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log in [Chemotaxis of P. haloplanktis towards exudates of Synechoccocus] - Chemotaxis of P. haloplanktis towards exudates of phage-infected and control Synechoccocus (VIC project) (Collaborative Research: Viral induced chemotaxis mediating cross-trophic microbial interactions and carbon flux) This data set summarises the chemotactic response of a model marine bacteria (Pseudoalteromonas haloplanktis  ATCC 700530) to filtered exudates of the cyanobacteria Synechococcus sp WH8102. Two filtrate sets were collected, each spanning 6 time points (named T1 -> T6), with the initial assays split into 4 biological replicates (named A,B,C,D). \n\nThe two treatments were:\n\n1) A control treatment (named \"Control\", or shortened to \"C\")\n\n2) A phage-infected treatment (named \"Phage\", or shortened to \"P\"), where host Synechococcus were infected with the T-4 like Myovirus S-SSM5, with data collected over the pre-lysis cycle.\n\nThese treatments are fully described in: https://doi.org/10.1038/s43705-022-00169-6.\n\n\nAt both time points, statistically significant preference was measured towards the phage-infected exudates by analyzing the cell distribution across a microfluidic channel.\n\ncdm_data_type = Other\nVARIABLES:\nExperiment_ID (unitless)\nExperiment_type (unitless)\nBioreplicate_ID (unitless)\nTime_point_ID (unitless)\nTreatment (unitless)\nTime_t (minutes)\nbeta_Repeat_1 (unitless)\nbeta_Repeat_2 (unitless)\nbeta_Repeat_3 (unitless)\nAverage (unitless)\nStandard_Error (unitless)\n BCO-DMO bcodmo_dataset_913620_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_723277 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_723277.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_723277/ public [Dinoflagellate culturing] - Size and chemical responses of two dinoflagellate species used in natural high light exposure experiments (Protist Signaling project) (Environmental stress and signaling based on reactive oxygen species among planktonic protists) Size and chemical responses of two dinoflagellate species used in natural high light exposure experiments (Protist Signaling project)\n\ncdm_data_type = Other\nVARIABLES:\nExperiment_ID (unitless)\ntime (Experiment Date, seconds since 1970-01-01T00:00:00Z)\nDinoflagellate_species (unitless)\nTotal_PAR_during_exposure_treatment (mol photons m^-2)\nSampling_timepoint (unitless)\nReplicate_cell_counts (cells ml-1)\nReplicate_cell_volume (um^3)\nReplicate_determinations_chlorophyll_a (Concentration Of Chlorophyll In Sea Water, pg cell-1)\nReplicate_determinations_chlorophyll_a_per_unit_cell_volume (Concentration Of Chlorophyll In Sea Water, mg L-1)\nReplicate_determinations_particulate_DMSP_fmolcell1 (fmol cell-1)\nReplicate_determinations_particulate_DMSP_mmolL_cellvol1 (Replicate Determinations Particulate DMSP Mmol L Cellvol1, mmol L cell vol-1)\nReplicate_determinations_dissolved_DMSP_nmolL1 (Replicate Determinations Dissolved DMSP Nmol L1, nmol L-1)\nReplicate_determinations_dissolved_DMSP_fmolcell1 (fmol cell-1)\nReplicate_determinations_total_DMSP (umol L-1)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_723277/index.htmlTable https://www.bco-dmo.org/dataset/723277 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_723277.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_723277&showErrors=false&email= BCO-DMO bcodmo_dataset_723277
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_723266 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_723266.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_723266/ public [Irradiance exposure experiments] - Photophysiological responses of two dinoflagellate species used in natural high light exposure experiments (Protist Signaling project) (Environmental stress and signaling based on reactive oxygen species among planktonic protists) Photophysiological responses of two dinoflagellate species used in natural high light exposure experiments (Protist Signaling project)\n\ncdm_data_type = Other\nVARIABLES:\nExperiment_ID (unitless)\nExperiment_Date (unitless)\nDinoflagellate_species (unitless)\nMax_PAR (umol photons m^-2 s^-1)\nTotal_PAR (mol photons m^-2)\nSampling_Time (unitless)\nTreatment (unitless)\nSample_Number (unitless)\nFvFm (FV FM, unitless)\ntime (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_723266/index.htmlTable https://www.bco-dmo.org/dataset/723266 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_723266.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_723266&showErrors=false&email= BCO-DMO bcodmo_dataset_723266
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_779033 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_779033.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_779033/ public [Light stress grazing: photosynthetic efficiency] - Photosynthetic efficiency data from light stress in phytoplankton and dinoflagellate grazing response experiments from July of 2015 to September of 2018 (Environmental stress and signaling based on reactive oxygen species among planktonic protists) Fv/Fm (photosynthetic efficiency) data from light stress in phytoplankton and dinoflagellate grazing response experiments from July of 2015 to September of 2018. These data were published in Strom et al. (2020).\n\ncdm_data_type = Other\nVARIABLES:\nExperiment_ID (unitless)\nExperiment_Date (unitless)\nPhytoplankton_Species (unitless)\nBottle_Type (unitless)\nNum_Screens (unitless)\nTotal_PAR (mol photons m-2)\nTime_interval (unitless)\nSampling_Time (count)\nReplicate_Number (unitless)\nFvFm (FV FM, dimensionless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_779033/index.htmlTable https://www.bco-dmo.org/dataset/779033 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_779033.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_779033&showErrors=false&email= BCO-DMO bcodmo_dataset_779033
