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https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_756404.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_756404 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_756404.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_756404/ public [Breviolum antillogorgium microsatellite loci] - Microsatellite loci for Breviolum antillogorgium cultures isolated from the octocoral Antillogorgia bipinnata and used in 2018 growth experiments to compare growth at 26 and 30 degrees C (RUI: Collaborative Research: Genetic variation as a driver of host and symbiont response to increased temperature on coral reefs) Microsatellite loci for Breviolum antillogorgium cultures isolated from the octocoral Antillogorgia bipinnata and used in 2018 growth experiments to compare growth at 26 and 30 degrees C\n\ncdm_data_type = Other\nVARIABLES:\nCulture_ID (Unitless)\nIncubation_Temperature (Degree Celsius)\nHost (Unitless)\nPutative_Species (Unitless)\nLocation (Unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nState_Country (unitless)\nOcean (unitless)\nHost_stage (unitless)\nAxenic (unitless)\nIsolated_by (unitless)\nYear_isolated (unitless)\nITS2_type (Unitless)\ncp_type (base pairs (bp))\nGV_1C (GV 1 C, base pairs (bp))\nB7SYM34 (B7 SYM34, base pairs (bp))\nBYSYM36 (base pairs (bp))\nCA6_38 (base pairs (bp))\nB7SYM4 (B7 SYM4, base pairs (bp))\nB7SYM8 (B7 SYM8, base pairs (bp))\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_756404_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_756404/index.htmlTable https://www.bco-dmo.org/dataset/756404 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_756404.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_756404&showErrors=false&email= BCO-DMO bcodmo_dataset_756404
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_728215.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_728215 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_728215.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_728215/ public [Cultures isolated from A. bipinnata 2008-2016] - Symbiodinium cultures isolated from the octocoral Antillogorgia bipinnata in the Florida Keys and processed at Coffroth lab at the University at Buffalo in 2008, 2013 and 2016 (Host Symbiont Temp Response project) (RUI: Collaborative Research: Genetic variation as a driver of host and symbiont response to increased temperature on coral reefs) Symbiodinium cultures isolated from the octocoral Antillogorgia bipinnata in the Florida Keys and processed at Coffroth lab at the University at Buffalo in 2008, 2013 and 2016.\n\ncdm_data_type = Other\nVARIABLES:\nCulture_ID (unitless)\nIncubation_Temperature (degree Celsius (C))\nHost (unitless)\nPutative_Species (unitless)\nLocation (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nState_Country (unitless)\nOcean (unitless)\nHost_stage (unitless)\nAxenic (unitless)\nIsolated_by (unitless)\nYear_isolated (years)\nClade (unitless)\ncp_type (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_728215_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_728215/index.htmlTable https://www.bco-dmo.org/dataset/728215 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_728215.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_728215&showErrors=false&email= BCO-DMO bcodmo_dataset_728215
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_747872.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_747872 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_747872.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_747872/ public [Heterosigma akashiwo acclimation] - NCBI accessions of the harmful alga Heterosigma akashiwo (CCMP2393) grown under a range of CO2 concentrations from 200-1000 ppm (Impacts of Evolution on the Response of Phytoplankton Populations to Rising CO2) This dataset includes metadata associated with NCBI BioProject PRJNA377729 \\Impacts of Evolution on the Response of Phytoplankton Populations to Rising CO2\\ PRJNA377729: https://www.ncbi.nlm.nih.gov/bioproject/PRJNA377729. The alga Heterosigma akashiwo was grown at CO2 levels from about 200 to 1000 ppm and then the DNA and RNA were sequenced.\n\ncdm_data_type = Other\nVARIABLES:\nsample_name (unitless)\nsample_title (unitless)\nbioproject_accession (unitless)\norganism (unitless)\nstrain (unitless)\nisolate (unitless)\nhost (unitless)\nisolation_source (unitless)\ntime (Collection Date, seconds since 1970-01-01T00:00:00Z)\ngeo_loc_name (unitless)\nsample_type (unitless)\nbiomaterial_provider (unitless)\ncollected_by (unitless)\ndepth (m)\nenv_biome (unitless)\ngenotype (unitless)\nlat_lon (Latitude, decimal degrees)\npassage_history (unitless)\nsamp_size (unitless)\ntemp_C (degrees Celsius)\nlight_level_umol_m2_s (micromol photons m-2 s-1)\nlight_dark_hr (hours)\nMedia (unitless)\nCO2_ppm (parts per million)\nAlkalinity (micromol per kilogram (umol/kg))\npH (Sea Water Ph Reported On Total Scale, unitless; pH scale)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_747872/index.htmlTable https://www.bco-dmo.org/dataset/747872 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_747872.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_747872&showErrors=false&email= BCO-DMO bcodmo_dataset_747872
