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https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_936073_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_936073_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_936073_v1/ public [Alkalinity and dissolved inorganic carbon (DIC) from water samples collected at coral reefs in the equatorial central Pacific in 1973, 2012, 2015, and 2018] - Alkalinity and dissolved inorganic carbon (DIC) from sea water samples collected at coral reefs from equatorial central Pacific in 1973, 2012, 2015, and 2018 (The Biophysics of Coral Reef Resilience:  hydrodynamic and ecological drivers of coral survival under extreme heat) This dataset includes total alkalinity (TA) and dissolved inorganic carbon (DIC), along with water temperature and salinity, to characterize the carbonate chemistry in the vicinity of 5 coral reef islands in the equatorial central Pacific. Discrete water samples were collected from June  7 – 18, 2012 and from September 5 – 26, 2015 at Kanton (2.8°S, 171.7°W), Enderbury (3.1°S, 171.1°W), Rawaki (3.7°S, 170.7°W) and Nikumaroro (4.7°S, 174.5°W), and from May 5 – 23, 2018 at Kanton, Rawaki, Nikumaroro, and Orona (4.5°S, 172.2°W) and at several open ocean sites. Some of the 2012 and 2015 water samples were also analyzed for nitrate, ammonium, phosphate and silicate concentrations.\nAlso included in this dataset are TA, pH, DIC, salinity, and water temperature from samples collected from November 27 to December 4, 1973 at Kanton Island by Smith, S. V., and P. L. Jokiel (1978).\n\ncdm_data_type = Other\nVARIABLES:\ntime (Datetime_utc, seconds since 1970-01-01T00:00:00Z)\nDatetime_local (unitless)\nlatitude (Lat_n, degrees_north)\nlongitude (Lon_e, degrees_east)\nSite_description (unitless)\ndepth (m)\nTemperature (degrees Celsius)\nSalinity (practical salinity unit, psu)\nTA (micromoles/kilogram)\nDIC (micromoles/kilogram)\nNitrate (micromoles/liter)\nAmmonium (micromoles/liter)\nAmmonium_flag (dimensionless)\nPhosphate (micromoles/liter)\nSilicate (micromoles/liter)\npH (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_936073_v1_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_936073_v1_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_936073_v1/index.htmlTable https://www.bco-dmo.org/dataset/936073 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_936073_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_936073_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_936073_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_942884_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_942884_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_942884_v1/ public [Biogeochemical Measurements from Surface Waters at the North Shore of Mo'orea, French Polynesia] - Biogeochemical and microbial parameters collected during spatial surveys on a coral reef at Mo'orea's North Shore (French Polynesia) in September 2017, May 2019, and April 2022 (Collaborative Research: Characterizing microbial transformation of marine DOM at the molecular level using untargeted metabolomic) This data includes biogeochemical and microbial parameters collected during spatial surveys on a coral reef at Mo'orea's North Shore (French Polynesia). Sampling took place in September 2017, May 2019, and April 2022. In 2019 and 2022, samples were also collected across three midday Lagrangian transect deployments, following water flowing linearly from ocean-facing forereefs over a reef crest to backreef lagoons. A variety of methods were used including colorimetric detection of inorganic nutrients, high-temperature combustion/oxidation, or chemical oxidation for the analysis of dissolved organic carbon (DOC) and particulate organic carbon and nitrogen (POC and PON) concentrations, isotope ratio mass spectrometry for determining stable carbon and nitrogen isotopes of particulate organic matter (POM), scanning excitation-emissions fluorescence measurements of whole seawater to quantify fluorescent dissolved organic matter (fDOM), flow cytometry-based cell counts to quantify bacterial abundance, and liquid chromatography coupled to tandem mass spectrometry to identify individual chemical features within marine DOM. These data help to quantify how biogeochemical parameters change in this region of the reef as open ocean waters flow onto the reef, over the reef, and then mix with waters in the bay. This work helps us to better identify external nutrients to the reef and how reef organisms modify and cycle carbon, nitrogen, and phosphorus over the reef. The results may be of use to physical, chemical, and biological oceanographers who study tropical reef systems and could inform other studies in the region including those conducted as part of the Mo'orea Coral Reef (MCR) Long Term Ecology Research (LTER) program. The samples were collected, measured (for a subset as noted below), and analyzed primarily by members of Lihini Aluwihare's group.