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https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_780386 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_780386.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_780386/ public [Anderson & Rynearson 2020: Skeletonema CHN] - Elemental carbon and nitrogen data for Skeletonema species as analyzed in Anderson and Rynearson, 2020 (Dimensions: Collaborative Research: Genetic, functional and phylogenetic diversity determines marine phytoplankton community responses to changing temperature and nutrients) Elemental concentrations for Skeletonema species (n=2), as analyzed in Anderson and Rynearson, 2020. This dataset includes carbon, nitrogen, and volume measurements for S. marinoi (n=3) and S. pseudocostatum (n=4) evaluated at the thermal minimum, maximum, and optimum for each strain. Strains were isolated from Narragansett Bay, Rhode Island.\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\nStrain (unitless)\nGenBank (Gen Bank, unitless)\nCollection_date (unitless)\nlatitude (Isolation Lat, degrees_north)\nlongitude (Isolation Lon, degrees_east)\nIsolation_Temperature (degrees C)\nTemperature (degrees C)\nmeanC (Mean C, picomol carbon per cell)\nseC (Se C, picomol carbon per cell)\nmeanN (Mean N, picomol nitrogen per cell)\nseN (Se N, picomol nitrogen per cell)\nmeanCN (Mean CN, unitless)\nseCN (Se CN, unitless)\nmeanV (Mean V, cubic micrometers (um3))\nseV (Se V, cubic micrometers (um3))\nmean_cd (femtomol/cubic micrometers (fmol um-3))\nse_cd (femtomol/cubic micrometers (fmol um-3))\nmean_nd (femtomol/cubic micrometers (fmol um-3))\nse_nd (femtomol/cubic micrometers (fmol um-3))\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_780386_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_780386_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_780386/index.htmlTable https://www.bco-dmo.org/dataset/780386 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_780386.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_780386&showErrors=false&email= BCO-DMO bcodmo_dataset_780386
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774996 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774996.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_774996/ public [Anderson & Rynearson 2020: Skeletonema thermal growth] - Thermal growth for Skeletonema species as analyzed in Anderson and Rynearson, 2020 (Dimensions: Collaborative Research: Genetic, functional and phylogenetic diversity determines marine phytoplankton community responses to changing temperature and nutrients) Thermal growth rates for 24 strains representing 5 species from the diatom genus Skeletonema, as analyzed in Anderson and Rynearson, 2020. Strains were grown at temperatures ranging from -2 to 36C to assess how inter- and intraspecific thermal trait variability could explain diatom community dynamics.\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\nStrain (unitless)\nTemperature (degrees C)\nIsolation_Temperature (degrees C)\nGrowth (per day)\nGenBank (Gen Bank, unitless)\nCollection_date (unitless)\nlatitude (Isolation Lat, degrees_north)\nlongitude (Isolation Lon, degrees_east)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_774996_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_774996_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_774996/index.htmlTable https://www.bco-dmo.org/dataset/774996 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_774996.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_774996&showErrors=false&email= BCO-DMO bcodmo_dataset_774996
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_935908_v1 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_935908_v1/ public [Bacterial communities and relative abundances of the pathogen Vibrio coralliilyticus in feces of coral reef fish] - Bacterial communities and relative abundances of the pathogen Vibrio coralliilyticus in feces of coral reef fish collected on the north shore of Mo’orea, French Polynesia, Oct 2020 (CAREER: Testing the effects of predator-derived feces on host symbiont acquisition and health) Understanding how microbial communities in consumer feces may impact ecosystem health may improve conservation and restoration efforts. To test how microbial communities in fish feces may affect coral reef health, we collected fecal samples from ten fish species, ranging from obligate corallivore to grazer/detritivore. Additionally, samples of corals, algae, sediments, and seawater were collected to test whether bacterial taxa in these samples were also represented in fish feces (N = 5-14 per fish, coral, or algae species/genus). All collections were conducted in October 2020 from the back reef (1-2 m depth) and fore reef (5-10 m depth) in Moorea, between LTER sites 1 and 2 of the Moorea Coral Reef (MCR) Long Term Ecological Research (LTER) site. We conducted bacterial 16S rRNA gene metabarcoding on all samples and found that fecal communities of bacteria differed among fish guilds (obligate corallivores, facultative corallivores, grazer/detritivores). We also used real-time PCR to quantify abundances of Vibrio coralliilyticus, a known coral pathogen,  in all fecal samples. Samples were collected and processed, and data were analyzed, by the authors of Grupstra et al., 2023.