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https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_926526_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_926526_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_926526_v1/ public [AE1913 R2R ELOG] - Amended Rolling Deck to Repository (R2R) event log (ELOG) taken on the R/V Atlantic Explorer cruise AE1913 in the Sargasso Sea in June of 2019 (Collaborative Research: Direct Characterization of Adaptive Nutrient Stress Responses in the Sargasso Sea using Protein Biomarkers and a Biogeochemical AUV) The Electronic Logger (ELOG) tracked all deployments on the AE1913 cruise, including CTD, McLane pump, trace metal rosette, and AUV Clio deployment/recoveries, flow-through seawater sampling, sediment trap and plankton nets. Corresponding CTD files from each deployment are recorded in the \"comments\" column.\n\nR/V Atlantic Explorer cruise AE1913 was conducted between June 16th - 28th, 2019 in the Sargasso Sea, beginning at Bermuda Atlantic Time-series Station (BATS) and ending in the northeast shelf of Woods Hole Oceanographic Institution (WHOI).\n\ncdm_data_type = Other\nVARIABLES:\nMessage_ID (unitless)\nDate (unitless)\nEvent (unitless)\nR2R_Event (unitless)\nInstrument (unitless)\nAction (unitless)\nTransect (unitless)\nStation (unitless)\nCast (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndepth (Seafloor, m)\nAuthor (unitless)\nComment (unitless)\nCruise (unitless)\ndateTimeUTC (unitless)\nGPS_Time (unitless)\ndateTime8601 (unitless)\nRevisions (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_926526_v1_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_926526_v1_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_926526_v1/index.htmlTable https://www.bco-dmo.org/dataset/926526 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_926526_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_926526_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_926526_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_952591_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_952591_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_952591_v1/ public [BLOOFINZ-IO nutrients and isotopes] - Water column inorganic nutrient concentration and nitrate+nitrite d15N and d18O measurements from R/V Roger Revelle cruise RR2201 in the Argo Basin in the Indian Ocean from February to March of 2022 (Collaborative Research: Mesoscale variability in nitrogen sources and food-web dynamics supporting larval southern bluefin tuna in the eastern Indian Ocean) This dataset includes water column inorganic nutrient concentration and nitrate+nitrite d15N and d18O measurements from a February 2022 cruise in the Argo Basin (NW of Australia (Lat: -15, Lon 114).\n\nWater column samples were collected by Niskin bottle on a CTD rosette in the Argo basin in the Eastern Indian Ocean/Indonesian throughflow (NW of Australia) on board the R/V Roger Revelle during cruise RR2201 (BLOOFINZ-IO). Samples were collected between February 4th 2022 and March 2nd 2022.\n\ncdm_data_type = Other\nVARIABLES:\nProject (unitless)\nNutrient_bottle (unitless)\nCTD_cast (unitless)\nCTD_bottle (unitless)\ndepth (m)\nCTD_comment (unitless)\ndate (unitless)\ncycle_day (unitless)\ncycle_label (unitless)\nCycle_number (unitless)\nDay_cycle (unitless)\nEvent (unitless)\nGPS_Time (unitless)\ntime (Gps_datetime_utc, seconds since 1970-01-01T00:00:00Z)\nInstrument (unitless)\nAction (unitless)\nStation (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nSeafloor (meters (m))\nAuthor (unitless)\n... (11 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_952591_v1_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_952591_v1_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_952591_v1/index.htmlTable https://www.bco-dmo.org/dataset/952591 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_952591_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_952591_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_952591_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_658946 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_658946.