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https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_739077 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_739077.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_739077/ public Accession numbers for raw sequences associated with field collections & microcosms, 2015 and 2016 Accession numbers for raw sequences associated with field collections & microcosms, 2015 and 2016\n\ncdm_data_type = Other\nVARIABLES:\nBioProject (Bio Project, unitless)\nstudy (unitless)\nsample_description (unitless)\nyear (unitless)\nnum_sequences (unitless)\nNCBI_link (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_739077_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_739077/index.htmlTable https://www.bco-dmo.org/dataset/739077 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_739077.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_739077&showErrors=false&email= BCO-DMO bcodmo_dataset_739077
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_549122.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_549122 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_549122.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_549122/ public Cellular elemental content of individual phytoplankton cells collected during US GEOTRACES North Atlantic Transect cruises in the Subtropical western and eastern North Atlantic Ocean during Oct and Nov, 2010 and Nov. 2011 Individual phytoplankton cells were collected on the GEOTRACES North Atlantic\nTransect cruises were analyzed for elemental content using SXRF (Synchrotron\nradiation X-Ray Fluorescence). Carbon was calculated from biovolume using the\nrelationships of Menden-Deuer & Lessard (2000). Trace metal concentrations are\nreported.\n \nDownload zipped images:  \n[Chlorophyll](\\\\http://data.bco-dmo.org/GEOTRACES/Twining/Chl_image.zip\\\\)  \n[Light](\\\\http://data.bco-dmo.org/GEOTRACES/Twining/Light_image.zip\\\\)  \n[SXRF maps](\\\\http://data.bco-dmo.org/GEOTRACES/Twining/SXRF_map.zip\\\\)  \n[SXRF spectra](\\\\http://data.bco-\ndmo.org/GEOTRACES/Twining/SXRF_spectra.zip\\\\)\n \nRelated references:\n \nMenden-Deuer, S. and E. J. Lessard (2000). Carbon to volume relationships for\ndinoflagellates, diatoms, and other protist plankton. Limnology and\nOceanography 45(3): 569-579.\n \n* Twining, B. S., S. Rauschenberg, P. L. Morton, and S. Vogt. 2015. Metal contents of phytoplankton and labile particulate material in the North Atlantic Ocean. Progress in Oceanography 137: 261-283.)\n\ncdm_data_type = Other\nVARIABLES:\ncruise_id (unitless)\nproject (unitless)\nstation_GEOTRC (unitless)\nsta_PI (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\n... (28 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_549122_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_549122/index.htmlTable https://www.bco-dmo.org/dataset/549122 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_549122.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_549122&showErrors=false&email= BCO-DMO bcodmo_dataset_549122
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_785930 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_785930.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_785930/ public Dates and locations of Callinectes blue crab samples from the coastal Atlantic waters of north and south America, Gulf of Mexico and Caribbean from Massachusetts to Uruguay from 2017 through 2019 Dates and locations of Callinectes blue crab samples from the coastal Atlantic waters of north and south America, Gulf of Mexico and Caribbean from Massachusetts to Uruguay from 2017 through 2019. Crab populations sampled using methods available to collaborating scientists, managers, and fishermen, as listed in the table.\n\ncdm_data_type = Other\nVARIABLES:\nsample_ID (unitless)\nProject_Identifier (unitless)\nGeo_location_name (unitless)\nlat_lon (Latitude, unitless)\nmonth_and_year (unitless)\nCollaborator (unitless)\nPermitting_info (unitless)\nCollection_method (unitless)\nSample_size (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_785930_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_785930/index.htmlTable https://www.bco-dmo.org/dataset/785930 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_785930.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_785930&showErrors=false&email= BCO-DMO bcodmo_dataset_785930
