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BCO-DMO ERDDAP
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| griddap | Subset | tabledap | Make A Graph | wms | files | Accessible | Title | Summary | FGDC | ISO 19115 | Info | Background Info | RSS | Institution | Dataset ID | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_986127_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_986127_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_986127_v1/ | public | [Proteomic analysis of Alteromonas macleodii exudates] - Proteomic analysis of Alteromonas macleodii exudates (Collaborative Research: Extracellular vesicles as vehicles for microbial interactions in marine Black Queen communities) | The cyanobacterium Prochlorococcus has a conspicuously reduced genome causing it to require help from co-existing organisms for survival under a variety of stressful conditions. In this work we used conditioned media experiments to demonstrate that exudates of the heterotrophic bacterium Alteromonas macleodii EZ55 facilitated the survival of Prochlorococcus MIT9312 batch co-cultures as they entered stationary phase. Based on mass spectrometry analysis, Alteromonas exudates contained a wide variety of proteins. These proteins were significantly different between exudates and whole-cell lysates, suggesting they represented programmatic release instead of simple lysis. Moreover, the composition of exudates changed after 500 generations of adaptation to co-culture with Prochlorococcus, suggesting genetic regulation of protein release.\n\ncdm_data_type = Other\nVARIABLES:\nAccession (unitless)\nKO (unitless)\nName (unitless)\nMW (daltons (Da))\nLocalization (unitless)\nScore (unitless)\nLTPE26_Supernatant (unitless)\nLTPE397_Supernatant (unitless)\nLTPE403_Supernatant (unitless)\nLTPE26_Lysate (unitless)\nLTPE397_Lysate (unitless)\nLTPE403_Lysate (unitless)\nAmino_Acid_Metabolism (unitless)\nCarbohydrate_Metabolism (unitless)\nEnergy_Metabolism (unitless)\nLipid_Metabolism (unitless)\nMetabolism_of_Cofactors_and_Vitamins (unitless)\nMetabolism_of_Other_Amino_Acids (unitless)\nNucleotide_Metabolism (unitless)\nSignal_Transduction (unitless)\nOther (unitless)\nUnknown (unitless)\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_986127_v1/index.htmlTable | https://osprey.bco-dmo.org/dataset/986127
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_986127_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_986127_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_986127_v1 |