Accessing BCO-DMO data
Brought to you by BCO-DMO
|
|
BCO-DMO ERDDAP
Accessing BCO-DMO data |
log in
Brought to you by BCO-DMO |
| griddap | Subset | tabledap | Make A Graph | wms | files | Accessible | Title | Summary | FGDC | ISO 19115 | Info | Background Info | RSS | Institution | Dataset ID | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_511526 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_511526.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_511526/ | public | [growth phase exopolymers] - Experimental results: Exopolymer and carbohydrate production by diatoms with growth; conducted at the Thornton lab, TAMU from 2007-2012 (Diatom EPS Production project) (Effect of Temperature on Extracellular Polymeric Substance Production (EPS) by Diatoms) | Data from laboratory experiment on exopolymer and carbohydrate production by\nthe diatoms Thalassiosira weissflogii (CCMP 1051), Skeletonema marinoi (CCMP\n1332), and Cylindrotheca closterium (CCMP 339) during the growth to death\nphases of the cultures.\n \nRelated references: \n Chen, J. 2014. Factors affecting carbohydrate production and the formation\nof transparent exopolymer particles (TEP) by diatoms. Ph.D. dissertation,\nTexas A&M University, College Station, TX.\n\ncdm_data_type = Other\nVARIABLES:\nspecies (dimensionless)\ngrowth_phase (dimensionless)\nday (dimensionless)\nculture (dimensionless)\ncell_abundance (cells per milliliter (mL-1))\ncell_vol_mean (cubic micrometers (um^3))\nchla (Concentration Of Chlorophyll In Sea Water, micrograms per liter (ug L-1))\nchla_per_cell (Concentration Of Chlorophyll In Sea Water, picograms per cell (pg cell-1))\nchla_per_cell_vol (Concentration Of Chlorophyll In Sea Water, femtograms per cubic micrometer (fg um-3))\ntot_carb (micrograms per milliliter (ug mL-1))\ntot_carb_per_cell (picograms per cell (pg cell-1))\ntot_carb_per_cell_vol (femtograms per cubic micrometer (fg um-3))\ncolloidal_carb (micrograms per milliliter (ug mL-1))\ncollodial_per_cell (picograms per cell (pg cell-1))\ncolloidal_per_cell_vol (femtograms per cubic micrometer (fg um-3))\nEPS_carb (micrograms per milliliter (ug mL-1))\nEPS_carb_per_cell (picograms per cell (pg cell-1))\nEPS_carb_per_cell_vol (femtograms per cubic micrometer (fg um-3))\nHW_carb (micrograms per milliliter (ug mL-1))\n... (21 more variables)\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_511526/index.htmlTable | https://www.bco-dmo.org/dataset/511526
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_511526.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_511526&showErrors=false&email= | BCO-DMO | bcodmo_dataset_511526 | |||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_807316 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_807316.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_807316/ | public | [Growth rates of Line P diatoms in added Zn and Co incubation studies] - Growth rates NE Pacific and Atlantic diatom isolates under various Zn and Co additions in experiments with cultures collected from R/V Thomas G. Thompson cruise TN280, along Line P in the NE Pacific, in May of 2012. (US GEOTRACES PMT: Cobalt Biogeochemical Cycling and Connections to Metalloenzymes in the Pacific Ocean) | Growth rates of two NE Pacific Line P diatom isolates and two Atlantic diatom isolates under various Zn and Co additions. Cultures were collected from the GeoMICS expedition on the R/V Thomas G. Thompson (cruise TN280), along Line P in the NE Pacific, in May of 2012.\n\ncdm_data_type = Other\nVARIABLES:\nCulture (unitless)\nExperiment_Type (unitless)\nAdded_Zn (nanomoles per liter (nmol/L))\nAdded_Co (nanomoles per liter (nmol/L))\nTotal_Zn (nanomoles per liter (nmol/L))\nTotal_Co (nanomoles per liter (nmol/L))\nlog_Zn2plus (moles per liter (mol/L))\nlog_Co2plus (moles per liter (mol/L))\nGrowth_rate_replicate_A (per day (d-1))\nGrowth_rate_replicate_B (per day (d-1))\nGrowth_rate_average (per day (d-1))\nMaximum_RFU (Relative Fluorescence Units (RFU))\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_807316/index.htmlTable | https://www.bco-dmo.org/dataset/807316
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_807316.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_807316&showErrors=false&email= | BCO-DMO | bcodmo_dataset_807316 | |||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_807299 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_807299.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_807299/ | public | [Metal quotas of Line P diatoms in added Zn and Co incubation studies] - Metal quotas of NE Pacific and Altantic diatom isolates measured via ICP-MS after growth in zinc and cobalt media amendments in experiments with cultures collected from R/V Thomas G. Thompson cruise TN280, along Line P in the NE Pacific, in May of 2012 (US GEOTRACES PMT: Cobalt Biogeochemical Cycling and Connections to Metalloenzymes in the Pacific Ocean) | Metal quotas of two NE Pacific Line P diatom isolates and one Atlantic diatom isolate measured via ICP-MS after growth in zinc and cobalt media amendments. Experiments with cultures collected from the GeoMICS expedition on the R/V Thomas G. Thompson (cruise TN280), along Line P in the NE Pacific, in May of 2012.