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_658946/ public [Carbonate data from water samples] - Water samples from CTD casts and vehicle-mounted bottles from the R/V Atlantis, R/V Ronald Brown, R/V Falkor, & E/V Nautilus in the Gulf of Mexico & Florida from 2010 to 2014 (Lophelia OA project) (Physiological and genetic responses of the deep-water coral, Lophelia pertusa, to ongoing ocean acidification in the Gulf of Mexico) Water samples from CTD casts and vehicle-mounted bottles from the R/V Atlantis, R/V Ronald Brown, R/V Falkor, & E/V Nautilus in the Gulf of Mexico & Florida from 2010 to 2014 (Lophelia OA project)\n\ncdm_data_type = Other\nVARIABLES:\ncruise_name (unitless)\ncruise_id (unitless)\nsite (unitless)\ninstrument (unitless)\nmeasurement_location (unitless)\nsample_ID (unitless)\nyear (unitless)\nmonth (unitless)\nday\nlatitude (degrees_north)\nlongitude (degrees_east)\ndepth (m)\nsalinity (Sea Water Practical Salinity, practical salinity units (PSU))\npressure (decibar (dbar))\ntemperature (celsius)\nmeasured_temp (celsius)\ninput_pH (Input P H, total pH scale)\nTA (micromoles per killigram (umol/kg))\nnTA (N TA, micromoles per killigram (umol/kg))\npHT (P HT, total pH scale)\nomega_aragonite (unitless)\nDIC (micromoles per killigram (umol/kg))\npCO2 (P CO2, microatomospheres (uatm))\nrevelle_factor (unitless)\nbicarbonate_ion (micromoles per killigram (umol/kg))\ncarbonate_ion (micromoles per killigram (umol/kg))\nTA_DIC (unitless)\ncomments (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_658946_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_658946/index.htmlTable https://www.bco-dmo.org/dataset/658946 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_658946.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_658946&showErrors=false&email= BCO-DMO bcodmo_dataset_658946
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_781862 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_781862.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_781862/ public [Environmental Sensory Data] - Environmental, sensory data  (temperature, light intensity, salinity, pH, dissolved oxygen, depth) sampled in August 2019 in Carrie Bow Caye, Belize (Collaborative research: Is hybridization among threatened Caribbean coral species the key to their survival or the harbinger of their extinction?) Environmental, sensory data  (temperature, light intensity, salinity, pH, dissolved oxygen, depth) sampled in August 2019 in Carrie Bow Caye, Belize\n\ncdm_data_type = Other\nVARIABLES:\nSite (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ntime (ISO Date Time Local, seconds since 1970-01-01T00:00:00Z)\nISO_DateTime_UTC (ISO Date Time UTC, unitless)\nTemperature (degrees Celcius (°C))\nLight_Intensity (lux (lx))\nInstrument (unitless)\ndepth (m)\nSalinity (Sea Water Practical Salinity, parts per thousand)\nDissolved_Oxygen (Volume Fraction Of Oxygen In Sea Water, milligram per liter (mg/l))\npH (Sea Water Ph Reported On Total Scale, molar concentrations of H ions)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_781862_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_781862/index.htmlTable https://www.bco-dmo.org/dataset/781862 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_781862.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_781862&showErrors=false&email= BCO-DMO bcodmo_dataset_781862
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_753343.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_753343 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_753343.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_753343/ public [ESP 2016 Seq] - Metagenomic, metatranscriptomic, and single cell sequencing data from an Environmental Sample Processor deployment in Monterey Bay, CA in 2016. (Bacterial Taxa that Control Sulfur Flux from the Ocean to the Atmosphere) These metagenomic and metatranscriptomic time-series data cover a 52-day period in the fall of 2016 during an intense bloom of the dinoflagellate Akashiwo sanguinea in Monterey Bay, CA, USA. The dataset comprises 84 metagenomes, 82 metatranscriptomes, and 88 16S rRNA amplicon libraries that capture the functions and taxonomy the bacterial and archaeal community. In addition, 88 18S rRNA amplicon libraries describe the taxonomy of the eukaryotic community during the bloom. Microbial cells were collected at station M0 using the moored autonomous robotic Environmental Sample Processor (ESP) instrument and preserved with RNAlater in the instrument until retrieval.\n\ncdm_data_type = Other\nVARIABLES:\nGOLD_Project_ID (unitless)\nAnalysis_Project_Name (unitless)\nType (unitless)\nAssembly_Method (unitless)\nCollection_Date (unitless)\nInstrument (unitless)\nJGI_Contigs_Link (unitless)\nJGI_Project_ID (unitless)\nJGI_Sample_ID (unitless)\nJGI_Sequencing_Project_ID (unitless)\nJGI_Sequencing_Project_Name (unitless)\nLatitude_and_Longitude (Longitude, unitless)\nNCBI_BioProject_Accession (NCBI Bio Project Accession, unitless)\nNCBI_BioSample_Accession (NCBI Bio Sample Accession, unitless)\nNCBI_Project_ID (unitless)\nNCBI_SRA_Accession_ID (unitless)\nSample_Name (unitless)\nSequencing_Run_Mode (unitless)\nTotal_Bases (unitless)\nVolume_Seawater_Filtered (milliliters (mL))\nenv_biome (unitless)\n... (5 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_753343_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_753343/index.htmlTable https://www.bco-dmo.org/dataset/753343 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_753343.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_753343&showErrors=false&email= BCO-DMO bcodmo_dataset_753343
