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https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_927890_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_927890_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_927890_v1/ public [Coral trait variation] - Growth and chlorophyll density of individual fragments of the coral Porites divaricata measured during a reciprocal transplant experiment conducted at three sites in Turneffe Atoll, Belize from February to July 2022 (OCE-PRF: Drivers of phenotypic diversity and adaptation in asexually propagating coral populations) We sought to investigate the role of genetic, intra-clonal, and environmental variation in driving variation in fitness-related traits in the Caribbean thin finger coral, Porites divaricata (Taxonomy ID: 262287). We conducted a reciprocal transplant experiment whereby fragments from individual coral colonies of known genetic background were transplanted to three sites from February to July 2022. These sites included two mangrove sites and one reef site at Calabash Caye, Turneffe Atoll, Belize. Prior to and post-transplanting, fragments were measured to determine growth rate over this time. Coral fragments were also photographed to determine red channel intensity, which serves as a proxy for chlorophyll density. \n\nThis dataset contains the measures of these two coral traits (coral fragment growth and chlorophyll density (red channel intensity)) for each coral individual and also contains metadata about the genotype, origin site, transplanted site, rope at transplanted site, and age. \n\nA related dataset contains environmental information about each transplanted site over this time period, based on loggers that recorded temperature and light levels. Data were collected by scientists at the University of Texas at Austin and the University of Belize.\n\ncdm_data_type = Other\nVARIABLES:\nsample (unitless)\norigin (unitless)\nclone (unitless)\nsubclone (unitless)\nlongitude (Sublcone_longitude, degrees_east)\nsubclone_latitude (degrees_north)\ntrans_site (unitless)\nrope (unitless)\nloc_grtn (unitless)\nage2 (years)\ngrtn (unitless)\nloc (unitless)\n... (6 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_927890_v1/index.htmlTable https://www.bco-dmo.org/dataset/927890 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_927890_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_927890_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_927890_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_942962_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_942962_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_942962_v1/ public [Pocillopora damicornis skeletal micromorphological analysis: Calyxes] - Micromorphological analyses of Pocillopora damicornis calyxes collected from reef of Heron Island, southern Great Barrier Reef from Jan 2021 to Feb 2021 (Influence of environmental pH variability and thermal sensitivity on the resilience of reef-building corals to acidification stress) Corals residing in habitats that experience frequent seawater pCO2 variability may possess an enhanced capacity to cope with ocean acidification. Yet, we lack a clear understanding of the molecular toolkit enabling acclimatization to environmental extremes, and how life-long exposure to pCO2 variability influences biomineralization. We examined the gene expression responses and micro-skeletal characteristics of Pocillopora damicornis originating from the reef flat and reef slope of Heron Island, southern Great Barrier Reef. The reef flat (454 ± 3.0) and reef slope (418 ± 1.9) had similar mean seawater pCO2 (µatm; mean ± SE), but the reef flat experienced twice the mean daily pCO2 amplitude (range of 797v. 399 µatm day-1, respectively). A controlled mesocosm experiment was conducted over eight weeks, exposing P. damicornis from the reef slope and reef flat to stable (218±9) or variable (911±31) diel pCO2 fluctuations (µatm; mean ± SE).\n\nThis dataset includes the data and analyses for the overall skeletal micromorphological analyses of P. damicornis, including the origin reef environment, treatment, colony ID, feature of interest, image magnification, image name, observer, replicate, corallite diameter, distance between corallites, area, perimeter, and circularity.