Accessing BCO-DMO data
Brought to you by BCO-DMO
|
|
BCO-DMO ERDDAP
Accessing BCO-DMO data |
log in
Brought to you by BCO-DMO |
| griddap | Subset | tabledap | Make A Graph | wms | files | Accessible | Title | Summary | FGDC | ISO 19115 | Info | Background Info | RSS | Institution | Dataset ID | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_817298 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_817298.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_817298/ | public | [Hurricane Harvey Coral Gene Expression] - Coral gene expression Sequence Read Archive (SRA) accession numbers and information for samples collected at the Flower Garden Banks National Marine Sanctuary in the Gulf of Mexico in September and October of 2017 to capture effects of Hurricane Harvey (RAPID: Collaborative Research: Impact of freshwater runoff from Hurricane Harvey on coral reef benthic organisms and associated microbial communities) | To capture the immediate effects of storm-driven freshwater runoff on coral and symbiont physiology, we leveraged the heavy rainfall associated with Hurricane Harvey in late August 2017 by sampling FGB coral gene expression at two time points: September 2017, when surface water salinity was reduced (\\u223c34 ppt); and 1 month later when salinity had returned to typical levels (\\u223c36 ppt in October 2017). \\r\\n\\r\\nThis dataset includes Sequence Read Archive (SRA) and BioSample accessions under BioProject PRJNA552981 at The National Center for Biotechnology Information. It also contains sample information and species names for samples collected the east and west banks of the Flower Garden Banks National Marine Sanctuary (FGBNMS) at 80ft.\\r\\n\\r\\nThese data were published in Wright et al. (2019).\n\ncdm_data_type = Other\nVARIABLES:\nSample_Name (unitless)\ntime2 (Time, unitless)\nBank (unitless)\nBuoy (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nSpecies (unitless)\ndepth (m)\nSRA (unitless)\nAccession (unitless)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_817298_fgdc.xml | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_817298_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_817298/index.htmlTable | https://www.bco-dmo.org/dataset/817298
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_817298.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_817298&showErrors=false&email= | BCO-DMO | bcodmo_dataset_817298 | |||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_817436 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_817436.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_817436/ | public | [Sponge-Associated Microbial Communities (via 16S-V4 rRNA amplicon sequencing) Following Storm-Driven Flooding] - SRA accessions and collection information for 16S-V4 rRNA amplicon data from invertebrates sampled at Flower Garden Banks National Marine Sanctuary, Gulf of Mexico following Tax Day Flooding (2016), Hurricane Harvey (2017), and a no flooding year (2018) (RAPID: Collaborative Research: Impact of freshwater runoff from Hurricane Harvey on coral reef benthic organisms and associated microbial communities) | To document the effects of storm-driven freshwater runoff on\\u00a0sponge-\nassociated microbiomes, we leveraged the heavy rainfall\\u00a0associated with\nTax Day Flooding (July 2016) and Hurricane Harvey\\u00a0(August 2017) to\ncharacterize sponge-associated bacterial communities\\u00a0at five time points:\nin July 2016 (at detection of the mortality\\u00a0event), one month after the\nmortality event (August 2016), immediately\\u00a0after Hurricane Harvey\n(September 2017), one month after Hurricane\\u00a0Harvey (October 2017), and\napproximately one year following Hurricane\\u00a0Harvey (October 2018).\n \nThese data contain Sequence Read Archive (SRA) and BioSample accession numbers\nassociated with BioProject\\u00a0PRJNA605902\n(see\\u00a0[https://www.ncbi.nlm.nih.gov/bioproject/605902](\\\\https://www.ncbi.nlm.nih.gov/bioproject/605902\\\\))\\u00a0at\nThe National Center for Biotechnology Information.\n\ncdm_data_type = Other\nVARIABLES:\nSample_Name (unitless)\nCollection_Date_Start (unitless)\nCollection_Date_End (unitless)\nDepth_min (Depth, meters (m))\ndepth (m)\nBank (unitless)\nSpecies (unitless)\nSRA (unitless)\nAccession (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_817436_fgdc.xml | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_817436_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_817436/index.htmlTable | https://www.bco-dmo.org/dataset/817436
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_817436.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_817436&showErrors=false&email= | BCO-DMO | bcodmo_dataset_817436 |