Accessing BCO-DMO data
Brought to you by BCO-DMO
|
|
BCO-DMO ERDDAP
Accessing BCO-DMO data |
log in
Brought to you by BCO-DMO |
| griddap | Subset | tabledap | Make A Graph | wms | files | Accessible | Title | Summary | FGDC | ISO 19115 | Info | Background Info | RSS | Institution | Dataset ID | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| log in | [Acropora cervicornis protein measurements: nutrient- and disease-exposed] - Acropora cervicornis protein measurements: nutrient- and disease-exposed from samples collected at Mote Marine Laboratory in situ nursery from June to July 2022 (Collaborative Research: Tracking the interacting roles of the environment, host genotype, and a novel Rickettsiales in coral disease susceptibility) | In the summer of 2022, 20 ramets each of the Acropora cervicornis genotypes ML-AC-36 and ML-AC-46 were collected from Mote's in situ coral nursery and subjected to three weeks of elevated nitrate, ammonium, and phosphate in the form of a slow-release fertilizer. The duration and concentration of this exposure were selected based on prior experiments conducted at Mote Marine Laboratory, which were found to alter microbial community profiles and growth rates in A. cervicornis (Klinges et al., 2022, 2023). During experiment, corals were held in 2-gallon aquaria with 5 corals per aquarium. As Mote Marine Laboratory's experimental aquarium system is plumbed into nearshore coastal water and thus has a higher nutrient load than the reef, an additional subset of 18 ramets of each genotype was collected from Mote's in situ coral nursery immediately prior to disease challenge to evaluate the impact of nearshore water on disease response. All ramets in the disease group were subjected to disease challenge in the form of a tissue homogenate produced from diseased fragments of random genotypes of A. cervicornis. Ramets in a comparative unexposed group were exposed to a homogenate produced from healthy fragments of random genotypes of A. cervicornis. To evaluate the effect of Aquarickettsia infection; nutrient enrichment; disease exposure; and the combination of these factors on coral immune function, a number of immune related proteins and antioxidants were measured using microplate assays from a total of 55 samples taken prior to disease exposure and following disease exposure as corals either resisted or developed disease. Total host protein and the antioxidant superoxide dismutase were found to be higher in healthy corals regardless of genotype or nutrient enrichment. Phenoloxidase and prophenoloxidase were higher in concentration in diseased samples compared to healthy samples. Disease-exposed but apparently healthy corals had higher superoxide dismutase, prophenoloxidase, and peroxidase activity than either healthy unexposed corals or diseased corals despite total protein concentrations that were lower than healthy unexposed corals.\n\ncdm_data_type = Other\nVARIABLES:\nFull_ID (unitless)\nDate (unitless)\nTP (mg)\nPOX (ΔAbs470nm)\nNormalized_POX (ΔAbs470nm/mg protein)\n... (17 more variables)\n | BCO-DMO | bcodmo_dataset_924466_v1 | ||||||||||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_940735_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_940735_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_940735_v1/ | public | [In situ sediment oxygen demand and infauna] - Processed dissolved oxygen and infauna of experimental chambers and ambient sensors acquired in the shallow subtidal shore-accessible site in Bon Secour Bay, Mobile Bay, Alabama, USA between August 7-12, 2021 (CAREER: Mechanisms of bioturbation and ecosystem engineering by benthic infauna) | This data set includes data and scripts from a field study examining the effect of diel oxygen cycling on faunal activity, and in turn sediment oxygen demand. The field experiment used in situ flow-through benthic chambers to measure oxygen consumption, as described in the methods paper Gadeken et al 2023 in L&O:Methods. The chambers were deployed and retrieved in three ~24 hour deployments in a shallow subtidal area of Bon Secour Bay in Mobile Bay, AL, in August 2021. Included in this data set are the raw data files of oxygen and temperature measurements from Onset HOBO DO loggers integrated into the benthic chamber system, annotated MATLAB scripts and workspaces detailing data processing and analysis, and faunal community data from the benthic chambers.\n\ncdm_data_type = Other\nVARIABLES:\nlatitude (degrees_north)\nlongitude (degrees_east)\nStartTime (unitless)\ndayfrac (unitless)\nChamber (unitless)\nSOD (millimoles per square meter per day (mmol m-2 d-1))\nInitialDO (milligrams per liter (mg L-1))\nbiomass (grams (g))\ndeployment (unitless)\nsample (unitless)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_940735_v1_fgdc.xml | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_940735_v1_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_940735_v1/index.htmlTable | https://osprey.bco-dmo.org/dataset/940735
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_940735_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_940735_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_940735_v1 | |||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_704346 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_704346.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_704346/ | public | [Sediment fluxes] - Sediment fluxes of dissolved gasses and nutrients from the coast of North Carolina in 2010. (Microbial Regulation of Greenhouse Gas N2O Emission from Intertidal Oyster Reefs) | Sediment fluxes of dissolved gasses and nutrients from the coast of North Carolina in 2010.\n\ncdm_data_type = Other\nVARIABLES:\ndate (unitless)\nhabitat (unitless)\nreefs (unitless)\nlocation (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nnutrients (unitless)\nN_N2 (umol N m-2 hr-1)\nO2 (umol O2 m-2 hr-1)\nSOD (umol O2 m-2 hr-1)\nNOX (umol N m-2 hr-1)\nNH4 (Mole Concentration Of Ammonium In Sea Water, umol N m-2 hr-1)\nSOM (percent)\ndensity (count per square meter)\neff (percent)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_704346_fgdc.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_704346/index.htmlTable | https://www.bco-dmo.org/dataset/704346
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_704346.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_704346&showErrors=false&email= | BCO-DMO | bcodmo_dataset_704346 |