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log in [Adult black sea bass winter survival and lipid dynamics: Wild fish] - Adult Black Sea Bass (Centropristis striata) winter survival and lipid accumulation in wild-caught fish in Long Island Sound in Sept of 2022 to Apr of 2023 (Collaborative research: The genomic underpinnings of local adaptation despite gene flow along a coastal environmental cline) This dataset contains adult Black Sea Bass (Centropristis striata) winter survival and lipid accumulation in wild-caught fish in Long Island Sound (September 2022 to April 2023). This dataset includes data from fish collected concurrently with those used in a related mesocosm experiment (run Oct 2022 to Apr 2023), with fish collected at the same reef (see 'Related Datasets' section).\n\nStudy description:\n\nWe experimentally examined overwintering potential of adult Black Sea Bass (Centropristis striata), an ecologically and economically important fish that seasonally migrates from offshore overwintering grounds to coastal feeding and nursery areas. We collected adults from Long Island Sound in September 2022 and reared them in a laboratory-mesocosm experiment under a contemporary seasonal temperature profile for Long Island Sound (LIS; October 2022 – April 2023) to assess their potential to survive and accumulate lipids throughout the winter. We also fed experimental adults two diet items (blue mussels and Atlantic herring), which are commonly found in Long Island Sound. \n\nIn addition, we sampled fish from the same reef in LIS at the start (October) and end (April) of the experiment to identify lipid dynamics in wild fish that migrate offshore. Experimental C. striata growth throughout the winter was negligible with high mortality (> 50% observed). \n\nWhile survivors fed herring had higher tissue lipid contents, mortality was 2x higher than for fish fed mussels. In contrast, to the experimental fish, wild-captured fish in the spring had higher gonadosmatic indices than that for survivors across both diet treatments, which was most similar to fall-captured fish. While some fish survived throughout the winter, current winter bottom temperatures still preclude a year-round C. striata presence within Long Island Sound. Overwintering inshore is still disadvantageous compared to seasonally migrating due to surviving experimental fish having lower gonadosomatic indices, suggesting that the offshore overwintering period is a time to build energy reserves. However, as coastal waters continue to warm, changing conditions could lead populations to become year-round residents of Long Island Sound, thus increasing C. striata abundance.\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\n... (34 more variables)\n BCO-DMO bcodmo_dataset_938012_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_738160 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_738160.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_738160/ public [Concentrations of phospholipid-linked fatty acids (PLFAs)] - Concentrations of phospholipid-linked fatty acids (PLFAs) in the surface sediments of three marsh ponds in PIE-LTER (Rowley, MA) from 2014. (Eutrophication Effects on Sediment Metabolism and Benthic Algal-bacterial Coupling: An Application of Novel Techniques in a LTER Estuary) Concentrations of phospholipid-linked fatty acids (PLFAs) in the surface sediments of three marsh ponds in PIE-LTER (Rowley, MA). Data were collected over 11 weeks in the summer and fall of 2014.\n\ncdm_data_type = Other\nVARIABLES:\nPond (unitless)\nWeek (unitless)\nSeason (unitless)\nTide (unitless)\nSampling_Date (unitless)\nC12_0 (per mil)\niso_C13 (per mil)\nanteiso_C13 (per mil)\nC13_0 (per mil)\niso_C14 (per mil)\nC14_0 (per mil)\niso_C15 (per mil)\nanteiso_C15 (per mil)\nC15_0 (per mil)\niso_C16 (per mil)\niso_16_1w9c (per mil)\niso_16_1w9t (per mil)\niso_16_1w7 (per mil)\nC16_0 (per mil)\nmethyl_10_C16 (per mil)\niso_C17 (per mil)\nanteiso_C17 (per mil)\nC17_1 (per mil)\nC17_0 (per mil)\nC18_4 (per mil)\nC18_2 (per mil)\n... (21 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_738160/index.htmlTable https://www.bco-dmo.org/dataset/738160 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_738160.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_738160&showErrors=false&email= BCO-DMO bcodmo_dataset_738160