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3953.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3953 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3953.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3953/ public [event log] - Scientific sampling event log from R/V Endeavor cruise EN524 along the continental shelf of New England in 2013 (OA, Hypoxia and Warming project) (Ocean Acidification, Hypoxia and Warming: Experimental Investigations into Compounded Effects of Global Change on Benthic Foraminifera) Scientific sampling event log from R/V Endeavor cruise EN524 along the continental shelf of New England in 2013.\n\ncdm_data_type = Other\nVARIABLES:\nevent (unitless)\nsci_event (integer)\ninstrument (dimensionless)\naction (dimensionless)\nmonth_utc (unitless)\nday_utc (unitless)\nyear (unitless)\ntime_utc (unitless)\ntime (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)\nstation (dimensionless)\ndepth_w (Depth, meters)\ndepth (m)\nlatitude (degrees_north)\nlongitude (degrees_east)\nauthor (dimensionless)\ncomment (dimensionless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_3953_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3953/index.htmlTable https://www.bco-dmo.org/dataset/3953 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3953.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3953&showErrors=false&email= BCO-DMO bcodmo_dataset_3953
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3739 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3739.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3739/ public [event log] - Scientific sampling event log from R/V Knorr cruise KN207-03 in the North Atlantic (transect from Ponta Delgada, Azores to Reykjavik, Iceland) in 2012 (NA-VICE project) (Lipid lubrication of oceanic carbon and sulfur biogeochemistry via a host-virus chemical arms race) Scientific sampling event log from R/V Knorr cruise KN207-03 in the North Atlantic (transect from Ponta Delgada, Azores to Reykjavik, Iceland) in 2012. The scientific sampling event log was created using v1.0 of the Rolling Deck to Repository (R2R) event log application.\n\ncdm_data_type = Other\nVARIABLES:\nevent (unitless)\ndate_utc (unitless)\ntime_utc (HHMM)\ninstrument (text)\naction (text)\ntransect (dimensionless)\nstation (dimensionless)\ncast (dimensionless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndepth_w (Depth, meters)\nauthor (text)\ntime (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)\ncomment (text)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_3739_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3739/index.htmlTable https://www.bco-dmo.org/dataset/3739 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3739.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3739&showErrors=false&email= BCO-DMO bcodmo_dataset_3739
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_4008 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_4008.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_4008/ public [event log] - Scientific sampling event log from R/V Knorr cruise KN210-04 in the Western Atlantic Ocean between Uruguay and Barbados in 2013 (Deep Atlantic DOM project) (Dissolved Organic Matter Composition in the Deep Atlantic Ocean) Scientific sampling event log from R/V Knorr cruise KN210-04 in the Western Atlantic Ocean between Uruguay and Barbados in 2013 (Deep Atlantic DOM project).\n\ncdm_data_type = Other\nVARIABLES:\nevent (dimensionless)\ndate_utc (unitless)\ntime_utc (HHMM)\ninstrument (dimensionless)\naction (dimensionless)\nstation (dimensionless)\ncast (dimensionless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nseafloor (meters)\nauthor (dimensionless)\ncomment (dimensionless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_4008_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_4008/index.htmlTable https://www.bco-dmo.org/dataset/4008 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_4008.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_4008&showErrors=false&email= BCO-DMO bcodmo_dataset_4008