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_779050 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_779050.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_779050/ public [Light stress grazing: prey and predator exposure] - Prey and predator exposure results from light stress in phytoplankton and dinoflagellate grazing response experiments from August to September of 2018 (Environmental stress and signaling based on reactive oxygen species among planktonic protists) Matrix data from light stress in phytoplankton and dinoflagellate grazing response experiments from August of 2016 to September of 2018.  Both predators and prey were exposed to experimental irradiances and then tested in an array of combinations. These data were published in Strom et al. (2020).\n\ncdm_data_type = Other\nVARIABLES:\nExperiment_ID (unitless)\nExperiment_Date (unitless)\nPhytoplankton_Species (unitless)\nMicrograzer_Species (unitless)\nPhytoplankton_Bottle_Type (unitless)\nNum_Phytoplankton_Screens (unitless)\nPhytoplankton_PAR_dose (mol photons m-2)\nMicrograzer_Bottle_Type (unitless)\nNum_Micrograzer_Screens (unitless)\nMicrograzer_PAR_Dose (mol photons m-2)\nCombined_PAR_dose (mol photons m-2)\nReplicate_Number (unitless)\nFraction_Feeding (dimensionless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_779050/index.htmlTable https://www.bco-dmo.org/dataset/779050 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_779050.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_779050&showErrors=false&email= BCO-DMO bcodmo_dataset_779050
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_779043.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_779043 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_779043.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_779043/ public [Light stress grazing: prey-only exposure] - Prey-only exposure results from light stress in phytoplankton and dinoflagellate grazing response experiments from July of 2015 to July of 2017 (Environmental stress and signaling based on reactive oxygen species among planktonic protists) Prey-only exposure results (single-factor) results from light stress in phytoplankton and dinoflagellate grazing response experiments from July of 2015 to July of 2017. These data were published in Strom et al. (2020).\n\ncdm_data_type = Other\nVARIABLES:\nExperiment_ID (unitless)\nExperiment_Date (unitless)\nPhytoplankton_Species (unitless)\nMicrograzer_Species (unitless)\nBottle_Type (unitless)\nNum_Screens (unitless)\nPhytoplankton_PAR_Dose (mol photons m-2)\nReplicate_Number (unitless)\nFraction_Feeding (dimensionless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_779043/index.htmlTable https://www.bco-dmo.org/dataset/779043 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_779043.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_779043&showErrors=false&email= BCO-DMO bcodmo_dataset_779043
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_766334 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_766334.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_766334/ public [Nitrogen and carbon fixation rates - bulk seawater] - Nitrogen and carbon fixation rates from bulk water samples from RV/Atlantic cruise AT39-05, Feb-Mar 2018 (Collaborative Research:  Iron and phosphorus balanced limitation of nitrogen fixation in the oligotrophic ocean) Nitrogen and carbon fixation rates from bulk water samples from RV/Atlantic cruise AT39-05, Feb-Mar 2018.\n\ncdm_data_type = Other\nVARIABLES:\nStation (unitless)\nExperiment_ID (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nSample_D (unitless)\nTreatment (unitless)\nN2_fix (micromol/liter/hour (umol/l/h))\nC_fix (micromol/liter/hour (umol/l/h))\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_766334_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_766334/index.htmlTable https://www.bco-dmo.org/dataset/766334 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_766334.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_766334&showErrors=false&email= BCO-DMO bcodmo_dataset_766334
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_766354 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_766354.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_766354/ public [Nitrogen and carbon fixation rates - Trichodesmium] - Nitrogen and carbon fixation rates from Trichodesmium colonies from RV/Atlantic cruise AT39-05, Feb-Mar 2018 (Collaborative Research:  Iron and phosphorus balanced limitation of nitrogen fixation in the oligotrophic ocean) Nitrogen and carbon fixation rates from Trichodesmium colonies from RV/Atlantic cruise AT39-05, Feb-Mar 2018.\n\ncdm_data_type = Other\nVARIABLES:\nStation (unitless)\nExperiment_ID (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nSample_D (unitless)\nTreatment (unitless)\nN2_fix (micromol/liter/hour (umol/l/h))\nC_fix (micromol/liter/hour (umol/l/h))\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_766354_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_766354/index.htmlTable https://www.bco-dmo.org/dataset/766354 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_766354.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_766354&showErrors=false&email= BCO-DMO bcodmo_dataset_766354