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_782518 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_782518.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_782518/ public [Gulf of Mexico NO3 isotopes] - Water column nitrate+nitrite d15N and d18O from samples collected during R/V Pelican and R/V F.G. Walton Smith cruises in the Gulf of Mexico and Florida Straits between 2011 and 2018 (Quantifying nitrogen fixation along unique geochemical gradients in the southwest Pacific Ocean) This data set includes water column nitrate+nitrite d15N and d18O measurements from the Gulf of Mexico and Florida Straits. These measurements were used to address whether Mississippi River nitrate is entrained in Loop Current waters and potentially exported from the Gulf of Mexico to the North Atlantic.  Water samples were collected during R/V Pelican and R/V F.G. Walton Smith cruises in the Gulf of Mexico and Florida Straits between 2011 and 2018.\n\ncdm_data_type = Other\nVARIABLES:\nCruise_ID (unitless)\nSampling_Date (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndepth (m)\nSigmaTheta (Sea Water Sigma Theta, unitless)\nNO3_NO2 (Mole Concentration Of Nitrate In Sea Water, micro molar (µM))\nNO3_NO2_d15N (Mole Concentration Of Nitrate In Sea Water, per mil (0/00) vs. N2 in air)\nNO3_NO2_d18O (Mole Concentration Of Nitrate In Sea Water, per mil (0/00) vs. VSMOW)\nsal (Practical Salinity Units (PSU))\ntemp (Temperature, degrees Celsius)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_782518_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_782518/index.htmlTable https://www.bco-dmo.org/dataset/782518 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_782518.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_782518&showErrors=false&email= BCO-DMO bcodmo_dataset_782518
log in [June 2019 Slover cruise data] - Adenosine triphosphate and microbial biomass measurements from the Chesapeake Bay, sampled aboard RV Fay Slover on June 18, 2019 (Adenosine triphosphate as a master variable for biomass in the oceanographic context) This dataset contains values from instruments and Niskin bottle samples from a research expedition on the RV Slover on June 18, 2019. Four stations were sampled with five bottle samples each from the coastal ocean to tributaries of the Chesapeake Bay. The variables are latitude, longitude, station number, depth, sigma-t, beam attenuation, relative chlorophyll fluorescence, particulate ATP, total ATP, particulate organic nitrogen, and particulate organic carbon.\n\ncdm_data_type = Other\nVARIABLES:\nsampling_date (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nstation (unitless)\nstation_number_for_publication (unitless)\ndepth (m)\nsigmat (unitless)\nbeamtrans (percentage (%))\nchla (relative fluorescence units)\nATPp (nanomolar (nM))\nATPtot (unitless)\nav_N_ug_L (microgram/liter)\nav_C_ug_L (microgram/liter)\nbeamc_1 (meter-1)\nbeam_BL (meter-1)\nbeamc_2 (meter-1)\n BCO-DMO bcodmo_dataset_939509_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_897484_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_897484_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_897484_v1/ public [Noble gas isotope data from Oregon and Arizona groundwater] - Noble gas isotope data from field campaigns sampling groundwater in Umatilla, Oregon during September 2020 and in Tucson, Arizona during November 2021 (Collaborative Research: Novel constraints on air-sea gas exchange and deep ocean ventilation from high-precision noble gas isotope measurements in seawater) This project developed a novel seawater and groundwater noble gas isotope extraction technique, building on an approach pioneered by Dr. Steve Emerson that involves equilibration of headspace and water followed by vacuum removal and disposal of almost all the water. Corrections are then made for the lost noble gas in the water, using precisely measured mass and volume. The method uses 6-liter stainless steel flasks with Nupro valves for improved leak-tightness. This extraction technique made it possible to measure neon as well as the heavier noble-gas isotopes, all from the same sample, providing a constraint on \"excess air\" using the neon. Field campaigns sampling groundwater were conducted in Oregon and Arizona. Data from these campaigns are deposited here.