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_649728 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_649728.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_649728/ public [Host-symbiont reinfections] - Symbiont removed and anemone reinfected with one of two strains of Symbiodinium from (AnemoneOA project) (Ocean Acidification: Understanding the Impact of CO2 and Temperature on the Physiological, Genetic, and Epigenetic Response of a Model Sea Anemone System with Different Symbionts) Symbiont removed and anemone reinfected with one of two strains of Symbiodinium from (AnemoneOA project)\n\ncdm_data_type = Other\nVARIABLES:\nsample (unitless)\nsymbiont_id (text)\nanemone_resp_rate (micromoles of oxygen per hour per milligram protein)\nhost_CS_act (Units per milligram protein)\nsymbiont_CS_act (Units per milligram protein)\nphoto_output_symb (picomoles oxygen per hour per cell)\nsymbio_density (million cells per mg protein)\nsymbio_biomass_fraction (milligrams per milligrams(dimensionless))\nsymbio_resp_fraction (dimensionless)\nresp_biom_quotient (dimensionless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_649728/index.htmlTable https://www.bco-dmo.org/dataset/649728 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_649728.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_649728&showErrors=false&email= BCO-DMO bcodmo_dataset_649728
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_649708 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_649708.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_649708/ public [Host-Symbiont respiration relationship] - Host-symbiont respiration related to symbiont density; anemones from Key Largo from (AnemoneOA project) (Ocean Acidification: Understanding the Impact of CO2 and Temperature on the Physiological, Genetic, and Epigenetic Response of a Model Sea Anemone System with Different Symbionts) Host-symbiont respiration related to symbiont density; anemones from Key Largo from (AnemoneOA project)\n\ncdm_data_type = Other\nVARIABLES:\nsample (unitless)\nholobiont_resp_total (micromoles of oxygen per hour)\nprot_normal_resp (micromoles of oxygen per hour per milligram protein)\nhost_CS_activity_product_total (Units per milligram protein X milligrams)\nhost_CS_activity (units per milligram protein)\ntotal_host_protein (milligrams)\nsymb_CS_activity (Units per milligram protein)\ntotal_anemone_CS_activity (Units)\nhost_DNA_total (micrograms)\nhost_symb_dens_normal (million cells per mg protein)\nsymb_biomass_fraction (dimensionless)\nsymb_respir_fraction (dimensionless)\ngenome_ratio_CO1 (dimensionless)\ngenome_ratio_AT96 (dimensionless)\ngenome_ratio_CO1_Pro (dimensionless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_649708/index.htmlTable https://www.bco-dmo.org/dataset/649708 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_649708.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_649708&showErrors=false&email= BCO-DMO bcodmo_dataset_649708
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_658497.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_658497 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_658497.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_658497/ public [Isolation culturing and sequencing of bacteria and viruses] - Isolation, culturing, and sequencing of bacteria and viruses collected in Canoe Cove, Nahant, MA during 2010 (Marine Bacterial Viruses project) (How can bacterial viruses succeed in the marine environment?) Isolation, culturing, and sequencing of bacteria and viruses collected in Canoe Cove, Nahant, MA during 2010 (Marine Bacterial Viruses project)\n\ncdm_data_type = Other\nVARIABLES:\nbioproject_accession (unitless)\nenv_biome (unitless)\ngeo_loc_name (unitless)\norganism_type (unitless)\ncollection_date (unitless)\nisolation_source (unitless)\nsample_name (unitless)\norganism (unitless)\nstrain (unitless)\nisolate (unitless)\nhost (unitless)\nlab_host (unitless)\nsample_type (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ntemp (Temperature, degrees celsius)\nordinal_day_of_isolation (unitless)\ndescription (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_658497_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_658497/index.htmlTable https://www.bco-dmo.org/dataset/658497 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_658497.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_658497&showErrors=false&email= BCO-DMO bcodmo_dataset_658497