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_927550_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_927550_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_927550_v1/ public [GP17-OCE Event Log] - Scientific sampling event log from the US GEOTRACES GP17-OCE cruise on R/V Roger Revelle (RR2214) from December 2022 to January 2023 (US GEOTRACES GP17 Section: South Pacific and Southern Ocean (GP17-OCE)) This dataset is the scientific sampling event log from the US GEOTRACES GP17-OCE cruise on R/V Roger Revelle (RR2214). The expedition departed Papeete, Tahiti (French Polynesia) on December 1st, 2022 and arrived in Punta Arenas, Chile on January 25th, 2023. The cruise took place in the South Pacific and Southern Oceans aboard the R/V Roger Revelle with a team of 34 scientists led by Ben Twining (Chief Scientist), Jessica Fitzsimmons, and Greg Cutter (Co-Chief Scientists). GP17 was planned as a two-leg expedition, with its first leg (GP17-OCE) as a southward extension of the 2018 GP15 Alaska-Tahiti expedition and a second leg (GP17-ANT; December 2023-January 2024) into coastal and shelf waters of Antarctica's Amundsen Sea.\n\ncdm_data_type = Other\nVARIABLES:\nCruise (unitless)\nEvent (unitless)\nInstrument (unitless)\nAction (unitless)\nTransect (unitless)\nStation (unitless)\nCast (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nsample_depth_min (m)\nsample_depth_max (m)\nGEOTRACES_ID_Num_Range (unitless)\nSeafloor (meters (m))\nAuthor (unitless)\nComment (unitless)\nDateTimeUTC (unitless)\nISO_DateTime_UTC (seconds since 1970-01-01T00:00:00Z)\nGPS_Time (seconds since 1970-01-01T00:00:00Z)\nRevisions (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_927550_v1_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_927550_v1_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_927550_v1/index.htmlTable https://www.bco-dmo.org/dataset/927550 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_927550_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_927550_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_927550_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_672511.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_672511 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_672511.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_672511/ public [JC057 eventlog] - Event log for GEOTRACES Southwestern Atlantic Transect cruise RSS/James Cook JC057 leg 3, March 2011 (GEOTRACES-SWAT project) (A Critical Test of the Nd Paleocirculation Proxy) Event log for GEOTRACES Southwestern Atlantic Transect cruise RSS/James Cook JC057 leg 3, March 2011 (GEOTRACES-SWAT project).\n\ncdm_data_type = Other\nVARIABLES:\ncruise_id (unitless)\nstation (unitless)\ncast (unitless)\ninstrument (unitless)\naction (unitless)\ndate (unitless)\ntime2 (Time, unitless)\nlongitude (degrees_east)\nlatitude (degrees_north)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_672511_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_672511/index.htmlTable https://www.bco-dmo.org/dataset/672511 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_672511.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_672511&showErrors=false&email= BCO-DMO bcodmo_dataset_672511
log in [Kelletia kelletii: DNA and RNA sequence] - Full genome and transcriptome sequence assembly of the non-model organism Kellet’s whelk, Kelletia kelletii (Collaborative Research: RUI: Combined spatial and temporal analyses of population connectivity during a northern range expansion) Understanding the genomic characteristics of non-model organisms can bridge research gaps between ecology and evolution. However, the lack of a reference genome and transcriptome for these species makes their study challenging. Here, we complete the first full genome and transcriptome sequence assembly of the non-model organism Kellet's whelk, Kelletia kelletii, a marine gastropod exhibiting a poleward range expansion coincident with climate change. We used a combination of Oxford Nanopore Technologies, PacBio, and Illumina sequencing platforms and integrated a set of bioinformatic pipelines to create the most complete and contiguous genome documented among the Buccinoidea superfamily to date. Genome validation revealed relatively high completeness with low missing metazoan Benchmarking Universal Single-Copy Orthologs (BUSCO) and an average coverage of ∼70x for all contigs. Genome annotation identified a large number of protein-coding genes similar to some other closely related species, suggesting the presence of a complex genome structure. Transcriptome assembly and analysis of individuals during their period of peak embryonic development revealed highly expressed genes associated with specific Gene Ontology (GO) terms and metabolic pathways, most notably lipid, carbohydrate, glycan, and phospholipid metabolism. We also identified numerous heat shock proteins (HSPs) in the transcriptome and genome that may be related to coping with thermal stress during the sessile life history stage. A robust reference genome and transcriptome for the non-model organism K. kelletii provide resources to enhance our understanding of its ecology and evolution and potential mechanisms of range expansion for marine species facing environmental changes.