\n\ncdm_data_type = Other\nVARIABLES:\nState_ID (unitless)\nLocation (unitless)\nSite (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nElevation_m (meters (m))\nElevation_ft (feet (ft))\nPressure_atm (atmosphere (atm))\nMid_screen_depth_ft (feet (ft))\nScreen_length_ft (feet (ft))\nDepth_to_water_ft (feet (ft))\nSampling_date (unitless)\nNG_method (unitless)\nHe (cubic centimeters per gram (cc/g))\nHe_err (cubic centimeters per gram (cc/g))\nNe (cubic centimeters per gram (cc/g))\nNe_err (cubic centimeters per gram (cc/g))\nAr (cubic centimeters per gram (cc/g))\nAr_err (cubic centimeters per gram (cc/g))\nKr (cubic centimeters per gram (cc/g))\n... (23 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_897484_v1_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_897484_v1_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_897484_v1/index.htmlTable https://www.bco-dmo.org/dataset/897484 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_897484_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_897484_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_897484_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_4038.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_4038 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_4038.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_4038/ public [Series 4: Aggregation of Thalassiosira weissflogii as a function of pCO2, temperature and bacteria: Acclimatization Phase - Carbonate System] - Aggregation of Thalassiosira weissflogii as a function of pCO2, temperature, and bacteria - Acclimatization Phase - Carbonate System from UCSB MSI Passow Laboratory from 2009 to 2010 (OA - Ocean Acidification and Aggregation project) (Will Ocean Acidification Diminish Particle Aggregation and Mineral Scavenging, Thus Weakening the Biological Pump? ) Series 4: Aggregation of Thalassiosira weissflogii as a function of pCO2,\ntemperature and bacteria: Acclimatisation Phase - Carbonate System\n \nRelated Reference:  \n[Aggregation and Sedimentation of Thalassiosira weissflogii (diatom) in a\nWarmer and More Acidified Future\nOcean](\\\\http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0112379\\\\)\n\ncdm_data_type = Other\nVARIABLES:\nLab_Id (text)\nlatitude (degrees_north)\nlongitude (degrees_east)\nTemp (Temperature, degrees C)\npCO2 (P CO2, text)\nsampling_date (unitless)\nday_of_acclimatisation (integer)\npH_at_25C (P H At 25 C, total scale)\nDIC (umol/kgSW)\nTA (umol/kgSW)\nSalinity (Sea Water Practical Salinity, ppt)\ngrowth_rate (u per day)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_4038_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_4038/index.htmlTable https://www.bco-dmo.org/dataset/4038 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_4038.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_4038&showErrors=false&email= BCO-DMO bcodmo_dataset_4038
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_528131.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_528131 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_528131.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_528131/ public [Series 4: Aggregation of Thalassiosira weissflogii as a function of pCO2, temperature and bacteria: Acclimatization Phase - Cell Counts] - Aggregation of Thalassiosira weissflogii as a function of pCO2, temperature and bacteria - Acclimatization Phase - Cell Counts from UCSB MSI Passow Lab from 2009 to 2010 (OA - Ocean Acidification and Aggregation project) (Will Ocean Acidification Diminish Particle Aggregation and Mineral Scavenging, Thus Weakening the Biological Pump? ) Series 4: Aggregation of Thalassiosira weissflogii as a function of pCO2,\ntemperature and bacteria: Acclimatisation Phase - Cell Counts\n \nRelated Reference:  \n[Aggregation and Sedimentation of Thalassiosira weissflogii (diatom) in a\nWarmer and More Acidified Future\nOcean](\\\\http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0112379\\\\)\n\ncdm_data_type = Other\nVARIABLES:\nLab_Id (text)\nlatitude (degrees_north)\nlongitude (degrees_east)\nTemp (Temperature, degrees C)\npCO2 (P CO2, text)\nsampling_date (unitless)\nday_of_acclimatisation (integer)\ndiatom_cell_count (number)\ndilution_factor ((tbd))\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_528131_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_528131/index.htmlTable https://www.bco-dmo.org/dataset/528131 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_528131.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_528131&showErrors=false&email= BCO-DMO bcodmo_dataset_528131