\n\ncdm_data_type = Other\nVARIABLES:\nSample_ID (unitless)\nSampling_Strategy (unitless)\nMassiveID (unitless)\nMS_Sample_ID_1 (unitless)\nMS_Sample_ID_2 (unitless)\nYear (unitless)\nlongitude (degrees_east)\nlatitude (degrees_north)\n... (41 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_942884_v1_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_942884_v1_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_942884_v1/index.htmlTable https://www.bco-dmo.org/dataset/942884 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_942884_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_942884_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_942884_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_904195_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_904195_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_904195_v1/ public [Cerro Mundo Temperature 2] - Environmental temperature data collected at Cerro Mundo Bay, San Cristobal, Galapagos from 2022-2023 (Galapagos 2021 project) (Temperature Regulation of Top-Down Control in a Pacific Upwelling System) Increased standing macroalgal biomass in upwelling zones is generally assumed to be the result of higher nutrient flux due to upwelled waters, However, other factors can strongly impact macroalgal communities. For example, herbivory and temperature, via their effects on primary producers and the metabolic demands of consumers, can also influence macroalgal biomass and productivity, respectively.  Although there is a fair number of studies looking at the interactive effects of herbivores and nutrients in both tropical and temperate regions, there is a lack of studies looking at these effects in tropical or subtropical upwelling regions. The purpose of this study was to measure the effects that herbivores, temperature, and nutrient availability have on standing macroalgal biomass. We manipulated nutrient availability and herbivory in six field experiments during contrasting productivity and thermal regimes (cool-upwelling and warm, non-upwelling season) on a subtidal nearshore rocky reef. \n\nHere, we present a set of temperature (°C) data collected at Cerro Mundo Bay, San Cristobal, Galapagos from September 2022 to February 2023. The environmental temperature was recorded every 15 minutes using a HOBO Water Temperature pro V2 Data Logger (Onset®) attached to the seafloor at a 10 meters depth mark.\n\ncdm_data_type = Other\nVARIABLES:\nDateTime_Local (unitless)\ntime (Iso_datetime_utc, seconds since 1970-01-01T00:00:00Z)\nTemp (Celcius)\nLatitude (degrees_north)\nlongitude (degrees_east)\ndepth (m)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_904195_v1/index.htmlTable https://www.bco-dmo.org/dataset/904195 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_904195_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_904195_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_904195_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_793571 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_793571.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_793571/ public [Edmunds et al. MarBio 2019a: Kd data] - Light data (Kd) from surveys conducted in St. John, US Virgin Islands in 2017 (RAPID: Hurricane Irma: Effects of repeated severe storms on shallow Caribbean reefs and their changing ecological resilience) Light data (Kd) from surveys conducted in Great Lameshur Bay, St. John, US Virgin Islands in 2017. These data were used in Edmunds et al. (2019) in Figure 2.\n\ncdm_data_type = Other\nVARIABLES:\nDateTime_Local (Date Time Local, unitless)\nSurface_Light (micromoles per square meter per second (µmol quanta/m2/s))\nUnderwater_Light (micromoles per square meter per second (µmol quanta/m2/s))\nKd (unitless)\nTransmition_Percent (percent)\ntime (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_793571/index.htmlTable https://www.bco-dmo.org/dataset/793571 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_793571.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_793571&showErrors=false&email= BCO-DMO bcodmo_dataset_793571
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3095 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3095.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3095/ public [phytoplankton taxonomy] - Time-Series of Phytoplankton Taxonomy and Density collected by the CARIACO Ocean Time-Series Project from November 1995 to January 2017 (CARIACO Ocean Time-Series Program) The CARIACO Ocean Time-Series Program (formerly known as CArbon Retention In A Colored Ocean) started on November 1995 (CAR-001) and ended on January 2017 (CAR-232). Monthly cruises were conducted to the CARIACO station (10.50\\u00b0 N, 64.67\\u00b0 W) onboard the R/V Hermano Gin\\u00e9s of the Fundaci\\u00f3n La Salle de Ciencias Naturales de Venezuela. The program studied the relationship between surface primary production, physical forcing variables like the wind, and the settling flux of particulate carbon in the Cariaco Basin. This depression, located on the continental shelf of Venezuela, shows marked seasonal and interannual variation in hydrographic properties and primary production (carbon fixation rates by photosynthesis of planktonic algae).