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_775229.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_775229 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_775229.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_775229/ public Diel, daily, and spatial variation of coral reef seawater microbial communities from US Virgin Islands, 2017 Bacterial and archaeal diversity and composition, microbial cell abundances, inorganic nutrient concentrations, and physicochemical conditions were determined and measured in coral reef seawater over a three-day, diel time series on one reef in St. John, U.S. Virgin Islands.\n\ncdm_data_type = Other\nVARIABLES:\nSample_ID (unitless)\nNCBI_BioProject_accession_number (NCBI Bio Project Accession Number, unitless)\nNCBI_BioSample_accession_number (NCBI Bio Sample Accession Number, unitless)\nSample_type (unitless)\nCoral_Colony_or_sand (unitless)\nCollection_time (unitless)\nCollection_Date (unitless)\nCollection_location (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nProchlorococcus_cells_mL (Prochlorococcus Cells M L, cell/milliliter)\nSynechococcus_cells_mL (Synechococcus Cells M L, cell/milliliter)\nPicoeukaryotes_cells_mL (Picoeukaryotes Cells M L, cell/milliliter)\nUnpigmented_cells_cells_mL (Unpigmented Cells Cells M L, cell/milliliter)\nPhosphate_uM (Mass Concentration Of Phosphate In Sea Water, micromoles)\nSilicate_uM (Mass Concentration Of Silicate In Sea Water, micromoles)\nNitrate_uM (Mole Concentration Of Nitrate In Sea Water, micromoles)\nNitrite_uM (Mole Concentration Of Nitrite In Sea Water, micromoles)\nAmmonium_uM (Mole Concentration Of Ammonium In Sea Water, micromoles)\nTemperature_F (degrees Fahrenheit)\nDepth_Feet (Depth, feet)\nRelative_light_levels (lumens/foot^2)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_775229_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_775229/index.htmlTable https://www.bco-dmo.org/dataset/775229 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_775229.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_775229&showErrors=false&email= BCO-DMO bcodmo_dataset_775229
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_768550.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_768550 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_768550.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_768550/ public DYEatom Metatranscriptome metadata from RV/Point Sur cruise PS1312 in the Monterey Bay area, June-July 2013 Metadata for assembled contigs and ORFS from metatranscriptome analysis from CTD casts in the Monterey Bay area on RV/Point Sur cruise PS1312, June-July 2013. Assembled contigs files are also available; see Supplemental Files.\n\ncdm_data_type = Other\nVARIABLES:\nBioProject_type (Bio Project Type, unitless)\nBioProject_id (Bio Project Id, unitless)\nBioSample (Bio Sample, unitless)\nSample_name (unitless)\nSRA_id (unitless)\nPackage_type (unitless)\nversion (unitless)\nAccession (unitless)\nID (unitless)\ncruise_id (unitless)\nCTD_cast (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nDate_collection (unitless)\nstation (unitless)\ndepth (m)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_768550_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_768550/index.htmlTable https://www.bco-dmo.org/dataset/768550 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_768550.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_768550&showErrors=false&email= BCO-DMO bcodmo_dataset_768550
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_783679.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_783679 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_783679.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_783679/ public Flow cytometry and nutrient analyses data from a tidal study over 48 hours of mangrove, seagrass, and seawater from the US Virgin Islands in July of 2017 Data from a tidal study over 48 hours of mangrove, seagrass, and seawater from the US Virgin Islands in 2017.  These data include tidal height, depth, temperature, salinity, Prochlorococcus counts, Synechococcus counts, Picoeukaryote abundances, nutrient concentrations at accession numbers for sequences at The National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA).\n\ncdm_data_type = Other\nVARIABLES:\nSample_ID (unitless)\nNCBI_BioProject_accession_number (NCBI Bio Project Accession Number, unitless)\nNCBI_BioSample_accession_number (NCBI Bio Sample Accession Number, unitless)\nSample_type (unitless)\nSequencing_Strategy (unitless)\nSequencing_Instrument_model (unitless)\nSequencing_strategy (unitless)\nSite_Name (unitless)\nBiome (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nCollection_Date (unitless)\nCollection_Time (unitless)\ntime (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)\nTide (unitless)\nTide_Height (Sea Surface Height, meters (m))\nTime_elapsed_between_tide_timepoint_and_collection (Sea Surface Height, minutes)\ndepth (Collection Depth, m)\nSite_Depth (meters (m))\nTemperature (degrees Celsius (ºC))\nSalinity (Sea Water Practical Salinity, Practical Salinity Units (PSU))\nProchlorococcus (cells per milliliter (cells/ml))\nSynechococcus (cells per milliliter (cells/ml))\n... (7 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_783679_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_783679/index.htmlTable https://www.bco-dmo.org/dataset/783679 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_783679.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_783679&showErrors=false&email= BCO-DMO bcodmo_dataset_783679