\n\ncdm_data_type = Other\nVARIABLES:\nOrigin (unitless)\nTreatment (unitless)\nColony_ID (unitless)\nFeature_of_interest (unitless)\nImage_magnification (unitless)\nImage_name (unitless)\nObserver (unitless)\nReplicate (unitless)\ncorallite_diameter (units)\ncorallite_distance (millimeters (mm))\nArea (millimeters (mm))\nPerimeter (micrometers (um))\nCircularity (micrometers (um))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_942962_v1/index.htmlTable https://osprey.bco-dmo.org/dataset/942962 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_942962_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_942962_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_942962_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_942939_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_942939_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_942939_v1/ public [Pocillopora damicornis skeletal micromorphological analysis: Overall skeleton] - Micromorphological analyses of Pocillopora damicornis overall skeleton collected from reef of Heron Island, southern Great Barrier Reef from Jan 2021 to Feb 2021 (Influence of environmental pH variability and thermal sensitivity on the resilience of reef-building corals to acidification stress) Corals residing in habitats that experience frequent seawater pCO2 variability may possess an enhanced capacity to cope with ocean acidification. Yet, we lack a clear understanding of the molecular toolkit enabling acclimatization to environmental extremes, and how life-long exposure to pCO2 variability influences biomineralization. We examined the gene expression responses and micro-skeletal characteristics of Pocillopora damicornis originating from the reef flat and reef slope of Heron Island, southern Great Barrier Reef. The reef flat (454 ± 3.0) and reef slope (418 ± 1.9) had similar mean seawater pCO2 (µatm; mean ± SE), but the reef flat experienced twice the mean daily pCO2 amplitude (range of 797v. 399  µatm day-1, respectively). A controlled mesocosm experiment was conducted over eight weeks, exposing P. damicornis from the reef slope and reef flat to stable (218±9) or variable (911±31) diel pCO2 fluctuations (µatm; mean ± SE). \n\nThis dataset includes the data and analyses for the overall skeletal micromorphological analyses of P. damicornis, including the origin reef environment, treatment, colony ID, feature of interest, image magnification, image name, observer, replicate, size of image, area of image, number of corallites within image, number of corallites area-1, corallite diameter (mm), and distance between corallites (mm).\n\ncdm_data_type = Other\nVARIABLES:\nOrigin (unitless)\nTreatment (unitless)\nColony_ID (unitless)\nFeature_of_interest (unitless)\nImage_magnification (unitless)\nImage_name (unitless)\nObserver (unitless)\nReplicate (unitless)\nSize (mm)\nArea (mm2)\ncorallite_num (unitless)\ncorallite_density (corallite/mm2)\ncorallite_diameter (mm)\ncorallite_distance (mm)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_942939_v1/index.htmlTable https://osprey.bco-dmo.org/dataset/942939 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_942939_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_942939_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_942939_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_942955_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_942955_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_942955_v1/ public [Pocillopora damicornis skeletal micromorphological analysis: Spine RADs] - Micromorphological analyses of Pocillopora damicornis Spine RADs on samples collected from reef of Heron Island, southern Great Barrier Reef from Jan 2021 to Feb 2021 (Influence of environmental pH variability and thermal sensitivity on the resilience of reef-building corals to acidification stress) Corals residing in habitats that experience frequent seawater pCO2 variability may possess an enhanced capacity to cope with ocean acidification. Yet, we lack a clear understanding of the molecular toolkit enabling acclimatization to environmental extremes, and how life-long exposure to pCO2 variability influences biomineralization. We examined the gene expression responses and micro-skeletal characteristics of Pocillopora damicornis originating from the reef flat and reef slope of Heron Island, southern Great Barrier Reef. The reef flat (454 ± 3.0) and reef slope (418 ± 1.9) had similar mean seawater pCO2 (µatm; mean ± SE), but the reef flat experienced twice the mean daily pCO2 amplitude (range of 797v. 399  µatm day-1, respectively). A controlled mesocosm experiment was conducted over eight weeks, exposing P. damicornis from the reef slope and reef flat to stable (218±9) or variable (911±31) diel pCO2 fluctuations (µatm; mean ± SE). \n\nThis dataset includes the data and analyses for the overall skeletal micromorphological analyses of P. damicornis, including the origin reef environment, treatment, colony ID, feature of interest, image magnification, image name, observer, replicate, number of RADs, and area of RADs.