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BCO-DMO ERDDAP
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| griddap | Subset | tabledap | Make A Graph | wms | files | Accessible | Title | Summary | FGDC | ISO 19115 | Info | Background Info | RSS | Institution | Dataset ID | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_955739_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_955739_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_955739_v1/ | public | [Acarta tonsa and A. hudsonica seasonal thermal limits (LD50)] - Upper thermal limits (LD50) for two common coastal copepods during thermal experiments with individuals collected from Long Island Sound between July 2017 and November 2019 (Linking eco-evolutionary dynamics of thermal adaptation and grazing in copepods from highly seasonal environments) | These data include estimates of upper thermal limits for two common coastal copepods collected from Long Island Sound between July 2017 and November 2019. Individual survival measurements were made for both field and laboratory acclimated individuals exposed to temperatures ranging from 10°C to 39°C. These data highlight how acclimation and rapid adaptation may influence responses of populations to rapid climate change. Data were collected by Dr. Matthew Sasaki at the University of Connecticut.\n\ncdm_data_type = Other\nVARIABLES:\nspecies (unitless)\nacclimation (unitless)\ncollection_id (unitless)\ncollection_date (unitless)\ncollection_month (unitless)\ncollection_year (unitless)\ncollection_temp (degrees Celsius)\nacclimation_temp (degrees Celsius)\nLD50 (degrees Celsius)\nSE (degrees Celsius)\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_955739_v1/index.htmlTable | https://osprey.bco-dmo.org/dataset/955739
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_955739_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_955739_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_955739_v1 | |||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_928636_v1 | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_928636_v1/ | public | [Ca. Aquarickettsia rohweri transcriptomes] - Sampling and experimental metadata related to 'Candidatus' Aquarickettsia rohweri transcriptome data from host Acropora cervicornis colonies collected at Looe Key, Lower Florida Keys from Apr to Jun of 2019 (Collaborative Research: Tracking the interacting roles of the environment, host genotype, and a novel Rickettsiales in coral disease susceptibility) | This dataset contains sampling and experimental metadata related to 'Candidatus' Aquarickettsia rohweri transcriptome sequences housed at the National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA) under BioProject PRJNA1048415. All host colonies (Acropora cervicornis genotype ML-50) were collected from the same location, the Mote Marine Laboratory in situ coral nursery in Looe Key, Lower Florida Keys between April and June of 2019.\n\nThe Rickettsiales-like bacterial parasite, 'Candidatus' Aquarickettsia rohweri (NCBI:txid2602574) is a ubiquitous coral symbiont that is strongly linked to coral disease susceptibility in staghorn coral, and is undergoing positive selection across the Caribbean. Although ‘Ca.' A. rohweri is a putative parasite, little is known about the activity of this bacterium in coral tissue. We performed a transcriptomic analyses of ‘Ca.' A. rohweri populations during a 6-week nutrient exposure experiment. ‘Ca.' A. rohweri energy scavenging genes and those potentially involved during habitat transition are significantly upregulated during enrichment. Specifically, transcripts involved in signaling, virulence, two-component systems, and nutrient import genes are elevated under higher nutrients. These data support the predicted role of ‘Ca.' A. rohweri as a highly active nutrient-responsive A. cervicornis parasite and provide a glimpse at the mechanism of induced disease susceptibility while implicating nutrient exposure in its horizontal transmission.\n\ncdm_data_type = Other\nVARIABLES:\nSample_name (unitless)\nBioSample_Accession (unitless)\nSRA (unitless)\nBioProject (unitless)\nData_Type (unitless)\nScope (unitless)\nOrganism (unitless)\nCollected_Host_Organism (unitless)\nStrain (unitless)\nisolation_source (unitless)\nCollection_Year (unitless)\nCollection_date_note (unitless)\nTreatment (unitless)\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_928636_v1/index.htmlTable | https://osprey.bco-dmo.org/dataset/928636
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_928636_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_928636_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_928636_v1 | ||||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_945915_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_945915_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_945915_v1/ | public | [Metagenome sequencing samples] - Contextual data for samples collected for metagenome sequencing from the deep subseafloor biosphere as accessed via CORKs along the Juan de Fuca Ridge flank in the Northeast Pacific Ocean between 2008 and 2014 (Collaborative Research: Illuminating microbes and their viruses within the dark ocean crust through strain-level approaches) | This dataset provides contextual information about samples used for metagenome sequencing. These samples were collected from pristine crustal fluids sampled via CORK observatories along the Juan de Fuca Ridge flank in the Northeast Pacific Ocean off the coast of North America. Also included are metadata for seawater and sediment metagenomes that have been sequenced as controls. All of the data are publicly available via the National Center for Biotechnology Information (NCBI) accession numbers provided in the dataset (BioProject numbers PRJNA655018 to PRJNA655040).\n\ncdm_data_type = Other\nVARIABLES:\nSample_Type (unitless)\nSample_Name (unitless)\nDNA_Isolation_Method (unitless)\nCollection_Date (unitless)\nCollection_Year (unitless)\nCollection_Month (unitless)\nCollection_Day (unitless)\nSample_Source (unitless)\nFluid_Delivery_Line (unitless)\nEnvironment (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nDepth (msb)\nArea (unitless)\nFull_Sample_Name_and_Description (unitless)\nIMG_Genome_ID (unitless)\nNCBI_Bioproject_Accession (unitless)\nNCBI_Biosample_Accession (unitless)\nSRA_ID (unitless)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_945915_v1_fgdc.xml | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_945915_v1_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_945915_v1/index.htmlTable | https://www.bco-dmo.org/dataset/945915
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_945915_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_945915_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_945915_v1 |