Accessing BCO-DMO data
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BCO-DMO ERDDAP
Accessing BCO-DMO data |
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| griddap | Subset | tabledap | Make A Graph | wms | files | Accessible | Title | Summary | FGDC | ISO 19115 | Info | Background Info | RSS | Institution | Dataset ID | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_998957_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_998957_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_998957_v1/ | public | [Metagenome from Gulf of Mexico] - Sample information for the metagenomes from the Gulf of Mexico collected on R/V Endeavor cruise EN509 in May 2012 (Collaborative Research: Microdiversity drives ecosystem function: SAR11 bacteria as models for oceanic nitrogen loss) | This dataset includes sample information for the metagenomes from the Gulf of Mexico used in the Conrad et al. AEM 2026 study. Water samples were collected during CTD casts from the May 2012 R/V Endeavour cruise EN509 and shotgun metagenomes were sequenced from the surface (~3 meters (m)), the mixed layer (ML; 15-25m), the deep chlorophyll maximum (DCM; 70-90m), below the DCM but above the oxygen minimum zone (OMZ; 100-150m), and the OMZ (200-400m) from three stations in the northwest Gulf of Mexico on an Illumina MiSeq sequencer available at the Molecular Core of Georgia Tech. Raw sequences are available in the National Center for Biotechnology Information (NCBI) under BioProject number PRJNA291283.\n\ncdm_data_type = Other\nVARIABLES:\nAcession (unitless)\nSample_Name (unitless)\nVessel (unitless)\nCruise (unitless)\nOcean (unitless)\nDate (unitless)\nYear (unitless)\nMonth (unitless)\nDay (unitless)\nStation (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nDescription (unitless)\ndepth (m)\nTemp (degrees Celsius)\nSalinity (PSU)\nDensity (sigma theta)\nFluoresence (milligrams per cubic meter (mg/m^3))\nOxygen (micromolar (uM))\nXmiss (ranging 0-100%.)\n... (18 more variables)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_998957_v1_fgdc.xml | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_998957_v1_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_998957_v1/index.htmlTable | https://osprey.bco-dmo.org/dataset/998957
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_998957_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_998957_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_998957_v1 |