\n\ncdm_data_type = Other\nVARIABLES:\nRun (unitless)\nAssay_Type (unitless)\nAvgSpotLen (unitless)\nBases (unitless)\nBioProject (unitless)\nBioSample (unitless)\nBioSampleModel (unitless)\nBytes (unitless)\nCenter_Name (unitless)\n... (29 more variables)\n BCO-DMO bcodmo_dataset_945292_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_914399_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_914399_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_914399_v1/ public [Microbial eukaryotic diversity: Mid-Cayman Rise SRA dataset] - 18S rRNA amplicon sequencing of microbial eukaryotes from the Mid-Cayman Rise acquired Jan-Feb, 2020 (Probing subseafloor microbial interactions via hydrothermal vent fluids: A focus on protists) Single-celled microbial eukaryotes inhabit deep-sea hydrothermal vent environments and play critical ecological roles in the vent-associated microbial food web. 18S rRNA amplicon sequencing of diffuse venting fluids from two geochemically-distinct hydrothermal vent fields was applied to investigate community diversity patterns among protistan assemblages. Piccard and Von Damm vent fields are situated 20 km apart at the Mid-Cayman Rise in the Caribbean Sea. We describe species diversity patterns with respect to hydrothermal vent field and sample type, identify putative vent endemic microbial eukaryotes, and test how vent fluid geochemistry may influence microbial community diversity. Individual vent fields supported distinct and highly diverse assemblages of protists that included potentially endemic or novel vent-associated strains. This data adds to our growing knowledge of the biogeography of deep-sea microbial eukaryotes.\n\ncdm_data_type = Other\nVARIABLES:\nExperiment_Accession (unitless)\nExperiment_Title (unitless)\nOrganism_Name (unitless)\nInstrument (unitless)\nStudy_Accession (unitless)\nStudy_Title (unitless)\nSample_Accession (unitless)\nTotal_Size_Mb (Mb)\nTotal_Bases (bp)\nLibrary_Name (unitless)\nLibrary_Strategy (unitless)\nLibrary_Source (unitless)\nLibrary_Selection (unitless)\nVent_field (unitless)\nCollection (unitless)\nVent_name (unitless)\nDiveID (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_914399_v1/index.htmlTable https://www.bco-dmo.org/dataset/914399 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_914399_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_914399_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_914399_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_4010.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_4010 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_4010.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_4010/ public [NH1106 Midwater Trawl] - Descriptive data from Isaacs-Kidd midwater trawls (IKMT) from R/V New Horizon cruise NH1106 in the Guaymas Basin in 2011 (Jumbo Squid Physiology project) (Hypoxia and the ecology, behavior and physiology of jumbo squid, Dosidicus gigas) Sampling locations, depths, times, etc. from midwater trawls performed on the NH1106 cruise in the Guaymas Basin. Samples are archived in the biocuration facility at Oregon State University.\n\ncdm_data_type = Other\nVARIABLES:\ncruise_id (text)\ninstrument (text)\ntow (integer)\nlocation (text)\nlatitude (degrees_north)\nlongitude (degrees_east)\ntarget_depths (meters)\ntarget_depth_min (meters)\ntarget_depth_max (meters)\nday_or_night (text)\ndepth_btm_min (Depth, meters)\ndepth (m)\ndate_start (unitless)\ntime_start (HH:MM)\ntime_end (HH:MM)\ntime_start_target_depth (HH:MM)\ntime_end_target_depth (HH:MM)\nsog_min (knots)\nsog_max (knots)\nwire_out_max (meters)\nportion_cod_end_filled (fraction)\npcnt_catch_preserved (percent (%))\nno_jars_preserved (integer)\nnotes (text)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_4010_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_4010/index.htmlTable https://www.bco-dmo.org/dataset/4010 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_4010.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_4010&showErrors=false&email= BCO-DMO bcodmo_dataset_4010