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_766374 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_766374.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_766374/ public [POC and PON - bulk seawater] - POC and PON from bulk seawater samples from RV/Atlantic cruise AT39-05, Feb-Mar 2018 (Collaborative Research:  Iron and phosphorus balanced limitation of nitrogen fixation in the oligotrophic ocean) POC and PON from bulk seawater samples from RV/Atlantic cruise AT39-05, Feb-Mar 2018.\n\ncdm_data_type = Other\nVARIABLES:\nStation (unitless)\nExperiment_ID (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nSample_D (unitless)\nTreatment (unitless)\nPOC (Particulate Organic Carbon, micromol/liter (umol/L))\nPON (micromol/liter (umol/L))\nPOC_PON (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_766374_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_766374/index.htmlTable https://www.bco-dmo.org/dataset/766374 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_766374.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_766374&showErrors=false&email= BCO-DMO bcodmo_dataset_766374
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_766394 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_766394.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_766394/ public [POC and PON - Trichodesmium] - POC and PON from Trichodesmium colonies from RV/Atlantic cruise AT39-05, Feb-Mar 2018 (Collaborative Research:  Iron and phosphorus balanced limitation of nitrogen fixation in the oligotrophic ocean) POC and PON from Trichodesmium colonies from RV/Atlantic cruise AT39-05, Feb-Mar 2018.\n\ncdm_data_type = Other\nVARIABLES:\nStation (unitless)\nExperiment_ID (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nSample_D (unitless)\nTreatment (unitless)\nPOC (Particulate Organic Carbon, micromol/liter (umol/L))\nPON (micromol/liter (umol/L))\nPOC_PON (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_766394_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_766394/index.htmlTable https://www.bco-dmo.org/dataset/766394 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_766394.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_766394&showErrors=false&email= BCO-DMO bcodmo_dataset_766394
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_924613_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_924613_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_924613_v1/ public [Specific Dynamic Action of larval grunion - Experiments 2a and 2b] - Differences in mean oxygen consumption of fed and unfed larvae used to understand the metabolic cost of digestion, Specific Dynamic Action (SDA), under ocean acidification and warming treatments - Experiments 2a and 2b (RUI: Evaluating selection via ocean acidification and evolutionary responses of two coastal fishes) These data include the differences in mean oxygen consumption of fed and unfed larvae used to understand the metabolic cost of digestion, Specific Dynamic Action (SDA), under ocean acidification and warming treatments. Data was collected in the summers of 2021 and 2022 using a microplate reader system that uses optical fluorescence to measure dissolved oxygen concentrations in water. Knowing the energetic cost of digestion under future climate change is important as studies, particularly on larval fish, begin to investigate how energy budgets will change. These data help us to understand an important part of daily metabolic costs and how that cost might change under ocean acidification and warming. Data were collected by Emma Siegfried and Dr. Darren Johnson at California State University, Long Beach. These data are from experiments 2a and 2b. Experiment 2a contains delta VO2 values to describe the SDA curve for a single feeding under 4 experimental treatments (low temperature & low CO2; low temperature & high CO2; high temperature & low CO2; high temperature & high CO2). In experiment 2a, food ration was increased at high temperatures. Experiment 2b contains delta VO2 values to describe the SDA curve for a single feeding under the same 4 experimental treatments, except that food ration was held constant across all temperature and CO2 treatments.\n\ncdm_data_type = Other\nVARIABLES:\nexperiment_ID (unitless)\nDPH (days)\ndeltaVO2 (milligrams O2 per liter per hour)\ndeltaVO2_SE (milligrams O2 per liter per hour)\ntemperature (degrees Celsius)\nOA_treat (unitless)\npCO2 (microatmospheres)\ntime_elapsed (hours)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_924613_v1/index.htmlTable https://www.bco-dmo.org/dataset/924613 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_924613_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_924613_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_924613_v1

 
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