\n\ncdm_data_type = Other\nVARIABLES:\nCulture (unitless)\nAdded_Zn (nanomoles per liter (nmol/L))\nAdded_Co (nanomoles per liter (nmol/L))\nTotal_Zn (nanomoles per liter (nmol/L))\nTotal_Co (nanomoles per liter (nmol/L))\nlog_Zn2plus (moles per liter (mol/L))\nlog_Co2plus (moles per liter (mol/L))\nCO_to_P_avg (dimensionless)\nZN_to_P_avg (dimensionless)\nCD_to_P_avg (dimensionless)\nMN_to_P_avg (dimensionless)\nFE_to_P_avg (dimensionless)\nNI_to_P_avg (dimensionless)\nCU_to_P_avg (dimensionless)\nMO_to_P_avg (dimensionless)\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_807299/index.htmlTable | https://www.bco-dmo.org/dataset/807299
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_807299.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_807299&showErrors=false&email= | BCO-DMO | bcodmo_dataset_807299 | |||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_783500 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_783500.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_783500/ | public | [Phytoplankton Growth Acclimation] - Growth rates and equivalent spherical diameters of Heterosigma akashiwo after temperature transition (Quantifying Temperature Dependence In Growth & Grazing Rates of Planktonic Herbivores) | Quantifying phytoplankton growth as a function of environmental conditions such as temperature is critical for understanding and predicting production in the ocean. Typically, thermal response is described as the steady state growth rates under static conditions. However, here, with a clonal culture of Heterosigma akashiwo, temperature was manipulated in the laboratory with the goal of describing how growth rates may change over time through the acclimation process. Growth rates and equivalent spherical diameter of Heterosigma akashiwo after temperature transition are reported.\n\ncdm_data_type = Other\nVARIABLES:\nCulture (unitless)\ntime2 (Time, unitless)\nTemperature (degrees Celsius)\nGrowthRate (Growth Rate, per day)\nBioRate (Bio Rate, per day)\nMeanESD_t (Mean ESD T, micrometers)\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_783500/index.htmlTable | https://www.bco-dmo.org/dataset/783500
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_783500.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_783500&showErrors=false&email= | BCO-DMO | bcodmo_dataset_783500 | |||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_783509 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_783509.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_783509/ | public | [Phytoplankton size over temperature range] - Equivalent spherical diameter of Heterosigma akashiwo grown at different temperatures (Quantifying Temperature Dependence In Growth & Grazing Rates of Planktonic Herbivores) | A key component of the effects of temperature on growth and production of phytoplankton is not only through changes in numerical abundance, but also biomass and proxies for biomass such as biovolume. To understand how temperature affected size and biovolumetric growth, repeated measurements of the mean size feature, equivalent spherical diameter (ESD), were recorded for each experimental replicate culture of Heterosigma akashiwo across a broad range of temperature treatments. These data were collected as part of the experiment designed to study the effect of changing temperature on phytoplankton growth rates.\n\ncdm_data_type = Other\nVARIABLES:\nCulture (unitless)\nTemperature (degrees Celsius)\nMeanESD (Mean ESD, micrometers)\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_783509/index.htmlTable | https://www.bco-dmo.org/dataset/783509
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_783509.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_783509&showErrors=false&email= | BCO-DMO | bcodmo_dataset_783509 | |||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774784.subset | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774784 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774784.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_774784/ | public | [Picocyanobacteria Sinking Aggregates: Abundances] - Abundance of sinking aggregates of xenic and axenic marine Prochlorococcus and Synechococcus from roller tank experiments conducted in 2016 and 2017 (Aggregation of Marine Picoplankton) | Abundance of sinking aggregates of xenic and axenic marine Prochlorococcus and Synechococcus from roller tank experiments conducted in 2016 and 2017.\n\ncdm_data_type = Other\nVARIABLES:\nCulture (unitless)\nAggregate_Abundance_Control1 (number of aggregates per liter (Aggs/L))\nAggregate_Abundance_Control2 (number of aggregates per liter (Aggs/L))\nAggregate_Abundance_0_5mg_L_kaolinite1 (number of aggregates per liter (Aggs/L))\nAggregate_Abundance_0_5mg_L_kaolinite2 (number of aggregates per liter (Aggs/L))\nAggregate_Abundance_5_0mg_L_kaolinite1 (number of aggregates per liter (Aggs/L))\nAggregate_Abundance_5_0mg_L_kaolinite2 (number of aggregates per liter (Aggs/L))\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_774784/index.htmlTable | https://www.bco-dmo.org/dataset/774784
