Accessing BCO-DMO data
Brought to you by BCO-DMO
|
|
BCO-DMO ERDDAP
Accessing BCO-DMO data |
log in
Brought to you by BCO-DMO |
| griddap | Subset | tabledap | Make A Graph | wms | files | Accessible | Title | Summary | FGDC | ISO 19115 | Info | Background Info | RSS | Institution | Dataset ID | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| log in | [Epifluorescence Microscopy Cell Size and Biomass] - Epifluorescence Microscopy Water Column Samples from R/V Tangaroa TAN1810 in the Chatham Rise (Subtropical and Sub-Antarctic waters off of New Zealand) from October to November 2018 (Salp Food Web Ecology project) (Collaborative Research: Quantifying trophic roles and food web ecology of salp blooms of the Chatham Rise) | The structure of the phytoplankton community is crucially important to pelagic food webs, biogeochemical processes. and carbon (C) cycle. This study quantifies C-based size spectra, phytoplankton community composition across subtropical and subantarctic waters east of New Zealand. Depth-resolved water column samples were analyzed using epifluorescence microscopy at 15 different sampling locations. Samples were analyzed for biomass and abundance of microplankton (>20 µm), nanoplankton (2-20 µm) and picoplankton (<2 µm) and diatoms. Our results suggest that the subtropical waters are dominated by nanoplankton (35.2 ± 4.6 µg C/L). Offshore subantarctic waters were dominated by picoplankton (24.7 ± 2.1 µg C/L) while microplankton dominated in coastal subantarctic waters (21.7 ± 2.2 µg C/L). Overall, our study helps provide important insights into the structure of phytoplankton communities, their biomass distribution and their contribution to carbon sequestration in the subtropical and subantarctic waters east of New Zealand, highlighting the dominance of nanoplankton in subtropical waters and picoplankton in offshore subantarctic waters.\n\ncdm_data_type = Other\nVARIABLES:\nID (unitless)\nCycle (unitless)\nCast (unitless)\nImage_Number (unitless)\nParticle_Number (unitless)\nFilter_Pore_Size (microns (µm))\nVolume_Filtered (mL)\ndepth (m)\nlongitude (Long, degrees_east)\nlatitude (degrees_north)\nDate (unitless)\nArea (microns squared (µm^2))\nWidth (microns (µm))\nFeret_Length (microns (µm))\nConversion_Ratio (unitless)\n... (6 more variables)\n | BCO-DMO | bcodmo_dataset_905060_v1 | ||||||||||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_526852 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_526852.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_526852/ | public | [JeDI] - Jellyfish Database Initiative: Global records on gelatinous zooplankton for the past 200 years, collected from global sources and literature (Trophic BATS project) (Plankton Community Composition and Trophic Interactions as Modifiers of Carbon Export in the Sargasso Sea \t) | The Jellyfish Database Initiative (JeDI) is a scientifically-coordinated global database dedicated to gelatinous zooplankton (members of the Cnidaria, Ctenophora and Thaliacea) and associated environmental data. The database holds 476,000 quantitative, categorical, presence-absence and presence only records of gelatinous zooplankton spanning the past four centuries (1790-2011) assembled from a variety of published and unpublished sources. Gelatinous zooplankton data are reported to species level, where identified, but taxonomic information on phylum, family and order are reported for all records. Other auxiliary metadata, such as physical, environmental and biometric information relating to the gelatinous zooplankton metadata, are included with each respective entry. JeDI has been developed and designed as an open access research tool for the scientific community to quantitatively define the global baseline of gelatinous zooplankton populations and to describe long-term and large-scale trends in gelatinous zooplankton populations and blooms. It has also been constructed as a future repository of datasets, thus allowing retrospective analyses of the baseline and trends in global gelatinous zooplankton populations to be conducted in the future.\n\ncdm_data_type = Other\nVARIABLES:\nproject_title (dimensionless)\nsub_project_title (dimensionless)\nowner_dataset (dimensionless)\ncontact (dimensionless)\nlocation_name (dimensionless)\ndate (variable)\nyear (unitless)\nmonth (MM)\nday (DD)\ntime_local (HH:MM:SS)\nlatitude (degrees_north)\nlongitude (degrees_east)\ntaxon (dimensionless)\nrank_phylum (dimensionless)\n... (23 more variables)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_526852_fgdc.xml | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_526852_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_526852/index.htmlTable | https://www.bco-dmo.org/dataset/526852
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_526852.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_526852&showErrors=false&email= | BCO-DMO | bcodmo_dataset_526852 | |||
