![]() |
BCO-DMO ERDDAP
Accessing BCO-DMO data |
log in
Brought to you by BCO-DMO |
griddap | Subset | tabledap | Make A Graph | wms | files | Accessible | Title | Summary | FGDC | ISO 19115 | Info | Background Info | RSS | Institution | Dataset ID | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_955739_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_955739_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_955739_v1/ | public | [Acarta tonsa and A. hudsonica seasonal thermal limits (LD50)] - Upper thermal limits (LD50) for two common coastal copepods during thermal experiments with individuals collected from Long Island Sound between July 2017 and November 2019 (Linking eco-evolutionary dynamics of thermal adaptation and grazing in copepods from highly seasonal environments) | These data include estimates of upper thermal limits for two common coastal copepods collected from Long Island Sound between July 2017 and November 2019. Individual survival measurements were made for both field and laboratory acclimated individuals exposed to temperatures ranging from 10°C to 39°C. These data highlight how acclimation and rapid adaptation may influence responses of populations to rapid climate change. Data were collected by Dr. Matthew Sasaki at the University of Connecticut.\n\ncdm_data_type = Other\nVARIABLES:\nspecies (unitless)\nacclimation (unitless)\ncollection_id (unitless)\ncollection_date (unitless)\ncollection_month (unitless)\ncollection_year (unitless)\ncollection_temp (degrees Celsius)\nacclimation_temp (degrees Celsius)\nLD50 (degrees Celsius)\nSE (degrees Celsius)\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_955739_v1/index.htmlTable | https://osprey.bco-dmo.org/dataset/955739![]() | https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_955739_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_955739_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_955739_v1 | |||||
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_945915_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_945915_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_945915_v1/ | public | [Metagenome sequencing samples] - Contextual data for samples collected for metagenome sequencing from the deep subseafloor biosphere as accessed via CORKs along the Juan de Fuca Ridge flank in the Northeast Pacific Ocean between 2008 and 2014 (Collaborative Research: Illuminating microbes and their viruses within the dark ocean crust through strain-level approaches) | This dataset provides contextual information about samples used for metagenome sequencing. These samples were collected from pristine crustal fluids sampled via CORK observatories along the Juan de Fuca Ridge flank in the Northeast Pacific Ocean off the coast of North America. Also included are metadata for seawater and sediment metagenomes that have been sequenced as controls. All of the data are publicly available via the National Center for Biotechnology Information (NCBI) accession numbers provided in the dataset (BioProject numbers PRJNA655018 to PRJNA655040).\n\ncdm_data_type = Other\nVARIABLES:\nSample_Type (unitless)\nSample_Name (unitless)\nDNA_Isolation_Method (unitless)\nCollection_Date (unitless)\nCollection_Year (unitless)\nCollection_Month (unitless)\nCollection_Day (unitless)\nSample_Source (unitless)\nFluid_Delivery_Line (unitless)\nEnvironment (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nDepth (msb)\nArea (unitless)\nFull_Sample_Name_and_Description (unitless)\nIMG_Genome_ID (unitless)\nNCBI_Bioproject_Accession (unitless)\nNCBI_Biosample_Accession (unitless)\nSRA_ID (unitless)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_945915_v1_fgdc.xml | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_945915_v1_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_945915_v1/index.htmlTable | https://www.bco-dmo.org/dataset/945915![]() | https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_945915_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_945915_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_945915_v1 | |||
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_907880_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_907880_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_907880_v1/ | public | [Neocalanus flemingeri lipid fullness] - Post-diapause Neocalanus flemingeri females morphometric measurements and calculations of lipid fullness and lipid volume taken from the R/V Sikuliaq and the R/V Tiglax in the Northern Gulf of Alaska from 2019-06-30 to 2019-09-13 (Collaborative Proposal: Optimizing Recruitment of Neocalanus copepods through Strategic Timing of Reproduction and Growth in the Gulf of Alaska) | Morphometric data on Neocalanus flemingeri females were made on individuals collected in diapause in June and September, 2019 and after incubation in the laboratory for up to 4.5 weeks. Collections were made from depth in Prince William Sound in the Gulf of Alaska during two NGA LTER cruises. After sorting, females were incubated in flasks at 4-6ºC for up to 4.5 weeks. Individuals were removed for imaging and experimental incubations to study oocyte production. Morphometric analysis was used to measure prosome length and area as well as lipid sac area for lipid fullness and lipid volume calculations. Lipid consumption during diapause was minimal and modest initially.\n\ncdm_data_type = Other\nVARIABLES:\nStation (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nDate_collected (unitless)\nCollection_month (unitless)\nSpecies (unitless)\nSex (unitless)\nEdU_sample_ID_number (unitless)\nUsed_in_EdU_experiments (unitless)\nLength_of_EdU_incubation_in_hours (hours)\nImage_number_light_microscope (unitless)\nDate_image_was_taken (unitless)\nTime_point (hours or weeks)\nTime_point_in_days (days)\nProsome_length (millimeters (mm))\nProsome_area (square millimeters (mm^2))\nLipid_area (square millimeters (mm^2))\nLipid_volume (milligrams (mg))\nLipid_fullness_percentage (percent (%))\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_907880_v1_fgdc.xml | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_907880_v1_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_907880_v1/index.htmlTable | https://www.bco-dmo.org/dataset/907880![]() | https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_907880_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_907880_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_907880_v1 | |||
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_908514_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_908514_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_908514_v1/ | public | [Neocalanus flemingeri oocyte production] - Oocytes formation in post-diapause Neocalanus flemingeri females from the R/V Sikuliaq and the R/V Tiglax in the Northern Gulf of Alaska from 2019-06-30 to 2019-09-13 (Collaborative Proposal: Optimizing Recruitment of Neocalanus copepods through Strategic Timing of Reproduction and Growth in the Gulf of Alaska) | These data are from a study on the formation of oocytes in post-diapause Neocalanus flemingeri females collected from depth in Prince William Sound in the Gulf of Alaska. Collections were made during two NGA LTER cruises. After sorting, females were incubated in flasks and removed for experimental incubations and imaging. Oocyte production by post-diapause females that involved DNA replication in the ovary and oviducts was examined using incubation in 5-Ethynyl-2'-deoxyuridine (EdU). Both oogonia and oocytes incorporated EdU, with the number of EdU labeled cells peaking at 72 hours following diapause termination. Cells labeling with EdU remained high for two weeks, decreasing thereafter with no labeling detected by four weeks post diapause, and three to four weeks before spawning of the first clutch of eggs. By limiting DNA replication to the initial phase, the females effectively separate oocyte production from oocyte provisioning.\n\ncdm_data_type = Other\nVARIABLES:\nStation (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nDate_collected (unitless)\nCollection_month (unitless)\nSpecies (unitless)\nSex (unitless)\nEdU_sample_ID_number (unitless)\nAmount_of_EdU (milligrams (mg))\nIncubation_date_at_start (unitless)\nLength_of_EdU_incubation_in_hours (hours)\nTime_point_in_days (days)\nNumber_of_cells_replicating (unitless)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_908514_v1_fgdc.xml | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_908514_v1_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_908514_v1/index.htmlTable | https://www.bco-dmo.org/dataset/908514![]() | https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_908514_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_908514_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_908514_v1 |