Accessing BCO-DMO data
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BCO-DMO ERDDAP
Accessing BCO-DMO data |
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| griddap | Subset | tabledap | Make A Graph | wms | files | Accessible | Title | Summary | FGDC | ISO 19115 | Info | Background Info | RSS | Institution | Dataset ID | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_770442.subset | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_770442 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_770442.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_770442/ | public | [Moorea lagoon bleaching] - Coral bleaching prevalence in the lagoon of Moorea during 2016 (CAREER: Fish-derived nutrients in a coral reef ecosystem - impacts on benthic communities and importance for coral restoration) | Coral bleaching prevalence in the lagoon of Moorea during 2016\n\ncdm_data_type = Other\nVARIABLES:\nCOUNTRY (unitless)\nLOCATION (unitless)\nSITE_NAME (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nDAY (unitless)\nMONTH (unitless)\nYEAR (unitless)\nDATE (unitless)\ndepth (m)\nPERCENT_BLEACHED (percent)\nMORTALITY_CODE (unitless)\nPERCENT_MORTALITY (percent)\nSURVEY_TYPE (unitless)\nWATER_TEMPERATURE (Celsius)\nTEMPERATURE_DEPTH (meters (m))\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_770442_fgdc.xml | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_770442_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_770442/index.htmlTable | https://www.bco-dmo.org/dataset/770442
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_770442.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_770442&showErrors=false&email= | BCO-DMO | bcodmo_dataset_770442 | ||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_555780 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_555780.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_555780/ | public | [rocky intertidal biomimic] - Environmental data collected from biomimetic and other data loggers located in rocky intertidal zones of global oceans between July 1999 and October 2013 (Environmental signal analysis: Monitoring the impacts of climate change on rocky intertidal ecosystem across a cascade of scales) | Environmental data (water temp, air temp, etc.) from biomimic devices and\nother loggers located in the rocky intertidal zone.\n\ncdm_data_type = Other\nVARIABLES:\nbiomimic (text)\ncountry (text)\nstate_province (text)\nsite_id (text)\nsite_name (text)\nlatitude (degrees_north)\nlongitude (degrees_east)\nzone (text)\nsub_zone (text)\nwave_exp (text)\nmicrosite_id (text)\norganism (unitless)\nfiledate (unitless)\ndata_description (unitless)\ndate (unitless)\ntime2 (Time, unitless)\nvalue (refer to data_description)\ntime (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_555780_fgdc.xml | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_555780_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_555780/index.htmlTable | https://www.bco-dmo.org/dataset/555780
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_555780.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_555780&showErrors=false&email= | BCO-DMO | bcodmo_dataset_555780 | |||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_1000298_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_1000298_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_1000298_v1/ | public | [ROV Biological Samples Fkt230602 and Fkt231202] - Biological samples and associated imagery collected by ROV SuBastian during the Octopus Odyssey R/V Falkor (too) expeditions Fkt230602 and Fkt231202 in Costa Rica in Jun and Dec 2023 (Octopus Odyssey) | This dataset includes metadata and imagery of deep-sea biological specimens collected during the Octopus Odyssey expeditions (Fkt230602 and Fkt231202) aboard the R/V Falkor (too) in the Pampa Submarina region off the Pacific coast of Costa Rica. Sampling was conducted from 3-20 June and 3-14 December 2023 using the ROV SuBastian across six geologic features at depths between 500 and 3180 meters. The specimens, which are archived at the Museum of Zoology at the Universidad de Costa Rica, likely contain new species and new records for the area and contribute to understanding local and regional deep-sea biodiversity. \n\nSampling was carried out under national research permits and guided by a collaborative biology team from the Universidad de Costa Rica, Universidad Nacional de Costa Rica, the Field Museum of Chicago, SpeSeas, and the Bigelow Laboratory for Ocean Sciences. The dataset follows the Darwin Core standard for documenting and reporting the occurrence data associated with each sampling event. \n\nA .zip file is provided in the supplemental documents and contains a set of subfolders, one for each sample, with in situ and laboratory images when available. The primary data file includes a relative path in the “associatedMedia” field, enabling each metadata record to be accurately linked to its corresponding imagery.\n\ncdm_data_type = Other\nVARIABLES:\neventID (unitless)\noccurrenceID (unitless)\nassociatedOccurrences (unitless)\nrecordNumber (unitless)\ninstitutionCode (unitless)\ninstitutionID (unitless)\ncollectionCode (unitless)\ncatalogNumber (unitless)\nassociatedMedia (unitless)\nbasisOfRecord (unitless)\n... (36 more variables)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_1000298_v1_fgdc.xml | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_1000298_v1_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_1000298_v1/index.htmlTable | https://osprey.bco-dmo.org/dataset/1000298
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_1000298_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_1000298_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_1000298_v1 | |||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_986587_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_986587_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_986587_v1/ | public | [Sediment Bacteria in MN Lakes] - Diversity and distribution of sediment bacteria across an ecological and trophic gradient from 2018 to 2019 (Cyanos Great Lakes project) (Collaborative Research: Cyanobacteria, Nitrogen Cycling, and Export Production in the Laurentian Great Lakes) | The microbial communities of lake sediments have the potential to serve as valuable bioindicators and integrators of watershed land use and water quality; however, the relative sensitivity of these communities to physicochemical and geographical parameters must be demonstrated at taxonomic resolutions that are feasible with current sequencing and bioinformatic approaches. The geologically diverse and lake-rich state of Minnesota (USA) is uniquely suited to address this potential because of its variability in ecological region, lake type, and watershed land use. In this study, we selected twenty lakes with varying physicochemical properties across four ecological regions of Minnesota. \n\nOur objectives were to (i) evaluate the diversity and composition of the bacterial community at the sediment–water interface and (ii) determine how lake location and watershed land use impact aqueous chemistry and influence bacterial community structure. Our 16S rRNA amplicon data from lake sediment cores at two depth intervals indicate that sediment communities are more likely to cluster by ecological region rather than by any individual lake properties (e.g., trophic status, total phosphorus concentration, lake depth). \n\nHowever, composition is tied to a given lake, wherein samples from the same core were more alike than samples collected at similar depths across lakes. Our results illustrate the diversity within lake sediment microbial communities and provide insight into relationships between taxonomy, physicochemical, and geographic properties of north temperate lakes.\n\nAll relevant data are in Sauer et al., 2022. All 16S rRNA amplicon data are available from the SRA database at BioProject PRJNA763898.\n\ncdm_data_type = Other\nVARIABLES:\naccession (unitless)\nmessage (unitless)\nsample_name (unitless)\nsample_title (unitless)\norganism (unitless)\n... (14 more variables)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_986587_v1_fgdc.xml | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_986587_v1_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_986587_v1/index.htmlTable | https://osprey.bco-dmo.org/dataset/986587
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_986587_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_986587_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_986587_v1 |