\n\ncdm_data_type = Other\nVARIABLES:\nsample_name (unitless)\nSRA (unitless)\nBioSample (unitless)\norganism (unitless)\nstrain (unitless)\nisolation_source (unitless)\ncollection_date (unitless)\ngeo_loc_name (unitless)\ndepth_r (Depth, m)\nenv_broad_scale (unitless)\nhost_description (unitless)\nhost_tissue_sampled (unitless)\nhost_diet (unitless)\nhost_feces_dCT (cycles)\nhost_AphiaID (unitless)\nhost_ScientificName (unitless)\nhost_LSID (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_935908_v1/index.htmlTable https://www.bco-dmo.org/dataset/935908 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_935908_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_935908_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_935908_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_665454 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_665454.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_665454/ public [BLASTp homology data] - BLASTp homology data from genes obtained in samples collected on the Gould (LMG1411) cruise in the Western Antarctica Peninsula during 2014 (Polar Transcriptomes project). (Iron and Light Limitation in Ecologically Important Polar Diatoms: Comparative Transcriptomics and Development of Molecular Indicators) BLASTp homology data from genes obtained in samples collected on the Gould (LMG1411) cruise in the Western Antarctica Peninsula during 2014 (Polar Transcriptomes project).\n\ncdm_data_type = Other\nVARIABLES:\ngene (unitless)\ngenus (unitless)\nspecies (unitless)\nstrain (unitless)\nMMETSP_ID (unitless)\nsubject_ID (unitless)\ne_value (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nclade (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_665454_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_665454_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_665454/index.htmlTable https://www.bco-dmo.org/dataset/665454 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_665454.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_665454&showErrors=false&email= BCO-DMO bcodmo_dataset_665454
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_782814 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_782814.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_782814/ public [Diatom growth rates] - Growth rates across multiple temperatures and light intensities for seven strains of a marine Chaetoceros sp. isolated from Narragansett Bay March 2018. Growth was measured across six to seven temperatures and three light intensities for each strain (Dimensions: Collaborative Research: Genetic, functional and phylogenetic diversity determines marine phytoplankton community responses to changing temperature and nutrients) Growth rates for seven strains of a marine Chaetoceros sp. isolated from Narragansett Bay March 2018. Growth was measured across six to seven temperatures and three light intensities for each strain\n\ncdm_data_type = Other\nVARIABLES:\nStrain (unitless)\nTemperature (degrees Celsius)\nLight (umol Photons per m2 per second)\ngrowth_rate_mean (cells/day)\ngrowth_rate_StDev (Growth Rate St Dev, cells/day)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_782814_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_782814/index.htmlTable https://www.bco-dmo.org/dataset/782814 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_782814.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_782814&showErrors=false&email= BCO-DMO bcodmo_dataset_782814
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_782839 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_782839.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_782839/ public [Diatom TPC parameters] - Thermal niche across three light levels for seven strains of a marine diatom Chaetoceros sp. isolated from Narragansett Bay March 2018 (Dimensions: Collaborative Research: Genetic, functional and phylogenetic diversity determines marine phytoplankton community responses to changing temperature and nutrients) Thermal niche, as calculated from the Thermal Performance Curve (TPC), across three light levels for seven strains of a marine diatom Chaetoceros sp. isolated from Narragansett Bay March 2018.\n\ncdm_data_type = Other\nVARIABLES:\nStrain (unitless)\nLight (umol Photons per m2 per second)\ntopt (degrees Celsius)\ntmin (Minimum Temperature, degrees Celsius)\ntmax (Maximum Temperature, degrees Celsius)\nrsqr (unitless)\nwidth (degrees Celsius)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_782839_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_782839/index.htmlTable https://www.bco-dmo.org/dataset/782839 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_782839.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_782839&showErrors=false&email= BCO-DMO bcodmo_dataset_782839