\n\ncdm_data_type = Other\nVARIABLES:\nOrigin (unitless)\nTreatment (unitless)\nColony_ID (unitless)\nFeature_of_interest (unitless)\nImage_magnification (unitless)\nImage_name (unitless)\nObserver (unitless)\nReplicate (unitless)\nRADs_num (unitless)\nRAD_area (micrometers (um))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_942955_v1/index.htmlTable https://osprey.bco-dmo.org/dataset/942955 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_942955_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_942955_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_942955_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_942948_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_942948_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_942948_v1/ public [Pocillopora damicornis skeletal micromorphological analysis: Spine structures] - Micromorphological analyses of Pocillopora damicornis spine structures collected from reef of Heron Island, southern Great Barrier Reef from Jan 2021 to Feb 2021 (Influence of environmental pH variability and thermal sensitivity on the resilience of reef-building corals to acidification stress) Corals residing in habitats that experience frequent seawater pCO2 variability may possess an enhanced capacity to cope with ocean acidification. Yet, we lack a clear understanding of the molecular toolkit enabling acclimatization to environmental extremes, and how life-long exposure to pCO2 variability influences biomineralization. We examined the gene expression responses and micro-skeletal characteristics of Pocillopora damicornis originating from the reef flat and reef slope of Heron Island, southern Great Barrier Reef. The reef flat (454 ± 3.0) and reef slope (418 ± 1.9) had similar mean seawater pCO2 (µatm; mean ± SE), but the reef flat experienced twice the mean daily pCO2 amplitude (range of 797v. 399 µatm day-1, respectively). A controlled mesocosm experiment was conducted over eight weeks, exposing P. damicornis from the reef slope and reef flat to stable (218±9) or variable (911±31) diel pCO2 fluctuations (µatm; mean ± SE).\n\nThis dataset includes the data and analyses for the spine structures micromorphological analyses of P. damicornis, including the origin reef environment, treatment, colony ID, feature of interest, image magnification, image name, observer, replicate, spine length, spine width, and number of spines.\n\ncdm_data_type = Other\nVARIABLES:\nOrigin (unitless)\nTreatment (unitless)\nColony_ID (unitless)\nFeature_of_interest (unitless)\nImage_magnification (unitless)\nImage_name (unitless)\nObserver (unitless)\nReplicate (unitless)\nSpine_length_mm (mm)\nSpine_width_mm (mm)\nSpine_length_um (micrometers (um))\nSpine_width_um (micrometers (um))\nNum_spines_within_calyx (unitless)\nSpine_location (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_942948_v1/index.htmlTable https://osprey.bco-dmo.org/dataset/942948 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_942948_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_942948_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_942948_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_701987 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_701987.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_701987/ public [Predation Trials] - Green crab size based predation trials conducted in laboratory mesocosms at Romberg Tiburon Center, Tiburon, CA in 2015 (RAPID: A rare opportunity to examine overcompensation resulting from intensive harvest of an introduced predator) Green crab size based predation trials conducted in laboratory mesocosms at Romberg Tiburon Center, Tiburon, CA in 2015.\n\ncdm_data_type = Other\nVARIABLES:\ntrial_number (unitless)\ntime_point (unitless)\ndate (unitless)\ntank_number (unitless)\ntub_number (unitless)\npredator_size (millimeters (mm))\norigin (unitless)\ntime2 (Time, unitless)\nprey_found (unitless)\nprey_size_1 (millimeters (mm))\nprey_size_2 (millimeters (mm))\nprey_size_3 (millimeters (mm))\nprey_size_4 (millimeters (mm))\nprey_size_5 (millimeters (mm))\nnotes (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_701987/index.htmlTable https://www.bco-dmo.org/dataset/701987 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_701987.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_701987&showErrors=false&email= BCO-DMO bcodmo_dataset_701987
