Accessing BCO-DMO data
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BCO-DMO ERDDAP
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| griddap | Subset | tabledap | Make A Graph | wms | files | Accessible | Title | Summary | FGDC | ISO 19115 | Info | Background Info | RSS | Institution | Dataset ID | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_922718_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_922718_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_922718_v1/ | public | [Abyssal megafauna capture records] - Capture records of abyssal megafauna captured using submersibles and ROVs at Station ALOHA off Hawaii and Station M off California from 2019 to 2020 (Collaborative Research: Assessing the relative importance of small vs large particles as sources of nutrition to abyssal communities) | This dataset includes the capture records for the abyssal megafauna captured as part of this food web project. Megafauna were captured using submersibles and ROVs at Station ALOHA off Hawaii and Station M off California from 2019 to 2020. These animals were captured as representatives of their abyssal food webs for an isotopic investigation of their original particulate nutritional sources (different sized particles). Each organism was identified, measured, most weighed using a motion compensated scale, and frozen for later drying and isotope analysis. For larger organisms such as holothurians or fishes, samples of tissues were taken and often the whole animal was preserved for later confirmation of taxonomic identification.\n\ncdm_data_type = Other\nVARIABLES:\nCruise_number (unitless)\nsample_code (unitless)\nSample (unitless)\nStation (unitless)\nStation_Latitude (degrees_north)\nlongitude (Station_longitude, degrees_east)\nlocal_date (unitless)\nType_of_organism (unitless)\nspecies (unitless)\nnumber (unitless)\nTotal_Length_cm (centimeters (cm))\nStandard_Length_cm (centimeters (cm))\nPreAnal_Fin_Length_cm (centimeters (cm))\nCarapace_Length_mm (millimeters (mm))\nMass_g (grams (g))\nsex (unitless)\nTissue_fin_clip (unitless)\nTissue_whole_body (unitless)\nTissue_white_muscle (unitless)\nTissue_gut_removed (unitless)\n... (9 more variables)\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_922718_v1/index.htmlTable | https://www.bco-dmo.org/dataset/922718
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_922718_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_922718_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_922718_v1 | |||||
| log in | [Dilution experiment treatments and Chl data] - Shipboard Plankton Dilution Experiment Chlorophyll collected at the mid-Atlantic Bight Shelfbreak on R/V Neil Armstrong AR29, R/V Ronald H. Brown RB1904 and R/V Thomas G. Thompson TN368 to the New England Shelfbreak in April 2018 and and May/July 2019 (Collaborative Research: Shelfbreak Frontal Dynamics: Mechanisms of Upwelling, Net Community Production, and Ecological Implications) | As part of the Shelfbreak Productivity Interdisciplinary Research Operation at the Pioneer Array (SPIROPA) Project, twelve grazing experiments utilizing the two-point dilution technique were conducted during each of three research cruises (April of 2018, and May and July of 2019) in the Middle Atlantic Bight to estimate microzooplankton grazing rates and net phytoplankton growth rates. Stations where the dilution experiments were conducted were strategically located in one of three key cross-shelf water mass regimes: (1) at the shelfbreak front, (2) inshore of the front in continental shelf water and (3) offshore of the front in slope water. Grazing incubations were performed on water sampled from the chlorophyll maximum, when present, and conducted on the <200 µm fraction of water (what passed through a 200 µm sieve) in order to include only the microzooplankton grazers and avoid trophic cascades associated with mesozooplankton predators and grazers. The 2 dilution points were 10% and 100% of the < 200 µm sample water. All experiments were run in triplicate for 24 hours and consisted of a dark treatment incubation and a light treatment incubation at a simulated 30% E0.