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_738494 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_738494.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_738494/ public [Table 2 - Carbonate data and nutrients during egg experiments] - Table 2: Carbonate data and nutrients measured during Calanus finmarchicus and Meganyctiphanes norvegica egg hatching success experiments, 2011-2012 (Ocean Acidification-Category 1- Impact of ocean acidification on survival of early life stages of planktonic copepods in the genus Calanus in the northern) This dataset presents the carbonate system and nutrients measurements during Calanus finmarchicus and Meganyctiphanes norvegica egg hatching success experiments, 2011-2012. Results are published in Preziosi et al (2017), Table 2.\n\ncdm_data_type = Other\nVARIABLES:\nEXPERIMENT (unitless)\nSAMPLING_DATE (unitless)\nEVENT (unitless)\nTIME_elapsed (hours)\nTANK (unitless)\nTEMP (Temperature, degrees Celsius)\nSAL (parts per thousand (ppt))\nALKALIN (micromol/kilogram)\nTCO2 (micromol/kilogram)\nNO3_NO2 (Mole Concentration Of Nitrate In Sea Water, micromol/kilogram)\nNH4 (Mole Concentration Of Ammonium In Sea Water, micromol/kilogram)\nPO4 (Mass Concentration Of Phosphate In Sea Water, micromol/kilogram)\nSI (Mass Concentration Of Silicate In Sea Water, micromol/kilogram)\nPHTTL (pH units)\nXCO2 (parts per million (ppm) in dry gas)\nOMCA (unitless)\nOMAR (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_738494/index.htmlTable https://www.bco-dmo.org/dataset/738494 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_738494.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_738494&showErrors=false&email= BCO-DMO bcodmo_dataset_738494
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_739646 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_739646.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_739646/ public [VAHINE nitrogen] - Dissolved and sinking particulate organic nitrogen data from a large volume mesocosm experiment in the Noumea Lagoon, New Caledonia, measured from January to February 2013 (Quantifying nitrogen fixation along unique geochemical gradients in the southwest Pacific Ocean) This dataset includes water column dissolved organic nitrogen (DON) concentration and d15N data, as well as sinking particulate nitrogen d15N (\\u201cPNsink d15N\\u201d) data. These samples were collected inside triplicate (\\u201cM1\\u201d, \\u201cM2\\u201d, and \\u201cM3\\u201d) large volume (i.e., 2.3 m diameter, 15 m deep) mesocosm experiments deployed in a lagoon off of Noumea, New Caledonia. DON samples were collected at 6 m depth daily by a Teflon pump and PVC tubing. PNsink d15N samples were collected daily by SCUBA divers who removed a screw-top plastic bottle from the bottom of the plastic mesocosm. \\u201cSwimmers\\u201d were removed from the PNsink d15N samples prior to analysis.\\r\\n\\r\\nThese measurements were made as part of project \\VAriability of vertical and tropHIc transfer of diazotroph derived N in the south wEst Pacific\\ (VAHINE) to study the fate of fixed nitrogen in the oceanic pelagic food web and its potential impact on carbon export. The field campaign of VAHINE took place in the South West Pacific (New Caledonia) in January and February of 2013 and involved 16 scientists from France, Israel, Germany and the USA.\n\ncdm_data_type = Other\nVARIABLES:\nSampling_Date (unitless)\nM1_DON (micromolar (uM))\nM1_DONd15N (M1 DONd15 N, per mil (0/00))\nM2_DON (micromolar (uM))\nM2_DONd15N (M2 DONd15 N, per mil (0/00))\nM3_DON (micromolar (uM))\nM3_DONd15N (M3 DONd15 N, per mil (0/00))\nM1_d15NPNsink (M1 D15 NPNsink, per mil (0/00))\nM2_d15NPNsink (M2 D15 NPNsink, per mil (0/00))\nM3_d15NPNsink (M3 D15 NPNsink, per mil (0/00))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_739646/index.htmlTable https://www.bco-dmo.org/dataset/739646 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_739646.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_739646&showErrors=false&email= BCO-DMO bcodmo_dataset_739646

 
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