Accessing BCO-DMO data
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BCO-DMO ERDDAP
Accessing BCO-DMO data |
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| griddap | Subset | tabledap | Make A Graph | wms | files | Accessible | Title | Summary | FGDC | ISO 19115 | Info | Background Info | RSS | Institution | Dataset ID | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_775229.subset | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_775229 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_775229.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_775229/ | public | [Coral reef seawater microbial communities] - Diel, daily, and spatial variation of coral reef seawater microbial communities from US Virgin Islands, 2017 (Signature exometabolomes of Caribbean corals and influences on reef picoplankton) | Bacterial and archaeal diversity and composition, microbial cell abundances, inorganic nutrient concentrations, and physicochemical conditions were determined and measured in coral reef seawater over a three-day, diel time series on one reef in St. John, U.S. Virgin Islands.\n\ncdm_data_type = Other\nVARIABLES:\nSample_ID (unitless)\nNCBI_BioProject_accession_number (NCBI Bio Project Accession Number, unitless)\nNCBI_BioSample_accession_number (NCBI Bio Sample Accession Number, unitless)\nSample_type (unitless)\nCoral_Colony_or_sand (unitless)\nCollection_time (unitless)\nCollection_Date (unitless)\nCollection_location (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nProchlorococcus_cells_mL (Prochlorococcus Cells M L, cell/milliliter)\nSynechococcus_cells_mL (Synechococcus Cells M L, cell/milliliter)\nPicoeukaryotes_cells_mL (Picoeukaryotes Cells M L, cell/milliliter)\nUnpigmented_cells_cells_mL (Unpigmented Cells Cells M L, cell/milliliter)\nPhosphate_uM (Mass Concentration Of Phosphate In Sea Water, micromoles)\nSilicate_uM (Mass Concentration Of Silicate In Sea Water, micromoles)\nNitrate_uM (Mole Concentration Of Nitrate In Sea Water, micromoles)\nNitrite_uM (Mole Concentration Of Nitrite In Sea Water, micromoles)\nAmmonium_uM (Mole Concentration Of Ammonium In Sea Water, micromoles)\nTemperature_F (degrees Fahrenheit)\nDepth_Feet (Depth, feet)\nRelative_light_levels (lumens/foot^2)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_775229_fgdc.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_775229/index.htmlTable | https://www.bco-dmo.org/dataset/775229
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_775229.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_775229&showErrors=false&email= | BCO-DMO | bcodmo_dataset_775229 | |||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_930163_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_930163_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_930163_v1/ | public | [Kāneʻohe Bay Time-series - phytoplankton and biogeochemistry] - Biological oceanographic measurements, 16S rRNA gene amplicons and metagenomes from surface seawater taken from August 2017 to June 2021 at sites within and adjacent to Kāneʻohe Bay, Oʻahu, Hawaiʻi (Population genomics and ecotypic divergence in the most dominant lineage of marine bacteria) | These data include temperature, pH, salinity, chlorophyll a concentrations, cellular abundances of Prochlorococcus, Synechococcus, photosynthetic picoeukaryotes, and heterotrophic bacteria,16S ribosomal RNA gene amplicon libraries, metagenomes, inorganic nutrient concentrations, and photosynthetic pigment measurements via high performance liquid chromatography from surface seawater samples collected as part of the Kāneʻohe Bay Time-series (KByT). This dataset reflects near-monthly sampling of surface seawater that was conducted between between August 2017 and June 2021 at 10-12 sites within and adjacent to Kāneʻohe Bay, Oʻahu, Hawaiʻi. Instruments used were a YSI 6,600 sonde, a ProDSS multi-parameter sonde, a Turner 10AU fluorometer, a Beckman Coulter CytoFLEX S flow cytometer, a Seal Analytical AA3 HR Nutrient Autoanalyzer, an Illumina MiSeq v2 platform, and the Illumina NovaSeq 6000.\n\nThese data reveal a remarkably persistent transition in surface ocean biogeochemistry, phytoplankton biomass, and phytoplankton community structure, despite high water exchange and define surface ocean biogeochemical and phytoplankton regimes over space and time across nearshore to offshore waters in the tropical Pacific. These results provide insight into drivers of seasonal and spatial variability of phytoplankton communities. Data were collected and analyzed by Sarah J. Tucker, Yoshimi M. Rii, Kelle C. Freel, Keliʻiahonui Kotubetey, A. Hiʻilei Kawelo, and Kawika B. Winter, Michael S. Rappé.\n\ncdm_data_type = Other\nVARIABLES:\nSampleID (unitless)\nUniversal_Sample_ID (unitless)\nMetagenome (unitless)\nMetagenome_ID (unitless)\nYear (unitless)\nSampling_Order (unitless)\nSeason (unitless)\nMonth (unitless)\nMonth_abb (unitless)\nTime (hh:mm)\n... (68 more variables)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_930163_v1_fgdc.xml | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_930163_v1_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_930163_v1/index.htmlTable | https://www.bco-dmo.org/dataset/930163
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_930163_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_930163_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_930163_v1 |