Accessing BCO-DMO data
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BCO-DMO ERDDAP
Accessing BCO-DMO data |
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| griddap | Subset | tabledap | Make A Graph | wms | files | Accessible | Title | Summary | FGDC | ISO 19115 | Info | Background Info | RSS | Institution | Dataset ID | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_949666_v1 | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_949666_v1/ | public | [Metadata for longread sequencing of Carcinus maenas] - Metadata for longread sequencing of Carcinus maenas collected from Buzzard's Bay, Massachusetts from May 2022 to Aug 2022 (Collaborative Research: Tracking fine-scale selection to temperature at the invasion front of a highly dispersive marine predator) | This project explores genomic changes in the invasive European green crab (Carcinus maenas), including at a putative inversion polymorphism. To begin to explore structural variation without a reference genome, we conducted semi-targeted longread sequencing of the C. maenas genome using MinION sequencing. This dataset includes individual metadata for 6 raw MinION reads, archived at GenBank's SRA under BioProject PRJNA1171011. This sequencing was conducted using crabs from Massachusetts waters.\n\ncdm_data_type = Other\nVARIABLES:\nsample_name (unitless)\nCollection_date (unitless)\nSRA_accession (unitless)\nbiosample_accession (unitless)\nembayment (unitless)\nstate (unitless)\nsex (unitless)\nlife_stage (unitless)\nrun_ID (unitless)\nsequencing_date (unitless)\nrun_day (days)\nprobe_set (unitless)\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_949666_v1/index.htmlTable | https://www.bco-dmo.org/dataset/949666
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_949666_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_949666_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_949666_v1 |