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https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_773146 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_773146.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_773146/ public CARIACO time series individual CTD profiles from B/O Hermano Gines HG93_CARIACO in the CARIACO basin from 1995-2017 (CARIACO project) This collection of data comprises all the Individual CTD profiles from the Cariaco basin taken as part of the CARIACO Ocean Time-Series Program from November 1995 to January 2017.  These include all the CTD profiles taken during the monthly hydrographic cruises at the CARIACO station (10.50\\u00b0 N, 64.67\\u00b0 W), as well as other CTD profiles from extra legs of the monthly cruises, and few spatial cruises collected in and around the Cariaco basin. CTD\\u2019s Salinity and Oxygen where calibrated with in-situ measurements (see Acquisition Description). This dataset is complimentary to the monthly \\u201cCTD Composite Profiles\\u201d (https://www.bco-dmo.org/dataset/3092), and many fields are very similar to that data-base. The difference with that dataset, is that here we present all the CTD casts for each cruise, the CTD profiles are single (not composite), and the salinity and oxygen profiles were calibrated with in-situ measurements, but fluorescence was no calibrated.\n\ncdm_data_type = Other\nVARIABLES:\nCruise_no (unitless)\nCruiseID (Cruise ID, unitless)\nLeg (unitless)\nStationID (Station ID, unitless)\nCast (unitless)\nCastName (Cast Name, unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nLATITUDE (decimal_degrees)\nLONGITUDE (decimal_degrees)\nyear_localT (Year Local T, unitless)\nmonth_localT (Month Local T, unitless)\nday_localT (Day Local T, unitless)\nhour_localT (Hour Local T, unitless)\nmin_localT (Min Local T, unitless)\nDate_Time_Local (unitless)\ntime (Date Time GMT, seconds since 1970-01-01T00:00:00Z)\n... (45 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_773146_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_773146/index.htmlTable https://www.bco-dmo.org/dataset/773146 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_773146.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_773146&showErrors=false&email= BCO-DMO bcodmo_dataset_773146
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3918 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3918.graph public CTD Profiles CTD Profiles. Profiles of basic CTD measurements of (Pressure, Depth, Temperature, Conductivity, and Salinity)  are reported along with dissolved oxygen, beam attenuation, and relative fluorescence, at one-decibar averages.  The profiles were collected during monthly hydrographic cruises to the BATS site at 31° 40' N 64° 10'W and during biweekly cruises to a neighbouring location (32°10′N 64°30′W), known as Hydrostation \"S.\"\n\ncdm_data_type = Point\nVARIABLES:\ncruise_type (unitless)\ncruise_type_text (unitless)\ncast_ID (unitless)\ncruise_number (unitless)\ncast_number (unitless)\ndecimal_year (years)\ntime (ISO Datetime Deployed, seconds since 1970-01-01T00:00:00Z)\nDecimal_date_deployed (unitless)\nDecimal_day_deployed (unitless)\nISO_datetime_recovered (seconds since 1970-01-01T00:00:00Z)\nDecimal_date_recovered (unitless)\nLongitude_CTD_deployed (Longitude, degrees_east)\nLatitude_CTD_deployed (Latitude, degrees_north)\nLongitude_CTD_recovered (Longitude, degrees_east)\nLatitude_CTD_recovered (Latitude, degrees_north)\nfilename (unitless)\ninfo_filename (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nPressure (decibar)\ndepth (m)\nBeam_Attenuation_Coefficient (per meter)\nConductivity (Sea Water Electrical Conductivity, Siemens per meter)\n... (5 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_3918_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3918/index.htmlTable https://www.bco-dmo.org/dataset/3918 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3918.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3918&showErrors=false&email= BCO-DMO bcodmo_dataset_3918
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_785167.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_785167 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_785167/ public Eastern oyster gonad methylation patterns in response to experimental ocean acidification Eastern oyster gonad methylation patterns in response to experimental ocean acidification at pCO2 levels 400 and 2800 ppm. Oysters were collected from an intertidal oyster reef in Plum Island Sound, MA, Gulf of Maine in mid-July 2016. This dataset includes GenBank BioProject PRJNA513384 metadata.\n\ncdm_data_type = Other\nVARIABLES:\nbioproject_accession (unitless)\nbiosample_accession (unitless)\nlibrary_ID (unitless)\ntitle (unitless)\nlibrary_strategy (unitless)\nlibrary_source (unitless)\nlibrary_selection (unitless)\nlibrary_layout (unitless)\nplatform (unitless)\ninstrument_model (unitless)\ndesign_description (unitless)\nfiletype (unitless)\nfilename (unitless)\nfilename2 (unitless)\nMBD_cv_id (unitless)\npCO2_treatment (P CO2 Treatment, ppm)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_785167_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_785167/index.htmlTable https://www.bco-dmo.org/dataset/785167 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_785167.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_785167&showErrors=false&email= BCO-DMO bcodmo_dataset_785167