\\r\\n\\r\\nOne of the monthly measurements taken by the program was water sampling at different depths for phytoplankton taxonomy (occurrence and density). Those water samples were collected with Niskin bottles during the first CTD Cast of the morning at 1, 7, 25, 35, 75, and 100 m depth. Phytoplankton taxonomy and density was determined at each depth at the level of species or genera. Values of zero are real and denote that a specific species was not found at that cruise/depth.\n\ncdm_data_type = Other\nVARIABLES:\nCruise (unitless)\nCruise_ID_2 (unitless)\nLeg (unitless)\nCast (unitless)\nDay_local (unitless)\nMonth_local (unitless)\nYear_local (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nTime_start_local (unitless)\nTime_end_local (unitless)\nDatetime_local (unitless)\ntime (Datetime UTC, seconds since 1970-01-01T00:00:00Z)\nSpeciesNameOriginal (Species Name Original, unitless)\nSpeciesNameCleaned (Species Name Cleaned, unitless)\n... (11 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_3095_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3095/index.htmlTable https://www.bco-dmo.org/dataset/3095 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3095.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3095&showErrors=false&email= BCO-DMO bcodmo_dataset_3095
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_925664_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_925664_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_925664_v1/ public [Shell dissolution data for Mytilus californianus] - Shell dissolution data for Mytilus californianus from March to July 2020 (OA decoupling project) (Invertebrate calcification and behavior in seawater of decoupled carbonate chemistry) This dataset supports the main incubation data. These data document shell dissolution rates for Mytilus californianus which were used to convert net calcification rates of mussels into gross calcification rates.\n\ncdm_data_type = Other\nVARIABLES:\nspecies (unitless)\nAphiaID (unitless)\nLSID (unitless)\nmodule (unitless)\ndatetime_local (unitless)\nstart_time_local (unitless)\nISO_Start_DateTime_UTC (unitless)\nduration (hours)\nsalinity (PSU)\ntemperature (degrees Celcius)\nshell_mass (grams (g))\nTA (umol kg-1)\nph (unitless)\nhco3 (umol kg-1)\nco3 (umol kg-1)\nomega (unitless)\nco2 (umol kg-1)\npco2 (uatm)\ndic (umol kg-1)\nincubation_water_mass (kilograms (kg))\ndelta_ta (umol kg-1)\ndiss_rate (umol hr-1 g-1)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_925664_v1/index.htmlTable https://www.bco-dmo.org/dataset/925664 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_925664_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_925664_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_925664_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_926905_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_926905_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_926905_v1/ public [Short-term heat stress assay Heron Island - experimental temperature data] - Temperature data from short-term heat stress assays performed with with corals collected from sites around Heron Island, southern Great Barrier Reef  in Sept and Oct of 2022 (Influence of environmental pH variability and thermal sensitivity on the resilience of reef-building corals to acidification stress) Variable temperature regimes that expose corals to sub-lethal heat stress have been recognized as a mechanism to increase coral thermal tolerance and lessen coral bleaching. However, there is a need to better understand which thermal regimes maximize coral stress hardening. Here, standardized thermal stress assays were used to determine the relative thermal tolerance of three divergent genera of corals (Acropora, Pocillopora, Porites) originating from six reef sites representing an increasing gradient of annual mean diel temperature fluctuations of 1–3°C day-1. Bleaching severity and dark-acclimated photochemical yield (i.e., Fv/Fm) were quantified following exposure to five temperature treatments ranging from 23.0 to 36.3°C (see Related Datasets for photochemical yield). This data set contains the short-term heat stress temperature data.\n\ncdm_data_type = Other\nVARIABLES:\nindex (unitless)\nDate (unitless)\ntime_local (Time, unitless)\nDateTime_Local (unitless)\nTemperature (degrees Celsius (degC))\nday (unitless)\nSite (unitless)\nTreatment (unitless)\ntime (Datetime_utc, seconds since 1970-01-01T00:00:00Z)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_926905_v1/index.htmlTable https://www.bco-dmo.org/dataset/926905 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_926905_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_926905_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_926905_v1

 
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