Accessing BCO-DMO data
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BCO-DMO ERDDAP
Accessing BCO-DMO data |
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| griddap | Subset | tabledap | Make A Graph | wms | files | Accessible | Title | Summary | FGDC | ISO 19115 | Info | Background Info | RSS | Institution | Dataset ID | |
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| log in | [Wild copepod pool-seq data] - Pool-seq data from wild populations of copepods in the North Sea from May 2014 (Evolutionary genomics of a copepod project) (Evolutionary Responses to Global Changes in Salinity and Temperature) | This dataset was generated from studies of wild populations of Eurytemora affinis (E. affinis). Copepod populations were collected from three locations in the North Sea using bongo nets with 100 micrometer (μm) mesh and stored in RNAlater. Sampling locations included two freshwater lakes and one brackish estuary. Individual copepods (100 individuals, 50:50 male:female) were pooled and their DNA was extracted. Paired-end whole-genome sequencing libraries were prepared using the Illumina Nextera DNA kit (Illumina, Inc.) and sequenced on three lanes of an Illumina HiSeq 2000 sequencer, generating an average of approximately 158 million paired-end (100 bp) reads per pool. These data have been deposited in the National Center for Biotechnology Information (NCBI) under BioProject number PRJNA923656.\n\ncdm_data_type = Other\nVARIABLES:\nLocation (unitless)\nCollection_Date (unitless)\nSample_Code (unitless)\nSample_Salinity (Practical salinity units (PSU))\nSample_Temperature (degrees Celsius)\nLatitude (degrees_north)\nLongitude (degrees_east)\nBioSample (unitless)\nSRA_Run (unitless)\n | BCO-DMO | bcodmo_dataset_897977_v1 |