Accessing BCO-DMO data
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| griddap | Subset | tabledap | Make A Graph | wms | files | Accessible | Title | Summary | FGDC | ISO 19115 | Info | Background Info | RSS | Institution | Dataset ID | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_922228_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_922228_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_922228_v1/ | public | [Fish Data] - Fish data from fish and seagrass surveys on clusters of artificial reefs at the Abaco Islands, Bahamas in 2022 (Using novel ecosystem-scale experiments to quantify drivers of reef productivity in a heavily impacted coastal ecosystem) | Fish data from fish and seagrass surveys on clusters of artificial reefs at the Abaco Islands, Bahamas in May of 2022. Data are presented for site PN, which was constructed in May 2021 at the Bight of Old Robinson, Great Abaco. At the site three clusters of nine reefs were constructed. Each cluster was separated by at least 150 m and were constructed at ~3 m depth.\n\ncdm_data_type = Other\nVARIABLES:\nObserver (unitless)\nDate (unitless)\ntime_local (Time, unitless)\nAssembly_day (unitless)\nCluster (unitless)\ncluster_lat (degrees_north)\nlongitude (Cluster_lon, degrees_east)\nReef (unitless)\nSpecies (unitless)\nCount (unitless)\nTotal_length (centimeters (cm))\nTransient (unitless)\nFloy_tag (unitless)\nFloy_color (unitless)\nFloy_size (unitless)\nFloy_date (unitless)\nFloy_ID (unitless)\nNotes (unitless)\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_922228_v1/index.htmlTable | https://www.bco-dmo.org/dataset/922228
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_922228_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_922228_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_922228_v1 | |||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_653277 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_653277.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_653277/ | public | [Invasive lionfish density dependence - Growth Persistence] - Experimental results on density dependent loss and growth in invasive red lionfish sampled at Lee Stocking Island, Bahamas in 2011 (Mechanisms and Consequences of Fish Biodiversity Loss on Atlantic Coral Reefs Caused by Invasive Pacific Lionfish) | Experimental results on density dependent loss and growth in invasive red lionfish sampled at Lee Stocking Island, Bahamas in 2011\n\ncdm_data_type = Other\nVARIABLES:\npresence (unitless)\nlionfish_id (unitless)\nreef_number (unitless)\nlionfish_density_initial (count per square meter)\nlionfish_density_mean (count per square meter)\ntag (unitless)\ndate (unitless)\ntotal_length (centimeters)\nmass (grams)\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_653277/index.htmlTable | https://www.bco-dmo.org/dataset/653277
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_653277.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_653277&showErrors=false&email= | BCO-DMO | bcodmo_dataset_653277 | |||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_782247.subset | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_782247 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_782247.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_782247/ | public | [Otolith microstructure] - Otolith microstructure of young-of-year Atlantic silversides (Menidia menidia) from Mumford Cove during 2015 (Collaborative research: Understanding the effects of acidification and hypoxia within and across generations in a coastal marine fish) | Back-calculated age, hatch date, length-at-age, growth rate, and experienced temperature of young-of-year Atlantic silversides (Menidia menidia) collected during 3 successive collections in Mumford Cove, CT in fall 2015.\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\nCollection_Date (unitless)\nIndividual_number (unitless)\nTotal_length (centimeters (cm))\nTotal_length_class (centimeters (cm))\nTotal_length_group (unitless)\nSex (unitless)\nAge (days post hatch)\nHatch_Date (unitless)\nBiweekly_hatch_interval (unitless)\nHatch_check_radius (micrometer (um))\nOtolith_size (micrometer (um))\nHatch_check_flag (unitless)\nOtolith_flag (unitless)\nScaling_factor (unitless)\nIncrement_formation_date (unitless)\nTemperature (degrees Celsius)\nIncrement (Number)\nIncrement_width (micrometer (um))\nLength_at_age (millimeter (mm))\nGrowth_rate (millimeter per day (mm/d))\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_782247/index.htmlTable | https://www.bco-dmo.org/dataset/782247
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_782247.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_782247&showErrors=false&email= | BCO-DMO | bcodmo_dataset_782247 | ||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_945218_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_945218_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_945218_v1/ | public | [Parasite abundance in coral reef fishes] - Parasite abundance data collected from coral reef fishes across 19 islands in the central equatorial Pacific from 2009 to 2021 (Collaborative Research: Decomposing the effects of diversity on the abundance of marine parasites) | The loss of biological diversity is considered one of the principal environmental challenges of the 21st century, and there are hints that this massive reorganization of food webs could affect how parasites are transmitted among hosts. Parasites are often hidden and can be easy to overlook, but they are