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_757784.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_757784 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_757784.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_757784/ public Hydrographic data collected during casts with a CTD-rosette system on R/V Endeavor cruise EN614 from May to June 2018 Hydrographic data collected during casts with a CTD-rosette system on R/V Endeavor cruise EN614 from May to June 2018.\n\ncdm_data_type = Other\nVARIABLES:\nCruise (unitless)\nStation (unitless)\nSite (unitless)\nStn_Event (unitless)\nFilename (unitless)\nScan (Unitless)\nTimeJ (Time J, unitless)\nTimeS (Time S, seconds)\ntime (Date ODV, seconds since 1970-01-01T00:00:00Z)\nPrDM (PR DM, decibars (db))\ndepth (Dep SM, m)\nT090C (T090 C, degrees Celsius)\nT190C (T190 C, degrees Celsius)\nT2_T190C (T2 T190 C, degrees Celsius)\nC0S_m (C0 S M, Siemens per meter (S/m))\nC1S_m (C1 S M, Siemens per meter (S/m))\nC2_C1S_m (C2 C1 S M, Siemens per meter (S/m))\nV0 (volts)\nCStarAt0 (CStar At0, reciprocal meters (1/m))\nCStarTr0 (CStar Tr0, unitless (percent))\nV1 (volts)\nFlECO_AFL (Fl ECO AFL, milligrams per cubic meter (mg/m^3))\nV2 (volts)\nAltM (Alt M, meters (m))\nV3 (volts)\nPar (Downwelling Photosynthetic Photon Radiance In Sea Water, micromoles photons per square meter per second (umol photons/m^2/sec))\n... (25 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_757784_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_757784/index.htmlTable https://www.bco-dmo.org/dataset/757784 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_757784.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_757784&showErrors=false&email= BCO-DMO bcodmo_dataset_757784
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_745518.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_745518 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_745518/ public Microbial eukaryotic focused metatranscriptome data from seawater collected in coastal California in May of 2015 Seawater was collected via Niskin bottles mounted with a CTD from the San Pedro Ocean Time-series (SPOT) station off the coast of Southern California near the surface (5 m), 150 and 890 m, in late May 2015. Raw sequence data was generated as part of a metatranscriptome study targeting the protistan community.  Raw sequences are available at the National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA) database (SRA Study ID: SRP110974, BioProject: PRJNA391503).  Sequences for BioProject PRJNA608423 will be available at NCBI on Jan 1st, 2021.\\r\\n\\r\\nThese data were published in Hu et al. (2018).\n\ncdm_data_type = Other\nVARIABLES:\nSRA_run (unitless)\nSRA_run_link (unitless)\nSRA_study (unitless)\nbioproject_accession (unitless)\nbiosample_accession (unitless)\nlibrary_ID (unitless)\ntitle (unitless)\nsample_name (unitless)\nlibrary_strategy (unitless)\nlibrary_source (unitless)\nlibrary_selection (unitless)\nlibrary_layout (unitless)\nplatform (unitless)\ninstrument_model (unitless)\ndesign_description (unitless)\nfiletype (unitless)\nfilename (unitless)\nfilename2 (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_745518_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_745518/index.htmlTable https://www.bco-dmo.org/dataset/745518 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_745518.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_745518&showErrors=false&email= BCO-DMO bcodmo_dataset_745518
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_745527.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_745527 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_745527.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_745527/ public NCBI accession metadata for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 Raw DNA and RNA V4 tag sequences include spatially and temporally distinct samples from coastal California.  Samples were collected in Niskin bottles with a CTD rosette at the San Pedro Ocean Time-series (SPOT) between April of 2013 and January of 2014.  This dataset contains sequence data accession numbers and metadata for the National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA) database (SRA Study ID: SRP070577, BioProject: PRJNA311248).\n\ncdm_data_type = Other\nVARIABLES:\nbioproject_accession (unitless)\nsample_name (unitless)\nSRA_run_ID (unitless)\nSRA_run_link (unitless)\nlibrary_ID (unitless)\nSRA_study_ID (unitless)\nSRA_title (unitless)\nlibrary_strategy (unitless)\nlibrary_source (unitless)\nlibrary_selection (unitless)\nlibrary_layout (unitless)\nplatform (unitless)\ninstrument_model (unitless)\ndesign_description (unitless)\nfiletype (unitless)\nfilename (unitless)\nfiletpe2 (unitless)\nfilename2 (unitless)\ndepth2 (Depth, various)\nlatitude (degrees_north)\nlongitude (degrees_east)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_745527_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_745527/index.htmlTable https://www.bco-dmo.org/dataset/745527 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_745527.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_745527&showErrors=false&email= BCO-DMO bcodmo_dataset_745527