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2429.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2429 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2429.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_2429/ public [nmfs_CTDsb] - Seabird 911 CTD data from R/V Oceanus and R/V Edwin Link cruises OC301, OC303, EL9904, and EL9905 in the Gulf of Maine and Georges Bank from 1997-1999 as part of the U.S. GLOBEC program (GB project) (U.S. GLOBEC Georges Bank) Seabird 911 CTD data from R/V Oceanus and R/V Edwin Link cruises OC301, OC303, EL9904, and EL9905 in the Gulf of Maine and Georges Bank from 1997-1999 as part of the U.S. GLOBEC program.\n\ncdm_data_type = Other\nVARIABLES:\nyear (nd)\nship (nd)\ncruiseid (nd)\ninstrument (nd)\npi (nd)\neventno (nd)\nyrday0_utc_range (decyd:decyd)\nyrday0_local_range (decyd:decyd)\nlon_range (decdeg:decdeg)\nlat_range (Latitude, decdeg:decdeg)\nctd_range (cast:cast)\ndepth_w_range (Depth, meters:meters)\nsite (nd)\ncomments (nd)\nyrday0_utc ((noon Jan 1st = 0.5))\nyrday0_local (decimal yd)\ncast (nd)\nstation (nd)\ndepth_w (Depth, meters)\nlongitude (degrees_east)\nlatitude (degrees_north)\npress (decibars)\ntemp_ctd (degC)\nsal_ctd (PSU)\nsigmat (kg/m3 -1000)\nflvolt (volts)\nlight_tran_v (volts)\npar_scalar_v (volts)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_2429_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_2429/index.htmlTable https://www.bco-dmo.org/dataset/2429 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_2429.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_2429&showErrors=false&email= BCO-DMO bcodmo_dataset_2429
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_711846.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_711846 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_711846.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_711846/ public [Phytoplankton abundance from bottles and environmental data] - Phytoplankton abudance and physical environmental data from niskin bottles off the coast of Juneau, Alaska from 2015-2016 (SEAK-AHAB project) (Enhancing Sustainability of Shellfish Harvest in Alaska: Addressing the Ecology of Alexandrium Blooms and their Sociocultural Impacts) Phytoplankton abudance and physical environmental data from niskin bottles off the coast of Juneau, Alaska from 2015-2016 (SEAK-AHAB project)\n\ncdm_data_type = Other\nVARIABLES:\nyear (unitless)\ninvestigator (unitless)\ninstrument (unitless)\nstation (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nsite_type (unitless)\nsampling_event (unitless)\ndate (unitless)\ntime_zone (unitless)\ntime_local (unitless)\nair_temp (celsius)\nsurface_salinity (Sea Water Practical Salinity, parts per thousand (PPT))\nsurface_temp (celsius)\nweather (unitless)\ntide (unitless)\ndepth (m)\ndinoflagellates (cells per liter (cells/L))\ndiatoms (cells per Liter (cells/L))\nAlexandrium_sp (cells per Liter (cells/L))\ntime (ISO Date Time Local, seconds since 1970-01-01T00:00:00Z)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_711846_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_711846/index.htmlTable https://www.bco-dmo.org/dataset/711846 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_711846.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_711846&showErrors=false&email= BCO-DMO bcodmo_dataset_711846
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_660429.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_660429 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_660429.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_660429/ public [Phytoplankton abundance from net tows and environmental data] - Phytoplankton abudance and physical environmental data from off the coast of Juneau, Alaska from 2015-2016 (SEAK-AHAB project) (Enhancing Sustainability of Shellfish Harvest in Alaska: Addressing the Ecology of Alexandrium Blooms and their Sociocultural Impacts) Phytoplankton abudance and physical environmental data from off the coast of Juneau, Alaska from 2015-2016 (SEAK-AHAB project)\n\ncdm_data_type = Other\nVARIABLES:\nyear (unitless)\ninvestigator (unitless)\ninstrument (unitless)\nstation (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nsite_type (unitless)\nsampling_event (unitless)\ndate (unitless)\ntime_zone (unitless)\ntime_local (unitless)\nair_temp (celsius)\nsurface_salinity (Sea Water Practical Salinity, parts per thousand (PPT))\nsurface_temp (celsius)\nweather (unitless)\ntide (unitless)\ndepth (m)\ndinoflagellates (count)\ndiatoms (count)\nAlexandrium_sp (count)\nISO_DateTime_Local (ISO Date Time Local, unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_660429_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_660429/index.htmlTable https://www.bco-dmo.org/dataset/660429 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_660429.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_660429&showErrors=false&email= BCO-DMO bcodmo_dataset_660429
