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https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_775229.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_775229 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_775229.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_775229/ public [Coral reef seawater microbial communities] - Diel, daily, and spatial variation of coral reef seawater microbial communities from US Virgin Islands, 2017 (Signature exometabolomes of Caribbean corals and influences on reef picoplankton) Bacterial and archaeal diversity and composition, microbial cell abundances, inorganic nutrient concentrations, and physicochemical conditions were determined and measured in coral reef seawater over a three-day, diel time series on one reef in St. John, U.S. Virgin Islands.\n\ncdm_data_type = Other\nVARIABLES:\nSample_ID (unitless)\nNCBI_BioProject_accession_number (NCBI Bio Project Accession Number, unitless)\nNCBI_BioSample_accession_number (NCBI Bio Sample Accession Number, unitless)\nSample_type (unitless)\nCoral_Colony_or_sand (unitless)\nCollection_time (unitless)\nCollection_Date (unitless)\nCollection_location (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nProchlorococcus_cells_mL (Prochlorococcus Cells M L, cell/milliliter)\nSynechococcus_cells_mL (Synechococcus Cells M L, cell/milliliter)\nPicoeukaryotes_cells_mL (Picoeukaryotes Cells M L, cell/milliliter)\nUnpigmented_cells_cells_mL (Unpigmented Cells Cells M L, cell/milliliter)\nPhosphate_uM (Mass Concentration Of Phosphate In Sea Water, micromoles)\nSilicate_uM (Mass Concentration Of Silicate In Sea Water, micromoles)\nNitrate_uM (Mole Concentration Of Nitrate In Sea Water, micromoles)\nNitrite_uM (Mole Concentration Of Nitrite In Sea Water, micromoles)\nAmmonium_uM (Mole Concentration Of Ammonium In Sea Water, micromoles)\nTemperature_F (degrees Fahrenheit)\nDepth_Feet (Depth, feet)\nRelative_light_levels (lumens/foot^2)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_775229_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_775229_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_775229/index.htmlTable https://www.bco-dmo.org/dataset/775229 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_775229.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_775229&showErrors=false&email= BCO-DMO bcodmo_dataset_775229
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_666201 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_666201.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_666201/ public [Diatom growth rates] - Diatom growth rates from samples collected on the Gould cruise LMG1411 in the Western Antarctica Peninsula from 2014 (Polar Transcriptomes project) (Iron and Light Limitation in Ecologically Important Polar Diatoms: Comparative Transcriptomics and Development of Molecular Indicators) Diatom growth rates from samples collected on the Gould cruise LMG1411 in the Western Antarctica Peninsula from 2014 (Polar Transcriptomes project)\n\ncdm_data_type = Other\nVARIABLES:\nspecies (unitless)\ntreatment (unitless)\nmean_specific_u (d -1)\nrelative_u (unitless)\nstd_error_u (unitless)\npropogation_error_u (unitless)\nsample_size_u (unitless)\nmean_FvFm (Mean Fv Fm, unitless)\nrelative_FvFm (Relative Fv Fm, unitless)\nstd_error_FvFm (Std Error Fv Fm, unitless)\npropogation_error_FvFm (Propogation Error Fv Fm, unitless)\nsample_size_FvFm (Sample Size Fv Fm, unitless)\nmean_sigma (A2 quanta -1)\nrelative_sigma (unitless)\nstd_error_sigma (unitless)\npropogation_error_sigma (unitless)\nsample_size_sigma (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_666201_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_666201/index.htmlTable https://www.bco-dmo.org/dataset/666201 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_666201.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_666201&showErrors=false&email= BCO-DMO bcodmo_dataset_666201
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_783873 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_783873.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_783873/ public [Diel proteomes Trichodesmium IMS101] - Diel proteomes of cultured Trichodesmium erythraeum sp. IMS101 from laboratory experiments conducted in November of 2018 (New technology for high resolution analysis of proteins and other organic materials produced by marine microorganisms) Diel proteomes of cultured Trichodesmium erythraeum sp. IMS101 from laboratory experiments conducted in November of 2018.\n\ncdm_data_type = Other\nVARIABLES:\nprotein_name (unitless)\nhours_post_dawn (hours)\ncnratio (dimensionless)\nrelative_protein_abundance (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_783873_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_783873/index.htmlTable https://www.bco-dmo.org/dataset/783873 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_783873.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_783873&showErrors=false&email= BCO-DMO bcodmo_dataset_783873
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_767048 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_767048.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_767048/ public [DON_Oxidation] - Dissolved Organic Nitrogen oxidation collected on cruise SAV 17-16 in the South Atlantic Bight aboard the R/V Savannah from 2011 to 2017 (Collaborative Research: Direct Oxidation of Organic Nitrogen by Marine Ammonia Oxidizing Organisms) This dataset contains the results of analyses related to ammonia oxidation rates, including oxidation rates of 15N supplied as ammonia, urea, 1,2 diamino ethane, 1,3 diamino propane, 1,4 diamino butane (putrescine), arginine and glutamate. Ancillary data including nutrient concentrations and the abundance of ammonia- and nitrite-oxidizing microorganisms are also reported. The samples analyzed to produce the dataset were collected off the coast of Georgia, USA. Most data were collected on one cruise in August 2017, incidental data from 2011, 2013 and 2016 are also reported.