Accessing BCO-DMO data
Brought to you by BCO-DMO
|
|
BCO-DMO ERDDAP
Accessing BCO-DMO data |
log in
Brought to you by BCO-DMO |
| griddap | Subset | tabledap | Make A Graph | wms | files | Accessible | Title | Summary | FGDC | ISO 19115 | Info | Background Info | RSS | Institution | Dataset ID | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_908026_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_908026_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_908026_v1/ | public | [Reef seawater biogeochemistry from the Jardines de la Reina reef-system] - Reef seawater biogeochemistry data from samples collected in the Jardines de la Reina reef-system, Cuba in November of 2017 (Signature exometabolomes of Caribbean corals and influences on reef picoplankton) | Reef depth and reef surface seawater samples were collected from reefs in Jardines de la Reina and subjected to targeted and untargeted liquid chromatography mass spectrometry (LC-MS) methods in addition to a suite of biogeochemical measurements (inorganic and organic nutrient concentrations, microbial cell abundances, chlorophyll a concentrations, and physicochemical properties). \nRaw and .mzML data files from the LC-MS methods are located at MetaboLights database, using accession number MTBLS1820. The link is: https://www.ebi.ac.uk/metabolights/MTBLS1820/.\n\nThese data were published in Weber et al. (2020).\n\ncdm_data_type = Other\nVARIABLES:\nreef (unitless)\nsite (unitless)\ndate (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndepth (m)\nbiome (unitless)\nsampling_depth (unitless)\ngrouping (unitless)\nDOC (micro molar (uM))\nDN (micro molar (uM))\nTOC (micro molar (uM))\nTN (micro molar (uM))\nPro (cells per mL)\nSyn (cells per mL)\nPico (cells per mL)\nHbact (cells per mL)\nTotalcells (cells per mL)\nPO4 (micro molar (uM))\nSI (micro molar (uM))\n... (11 more variables)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_908026_v1_fgdc.xml | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_908026_v1_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_908026_v1/index.htmlTable | https://www.bco-dmo.org/dataset/908026
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_908026_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_908026_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_908026_v1 | |||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_783679.subset | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_783679 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_783679.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_783679/ | public | [Tidal study of seawater microbial communities] - Flow cytometry and nutrient analyses data from a tidal study over 48 hours of mangrove, seagrass, and seawater from the US Virgin Islands in July of 2017 (Signature exometabolomes of Caribbean corals and influences on reef picoplankton) | Data from a tidal study over 48 hours of mangrove, seagrass, and seawater from the US Virgin Islands in 2017. These data include tidal height, depth, temperature, salinity, Prochlorococcus counts, Synechococcus counts, Picoeukaryote abundances, nutrient concentrations at accession numbers for sequences at The National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA).\n\ncdm_data_type = Other\nVARIABLES:\nSample_ID (unitless)\nNCBI_BioProject_accession_number (NCBI Bio Project Accession Number, unitless)\nNCBI_BioSample_accession_number (NCBI Bio Sample Accession Number, unitless)\nSample_type (unitless)\nSequencing_Strategy (unitless)\nSequencing_Instrument_model (unitless)\nSequencing_strategy (unitless)\nSite_Name (unitless)\nBiome (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nCollection_Date (unitless)\nCollection_Time (unitless)\ntime (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)\nTide (unitless)\nTide_Height (Sea Surface Height, meters (m))\nTime_elapsed_between_tide_timepoint_and_collection (Sea Surface Height, minutes)\ndepth (Collection Depth, m)\nSite_Depth (meters (m))\nTemperature (degrees Celsius (ºC))\nSalinity (Sea Water Practical Salinity, Practical Salinity Units (PSU))\nProchlorococcus (cells per milliliter (cells/ml))\nSynechococcus (cells per milliliter (cells/ml))\n... (7 more variables)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_783679_fgdc.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_783679/index.htmlTable | https://www.bco-dmo.org/dataset/783679
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_783679.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_783679&showErrors=false&email= | BCO-DMO | bcodmo_dataset_783679 |