Accessing BCO-DMO data
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BCO-DMO ERDDAP
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| griddap | Subset | tabledap | Make A Graph | wms | files | Accessible | Title | Summary | FGDC | ISO 19115 | Info | Background Info | RSS | Institution | Dataset ID | |
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| log in | [EPR pump time series] - Larvae and suspended benthic fauna collected with a plankton pump near deep-sea hydrothermal vents at the East Pacific Rise from 1998 to 2025 (Effects of Disturbance and Larval Supply on Communities at Hydrothermal Vents) | This dataset provides the counts for larvae and some later life stage benthic fauna, identified to varying levels of taxonomic granularity, collected with a large-volume plankton pump near deep-sea hydrothermal vents on the East Pacific Rise on 13 cruises from 1998 to 2025. Sampling for this 27-year time series of larval abundance was conducted using a plankton pump (McLane WTS-LV50) filtering up to ~40 cubic meters over 63-micron mesh. Specimens were preserved in ethanol and identified morphologically under a dissecting microscope. Samples were sorted completely, thus concentrations per taxon may be derived from the counts and volume filtered. The primary data file is a single compiled table with the leftmost columns as a Darwin Core Occurrence extension table and rightmost columns from a Darwin Core Event core table; these are provided separately as two additional files formatted for the Ocean Biodiversity Information System.\n\ncdm_data_type = Other\nVARIABLES:\noccurrenceID (unitless)\nverbatimIdentification (unitless)\nindividualCount (integer count)\nscientificName (unitless)\nscientificNameID (unitless)\ntaxonRank (unitless)\nclass (unitless)\nphylum (unitless)\nkingdom (unitless)\nidentifiedBy (unitless)\noccurrenceStatus (unitless)\nbasisOfRecord (unitless)\neventID (unitless)\nsampleSizeValue (liter)\nsampleSizeUnit (unitless)\neventDate (seconds since 1970-01-01T00:00:00Z)\nverbatimEventDate (unitless)\nlocality (unitless)\n... (8 more variables)\n | BCO-DMO | bcodmo_dataset_986309_v1 | ||||||||||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_946438_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_946438_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_946438_v1/ | public | [Gastropod counts by species collected from inactive sulfides on the East Pacific Rise] - Gastropod counts by species collected from inactive sulfides on the East Pacific Rise during R/V Robert Revelle cruise RR2102 in April 2021 and R/V Atlantis cruise AT50-06 in December 2022 (RUI: Collaborative: The Predictive Nature of Microbial Biofilms for Cuing Larval Settlement at Deep-Sea Hydrothermal Vents) | This dataset provides counts by species for gastropods collected mainly from rock grabs at two inactive sulfide mounds (Lucky's Mound and Sentry Spire) near 9°47'N on the East Pacific Rise. Sampling was conducted on dives with HOV Alvin during R/V Atlantis cruise AT50-06 in December 2022 and with ROV Jason during R/V Robert Revelle cruise RR2102 in April 2021. Specimens were preserved in ethanol or fixed in formalin. Gastropods were identified morphologically to species (with genetic sequences obtained for a subset); two of the species were new to science as described by Chen et al. (2024). Counts are not comprehensive thus cannot be used for quantitative analyses. This dataset is provided in a single compiled table formatted as a Darwin Core Occurrence table for provision to the Ocean Biodiversity Information System.\n\ncdm_data_type = Other\nVARIABLES:\noccurrenceID (unitless)\nkingdom (unitless)\nverbatimIdentification (unitless)\nscientificName (unitless)\nscientificNameID (unitless)\ntaxonRank (unitless)\nidentifiedBy (unitless)\nidentificationRemarks (unitless)\nindividualCount (integer count)\nassociatedSequences (unitless)\notherCatalogNumbers (unitless)\noccurrenceStatus (unitless)\nbasisOfRecord (unitless)\nverbatimLabel (unitless)\noccurrenceRemarks (unitless)\neventID (unitless)\ntime (Eventdate, seconds since 1970-01-01T00:00:00Z)\nlocality (unitless)\nlatitude (Decimallatitude, degrees_north)\n... (7 more variables)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_946438_v1_fgdc.xml | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_946438_v1_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_946438_v1/index.htmlTable | https://www.bco-dmo.org/dataset/946438
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_946438_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_946438_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_946438_v1 | |||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_932975_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_932975_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_932975_v1/ | public | [Megafauna counts by taxon in image surveys at inactive sulfides on the East Pacific Rise] - Megafauna counts by taxon in images collected during three surveys (December 25, 2019, April 7 and 9, 2021) with deep-submergence vehicles at inactive sulfide mounds on the East Pacific Rise. (Collaborative Research: Life after Death: Do Inactive Sulfides Fuel a Unique Ecosystem at the Deep Seafloor?) | This dataset includes counts by taxon for megafauna in images collected during surveys with deep-submergence vehicles at inactive sulfide mounds near the 9 50' N hydrothermal vent field on the East Pacific Rise. Images were collected with a down-looking digital still camera. We provide image areas for estimating megafauna density (counts per area of seafloor). Here we provide data from three surveys: one during HOV Alvin Dive 5044 at Lucky's Mound on 25 December 2019 on cruise AT42-21 and two during ROV Jason II Dives 1309 and 1311, on the oceanic rise (between Lucky's Mound and Sentry Spire) on 7 April 2021 and at Sentry Spire on 9 April 2021, respectively, on cruise RR2102. Megafauna were manually annotated to morphotype using ImageJ software. Morphotypes were identified to the lowest taxonomic level and assigned to a feeding mode. This dataset is provided in two formats: long-format comma-separated variable (csv) file and wide-format Excel (xlsx) file. This dataset is analyzed in a manuscript by Meneses et al. (2024).