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_712803 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_712803.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_712803/ public [Halomethane concentrations in cell culture] - Halomethane concentrations in cell culture (The role of organic and metal cofactors on the biogenic synthesis of halogenated volatile hydrocarbons) Halomethane concentrations in cell culture\n\ncdm_data_type = Other\nVARIABLES:\nStrain (unitless)\nSpecies (unitless)\nClade (unitless)\nTime_elapsed_hours (hours)\ncells_per_ml (cells per milliliter)\nCH3Br (CH3 BR, picomoles per liter)\nCH3I (CH3 I, picomoles per liter)\nCH3Cl (CH3 CL, picomoles per liter)\nCHBr3 (picomoles per liter)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_712803_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_712803/index.htmlTable https://www.bco-dmo.org/dataset/712803 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_712803.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_712803&showErrors=false&email= BCO-DMO bcodmo_dataset_712803
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_747872.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_747872 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_747872.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_747872/ public [Heterosigma akashiwo acclimation] - NCBI accessions of the harmful alga Heterosigma akashiwo (CCMP2393) grown under a range of CO2 concentrations from 200-1000 ppm (Impacts of Evolution on the Response of Phytoplankton Populations to Rising CO2) This dataset includes metadata associated with NCBI BioProject PRJNA377729 \\Impacts of Evolution on the Response of Phytoplankton Populations to Rising CO2\\ PRJNA377729: https://www.ncbi.nlm.nih.gov/bioproject/PRJNA377729. The alga Heterosigma akashiwo was grown at CO2 levels from about 200 to 1000 ppm and then the DNA and RNA were sequenced.\n\ncdm_data_type = Other\nVARIABLES:\nsample_name (unitless)\nsample_title (unitless)\nbioproject_accession (unitless)\norganism (unitless)\nstrain (unitless)\nisolate (unitless)\nhost (unitless)\nisolation_source (unitless)\ntime (Collection Date, seconds since 1970-01-01T00:00:00Z)\ngeo_loc_name (unitless)\nsample_type (unitless)\nbiomaterial_provider (unitless)\ncollected_by (unitless)\ndepth (m)\nenv_biome (unitless)\ngenotype (unitless)\nlat_lon (Latitude, decimal degrees)\npassage_history (unitless)\nsamp_size (unitless)\ntemp_C (degrees Celsius)\nlight_level_umol_m2_s (micromol photons m-2 s-1)\nlight_dark_hr (hours)\nMedia (unitless)\nCO2_ppm (parts per million)\nAlkalinity (micromol per kilogram (umol/kg))\npH (Sea Water Ph Reported On Total Scale, unitless; pH scale)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_747872_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_747872/index.htmlTable https://www.bco-dmo.org/dataset/747872 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_747872.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_747872&showErrors=false&email= BCO-DMO bcodmo_dataset_747872
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_658497.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_658497 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_658497.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_658497/ public [Isolation culturing and sequencing of bacteria and viruses] - Isolation, culturing, and sequencing of bacteria and viruses collected in Canoe Cove, Nahant, MA during 2010 (Marine Bacterial Viruses project) (How can bacterial viruses succeed in the marine environment?) Isolation, culturing, and sequencing of bacteria and viruses collected in Canoe Cove, Nahant, MA during 2010 (Marine Bacterial Viruses project)\n\ncdm_data_type = Other\nVARIABLES:\nbioproject_accession (unitless)\nenv_biome (unitless)\ngeo_loc_name (unitless)\norganism_type (unitless)\ncollection_date (unitless)\nisolation_source (unitless)\nsample_name (unitless)\norganism (unitless)\nstrain (unitless)\nisolate (unitless)\nhost (unitless)\nlab_host (unitless)\nsample_type (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ntemp (Temperature, degrees celsius)\nordinal_day_of_isolation (unitless)\ndescription (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_658497_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_658497_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_658497/index.htmlTable https://www.bco-dmo.org/dataset/658497 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_658497.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_658497&showErrors=false&email= BCO-DMO bcodmo_dataset_658497
log in [Nitrogen isotope fractionation for ammonium assimilation by marine phytoplankton] - Nitrogen isotope fractionation for ammonium assimilation by marine phytoplankton (Biological Nitrogen Isotope Fractionation project) (CAREER: The biological nitrogen isotope systematics of ammonium consumption and production) Results of batch cultures and short-term ammonium (NH4+) uptake experiments were conducted using marine phytoplankton to verify concentration dependence of nitrogen (N) isotope fractionation for NH4+ assimilation.\n\ncdm_data_type = Other\nVARIABLES:\nStrain (unitless)\nExperiment_type (unitless)\nExperiment_number (unitless)\nDate_and_time_EST (unitless)\ntime (Date_and_time_utc, seconds since 1970-01-01T00:00:00Z)\nIncubation_time_in_days (days)\nCell_density (cells mL-1)\nInitial_cell_density (cells mL-1)\nNH4_plus (umol L-1)\nstdev_sigma_NH4_plus (unitless)\nnegative_natural_logarithm_of_NH4_plus (unitless)\ndelta_15NNH4_plus (‰ vs. air)\nstdev_sigma_delta_15NNH4_plus (units)\nf_lnf_1_f (units)\ndelta_15NPON (‰ vs. air)\nLight_conditions (unitless)\nGrowth_stage (unitless)\nNotes (unitless)\n BCO-DMO bcodmo_dataset_864826_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_750823 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_750823.