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3782.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3782 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3782.graph public Niskin bottle samples Niskin bottle samples. CTD measurements at water sample depths and Niskin bottle water samples from the Bermuda Atlantic Time-series Study (BATS) and from Station S, located 25 km SE of Bermuda (32°10N, 64°30W) Measurements have been collected since 1988 and include nutrients, biogeochemical concentration, bacterial enumeration, and cyanobacteria..\n\ncdm_data_type = Point\nVARIABLES:\ncruise_type (unitless)\ncruise_type_text (unitless)\ncruise_number (unitless)\ncast_number (unitless)\ndecy (year)\ntime (ISO Datetime, seconds since 1970-01-01T00:00:00Z)\nlatitude (degrees_north)\nlongitude (degrees_east)\nfilename (unitless)\nId (unitless)\ndepth (m)\nniskin_number (unitless)\np1 (nanograms per kilogram)\np2 (nanograms per kilogram)\np3 (nanograms per kilogram)\np4 (nanograms per kilogram)\np5 (nanograms per kilogram)\np6 (nanograms per kilogram)\np7 (nanograms per kilogram)\np8 (nanograms per kilogram)\np9 (nanograms per kilogram)\np10 (nanograms per kilogram)\np11 (nanograms per kilogram)\np12 (nanograms per kilogram)\n... (41 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_3782_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3782/index.htmlTable https://www.bco-dmo.org/dataset/3782 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3782.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3782&showErrors=false&email= BCO-DMO bcodmo_dataset_3782
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_746654.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_746654 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_746654.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_746654/ public Trichodesmium AHL amendment metatranscriptomic reads accessions and metadata Trichodesmium is a marine, diazotrophic cyanobacterium that plays a central role in the biogeochemical cycling of carbon and nitrogen. Colonies ubiquitously co-occur with a diverse microbiome of heterotrophic bacteria. Here we show that manipulation of the microbiome with quorum sensing acyl homoserine lactone (AHL) molecules significantly modulated rates of N2 fixation by Trichodesmium collected from the western North Atlantic, with both positive and negative effects of varied magnitude. Changes in Trichodesmium N2 fixation did not clearly correlate with changes in microbiome composition or geochemical patterns. Metatranscriptome sequencing revealed significant changes in the relative abundance of microbiome transcripts encoding metabolic functions consistent with quorum sensing responses in model bacteria. There was little overlap in specific microbiome transcriptional responses to AHL addition between stations, and this variability in microbiome gene expression may underpin the heterogeneous changes in Trichodesmium N2 fixation. These data suggest the microbiome could play a large and previously overlooked role in modulating Trichodesmium N2 fixation. This metadata form describes the metatranscriptomic sequencing reads that were used in the study.\n\ncdm_data_type = Other\nVARIABLES:\nbioproject_accession (unitless)\nbiosample_accession (unitless)\nlibrary_ID (unitless)\ntitle (unitless)\nlibrary_strategy (unitless)\nlibrary_source (unitless)\nlibrary_selection (unitless)\nlibrary_layout (unitless)\nplatform (unitless)\ninstrument_model (unitless)\ndesign_description (unitless)\nfiletype (unitless)\nassembly (unitless)\nfilename (unitless)\n... (7 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_746654_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_746654/index.htmlTable https://www.bco-dmo.org/dataset/746654 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_746654.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_746654&showErrors=false&email= BCO-DMO bcodmo_dataset_746654
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_767737.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_767737 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_767737.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_767737/ public Velocity observations from a mooring at Station AT55 in Lake Michigan from 2018-04-05 to 2018-04-20 A fixed mooring was established to measure water column velocities in Lake Michigan near Milwaukee, WI, during 2018 from April 5 \\u2013 April 20, 2018 at a 55m depth site.  The mooring involved a large tripod, upon which two ADCPs (Nortek Aquadopp HR profiler and Nortek Signature 500) were mounted to measure water column velocities between 13cm and 5087cm above the bed.\n\ncdm_data_type = Other\nVARIABLES:\nHAB_cm (centimeters (cm))\nHAB_m (meters (m))\nlatitude (degrees_north)\nlongitude (degrees_east)\ncomponent (unitless)\nfilename (unitless)\ntime (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)\nvel (meters per second (m/s))\n https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_767737_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_767737/index.htmlTable https://www.bco-dmo.org/dataset/767737 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_767737.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_767737&showErrors=false&email= BCO-DMO bcodmo_dataset_767737

 
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