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_643915 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_643915.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_643915/ public [Sargassum mature growth - figure 2] - Growth of mature caged Sargassum polycystum fronds from MPAs and non-MPAs when reciprocally transplanted (Killer Seaweeds: Allelopathy against Fijian Corals) Raw data on the growth of mature Sargassum polycystum fronds originated from\nmarine protected and non-protected areas (MPAs and non-MPAs, respectively) in\nFiji, reciprocally transplanted between these areas and protected by cages.\nGrowth was measured as the difference between the final (30 days) and initial\nfrond length, measured from a standard point established using a thread when\nthe experiment was set. Details in Dell et al. 2016 Plos One.\n \nRelated Reference:  \n Dell, C., Longo, G.O., Hay, M.E. (2016) Positive feedbacks enhance\nmacroalgal resilience on Degraded Coral Reefs. Plos One.\n \nRelated Datasets:  \n[Sargassum recruit-sized survival - figure 3](\\\\http://www.bco-\ndmo.org/dataset/644035\\\\)  \n[Sargassum mature growth conspecific - figure 4](\\\\http://www.bco-\ndmo.org/dataset/644062\\\\)  \n[Sargassum recruit-sized growth and survival with conspecifics - figures 5 and\n6](\\\\https://www.bco-dmo.org/dataset/644080\\\\)\n\ncdm_data_type = Other\nVARIABLES:\nlatitude (degrees_north)\nlongitude (degrees_east)\nvillage (unitless)\nlocation (unitless)\norigin (unitless)\ngrowth (cm)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_643915_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_643915/index.htmlTable https://www.bco-dmo.org/dataset/643915 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_643915.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_643915&showErrors=false&email= BCO-DMO bcodmo_dataset_643915
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_644080 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_644080.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_644080/ public [Sargassum recruit-sized  growth and survival with conspecifics - figures 5 and 6] - Survival and growth of recruit-sized ramets growing inside or outside Sargassum beds (crowded and isolated conditions, respectively) in the MPA and non-MPA of two villages in Fiji (Killer Seaweeds: Allelopathy against Fijian Corals) Survival and growth of recruit-sized ramets of Sargassum polycystum growing\ninside or outside Sargassum beds (crowded and isolated conditions,\nrespectively) in protected and non-protected areas (MPA and non-MPA,\nrespectively) in two villages in Fiji.\n \nGrowth was obtained using the initial height measurement from each ramet and\nsubtracting it from its final height, meaning the ramets that died were\nrecorded as negative change. An average final height was calculated from two\nsub-samples (the two MPA and two non-MPA ramets) on each tile after 3 months\nof experiment. Survival was the average number of days survived by the two MPA\nramets and by the two non-MPA ramets in each tile Details in Dell et al. 2016\nPlos One.\n \nRelated Reference:  \n Dell, C., Longo, G.O., Hay, M.E. (2016) Positive feedbacks enhance\nmacroalgal resilience on Degraded Coral Reefs. Plos One.\n \nRelated Datasets:  \n[Sargassum mature growth - figure 2](\\\\http://www.bco-\ndmo.org/dataset/643915\\\\)  \n[Sargassum recruit-sized survival - figure 3](\\\\http://www.bco-\ndmo.org/dataset/644035\\\\)  \n[Sargassum mature growth conspecific - figure 4](\\\\http://www.bco-\ndmo.org/dataset/644062\\\\)\n\ncdm_data_type = Other\nVARIABLES:\norigin_location (unitless)\norigin (unitless)\nlocation (unitless)\ncondition (unitless)\n... (7 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_644080_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_644080/index.htmlTable https://www.bco-dmo.org/dataset/644080 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_644080.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_644080&showErrors=false&email= BCO-DMO bcodmo_dataset_644080
