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BCO-DMO ERDDAP
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| griddap | Subset | tabledap | Make A Graph | wms | files | Accessible | Title | Summary | FGDC | ISO 19115 | Info | Background Info | RSS | Institution | Dataset ID | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_927507_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_927507_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_927507_v1/ | public | [Substrate-specific metabolic responses of model marine bacteria using proteomics] - Normalized protein abundance data and protein annotations for proteomic data from laboratory cultures of Ruegeria pomeroyi DSS-3 and Alteromonas macleodii MIT1002 in 2022 (C-CoMP Model Bacteria Physiological Studies) | This dataset includes normalized protein abundance data and protein annotations for proteomic data from cultures of Ruegeria pomeroyi DSS-3 and Alteromonas macleodii MIT1002. These model marine bacteria were grown in defined culture media with either glucose, acetate, or a mix of both as carbon substrates. The data are sampled so as to capture the metabolic differences the bacteria employ when catabolizing these different substrates and when switching between them. The raw proteomics files are available on the Proteomics IDEntification Database (PRIDE) under accession PXD045824. The proteomic data accompanies the transcriptomic expression data available at BCO-DMO dataset 916134 (https://www.bco-dmo.org/dataset/916134).\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\nStrain (unitless)\ngene_callers_id (unitless)\nac_mean_abund (unitless)\nglc_mean_abund (unitless)\nlate_mean_abund (unitless)\nearly_mean_abund (unitless)\nSPO_ID_ACCESSION (unitless)\nKOfam_ACCESSION (unitless)\nKEGG_Module (unitless)\nCOG20_FUNCTION (unitless)\nUniprot_accession (unitless)\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_927507_v1/index.htmlTable | https://www.bco-dmo.org/dataset/927507
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_927507_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_927507_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_927507_v1 |