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_526852 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_526852.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_526852/ public Jellyfish Database Initiative: Global records on gelatinous zooplankton for the past 200 years, collected from global sources and literature (Trophic BATS project) The Jellyfish Database Initiative (JeDI) is a scientifically-coordinated global database dedicated to gelatinous zooplankton (members of the Cnidaria, Ctenophora and Thaliacea) and associated environmental data. The database holds 476,000 quantitative, categorical, presence-absence and presence only records of gelatinous zooplankton spanning the past four centuries (1790-2011) assembled from a variety of published and unpublished sources. Gelatinous zooplankton data are reported to species level, where identified, but taxonomic information on phylum, family and order are reported for all records. Other auxiliary metadata, such as physical, environmental and biometric information relating to the gelatinous zooplankton metadata, are included with each respective entry. JeDI has been developed and designed as an open access research tool for the scientific community to quantitatively define the global baseline of gelatinous zooplankton populations and to describe long-term and large-scale trends in gelatinous zooplankton populations and blooms. It has also been constructed as a future repository of datasets, thus allowing retrospective analyses of the baseline and trends in global gelatinous zooplankton populations to be conducted in the future.\n\ncdm_data_type = Other\nVARIABLES:\nproject_title (dimensionless)\nsub_project_title (dimensionless)\nowner_dataset (dimensionless)\ncontact (dimensionless)\nlocation_name (dimensionless)\ndate (variable)\nyear (unitless)\nmonth (MM)\nday (DD)\ntime_local (HH:MM:SS)\nlatitude (degrees_north)\nlongitude (degrees_east)\ntaxon (dimensionless)\nrank_phylum (dimensionless)\n... (23 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_526852_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_526852/index.htmlTable https://www.bco-dmo.org/dataset/526852 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_526852.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_526852&showErrors=false&email= BCO-DMO bcodmo_dataset_526852
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_753343.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_753343 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_753343.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_753343/ public Metagenomic, metatranscriptomic, and single cell sequencing data from an Environmental Sample Processor deployment in Monterey Bay, CA in 2016. These metagenomic and metatranscriptomic time-series data cover a 52-day period in the fall of 2016 during an intense bloom of the dinoflagellate Akashiwo sanguinea in Monterey Bay, CA, USA. The dataset comprises 84 metagenomes, 82 metatranscriptomes, and 88 16S rRNA amplicon libraries that capture the functions and taxonomy the bacterial and archaeal community. In addition, 88 18S rRNA amplicon libraries describe the taxonomy of the eukaryotic community during the bloom. Microbial cells were collected at station M0 using the moored autonomous robotic Environmental Sample Processor (ESP) instrument and preserved with RNAlater in the instrument until retrieval.\n\ncdm_data_type = Other\nVARIABLES:\nGOLD_Project_ID (unitless)\nAnalysis_Project_Name (unitless)\nType (unitless)\nAssembly_Method (unitless)\nCollection_Date (unitless)\nInstrument (unitless)\nJGI_Contigs_Link (unitless)\nJGI_Project_ID (unitless)\nJGI_Sample_ID (unitless)\nJGI_Sequencing_Project_ID (unitless)\nJGI_Sequencing_Project_Name (unitless)\nLatitude_and_Longitude (Longitude, unitless)\nNCBI_BioProject_Accession (NCBI Bio Project Accession, unitless)\nNCBI_BioSample_Accession (NCBI Bio Sample Accession, unitless)\nNCBI_Project_ID (unitless)\nNCBI_SRA_Accession_ID (unitless)\nSample_Name (unitless)\nSequencing_Run_Mode (unitless)\nTotal_Bases (unitless)\nVolume_Seawater_Filtered (milliliters (mL))\nenv_biome (unitless)\n... (5 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_753343_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_753343/index.htmlTable https://www.bco-dmo.org/dataset/753343 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_753343.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_753343&showErrors=false&email= BCO-DMO bcodmo_dataset_753343