ecologically important and ubiquitous - so it is important to understand whether we should expect more or fewer of them as biodiversity disappears. Does biodiversity loss increase the abundance of parasites by eroding natural \"checks and balances\" on transmission? Or does it decrease parasite abundance by removing the free-living biodiversity on which parasites depend? Answers to these questions are urgently needed if we are to mitigate or prevent an uptick in parasite transmission for ecosystems experiencing biodiversity loss. \n\nIn a joint collaborative research project among the University of Washington, Scripps Institution of Oceanography at UC San Diego, and California State University Monterey Bay, we created a parasite dataset of unprecedented size and taxonomic resolution. We sampled parasites of coral reef fishes from 19 replicate islands in the central equatorial Pacific to study how biodiversity and parasite burden covary.\n\nIn this dataset, we present all of the data we collected on parasite abundance in coral reef fishes. We sampled 17 species (Acanthurus nigricans, Cephalopholis argus, Cephalopholis urodeta, Chromis iomelas, Chromis margaritifer, Ctenochaetus marginatus, Ctenochaetus striatus, Paracirrhites arcatus, Plectroglyphidodon dickii, Pseudanthias bartlettorum, Pseudanthias dispar, Pseudanthias mooreanus, Pseudanthias olivaceus, Pseudanthias pascalus, Pseudanthias spp., Stegastes aureus, Stegastes fasciolatus) across three archipelagos and 19 islands (Jarvis, Kingman, Kiritimati, Palmyra, Tabuaeran, and Teraina in the Northern Line Islands; Flint, Malden, Millennium, Starbuck, and Vostok in the Southern Line Islands; Huahine, Moorea, Raiatea, Rangiroa, Tahiti, Takapoto, Tetiaroa, and Tikehau in French Polynesia), for a total of 5,251 fish. These 17 broadly distributed host species represent a large spectrum of body sizes, including multiple taxonomic and trophic groups. Included in the dataset are specimens collected from expeditions mounted in 2009, 2010, 2011, 2013, 2019, 2020, and 2021. \n\nFish were collected with three-pronged spears and hand-nets, individually labeled and bagged, and frozen for transport before being thawed and evaluated for parasites. Parasitological dissections were designed to detect all multi-cellular (i.e., metazoan) parasites other than myxozoans, but would not have detected viral, bacterial, protozoal, or fungal parasites. Parasites were identified to the lowest possible taxonomic level and grouped into their broad parasite taxonomic grouping (i.e., Acanthocephalan, Cestoda, Copepoda, Isopoda, Monogenea, Other Crustacea, Trematoda, Nematoda) and transmission strategy (i.e., complex life cycle versus direct transmission).\n\ncdm_data_type = Other\nVARIABLES:\nfish_unique_code (units)\n... (19 more variables)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_945218_v1_fgdc.xml | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_945218_v1_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_945218_v1/index.htmlTable | https://www.bco-dmo.org/dataset/945218
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_945218_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_945218_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_945218_v1 | |||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_719420.subset | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_719420 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_719420.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_719420/ | public | [Survival and size] - Survival, length, and growth responses of M. menidia offspring from different females exposed to contrasting CO2 environments. (Collaborative research: Understanding the effects of acidification and hypoxia within and across generations in a coastal marine fish) | Wild-caught M.\\u00a0menidia\\u00a0adults were spawned to test whether offspring\nfrom different mothers differ in their average survival and size responses to\nelevated CO2\\u00a0conditions.\\u00a0The experiment quantified three related\nsurvival and three size traits for each replicate, female, and\nCO2\\u00a0treatment: embryo survival (fertilization to 1\\u00a0dph), larval\nsurvival (1 to 16\\u00a0dph), and overall survival (fertilization to\n16\\u00a0dph); and size (SL) at hatch (1\\u00a0dph), SL at 16\\u00a0dph, and\nlarval growth rate\\u00a0(GR = (SL16dph\\u00a0\\u2013 SL1dph)/15).\n \nThese data are\\u00a0associated with the corresponding paper:\n \n[Snyder, J.T.*, Murray, C.S.*, and Baumann, H. (2017) Potential for maternal\neffects on offspring CO2-sensitivities in a coastal marine fish. Journal of\nExperimental Marine Biology and Ecology (in\npress).](\\\\https://doi.org/10.1016/j.jembe.2017.11.002\\\\)\n \nOther datasets related to this paper:\n \n[Fatty acid profiles of M. menidia females and their unfertilized\neggs.](\\\\https://www.bco-dmo.org/dataset/719379\\\\)\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\nCollection_site (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nCollection_date (unitless)\nFemale (unitless)\nTotal_length (centimeters)\npH (Sea Water Ph Reported On Total Scale, NIST units)\n... (8 more variables)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_719420_fgdc.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_719420/index.htmlTable | https://www.bco-dmo.org/dataset/719420
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_719420.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_719420&showErrors=false&email= | BCO-DMO | bcodmo_dataset_719420 |