\n\ncdm_data_type = Other\nVARIABLES:\nFile_Name (unitless)\nSite (unitless)\nHabitat (unitless)\nCorrected_Area_m2 (meters squared)\nverbatimIdentification (unitless)\nFeeding_Mode (unitless)\nindividualCount (integer count)\nWoRMS_scientificName (unitless)\nWoRMS_scientificNameID (unitless)\neventDate (unitless)\nlatitude (Decimallatitude, degrees_north)\nlongitude (Decimallongitude, degrees_east)\ndepth (Depth_m, m)\nVehicle_Altitude_m (meters)\nAngleCategory (unitless)\nAdjustment_Value (unitless)\nUseable_Proportion_of_Image (unitless)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_932975_v1_fgdc.xml | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_932975_v1_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_932975_v1/index.htmlTable | https://www.bco-dmo.org/dataset/932975
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_932975_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_932975_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_932975_v1 | |||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_1000298_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_1000298_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_1000298_v1/ | public | [ROV Biological Samples Fkt230602 and Fkt231202] - Biological samples and associated imagery collected by ROV SuBastian during the Octopus Odyssey R/V Falkor (too) expeditions Fkt230602 and Fkt231202 in Costa Rica in Jun and Dec 2023 (Octopus Odyssey) | This dataset includes metadata and imagery of deep-sea biological specimens collected during the Octopus Odyssey expeditions (Fkt230602 and Fkt231202) aboard the R/V Falkor (too) in the Pampa Submarina region off the Pacific coast of Costa Rica. Sampling was conducted from 3-20 June and 3-14 December 2023 using the ROV SuBastian across six geologic features at depths between 500 and 3180 meters. The specimens, which are archived at the Museum of Zoology at the Universidad de Costa Rica, likely contain new species and new records for the area and contribute to understanding local and regional deep-sea biodiversity. \n\nSampling was carried out under national research permits and guided by a collaborative biology team from the Universidad de Costa Rica, Universidad Nacional de Costa Rica, the Field Museum of Chicago, SpeSeas, and the Bigelow Laboratory for Ocean Sciences. The dataset follows the Darwin Core standard for documenting and reporting the occurrence data associated with each sampling event. \n\nA .zip file is provided in the supplemental documents and contains a set of subfolders, one for each sample, with in situ and laboratory images when available. The primary data file includes a relative path in the “associatedMedia” field, enabling each metadata record to be accurately linked to its corresponding imagery.\n\ncdm_data_type = Other\nVARIABLES:\neventID (unitless)\noccurrenceID (unitless)\nassociatedOccurrences (unitless)\nrecordNumber (unitless)\ninstitutionCode (unitless)\ninstitutionID (unitless)\ncollectionCode (unitless)\ncatalogNumber (unitless)\nassociatedMedia (unitless)\nbasisOfRecord (unitless)\n... (36 more variables)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_1000298_v1_fgdc.xml | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_1000298_v1_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_1000298_v1/index.htmlTable | https://osprey.bco-dmo.org/dataset/1000298
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_1000298_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_1000298_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_1000298_v1 | |||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_1001800_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_1001800_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_1001800_v1/ | public | [ROV rock and sediment samples] - Rock and sediment samples collected by ROV SuBastian during the Octopus Odyssey expeditions Fkt230602 and Fkt231202 aboard R/V Falkor (too) in Costa Rica (2023) (Octopus Odyssey) | This dataset includes metadata of geological samples collected during the Octopus Odyssey expeditions (Fkt230602 and Fkt231202) aboard the R/V Falkor (too) in the Pampa Submarina region off the Pacific coast of Costa Rica. Sampling was conducted from 3-20 June and 3-14 December 2023 using the ROV SuBastian across six geologic features at depths between 500 and 3180 meters. Push core sediment samples were collected and used for various analyses. Most rock samples are curated at the Escuela Centroamericana de Geología at the Universidad de Costa Rica (Central American School of Geology, University of Costa Rica) and at the U.S. Geological Survey Pacific Coastal and Marine Science Center, United States of America. Sampling was carried out under national research permits. The data file includes geological descriptions of sediment and rock samples.\n\ncdm_data_type = Other\nVARIABLES:\ncruiseNumber (unitless)\nsampleNumber (unitless)\nsampleType (unitless)\nsampleCode (unitless)\ndescription (unitless)\ngeologicalDescription (unitless)\ntypeofgeologicalDescription (unitless)\ndive (unitless)\ndiveSite (unitless)\ntime (Iso_datetime_utc, seconds since 1970-01-01T00:00:00Z)\neventDate (unitless)\neventDate2 (unitless)\nlatitude (Decimallatitude, degrees_north)\nlongitude (Decimallongitude, degrees_east)\ndepth (Depth_m, m)\nsampleFinalLocation (unitless)\noccurrenceRemarks (unitless)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_1001800_v1_fgdc.xml | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_1001800_v1_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_1001800_v1/index.htmlTable | https://osprey.bco-dmo.org/dataset/1001800
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_1001800_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_1001800_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_1001800_v1 |