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_774784.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_774784&showErrors=false&email= | BCO-DMO | bcodmo_dataset_774784 | ||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774806.subset | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774806 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774806.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_774806/ | public | [Picocyanobacteria Sinking Aggregates: Excess Densities] - Excess density of sinking aggregates of xenic and axenic marine Prochlorococcus and Synechococcus from roller tank experiments conducted in 2016 and 2017 (Aggregation of Marine Picoplankton) | Excess density of sinking aggregates of xenic and axenic marine Prochlorococcus and Synechococcus from roller tank experiments conducted in 2016 and 2017.\n\ncdm_data_type = Other\nVARIABLES:\nCulture (unitless)\nAggregate_Excess_Density_Control1 (grams per milliliter (g/mL))\nAggregate_Excess_Density_Control2 (grams per milliliter (g/mL))\nAggregate_Excess_Density_0_5mg_Lkaolinite1 (grams per milliliter (g/mL))\nAggregate_Excess_Density_0_5mg_Lkaolinite2 (grams per milliliter (g/mL))\nAggregate_Excess_Density_5_0mg_Lkaolinite1 (grams per milliliter (g/mL))\nAggregate_Excess_Density_5_0mg_Lkaolinite2 (grams per milliliter (g/mL))\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_774806/index.htmlTable | https://www.bco-dmo.org/dataset/774806
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_774806.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_774806&showErrors=false&email= | BCO-DMO | bcodmo_dataset_774806 | ||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774792.subset | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774792 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774792.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_774792/ | public | [Picocyanobacteria Sinking Aggregates: Sinking Velocities] - Velocity of sinking aggregates of xenic and axenic marine Prochlorococcus and Synechococcus from roller tank experiments conducted in 2016 and 2017 (Aggregation of Marine Picoplankton) | Velocity of sinking aggregates of xenic and axenic marine Prochlorococcus and Synechococcus from roller tank experiments conducted in 2016 and 2017.\n\ncdm_data_type = Other\nVARIABLES:\nCulture (unitless)\nAggregate_Sinking_Velocity_Control1 (meters per day (m/d))\nAggregate_Sinking_Velocity_Control2 (meters per day (m/d))\nAggregate_Sinking_Velocity_0_5mg_Lkaolinite (meters per day (m/d))\nAggregate_Sinking_Velocity_0_5mg_Lkaolinite2 (meters per day (m/d))\nAggregate_Sinking_Velocity_5_0mg_Lkaolinite1 (meters per day (m/d))\nAggregate_Sinking_Velocity_5_0mg_Lkaolinite2 (meters per day (m/d))\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_774792/index.htmlTable | https://www.bco-dmo.org/dataset/774792
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_774792.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_774792&showErrors=false&email= | BCO-DMO | bcodmo_dataset_774792 | ||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774799.subset | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774799 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774799.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_774799/ | public | [Picocyanobacteria Sinking Aggregates: Sizes] - Size of sinking aggregates of xenic and axenic marine Prochlorococcus and Synechococcus from roller tank experiments conducted in 2016 and 2017 (Aggregation of Marine Picoplankton) | Size of sinking aggregates of xenic and axenic marine Prochlorococcus and Synechococcus from roller tank experiments conducted in 2016 and 2017.\n\ncdm_data_type = Other\nVARIABLES:\nCulture (unitless)\nAggregate_ESD_Control1 (millimeters (mm))\nAggregate_ESD_Control2 (millimeters (mm))\nAggregate_ESD_0_5mg_Lkaolinite1 (millimeters (mm))\nAggregate_ESD_0_5mg_Lkaolinite2 (millimeters (mm))\nAggregate_ESD_5_0mg_Lkaolinite1 (millimeters (mm))\nAggregate_ESD_5_0mg_Lkaolinite2 (millimeters (mm))\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_774799/index.htmlTable | https://www.bco-dmo.org/dataset/774799