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_750823/ public [Pmin strain feeding 2] - Data from an experiment that measured the occurrence of feeding among 8 Prorocentrum minimum strains on fluorescently labeled bacteria or the cryptophyte Teleaulax amphioxeia (Exploring the physiological and ecological basis of mixotrophy in marine food webs) This dataset contains data from an experiment that measured the occurrence of feeding among 8 Prorocentrum minimum strains on fluorescently labeled bacteria or the cryptophyte Teleaulax amphioxeia.\n\ncdm_data_type = Other\nVARIABLES:\nPrey (unitless)\nStrain (unitless)\ntreatment (unitless)\nrep (unitless)\ncells (unitless)\ncells_feeding (unitless)\npcnt_cells_feeding (unitless)\nGFI (unitless)\nGFI_per_cell (unitless)\nOFI (unitless)\nOFI_per_cell (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_750823_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_750823/index.htmlTable https://www.bco-dmo.org/dataset/750823 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_750823.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_750823&showErrors=false&email= BCO-DMO bcodmo_dataset_750823
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_927507_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_927507_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_927507_v1/ public [Substrate-specific metabolic responses of model marine bacteria using proteomics] - Normalized protein abundance data and protein annotations for proteomic data from laboratory cultures of Ruegeria pomeroyi DSS-3 and Alteromonas macleodii MIT1002 in 2022 (C-CoMP Model Bacteria Physiological Studies) This dataset includes normalized protein abundance data and protein annotations for proteomic data from cultures of Ruegeria pomeroyi DSS-3 and Alteromonas macleodii MIT1002. These model marine bacteria were grown in defined culture media with either glucose, acetate, or a mix of both as carbon substrates. The data are sampled so as to capture the metabolic differences the bacteria employ when catabolizing these different substrates and when switching between them. The raw proteomics files are available on the Proteomics IDEntification Database (PRIDE) under accession PXD045824. The proteomic data accompanies the transcriptomic expression data available at BCO-DMO dataset 916134 (https://www.bco-dmo.org/dataset/916134).\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\nStrain (unitless)\ngene_callers_id (unitless)\nac_mean_abund (unitless)\nglc_mean_abund (unitless)\nlate_mean_abund (unitless)\nearly_mean_abund (unitless)\nSPO_ID_ACCESSION (unitless)\nKOfam_ACCESSION (unitless)\nKEGG_Module (unitless)\nCOG20_FUNCTION (unitless)\nUniprot_accession (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_927507_v1/index.htmlTable https://www.bco-dmo.org/dataset/927507 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_927507_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_927507_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_927507_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_916134_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_916134_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_916134_v1/ public [Substrate-specific metabolic responses of model marine bacteria] - Metadata for transcriptomic expression data from cultures of Ruegeria pomeroyi DSS-3 and Alteromonas macleodii MIT1002 grown in defined culture media with either glucose, acetate, or a mix of both as carbon substrates (C-CoMP Model Bacteria Physiological Studies) This dataset includes metadata for transcriptomic expression data from cultures of Ruegeria pomeroyi DSS-3 and Alteromonas macleodii MIT1002. These model marine bacteria were grown in defined culture media with either glucose, acetate, or a mix of both as carbon substrates. The data are sampled so as to capture the metabolic differences the bacteria employ when catabolizing these different substrates and when switching between them. The raw RNA sequences (50 bp reads in fastq format) have been submitted to the National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA) under BioProject PRJNA972985 (https://www.ncbi.nlm.nih.gov/bioproject/972985).\n\ncdm_data_type = Other\nVARIABLES:\nSample_Name (unitless)\nAccession (unitless)\nBioProject (unitless)\nOrganism (unitless)\nStrain (unitless)\nTax_ID (unitless)\nGlucose_initial_concentration_uM (micromolar concentration)\nAcetate_initial_concentration_uM (micromolar concentration)\nSample_description (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_916134_v1/index.htmlTable https://www.bco-dmo.org/dataset/916134 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_916134_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_916134_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_916134_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_732890 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_732890.