![]() |
BCO-DMO ERDDAP
Accessing BCO-DMO data |
log in
Brought to you by BCO-DMO |
griddap | Subset | tabledap | Make A Graph | wms | files | Accessible | Title | Summary | FGDC | ISO 19115 | Info | Background Info | RSS | Institution | Dataset ID | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_952687_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_952687_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_952687_v1/ | public | [CTD bottle data from RR2201] - CTD bottle data collected from R/V Roger Revelle cruise RR2201 in the Argo Basin in the Indian Ocean from February to March of 2022 (Collaborative Research: Mesoscale variability in nitrogen sources and food-web dynamics supporting larval southern bluefin tuna in the eastern Indian Ocean) | This dataset contains a compilation of CTD bottle sensor values from theR/V Roger Revelle's Indian Ocean cruise RR2201. Data were compiled after export from SBE Processing Tools in R, QA/QC'd based on downcast profiles. All sensors used provided calibration coefficients except for fluorescence, which was calibrated based on in situ chlorophyll-a extractions.\n\ncdm_data_type = Other\nVARIABLES:\ntime (Datetimeutc, seconds since 1970-01-01T00:00:00Z)\ncast (unitless)\ncruise (unitless)\ntransect (unitless)\nevent (unitless)\nstation (unitless)\nlongitude (degrees_east)\nlatitude (degrees_north)\nbottle (unitless)\ndepth (m)\npressure (decibels (db))\ntemperature (degrees Celsius (degC))\nsalinity (Practical Salinity Units (PSU))\ndensity (kilograms per cubic meter (kg m-3))\ntransmission (per meter (m-1))\noxygen (micromoles of oxygen per kilogram (umol O2 kg-1))\noxygenSaturation (unitless)\npar (micromoles of photons per meter squared per second (umol photons m-2 s-1))\nfluorescence (milligrams of chlorophyll a per cubic meter (mg chl-a m-3))\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_952687_v1_fgdc.xml | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_952687_v1_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_952687_v1/index.htmlTable | https://www.bco-dmo.org/dataset/952687![]() | https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_952687_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_952687_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_952687_v1 | |||
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_952677_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_952677_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_952677_v1/ | public | [CTD downcast from RR2201] - CTD downcast data collected from R/V Roger Revelle cruise RR2201 in the Argo Basin in the Indian Ocean from February to March of 2022 (Collaborative Research: Mesoscale variability in nitrogen sources and food-web dynamics supporting larval southern bluefin tuna in the eastern Indian Ocean) | This dataset contains a compilation of CTD downcast data from the R/V Roger Revelle's Indian Ocean cruise RR2201. Data were visually and statistically QA/QC'd in R after export from SBE Processing Tools. Data were not binned due to very coarse resolution of raw data (approximately 1 m). All sensors used provided calibration coefficients except for fluorescence, which was calibrated based on in situ chlorophyll-a extractions.\n\ncdm_data_type = Other\nVARIABLES:\ntime (Datetimeutc, seconds since 1970-01-01T00:00:00Z)\ncast (unitless)\ncruise (unitless)\ntransect (unitless)\nevent (unitless)\nstation (unitless)\nlongitude (degrees_east)\nlatitude (degrees_north)\ndepth (m)\npressure (decibels (db))\ntemperature (degrees Celsius (degC))\nsalinity (Practical Salinity Units (PSU))\ndensity (kilograms per cubic meter (kg m-3))\ntransmission (per meter (m-1))\noxygen (micromoles of oxygen per kilogram (umol O2 kg-1))\noxygenSaturation (unitless)\npar (micromoles of photons per meter squared per second (umol photons m-2 s-1))\nfluorescence (milligrams of chlorophyll a per cubic meter (mg chl-a m-3))\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_952677_v1_fgdc.xml | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_952677_v1_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_952677_v1/index.htmlTable | https://www.bco-dmo.org/dataset/952677![]() | https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_952677_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_952677_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_952677_v1 | |||
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_772513 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_772513.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_772513/ | public | [Discrete Samples] - DIC, TA, pH from R/V Pelican cruise conducted in the northern Gulf of Mexico in April and July 2017 (Collaborative Research: pH Dynamics and Interactive Effects of Multiple Processes in a River-Dominated Eutrophic Coastal Ocean) | Dissolved inorganic carbon, total alkalinity and pH from R/V Pelican cruises conducted in the northern Gulf of Mexico (27.5 N, 30 N, 88 W, 94 W ) from April 5 to 16 and July 7 to 21 in 2017\n\ncdm_data_type = Other\nVARIABLES:\nCruise (unitless)\nDate (unitless)\ntime2 (Time, unitless)\nStation (unitless)\nlongitude (degrees_east)\nlatitude (degrees_north)\ndepth (Bottom Depth, m)\nSample_Depth (meter (m))\nTemperature (degrees Celsius (°C))\nSalinity (Sea Water Practical Salinity, PSU)\nOxygenSBE1 (Oxygen SBE1, micromole per kilogram (umol/kg))\nOxygenSBE2 (Oxygen SBE2, milligram per liter (mg/L))\nFluorescenceChl (Fluorescence Chl, microgram per liter (ug/L))\nwetCDOM (Wet CDOM, milligram per cubic meters (mg/m^3))\nSPAR (microEinsteins per square meter per second (uEinsteins/m^2/second))\nPAR (Downwelling Photosynthetic Photon Radiance In Sea Water, microEinsteins per square meter per second (uEinsteins/m^2/second))\nTurbidity (FTU)\nAttenuation (1 per meter (1/m))\nTransmission (%)\nTA (micromole per kilogram (umol/kg))\nflag_TA (unitless)\nDIC (micromole per kilogram (umol/kg))\nflag_DIC (unitless)\npH_Electrode (P H Electrode, unitless)\nflag_pHelec (Flag P Helec, unitless)\npH_Spec (P H Spec, unitless)\n... (4 more variables)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_772513_fgdc.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_772513/index.htmlTable | https://www.bco-dmo.org/dataset/772513![]() | https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_772513.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_772513&showErrors=false&email= | BCO-DMO | bcodmo_dataset_772513 | ||||