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_774799.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_774799&showErrors=false&email= | BCO-DMO | bcodmo_dataset_774799 | ||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774628 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774628.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_774628/ | public | [Picocyanobacteria TEP: Cell Abundance] - Cell abundance of xenic and axenic marine Prochlorococcus and Synechococcus cultures from laboratory experiments conducted in 2016 and 2017 (Aggregation of Marine Picoplankton) | Cell abundance of xenic and axenic marine Prochlorococcus and Synechococcus cultures from laboratory experiments conducted in 2016 and 2017.\n\ncdm_data_type = Other\nVARIABLES:\nCulture (unitless)\nDays (count (days))\nCell_Abundance_rep1 (cells per mL)\nCell_Abundance_rep2 (cells per mL)\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_774628/index.htmlTable | https://www.bco-dmo.org/dataset/774628
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_774628.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_774628&showErrors=false&email= | BCO-DMO | bcodmo_dataset_774628 | |||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774634 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774634.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_774634/ | public | [Picocyanobacteria TEP: Growth Rates] - Growth rates of xenic and axenic marine Prochlorococcus and Synechococcus cultures from laboratory experiments conducted in 2016 and 2017 (Aggregation of Marine Picoplankton) | Growth rates of xenic and axenic marine Prochlorococcus and Synechococcus cultures from laboratory experiments conducted in 2016 and 2017.\n\ncdm_data_type = Other\nVARIABLES:\nCulture (unitless)\nDays_min (unitless)\nDays_max (unitless)\nGrowth_Rate_rep1 (per day)\nGrowth_Rate_rep2 (per day)\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_774634/index.htmlTable | https://www.bco-dmo.org/dataset/774634
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_774634.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_774634&showErrors=false&email= | BCO-DMO | bcodmo_dataset_774634 | |||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774639 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774639.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_774639/ | public | [Picocyanobacteria TEP: Suspended Aggregates] - Suspended aggregates of xenic and axenic marine Prochlorococcus and Synechococcus cultures from laboratory experiments conducted in 2016 and 2017 (Aggregation of Marine Picoplankton) | Suspended aggregates of xenic and axenic marine Prochlorococcus and Synechococcus cultures from laboratory experiments conducted in 2016 and 2017.\n\ncdm_data_type = Other\nVARIABLES:\nCulture (unitless)\nDays (count (days))\nSuspended_Aggregate_Volume_Concentration_rep1 (x10^6 μm^3 per mL)\nSuspended_Aggregate_Volume_Concentration_rep2 (x10^6 μm^3 per mL)\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_774639/index.htmlTable | https://www.bco-dmo.org/dataset/774639
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_774639.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_774639&showErrors=false&email= | BCO-DMO | bcodmo_dataset_774639 | |||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774646 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774646.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_774646/ | public | [Picocyanobacteria TEP: TEP Concentration] - Transparent exopolymer particle (TEP) concentrations of xenic and axenic marine Prochlorococcus and Synechococcus cultures from laboratory experiments conducted in 2016 and 2017 (Aggregation of Marine Picoplankton) | Transparent exopolymer particle (TEP) concentrations of xenic and axenic marine Prochlorococcus and Synechococcus cultures from laboratory experiments conducted in 2016 and 2017.\n\ncdm_data_type = Other\nVARIABLES:\nCulture (unitless)\nDays (count (days))\nTEP_Concentration_rep1 (ug XG per mL)\nTEP_Concentration_rep2 (ug XG per mL)\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_774646/index.htmlTable | https://www.bco-dmo.org/dataset/774646
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_774646.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_774646&showErrors=false&email= | BCO-DMO | bcodmo_dataset_774646 | |||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_750795 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_750795.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_750795/ | public | [Pmin strain feeding] - Data from an experiment that measured the occurrence of feeding among 4 Prorocentrum minimum strains on the cryptophyte Teleaulax amphoxeia (Exploring the physiological and ecological basis of mixotrophy in marine food webs) | This dataset contains data from an experiment that measured the occurrence of feeding among 4 Prorocentrum minimum strains on the cryptophyte Teleaulax amphoxeia.\n\ncdm_data_type = Other\nVARIABLES:\nCULTURE (unitless)\ntime2 (TIME, minutes)\nREP (unitless)\nPmin_COUNT (unitless)\nOFI (unitless)\nPmin_OFI_COUNT (unitless)\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_750795/index.htmlTable | https://www.bco-dmo.org/dataset/750795
