost (unitless)\ntime (Collection Date, seconds since 1970-01-01T00:00:00Z)\ngeo_loc_name (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nReplicate (unitless)\nSediment_Depth_cm (centimeters)\nHabitat (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_756997_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_756997_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_756997/index.htmlTable https://www.bco-dmo.org/dataset/756997 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_756997.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_756997&showErrors=false&email= BCO-DMO bcodmo_dataset_756997
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_770638 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_770638.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_770638/ public [Porewater Composition] - Biogeochemical and sediment characteristics of the Cinder Cones Methane seep site in the Ross Sea from November 2016 (EAGER: Elucidating the Antarctic Methane Cycle at the Cinder Cones Reducing Habitat) These data are samples of pore water collected from a methane seep on Ross Island. This seep had been active for 5 years at the time of sampling and were collected from 10m water depth.\n\ncdm_data_type = Other\nVARIABLES:\nSite_name (unitless)\nHabitat (unitless)\nCollection_Date (unitless)\nDate (unitless)\nlatitude (Geo Loc Lat, degrees_north)\nlongitude (Geo Loc Long, degrees_east)\ndepth (Water Depth, m)\nReplicate (unitless)\nSediment_Depth (centimeters (cm))\nsampling_approach (unitless)\nFluoride (millimole (mmol))\nAcetate (millimole (mmol))\nFormate (millimole (mmol))\nChloride (millimole (mmol))\nNitrite (Mole Concentration Of Nitrite In Sea Water, millimole (mmol))\nBromide (millimole (mmol))\nSulfate (millimole (mmol))\nThiosulfate (millimole (mmol))\nLithium (millimole (mmol))\nSodium (millimole (mmol))\nAmmonium (millimole (mmol))\nPotassium (millimole (mmol))\nMagnesium (millimole (mmol))\nCalcium (millimole (mmol))\nSulfide (millimole (mmol))\nMethane_porewater (nanomole per milliliter of porewater (nmol ml-1 porewater))\n... (4 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_770638_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_770638_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_770638/index.htmlTable https://www.bco-dmo.org/dataset/770638 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_770638.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_770638&showErrors=false&email= BCO-DMO bcodmo_dataset_770638

 
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