\n\ncdm_data_type = Other\nVARIABLES:\nCruise_ID (unitless)\nSta (unitless)\nRegion (unitless)\ndepth (m)\nlongitude (degrees_east)\nlatitude (degrees_north)\nlatitude2 (Latitude, degrees and decimal minutes N)\nlongitude2 (Longitude, degrees and decimal minutes W)\nDate (unitless)\nISO_Date (unitless)\nBacterial_16S_rRNA (Bacterial 16 S R RNA, copies per liter filtered)\nThaumarchaeal_16S_rRNA (Thaumarchaeal 16 S R RNA, copies per liter filtered)\nWCA_amoA (WCA Amo A, copies per liter filtered)\nWCB_amoA (WCB Amo A, copies per liter filtered)\nNitrospina_16S_rRNA (Nitrospina 16 S R RNA, copies per liter filtered)\nN15_added (nanomoles per liter)\nAmmonia_Oxidation (nanomoles per liter per day)\nAmmonia_Oxidation_sd (nanomoles per liter per day)\nN15_ox_from_PUT (nanomoles per liter per day)\nN15_ox_from_PUT_sd (nanomoles per liter per day)\nN15_ox_from_GLU (nanomoles per liter per day)\n... (21 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_767048_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_767048_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_767048/index.htmlTable https://www.bco-dmo.org/dataset/767048 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_767048.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_767048&showErrors=false&email= BCO-DMO bcodmo_dataset_767048
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_719379.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_719379 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_719379.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_719379/ public [Fatty acid profiles] - Fatty acid profiles of M. menidia females and their unfertilized eggs. (Collaborative research: Understanding the effects of acidification and hypoxia within and across generations in a coastal marine fish) Gas chromatography was used to quantify the absolute (mg g dry weight-1) and\nrelative concentrations (% of total) of 27 FAs for each of 5 females (whole\nindividual) and their unfertilized eggs (~ 1 ml). Samples were first dried and\nthen homogenized in a solution of chloroform-methanol (2:1 v/v) and\ntricosanoic acid (23:0) as an internal standard for quantification of mg\ng\\u22121\\u00a0dry mass of fatty acids. Lipids were cold-extracted from\napproximately 50 mg of dry mass. A Shimadzu GC-2014 gas chromatograph set with\na Phenomenex ZB-WAX plus capillary column (30\\u00a0m long; 0.53 mm ID; 1.0 um\nthick) was used to quantify FAs, and individual FAs were identified by\ncomparison to commercial standards (Supelco, Inc).\\u00a0\n \nThese data are\\u00a0associated with the corresponding paper:\n \n[Snyder, J.T.*, Murray, C.S.*, and Baumann, H. (2017) Potential for maternal\neffects on offspring CO2-sensitivities in a coastal marine fish. Journal of\nExperimental Marine Biology and Ecology (in\npress).](\\\\https://doi.org/10.1016/j.jembe.2017.11.002\\\\)\n \nOther datasets related to this paper:\n \n[Survival, length, and growth responses of M. menidia offspring from different\nfemales exposed to contrasting CO2 environments.](\\\\https://www.bco-\ndmo.org/dataset/719420\\\\)\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\nCollection_site (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nCollection_date (unitless)\n... (6 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_719379_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_719379_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_719379/index.htmlTable https://www.bco-dmo.org/dataset/719379 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_719379.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_719379&showErrors=false&email= BCO-DMO bcodmo_dataset_719379
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_809321 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_809321.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_809321/ public [Rockfish hypoxia experiments] - Data from experiments testing the effects of hypoxia on behavior and physiology of two species of rockfish from from 2015-2016 (Collaborative Research: Ocean Acidification: RUI: Multiple Stressor Effects of Ocean Acidification and Hypoxia on Behavior, Physiology, and Gene Expression of Temperate Reef Fishes) This study investigated the effects of hypoxia on the behavior and physiology of juvenile rockfishes in a controlled laboratory setting to test how deoxygenation may impact early life stages of common temperate reef fishes. Juvenile rockfishes were collected from shallow rocky reef and kelp forest habitats at Stillwater Cove, central California (36\\u02da 34' N, 121\\u02da 56' W) during May-June of 2015. Newly settled copper (Sebastes caurinus) and blue (Sebastes mystinus) rockfish were reared in the laboratory under across a range of oxygen concentrations. Juvenile rockfishes were exposed to one of four dissolved oxygen treatment levels corresponding to conditions that currently occur or are predicted to occur in the future on the central California coast: 100% saturation (8.74 \\u00b1 0.03 mg O2 L-1), 68% saturation (6.00 \\u00b1 0.04 mg O2 L-1), 46% saturation (4.06 \\u00b1 0.04 mg O2 L-1), or 26% saturation (2.25 \\u00b1 0.05 mg O2 L-1), with two replicate tanks per treatment level. Behavior and physiological trials were conducted on each individual to test how each species responds to declining oxygen levels, including (1) escape response, (2) behavioral lateralization, (3) standard metabolic rate, (4) maximum metabolic rate, (5) aerobic scope, (6) pCrit (i.e., hypoxia tolerance test), and (7) ventilation rate. These data are published in Mattiasen et al. (2020).\n\ncdm_data_type = Other\nVARIABLES:\nFish_ID (unitless)\nSpecies (unitless)\nOxygen_treatment_mg_per_L (milligrams O2 per liter (mg/L))\nTank_Replicate (unitless)\nInitial_Standard_Length_mm (millimeters (mm))\nInitial_Total_Length_mm (millimeters (mm))\nInitial_Weight_g (grams (g))\nDate_entered_into_experimental_treatments (unitless)\nDate_at_end_of_experiment (unitless)\nFinal_Standard_Length_mm (millimeters (mm))\nFinal_Total_Length_mm (millimeters (mm))\nFinal_Weight_g (grams (g))\nEscape_Time_seconds (seconds)\n... (7 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_809321_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_809321/index.htmlTable https://www.bco-dmo.org/dataset/809321 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_809321.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_809321&showErrors=false&email= BCO-DMO bcodmo_dataset_809321

 
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