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_732890/ public [Symbiodinium Fv/Fm over a temperature gradient] - Fv/Fm for cultured Clade A & B Symbiodinium with 2 treatments measured over a range of temperatures (Coevolution of scleractinian corals and their associated microorganisms) Coral photosynthetic endosymbionts (Symbiodinium) are phylogenetically very diverse, yet the extent of inter- and intraspecific functional variation within clades remains largely underexplored. Understanding this variability will be critical for future research on climate change mediated responses. A properly functioning thylakoid membrane is essential for optimal photosynthetic performance both in free-living and in hospite conditions. Here we analyze the thylakoid membrane melting points of 13  Symbiodinium strains from species in Clades B and A, grown at both control (26 \\u00b0C)  and high temperature (31 \\u00b0C). We observed a broad range of responses to thermal stress regardless of taxonomic rank. Our results support and augment a growing body of literature demonstrating that functional differences among Symbiodinium spp. are as distinct at lower taxonomic levels (i.e. interspecific) as they are among major clades. These findings highlight the importance of assessing the variability of plastid traits across the Symbiodinium tree.\n\ncdm_data_type = Other\nVARIABLES:\nStrain (unitless)\nSpecies (unitless)\nTreatment (unitless)\nReplicate (unitless)\nTemperature (degrees Celsius)\nFv_Fm (dimensionless)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_732890_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_732890/index.htmlTable https://www.bco-dmo.org/dataset/732890 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_732890.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_732890&showErrors=false&email= BCO-DMO bcodmo_dataset_732890
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_926311_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_926311_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_926311_v1/ public [Synechococcus Batch Culture Sampling Data] - Synechococcus batch culture data (cell quotas and ratios (C,N,P), size, and diameter) from laboratory experiments in 2021 to 2022 with related isolates cultured across a range of temperatures (16-25C) (Collaborative Research: The stoichiometric trait distribution of the marine microbiome) Diverse phytoplankton modulate the coupling between the ocean carbon and nutrient cycles through life-history traits such as cell size, elemental quotas, and ratios. Biodiversity is mostly considered at broad functional levels, but major phytoplankton lineages are themselves highly diverse. As an example, Synechococcus is found in nearly all ocean regions, and we demonstrate contains extensive intraspecific variation. Here, we grew four closely related Synechococcus isolates in serially transferred cultures across a range of temperatures (16-25°C) to quantify for the relative role of intraspecific trait variation vs. environmental change. We collected data at the time of sampling, after cultures grew for seven doublings or one month.   Experiments were conducted from September of 2021 to early 2022.\n\nThis dataset includes cell quotas (fmol) for carbon (QC), nitrogen (QN), and phosphorus (QP). It also includes N:P, C:N, and C:P stoichiometry, cell size, and cell diameter (µm) for each Synechococcus strain and clade under each thermal condition.\n\ncdm_data_type = Other\nVARIABLES:\nRep (unitless)\nTemp (degrees Celsius (degC))\nStrain (unitless)\nClade (unitless)\nGR (Growth rate per day (d-1))\nQN (femtomoles (fmol))\nQP (femtomoles (fmol))\nQC (femtomoles (fmol))\nFSCH (unitless)\nCN (unitless)\nNP (unitless)\nCP (unitless)\nCell_Diameter_um (micrometers (um))\nGrams_N (grams (g))\nGrams_P (grams (g))\n... (10 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_926311_v1/index.htmlTable https://www.bco-dmo.org/dataset/926311 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_926311_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_926311_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_926311_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_739636.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_739636 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_739636/ public [Thaumarchaea transcriptomes] - Nitrosopelagicus brevis CN25 and U25 grown in nitrogen replete and deplete conditions, with subsequent transcriptome sequencing and identification. (Gene content, gene expression, and physiology in mesopelagic ammonia-oxidizing archaea) Nitrosopelagicus brevis CN25 and U25 were grown in nitrogen replete and deplete conditions, with subsequent transcriptome sequencing.\n\ncdm_data_type = Other\nVARIABLES:\nAccession (unitless)\nSample_Name (unitless)\nOrganism (unitless)\nTax_ID (unitless)\nStrain (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_739636_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_739636/index.htmlTable https://www.bco-dmo.org/dataset/739636 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_739636.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_739636&showErrors=false&email= BCO-DMO bcodmo_dataset_739636

 
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