| log in | [P_pools_EFB_cultures_WH8102] - Cell abundance, nutrient concentrations, and intracellular phosphorus pools in Synechococcus sp. WH8102 continuous (EFB) culture experiments (Collaborative Research: Assessing the role of polyphosphate production and cycling in marine ecosystem functioning) | This dataset contains measurements of fluorescence, cell abundance, phosphate concentrations, and intracellular phosphorus (P) pools from continuous culture experiments of Synechococcus sp. WH8102 conducted under controlled laboratory P treatments (High-P, Mid-P, and Low-P). Experiments were performed under steady-state conditions in exponentially fed batch (EFB) cultures (Fischer et al., 2014), with three biological replicates per treatment for four to five consecutive days. Intracellular P partitioning across major macromolecular pools, including ATP, DNA, RNA, free phosphate (Pi), phospholipids, and polyphosphate (polyP). Intracellular P pools were quantified using established biochemical and analytical methods appropriate for each fraction, enabling assessment of cellular P allocation under contrasting nutrient regimes. These data were generated to investigate how P availability constrains microbial physiology, cellular resource allocation, and population dynamics in marine cyanobacteria. The dataset provides a comprehensive view of physiological responses across organizational scales, linking P conditions and growth rates to intracellular P allocation and cell physiology in Synechococcus. Together, these measurements provide a resource for examining P-driven changes in cellular composition and nutrient use strategies in marine microbial systems.\n\ncdm_data_type = Other\nVARIABLES:\ntreatment (categorical (none))\nday (days)\nbottle (categorical (none))\nFLUO (RFU (relative fluorescence units))\ncell (cells per mL (cells / mL))\nSRP (µM (micromoles per liter))\nbiovolume (µm3 per cell)\ngrowth_rates_1_day (per day)\nATP_value_uM (µM (micromoles per liter))\nATP_value_fmol_um3 (fmol µm⁻³)\nATP_value_fmol_cell (fmol cell⁻¹)\nDNA_value_uM (µM (micromoles per liter))\nDNA_value_fmol_um3 (fmol P µm⁻³)\n... (16 more variables)\n | BCO-DMO | bcodmo_dataset_1005084_v1 | ||||||||||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_4019 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_4019.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_4019/ | public | [protist abundance and biomass] - Abundance and biomass of protists from epifluorescence counts and bulk biomass from extracted chl-a from samples from R/V Atlantic Explorer cruises AE1102, AE1118, AE1206, AE1219 in the Sargasso Sea, Bermuda Atlantic Time-Series Station in 2011-12 (Plankton Community Composition and Trophic Interactions as Modifiers of Carbon Export in the Sargasso Sea \t) | Abundance and biomass of protists from epifluorescence counts and bulk biomass from extracted chl-a from samples from R/V Atlantic Explorer cruises AE1102, AE1118, AE1206, AE1219 in the Sargasso Sea, Bermuda Atlantic Time-Series Station in 2011-12.\n\ncdm_data_type = Other\nVARIABLES:\ncruise_id (dimensionless)\ncast (dimensionless)\nstation (dimensionless)\nlocation_description (dimensionless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndepth (m)\ntaxon (dimensionless)\ntotal_biomass_per_taxon (picograms C per milliliter)\nexperiment_num (dimensionless)\ndate (unitless)\nseason_year (text)\nlength (micrometers)\nwidth (micrometers)\nshape (dimensionless)\nabundance (cells per milliliter)\nabund_lower_95pcnt_CI (cells per milliliter)\nabund_upper_95pcnt_CI (cells per milliliter)\ncells_counted (dimensionless)\nbiovolume (cubic micrometers per milliliter)\ndino_biomass (picograms C per cell)\ndiatoms_biomass (picograms C per cell)\nprotists_biomass (picograms C per cell)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_4019_fgdc.xml | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_4019_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_4019/index.htmlTable | https://www.bco-dmo.org/dataset/4019
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_4019.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_4019&showErrors=false&email= | BCO-DMO | bcodmo_dataset_4019 | |||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_930162_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_930162_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_930162_v1/ | public | [SR2114 MOCNESS Net Data] - MOCNESS net data from R/V Sally Ride cruise SR2114 in the Eastern Tropical Pacific from December 2021 to January 2022 (Collaborative Research: Multiyear autonomous measurement of N-loss in the ETNP ODZ) | This dataset includes the environmental data (salinity, temperature, oxygen, density, depth) from the eight MOCNESS tows on the SR2114 expedition onboard the R/V Sally Ride in December 2021 to January 2022. It also includes the larval abundance of the most abundant species and the zooplankton biovolume, as well as the larval abundance by development stage. These results are published in Gutierrez Bravo, et al. (2024).\n\ncdm_data_type = Other\nVARIABLES:\nStation (unitless)\nEvent (unitless)\nMOC_Num (unitless)\nDate (unitless)\nNBf (unitless)\nStratum (unitless)\nDistance (kilometers (km))\nDensity00 (grams per kilogram (g/kg))\ndepth (m)\nlatitude (degrees_north)\nlongitude (degrees_east)\nSbox0Mm_Kg (micromoles per kilogram (umol/kg))\nSal00 (PSU)\nT090C (degrees Celsius)\nGsw_saA0 (degrees Celsius)\nGsw_ctA0 (PSU)\nBiovolume (milliliters per 1000 cubic meters)\nLarval_Abundance (larvae per 1000 cubic meters)\nAuxis_sp (larvae per 1000 cubic meters)\nBenthosema_panamense (larvae per 1000 cubic meters)\nBregmaceros_bathymaster (larvae per 1000 cubic meters)\nCyclothone_sp (larvae per 1000 cubic meters)\nDiaphus_pacificus (larvae per 1000 cubic meters)\n... (11 more variables)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_930162_v1_fgdc.xml | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_930162_v1_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_930162_v1/index.htmlTable | https://www.bco-dmo.org/dataset/930162
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_930162_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_930162_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_930162_v1 |