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_775451.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_775451 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_775451.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_775451/ public NCBI accessions and metadata associated with Caribbean sponge metagenomes collected from Curacao, Belize, Cayman Islands and St. Croix, 2009 and 2017-2018 NCBI accessions and metadata associated with Caribbean sponge metagenomes collected from Curacao, Belize, Cayman Islands and St. Croix, 2009 and 2017-2018.\n\ncdm_data_type = Other\nVARIABLES:\nBioProject (Bio Project, unitless)\nBioSample (Bio Sample, unitless)\nSample_name (unitless)\nsample_type (unitless)\nhost (unitless)\ncollection_date (unitless)\ngeographic_location (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nsource_material_identifiers (unitless)\ndepth_ (Depth, feet seawater (fsw) or meters)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_775451_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_775451/index.htmlTable https://www.bco-dmo.org/dataset/775451 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_775451.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_775451&showErrors=false&email= BCO-DMO bcodmo_dataset_775451
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_680935.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_680935 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_680935.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_680935/ public Quantitative PCR data from samples collected on the R/V Sarmiento de Gamboa cruise in the subtropical North Atlantic Ocean between January and March 2011 (Microbial associations in zooplankton project) Quantitative PCR data from samples collected on the R/V Sarmiento de Gamboa cruise in the subtropical North Atlantic Ocean between January and March 2011 (Microbial associations in zooplankton project)\n\ncdm_data_type = Other\nVARIABLES:\nproject (unitless)\ndate (unitless)\ntime2 (Time, unitless)\nstation (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nnumber (unitless)\nsize_fraction (microns)\nUCYN_A (genes per liter)\nGamma_24774A11 (Gamma 24774 A11, genes per liter)\ngroup_B (genes per liter)\nTricho (genes per liter)\nHet1 (genes per liter)\ntime (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_680935_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_680935/index.htmlTable https://www.bco-dmo.org/dataset/680935 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_680935.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_680935&showErrors=false&email= BCO-DMO bcodmo_dataset_680935
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_658340.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_658340 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_658340/ public Sample numbers, barcode information, primer information and project name from bacteria samples collected in the Caribbean during 2013 (Contagious coral diseases project) Sample numbers, barcode information, primer information and project name from bacteria samples collected in the Caribbean during 2013 (Contagious coral diseases project)\n\ncdm_data_type = Other\nVARIABLES:\nproject_name (unitless)\nlinker_primer_sequence (unitless)\nsample_id (unitless)\nbarcode_sequence (unitless)\nbarcode_name (unitless)\ndescription (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_658340_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_658340/index.htmlTable https://www.bco-dmo.org/dataset/658340 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_658340.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_658340&showErrors=false&email= BCO-DMO bcodmo_dataset_658340
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3684.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3684 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3684.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3684/ public Scientific sampling event logs from two cruises/trips at the Richard B Gump Research Station at Moorea LTER in 2010 and 2011 (MCR LTER and Coral DOM projects) Scientific sampling event logs recorded during the MCR10-1 cruise/trip (the Coral DOM 2010 Research Campaign) and the MCR11-1 cruise/trip (the Coral DOM 2011 Research Campaign) at the Richard B Gump Research Station at the Moorea Coral Reef LTER site.\n\ncdm_data_type = Other\nVARIABLES:\ncruiseid (dimensionless)\nyear (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nevent (dimensionless)\nproject_code (dimensionless)\nsite_ID (dimensionless)\nactivity (dimensionless)\nsample_desig (dimensionless)\ndate_local (mm/dd/yy)\ntime_start_local (HHMM)\ntime_end_local (HHMM)\ntime (ISO Date Time Start UTC, seconds since 1970-01-01T00:00:00Z)\nsi (dimensionless)\ncomment (dimensionless)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_3684_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3684/index.htmlTable https://www.bco-dmo.org/dataset/3684 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3684.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3684&showErrors=false&email= BCO-DMO bcodmo_dataset_3684

 
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