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_943418_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_943418_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_943418_v1/ public [RR2201 Event Log] - Scientific sampling event log from R/V Roger Revelle cruise RR2201 in the Eastern Indian Ocean (Argo Basin) from January to March 2022 (Collaborative Research: Mesoscale variability in nitrogen sources and food-web dynamics supporting larval southern bluefin tuna in the eastern Indian Ocean) This event log contains unique event numbers, locations (latitude, longitude), dates, times, and related information for sampling operations conducted for the BLOOFINZ-IO Project on cruise RR2201 (R/V Roger Revelle) off of NW Australia in January-March 2021. Submitted data for this project will reference event numbers and sampling information in this file, and this file provides the broader context for related samplings that may have been done in temporal or spatial proximity to one another.\n\ncdm_data_type = Other\nVARIABLES:\nMessage_ID (unitless)\nEvent (unitless)\nDate (unitless)\ntime (Iso_datetime_utc, seconds since 1970-01-01T00:00:00Z)\nlatitude (degrees_north)\nlongitude (degrees_east)\nInstrument (unitless)\nAction (unitless)\nTransect_Cycle (unitless)\nStation (unitless)\nCast_Tow (unitless)\nAuthor (unitless)\nComment (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_943418_v1_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_943418_v1_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_943418_v1/index.htmlTable https://www.bco-dmo.org/dataset/943418 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_943418_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_943418_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_943418_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_660308.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_660308 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_660308.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_660308/ public [Summary CTD data] - CTD summary data from phytoplankton monitoring sites in Juneau, AK sampled from 2015-2016 (SEAK-AHAB project) (Enhancing Sustainability of Shellfish Harvest in Alaska: Addressing the Ecology of Alexandrium Blooms and their Sociocultural Impacts) CTD summary data from phytoplankton monitoring sites in Juneau, AK sampled from 2015-2016 (SEAK-AHAB project)\n\ncdm_data_type = Other\nVARIABLES:\nyear (unitless)\ninvestigator (unitless)\ninstrument (unitless)\nstation (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nsampling_event (unitless)\ndate (unitless)\ntime_zone (unitless)\ntime_local (unitless)\ndepth (Cast Depth, m)\nsurface_temp (celsius)\ns_salinity (Sea Water Practical Salinity, practical salinity units (PSU))\nb_salinity (Sea Water Practical Salinity, practical salinity units (PSU))\ns_density (kilogram per meter cubed (kg/m3))\nb_density (kilogram per meter cubed (kg/m3))\nmax_fluor (milligram per meter cubed (mg/m3))\ndata_quality (unitless)\ntime (ISO Date Time Local, seconds since 1970-01-01T00:00:00Z)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_660308_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_660308/index.htmlTable https://www.bco-dmo.org/dataset/660308 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_660308.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_660308&showErrors=false&email= BCO-DMO bcodmo_dataset_660308
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_924852_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_924852_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_924852_v1/ public [Zostera marina whole genome resequencing] - Sample collection and sequence accession information for Zostera marina whole genome resequencing from specimens collected at 16 geographic locations worldwide in 2017 (Using genomics to link traits to ecosystem function in the eelgrass Zostera marina) This dataset includes sample collection and sequence accession information for Zostera marina whole genome resequencing from specimens collected at 16 geographic locations worldwide in 2017. Sequence accessions are housed in the National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA).\n\ncdm_data_type = Other\nVARIABLES:\nSampleID (unitless)\nBioProject (unitless)\nLibrary_Code (unitless)\nSample_Description (unitless)\nLocation_Name (unitless)\nlatitude (degrees_north)\nlongitude (Long, degrees_east)\nSRA_accession (unitless)\nLibrary_type (unitless)\nSampled_tissue (unitless)\nInstrument (unitless)\nreads (unitless)\nNumber_of_bases_Raw_fastq (count)\nCoverage_Raw_fastq (genomes)\nNumber_of_bases_Clean_fastq (count)\nCoverage_Clean_fastq (genomes)\nMapped_pcnt (percent)\nProperly_paired_pcnt (percent)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_924852_v1_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_924852_v1_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_924852_v1/index.htmlTable https://www.bco-dmo.org/dataset/924852 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_924852_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_924852_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_924852_v1

 
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