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_739892 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_739892.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_739892/ | public | [Light intensity at depth] - Measurements of light intensity (PAR) underwater (19 m depth) in St. John, US Virgin Islands from 2014-2017. (Collaborative research: Ecology and functional biology of octocoral communities) | Light measured at depth (19 m) in Great Lameshur Bay, St. John using a cosine-corrected sensor with wiper. These data describe the core data in the manuscript and come from an Alec (brand) light sensor installed at 19 m depth.\n\ncdm_data_type = Other\nVARIABLES:\nDate (unitless)\ntime2 (Time, unitless)\nBurst_average (umol photons per square meter per second)\nSurface (umol photons per square meter per second)\nTransmission (percent)\nNoon_percent (percent)\nKd_PAR (umol photons per square meter per second)\nNoon_Kd (umol photons per square meter per second)\ntime (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_739892/index.htmlTable | https://www.bco-dmo.org/dataset/739892![]() | https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_739892.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_739892&showErrors=false&email= | BCO-DMO | bcodmo_dataset_739892 | |||||
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_945218_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_945218_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_945218_v1/ | public | [Parasite abundance in coral reef fishes] - Parasite abundance data collected from coral reef fishes across 19 islands in the central equatorial Pacific from 2009 to 2021 (Collaborative Research: Decomposing the effects of diversity on the abundance of marine parasites) | The loss of biological diversity is considered one of the principal environmental challenges of the 21st century, and there are hints that this massive reorganization of food webs could affect how parasites are transmitted among hosts. Parasites are often hidden and can be easy to overlook, but they are ecologically important and ubiquitous - so it is important to understand whether we should expect more or fewer of them as biodiversity disappears. Does biodiversity loss increase the abundance of parasites by eroding natural \"checks and balances\" on transmission? Or does it decrease parasite abundance by removing the free-living biodiversity on which parasites depend? Answers to these questions are urgently needed if we are to mitigate or prevent an uptick in parasite transmission for ecosystems experiencing biodiversity loss. \n\nIn a joint collaborative research project among the University of Washington, Scripps Institution of Oceanography at UC San Diego, and California State University Monterey Bay, we created a parasite dataset of unprecedented size and taxonomic resolution. We sampled parasites of coral reef fishes from 19 replicate islands in the central equatorial Pacific to study how biodiversity and parasite burden covary.\n\nIn this dataset, we present all of the data we collected on parasite abundance in coral reef fishes. We sampled 17 species (Acanthurus nigricans, Cephalopholis argus, Cephalopholis urodeta, Chromis iomelas, Chromis margaritifer, Ctenochaetus marginatus, Ctenochaetus striatus, Paracirrhites arcatus, Plectroglyphidodon dickii, Pseudanthias bartlettorum, Pseudanthias dispar, Pseudanthias mooreanus, Pseudanthias olivaceus, Pseudanthias pascalus, Pseudanthias spp., Stegastes aureus, Stegastes fasciolatus) across three archipelagos and 19 islands (Jarvis, Kingman, Kiritimati, Palmyra, Tabuaeran, and Teraina in the Northern Line Islands; Flint, Malden, Millennium, Starbuck, and Vostok in the Southern Line Islands; Huahine, Moorea, Raiatea, Rangiroa, Tahiti, Takapoto, Tetiaroa, and Tikehau in French Polynesia), for a total of 5,251 fish. These 17 broadly distributed host species represent a large spectrum of body sizes, including multiple taxonomic and trophic groups. Included in the dataset are specimens collected from expeditions mounted in 2009, 2010, 2011, 2013, 2019, 2020, and 2021. \n\nFish were collected with three-pronged spears and hand-nets, individually labeled and bagged, and frozen for transport before being thawed and evaluated for parasites. Parasitological dissections were designed to detect all multi-cellular (i.e., metazoan) parasites other than myxozoans, but would not have detected viral, bacterial, protozoal, or fungal parasites. Parasites were identified to the lowest possible taxonomic level and grouped into their broad parasite taxonomic grouping (i.e., Acanthocephalan, Cestoda, Copepoda, Isopoda, Monogenea, Other Crustacea, Trematoda, Nematoda) and transmission strategy (i.e., complex life cycle versus direct transmission).\n\ncdm_data_type = Other\nVARIABLES:\nfish_unique_code (units)\n... (19 more variables)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_945218_v1_fgdc.xml | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_945218_v1_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_945218_v1/index.htmlTable | https://www.bco-dmo.org/dataset/945218![]() | https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_945218_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_945218_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_945218_v1 |