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_750795.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_750795&showErrors=false&email= | BCO-DMO | bcodmo_dataset_750795 | |||||
| log in | [Thalassiosira pseudonana CCMP1335 endometabolite uptake by Ruegeria pomeroyi DSS-3] - Thalassiosira pseudonana CCMP1335 endometabolite uptake by Ruegeria pomeroyi DSS-3 (Effects of Climate Change Variables on Microbial Autotroph-Heterotroph Carbon Flux) | The ocean's temperature increase has fundamental implications for physiological rates and processes of marine microbes. In this study, a marine diatom Thalassiosira pseudonana CCMP1335 was acclimated for three months at temperatures below (14°C), equal to (20°C), and above (28°C). Heterotrophic bacterium Ruegeria pomeroyi DSS-3 was inoculated into cultures, and transporter expression was compared between temperatures. R. pomeroyi transporter expression leveraged as a biosensor of available diatom exometabolites indicated temperature-related substitution of diatom osmolytes dimethylsulfoniopropionate (DMSP), dihydroxypropanesulfonate (DHPS), and homarine (dominating carbon transfer at lower temperatures) with glycine betaine and choline (dominating at higher temperatures). T. pseudonana endometabolome pools and biosynthetic pathway expression indicated increased availability of amino acids and glycerol-3-phosphate at higher temperatures. Overall trends across datasets supported a greater importance of organic sulfur compounds in diatom-bacterial metabolite transfer at lower temperatures and greater importance of organic nitrogen compounds at higher temperatures.\n\ncdm_data_type = Other\nVARIABLES:\nExperiment (unitless)\nSample_ID (unitless)\nMetabolomics_Workbench_Project_ID (unitless)\nMetabolomics_Workbench_Study_ID (unitless)\nMetabolomics_Workbench_Sample_ID (unitless)\nNumber (unitless)\nTemperature (degrees Celsius (°C))\nReplicate (unitless)\nCulture (unitless)\nJGI_Sample_ID (unitless)\nTime_Point_h (hours (h))\nBacteria_presence (unitless)\nGlycine_Betaine (NMR peak intensity per biovolume)\nProline (NMR peak intensity per biovolume)\nDHPS (NMR peak intensity per biovolume)\n... (13 more variables)\n | BCO-DMO | bcodmo_dataset_928203_v1 | ||||||||||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_506135.subset | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_506135 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_506135.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_506135/ | public | [Thalassiosira wessiflogii growth rate and TEP] - Results from growth rate experiment with the diatom Thalassiosira wessiflogii in semi-continuous culture; conducted at the Thornton lab, TAMU from 2007-2012 (Diatom EPS Production project) (Effect of Temperature on Extracellular Polymeric Substance Production (EPS) by Diatoms) | Data from laboratory experiment on growth rate and transparent exopolymer particles (TEP) in the diatom Thalassiosira wessiflogii (CCMP 1051) in a semi-continuous culture (four replicate cultures).\n\ncdm_data_type = Other\nVARIABLES:\nday (dimensionless)\ndilution_rate (per day (day-1))\nculture (dimensionless)\ncell_abundance (cells per milliliter)\ncell_vol_mean (cubic micrometers (um^3))\ncell_vol_sd (cubic micrometers (um^3))\ncell_vol_n (dimensionless)\nchla (Concentration Of Chlorophyll In Sea Water, micrograms per liter (ug L-1))\nchla_per_cell (Concentration Of Chlorophyll In Sea Water, picograms per cell (pg cell-1))\nchla_per_cell_vol (Concentration Of Chlorophyll In Sea Water, femtograms per cubic micrometer (fg um-3))\ntot_carb (micrograms per milliliter (ug mL-1))\ntot_carb_per_cell (picograms per cell (pg cell-1))\ntot_carb_per_cell_vol (femtograms per cubic micrometer (fg um-3))\nTEP (TEP per milliliter (TEP mL-1))\nTEP_mean_size (square micrometers (um^2))\nTEP_sd (square micrometers (um^2))\nTEP_n (dimensionless)\ntot_TEP_area (square millimeters per milliliter (mm^2 mL-1))\nTEP_prod_rate (square millimeters per milliliter per day (mm^2 mL-1 day-1))\nvol_conc (microliters per liter (uL L-1))\nvol_conc_sd (microliters per liter (uL L-1))\nvol_conc_n (dimensionless)\nagg_vol_conc (microliters per liter (uL L-1))\nagg_vol_conc_sd (microliters per liter (uL L-1))\nagg_vol_conc_n (dimensionless)\n... (5 more variables)\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_506135/index.htmlTable | https://www.bco-dmo.org/dataset/506135
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_506135.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_506135&showErrors=false&email= | BCO-DMO | bcodmo_dataset_506135 |