Accessing BCO-DMO data
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BCO-DMO ERDDAP
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| griddap | Subset | tabledap | Make A Graph | wms | files | Accessible | Title | Summary | ISO 19115 | Info | Background Info | RSS | Institution | Dataset ID | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_684362 | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_684362/ | public | Culture-independent identification of bacteria present in the pressure-retaining seawater (PRS) sampler deployed during Leggo drop 1 from R/V Falkor cruise FK141215 in the Challenger Deep, Mariana Trench in December 2014 | Culture-independent identification of bacteria present in the pressure-retaining seawater (PRS) sampler deployed during Leggo drop 1.\n\ncdm_data_type = Other\nVARIABLES:\nSILVA_classification (unitless)\npartial_16S_seq (Partial 16 S Seq, unitless)\n | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_684362_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_684362/index.htmlTable | https://www.bco-dmo.org/dataset/684362
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_684362.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_684362&showErrors=false&email= | BCO-DMO | bcodmo_dataset_684362 | ||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3895 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3895.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3895/ | public | Event logs from R/V Oceanus, R/V Endeavor cruises OC468-02, EN496, EN509, EN510 in the Gulf of Mexico; 2010-2012 (GoMX - N2 Fixation project) | Event logs from R/V Oceanus, R/V Endeavor cruises OC468-02, EN496, EN509, EN510 in the Gulf of Mexico; 2010-2012 (GoMX - N2 Fixation project)\n\ncdm_data_type = Other\nVARIABLES:\nCruiseId (Cruise Id, text)\nOp_Number (unitless)\nStn (dimensionless)\nEvt (dimensionless)\nDate_Local (unitless)\nTime_Local (unitless)\ntime (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)\nLatitude_Deg_N (Latitude, whole degrees)\nLatitude_Min_N (Latitude, decimal minutes)\nLongitude_Deg_W (Longitude, whole degrees)\nLongitude_Min_W (Longitude, decimal minutes)\nlatitude (degrees_north)\nlongitude (degrees_east)\nLease_Block (text)\nOperation (text)\nSeq_Number (dimensionless)\nNotes (text)\n | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_3895_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3895/index.htmlTable | https://www.bco-dmo.org/dataset/3895
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3895.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3895&showErrors=false&email= | BCO-DMO | bcodmo_dataset_3895 | |||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_627835.subset | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_627835 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_627835.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_627835/ | public | Proteins identified from the black smoker chimney Inferno hydrothermal vent plume meta-proteome - replicate Av1 - on the Axial seamount off the coast of Washington in 2011. | Proteins identified in the Inferno hydrothermal vent plume meta-proteome\n(replicate Av1).\\u00a0 Only proteins identified by peptides with a protein\nprobability >0.9 are listed.\\u00a0\n \nThese data are reported as Supplementary Table 3 and discussed in [Mattes et\nal., 2013](\\\\http://dmoserv3.bco-\ndmo.org/data_docs/SulfurOxidizers/Mattes_2013_PlumeProt.pdf\\\\).\n(doi:10.1038/ismej.2013.113)\n \nThe FASTA information in the data was expanded to include the metadata when\nthose FASTA headers were linked to GenBank.\\u00a0\n \nProteins that were identified in biological replicate Av2 that were not\nidentified in biological replicate Av1. (GSO: Gamma Sulfur Oxidizer)\n \n \n \\u00a0\n \n\\u00a0\n \n\\u00a0\n \n\\u00a0\n \n\\u00a0\n \n\\Although fewer proteins were identified in Av2, nearly all (94%) of the\nproteins identified in Av2 were also identified in Av1.\\u00a0 Differences in\nthe total number of proteins identified in replicate samples may result from\ndifferences in the amount of biomass obtained during sample processing.\\\n \nDMO notes: \n Put multiple FASTA entries on separate lines \n Split out one number in FASTA header for linking \n Left it sorted by Total Independent Spectra column \n Added linkage column \n Removed commas in 'consensus annotation' column (signals database to put in\nnew column) \n Reordered columns to put KEGG last -- much longer than any other column\n\ncdm_data_type = Other\nVARIABLES:\nentry (number)\n... (10 more variables)\n | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_627835_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_627835/index.htmlTable | https://www.bco-dmo.org/dataset/627835
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_627835.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_627835&showErrors=false&email= | BCO-DMO | bcodmo_dataset_627835 |