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3889 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3889.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3889/ public [lionfish gnathiid experiments] - Results of experimental field studies, in the Bahamas, Cayman Islands, and Philippines, assessing susceptibility of red lionfish (Pterois volitans) to parasitic gnathiid isopods in both native and introduced ranges in 2009-2011 (Ecological Release and Resistance at Sea: Invasion of Atlantic Coral Reefs by Pacific Lionfish) Results of experimental field studies, in the Bahamas, Cayman Islands, and Philippines, assessing susceptibility of red lionfish (Pterois volitans) to parasitic gnathiid isopods in both native and introduced ranges in 2009-2011.\n\ncdm_data_type = Other\nVARIABLES:\nlocation (text)\nsite (text)\nlatitude (degrees_north)\nlongitude (degrees_east)\nhost_species (text)\nlen_tot (cm)\nlen_fork (cm)\ngnathiid_present (y/n)\ngnathiids_fed (number)\ngnathiids_unfed (number)\ngnathiids_tot (number)\narea_skin (cm^2)\ngnathiid_density (tot. num. gnathiids per cm^2)\nrel_gnathiid_density\navg_gnathiid_density_on_Haemulid\nlionfish_to_Haemulid_gnathiid_density\ndate (unitless)\nblock_no (integer)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_3889_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3889/index.htmlTable https://www.bco-dmo.org/dataset/3889 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3889.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3889&showErrors=false&email= BCO-DMO bcodmo_dataset_3889
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_756997.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_756997 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_756997.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_756997/ public [Microbial community composition of the Cinder Cones Cold Seep] - Microbial community composition from 16s V4 region amplicon sequencing of the methane Seep at the Cinder Cones Cold Seep site, Nov 2016 (EAGER: Elucidating the Antarctic Methane Cycle at the Cinder Cones Reducing Habitat) This dataset includes microbial community composition from 16s V4 region amplicon sequencing on 151 marine sediment community samples collected from the Cinder Cones Cold Seep site [-77.8, 166.666] in the Ross Sea region, Antarctica in November 2016. Data are uploaded to the NCBI Sequence Read Archive under submission SUB2655615 [https://www.ncbi.nlm.nih.gov/bioproject/PRJNA387720] with a subset of the data from that archive originating from this project.\n\ncdm_data_type = Other\nVARIABLES:\naccession (unitless)\nsample_name (unitless)\norganism (unitless)\nhost (unitless)\ntime (Collection Date, seconds since 1970-01-01T00:00:00Z)\ngeo_loc_name (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nReplicate (unitless)\nSediment_Depth_cm (centimeters)\nHabitat (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_756997_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_756997/index.htmlTable https://www.bco-dmo.org/dataset/756997 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_756997.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_756997&showErrors=false&email= BCO-DMO bcodmo_dataset_756997
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_735079 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_735079.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_735079/ public [Sites and symbionts] - Symbiodinium algae in foraminifer and corals in St. John, USVI. (LTREB Long-term coral reef community dynamics in St. John, USVI: 1987-2019) Symbiodinium algae in foraminifer and corals in St. John, USVI.\n\ncdm_data_type = Other\nVARIABLES:\nName_of_Bay (unitless)\nName_of_Site (unitless)\ndepth (Collection Depth, m)\nHost (unitless)\nSample_ID (unitless)\nA3 (count)\nB1 (count)\nC7 (count)\nC12 (count)\nC91 (count)\nD1a (count)\nD2 (count)\nG3_3 (count)\nG3_4 (count)\nF4_8 (count)\nF5_1 (count)\nH1 (count)\nH5 (count)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_735079/index.htmlTable https://www.bco-dmo.org/dataset/735079 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_735079.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_735079&showErrors=false&email= BCO-DMO bcodmo_dataset_735079
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_775451.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_775451 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_775451.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_775451/ public [Sponge holobiont accessions and metadata] - NCBI accessions and metadata associated with Caribbean sponge metagenomes collected from Curacao, Belize, Cayman Islands and St. Croix, 2009 and 2017-2018 (Collaborative Research: Dimensions: Evolutionary Ecology of Sponges and Their Microbiome Drives Sponge Diversity on Coral Reefs) NCBI accessions and metadata associated with Caribbean sponge metagenomes collected from Curacao, Belize, Cayman Islands and St. Croix, 2009 and 2017-2018.\n\ncdm_data_type = Other\nVARIABLES:\nBioProject (Bio Project, unitless)\nBioSample (Bio Sample, unitless)\nSample_name (unitless)\nsample_type (unitless)\nhost (unitless)\ncollection_date (unitless)\ngeographic_location (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nsource_material_identifiers (unitless)\ndepth_ (Depth, feet seawater (fsw) or meters)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_775451_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_775451/index.htmlTable https://www.bco-dmo.org/dataset/775451 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_775451.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_775451&showErrors=false&email= BCO-DMO bcodmo_dataset_775451

 
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