\n\ncdm_data_type = Other\nVARIABLES:\nCRUISE (unitless)\nEXPERIMENT (unitless)\nSTATION (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nSAMPLE_ID (unitless)\nWATER_MASS (unitless)\ndepth (Depth_m, m)\nDATE (unitless)\nCHLA (µg/L)\nPHEO (µg/L)\nPERC_Chla (%)\nMEAN_Chla (µg/L)\nSD (µg/L)\nSE (µg/L)\nNOTES (units)\nSample_Code (unitless)\n | BCO-DMO | bcodmo_dataset_961794_v1 | ||||||||||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_964619_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_964619_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_964619_v1/ | public | [Microbial Fluid Cell Counts] - Microbial fluid cell count data collected on Falkor (too), cruise Fkt231202 with ROV fluid sampler in the Central Eastern Pacific offshore Costa Rica in Dec 2023 (Octopus Odyssey) | These data are microscopic cell counts of microbes in venting fluids and background seawater samples collected during Octopus Odyssey (too) expedition on Falkor (too), cruise Fkt231202, in the Central Eastern Pacific from December 4th to December 12th, 2023. Instrument used to collect the sampler was a SUPR (Suspended Underwater Particulate Rosette) sampler modified for ROV SuBastian. Cells were visualized using SYBR staining. Samples were collected by Julie Huber.\n\ncdm_data_type = Other\nVARIABLES:\nCruise_Number (unitless)\nSample_Number (unitless)\nSample_Type (unitless)\nROV_Storage (unitless)\nSample_code (unitless)\nDescription (unitless)\nDive (unitless)\nDive_Site (unitless)\nTime_UTC (unitless)\nDate (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndepth (m)\nCells_per_mL (cells/mL)\nstandard_deviation (unitless)\ntime (Iso_datetime_utc, seconds since 1970-01-01T00:00:00Z)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_964619_v1_fgdc.xml | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_964619_v1_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_964619_v1/index.htmlTable | https://osprey.bco-dmo.org/dataset/964619
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_964619_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_964619_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_964619_v1 | |||
| log in | [Wild copepod pool-seq data] - Pool-seq data from wild populations of copepods in the North Sea from May 2014 (Evolutionary genomics of a copepod project) (Evolutionary Responses to Global Changes in Salinity and Temperature) | This dataset was generated from studies of wild populations of Eurytemora affinis (E. affinis). Copepod populations were collected from three locations in the North Sea using bongo nets with 100 micrometer (μm) mesh and stored in RNAlater. Sampling locations included two freshwater lakes and one brackish estuary. Individual copepods (100 individuals, 50:50 male:female) were pooled and their DNA was extracted. Paired-end whole-genome sequencing libraries were prepared using the Illumina Nextera DNA kit (Illumina, Inc.) and sequenced on three lanes of an Illumina HiSeq 2000 sequencer, generating an average of approximately 158 million paired-end (100 bp) reads per pool. These data have been deposited in the National Center for Biotechnology Information (NCBI) under BioProject number PRJNA923656.\n\ncdm_data_type = Other\nVARIABLES:\nLocation (unitless)\nCollection_Date (unitless)\nSample_Code (unitless)\nSample_Salinity (Practical salinity units (PSU))\nSample_Temperature (degrees Celsius)\nLatitude (degrees_north)\nLongitude (degrees_east)\nBioSample (unitless)\nSRA_Run (unitless)\n | BCO-DMO | bcodmo_dataset_897977_v1 | ||||||||||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_682074 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_682074.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_682074/ | public | [Zooplankton Densities] - Zooplankton densities collected from a seasonally hypoxic fjord on R/V Clifford A Barnes cruises from 2012-2013 (Pelagic Hypoxia project) (Consequences of hypoxia on food web linkages in a pelagic marine ecosystem) | Zooplankton densities collected from a seasonally hypoxic fjord on R/V Clifford A Barnes cruises from 2012-2013 (Pelagic Hypoxia project)\n\ncdm_data_type = Other\nVARIABLES:\nstation (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nday_night (unitless)\nspecies (unitless)\ndate (unitless)\ntime_start (unitless)\nlife_history_stage (unitless)\nsample_code (unitless)\nmesh_size (microns)\ndepth_max (Depth, meters)\ndepth_min (Depth, meters)\nFWC_DS (unitless)\ndensity (count per meter cubed)\ntime (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_682074_fgdc.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_682074/index.htmlTable | https://www.bco-dmo.org/dataset/682074
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_682074.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_682074&showErrors=false&email= | BCO-DMO | bcodmo_dataset_682074 |