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_644035.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_644035 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_644035.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_644035/ public [Sargassum recruit-sized survival - figure 3] - Effect of habitat, origin, and herbivory on the survival and growth of recruit-sized S. polycystum fronds from MPAs and non-MPAs when reciprocally transplanted (Killer Seaweeds: Allelopathy against Fijian Corals) Raw data on the survival of recruit-sized ramets of Sargassum polycystum\noriginated from marine protected and non-protected areas (MPAs and non-MPAs,\nrespectively) in Fiji, reciprocally transplanted between these areas in two\nconditions: protected by closed cages or exposed to grazing in partially open\ncages. Survival data is the average number of days survived by the four MPA\nramets and by the four non-MPA ramets in each of the cages. Details in Dell et\nal. 2016 Plos One.\n \nRelated Datasets:  \n[Sargassum mature growth - figure 2](\\\\http://www.bco-\ndmo.org/dataset/643915\\\\)  \n[Sargassum mature growth conspecific - figure 4](\\\\http://www.bco-\ndmo.org/dataset/644062\\\\)  \n[Sargassum recruit-sized growth and survival with conspecifics - figures 5 and\n6](\\\\https://www.bco-dmo.org/dataset/644080\\\\)\n\ncdm_data_type = Other\nVARIABLES:\nlatitude (degrees_north)\nlongitude (degrees_east)\nlocation (unitless)\norigin (unitless)\ntreatment (unitless)\naverage_days_survived (days)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_644035_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_644035/index.htmlTable https://www.bco-dmo.org/dataset/644035 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_644035.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_644035&showErrors=false&email= BCO-DMO bcodmo_dataset_644035
log in [Temp & DO effects on sponges: mesocosm experimental data] - Sponge mesocosm data testing effects of temperature and dissolved oxygen on sponge filtration from experiments conducted (RAPID: Consequences of Rapid Environmental Change on Pelagic-to-Benthic Coupling by Sponges on the Continental USAs only Barrier Reef Ecosystem) This dataset contains the data from the mesocosm experiments described in the following study description.  See the \"Related Datasets\" section for more datasets from this study.\n\nStudy description:\n\nClimate change is quickly altering marine environments by increasing sea surface temperatures and decreasing dissolved oxygen (DO) levels. Although these effects have been well-studied on the declining corals, the impact of temperature and dissolved oxygen extremes on the functional roles of sponges remains primarily unexamined. This study, conducted in the Lower Florida Keys, FL (USA) had two objectives: (1) compare sponge abundance and size distributions on hardbottom before and after the summer 2023 heatwave, and (2) investigate the filtration capacity of eight common sponge species from the Florida Keys with different morphologies (tubular vs. spherical) and microbial associations (HMA vs LMA) in mesocosms that simulated elevated temperature and hypoxic conditions for ~45 minutes. Field surveys by divers at the same 24 sites in May 2023 and June 2024 revealed that the abundance and size of spheroid sponges (e.g., Speciospongia vesparium, Hippospongia lachne) declined after the heatwave, but no noticeable effects were detected among the other species surveyed. The mesocosm experiments revealed tubular and LMA sponges consistently exhibited higher filtration efficiency of high nucleic acid (HNA) bacteria than spherical and HMA sponges under most treatment conditions. Elevated temperatures (2.5 to 5°C above ambient) significantly reduced HNA bacteria filtration capacity in spherical and HMA sponges (-43.6% ± 5.1 to -21.5% ± 4.4), whereas LMA tubular sponges were unfazed (-52.3% ± 11.6% to -62.6% ± 8.8%). The findings imply that future reef communities may shift toward more sponge dominance, particularly by heat and hypoxia-resistant, fast-growing LMA species, potentially altering ecosystem functions like water quality regulation, nutrient cycling, and habitat structure.\n\ncdm_data_type = Other\nVARIABLES:\nDate (unitless)\nDay (days)\nTable (unitless)\nTank (unitless)\n... (49 more variables)\n BCO-DMO bcodmo_dataset_969125_v1

 
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