Accessing BCO-DMO data
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BCO-DMO ERDDAP
Accessing BCO-DMO data |
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| griddap | Subset | tabledap | Make A Graph | wms | files | Accessible | Title | Summary | FGDC | ISO 19115 | Info | Background Info | RSS | Institution | Dataset ID | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_652849 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_652849.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_652849/ | public | [Coral-bacterioplankton data from mesocosm experiments] - Bacterioplankton data from coral and coral mucus aquaria experiments conducted at Bermuda Institute of Ocean Sciences in 2013 (Fundamental Coral-Microbial Associations) | Bacterioplankton data from coral and coral mucus aquaria experiments conducted at Bermuda Institute of Ocean Sciences in 2013\n\ncdm_data_type = Other\nVARIABLES:\ntreatment (unitless)\ntreatment_description (unitless)\ntank (unitless)\nmesocosm (unitless)\ntimepoint_name (days)\ntimepoint_days (days)\ntemp (Temperature, celsius)\nsalinity (Sea Water Practical Salinity, ppt)\nDAPI_count (cells per milliliter)\naccession_number (unitless)\nnonPigmentPico (Non Pigment Pico, cells per milliliter)\nsynechococcus (cells per milliliter)\npicoeukaryote (cells per milliliter)\nlowHeterotrophicBac (Low Heterotrophic Bac, cells per milliliter)\nhighHeterotrophicBac (High Heterotrophic Bac, cells per milliliter)\nSAR11 (cells per milliliter)\nrhodobacteracea (cells per milliliter)\nalteromonas (cells per milliliter)\nvibrio (cells per milliliter)\nthaumarchaeota (cells per milliliter)\neuryarchaeota (cells per milliliter)\nP04 (micromoles)\nN03_N02 (micromoles)\nSi04 (micromoles)\nN02 (micromoles)\nNH4 (Mole Concentration Of Ammonium In Sea Water, micromoles)\n... (9 more variables)\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_652849/index.htmlTable | https://www.bco-dmo.org/dataset/652849
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_652849.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_652849&showErrors=false&email= | BCO-DMO | bcodmo_dataset_652849 | |||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_880924_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_880924_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_880924_v1/ | public | [Effects of protists on HBx predation] - Population changes in Halobacteriovorax cultured with protist & prey (Excellence in Research: Assessing the Control by Multiple Micropredators on Bacterial Communities in Estuarine Environments and Characterization of Prey Lysis Products Resulting from Each Predator) | Here, we investigate the growth trajectory and predation dynamics of protists, and HBx micro-predators in co-culture with a common prey, V. parahaemolyticus, in a time-series study in marine water microcosms. The microcosms were established with water samples collected from the Apalachicola Bay in northwest Florida, USA and amended with a suspension of prey bacteria. Samples were taken at a high temporal resolution (3-hour intervals for 5 days) to capture detailed measurements and changes in the growth responses of HBx and protists, using both culture- and molecular-based methods. The protists were counted by qPCR and flow cytometry. The HBx were counted by qPCR and a culture plating method\n\ncdm_data_type = Other\nVARIABLES:\nTreatment (unitless)\nTime (hours)\nOptical_Density (OD units)\nProtists (counts per ml)\nVibrio (gene copies per reaction)\nHalobacteriovorax (gene copies per reaction)\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_880924_v1/index.htmlTable | https://www.bco-dmo.org/dataset/880924
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_880924_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_880924_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_880924_v1 | |||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_663707 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_663707.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_663707/ | public | [Field collections: all data] - Nutrient concentrations, microbiology (Vibrio abundance), trace metals, and environmental conditions from collection sites in the Florida Keys National Marine Sanctuary, 2014-2016 (Vibrio as a model microbe for opportunistic heterotrophic response to Saharan dust deposition events in marine waters) | Nutrient concentrations, microbiology (Vibrio abundance), trace metals, and environmental conditions from collection sites in the Florida Keys National Marine Sanctuary, 2014-2016.\n\ncdm_data_type = Other\nVARIABLES:\nsample (unitless)\ndate (year-month-day)\ntime_start_local (hours:minutes)\ndepth (m)\nlocation (unitless)\nstation_notes (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ntemp (Temperature, degrees Celsius)\nsal (Practical Salinity Units (PSU))\npH (Sea Water Ph Reported On Total Scale, unitless; pH scale)\nVibrio (colony forming units/milliliter (CFU/ml))\nChl_a (Concentration Of Chlorophyll In Sea Water, micrograms/liter (ug/ml))\nDOC (micromoles/liter (ug/ml))\nTDN (micromoles/liter (ug/ml))\nDON (micromoles/liter (ug/ml))\nNH4 (Mole Concentration Of Ammonium In Sea Water, micromoles/liter (ug/ml))\nNO3 (micromoles/liter (ug/ml))\nNO2 (Mole Concentration Of Nitrite In Sea Water, micromoles/liter (ug/ml))\nOrthophosphate (micromoles/liter (ug/ml))\nSiO4 (Si O4, micromoles/liter (ug/ml))\ndFe (D Fe, nanomoles/liter (ug/ml))\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_663707_fgdc.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_663707/index.htmlTable | https://www.bco-dmo.org/dataset/663707
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_663707.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_663707&showErrors=false&email= | BCO-DMO | bcodmo_dataset_663707 | ||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_682298 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_682298.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_682298/ | public | [Seeded microcosm experiments: all data] - Nutrients, microbiology, trace metals, and environmental conditions from seeded microcosm experiments (Vibrio as a model microbe for opportunistic heterotrophic response to Saharan dust deposition events in marine waters) | Nutrients, microbiology, trace metals, and environmental conditions from seeded microcosm experiments.\n\ncdm_data_type = Other\nVARIABLES:\nyear (year)\nexpt (unitless)\ntreatment (unitless)\nlight_dark (unitless)\nvessel (unitless)\nreplicate (unitless)\ntime_elapsed_hr (hours)\nsample (unitless)\nVibrio (colony forming units/milliliter (CFU/ml))\nChl_a (Concentration Of Chlorophyll In Sea Water, microgram/liter (ug/L))\nDOC (micromol/liter C (umol/L))\nDON (micromol/liter N (umol/L))\nNH4 (micromol/liter N (umol/L))\nNO3 (micromol/liter N (umol/L))\nNO2 (Mole Concentration Of Nitrite In Sea Water, micromol/liter N (umol/L))\nOrthophosphate (micromol/liter P (umol/L))\nSiO4 (Si O4, micromol/liter Si (umol/L))\ndFe (D Fe, nanoMolar (nM))\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_682298/index.htmlTable | https://www.bco-dmo.org/dataset/682298
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_682298.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_682298&showErrors=false&email= | BCO-DMO | bcodmo_dataset_682298 |