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https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_679447 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_679447.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_679447/ public [AA-CSIA Olson] - Amino acid compound-specific isotope analysis (AA-CSIA) of tissue samples from four distinct trophic groups across the food web in the pelagic eastern tropical Pacific Ocean; samples collected on NOAA cruises from July to December 2006 (CAMEO 2009 - A novel tool for validating trophic position estimates in ecosystem-based fisheries models) Amino acid compound-specific isotope analysis (AA-CSIA) of tissue samples from four distinct trophic groups across the food web in the pelagic eastern tropical Pacific Ocean; samples collected on NOAA cruises from July to December 2006.\n\ncdm_data_type = Other\nVARIABLES:\nspecies (unitless)\nsample_number (unitless)\ndate_analyzed (unitless)\nAlanine_Avg (parts per thousand (per mil, ‰))\nAlanine_SD (parts per thousand (per mil, ‰))\nGlycine_Avg (parts per thousand (per mil, ‰))\nGlycine_SD (parts per thousand (per mil, ‰))\nThreonine_Avg (parts per thousand (per mil, ‰))\nThreonine_SD (parts per thousand (per mil, ‰))\nSerine_Avg (parts per thousand (per mil, ‰))\nSerine_SD (parts per thousand (per mil, ‰))\nValine_Avg (parts per thousand (per mil, ‰))\nValine_SD (parts per thousand (per mil, ‰))\nLeucine_Avg (parts per thousand (per mil, ‰))\nLeucine_SD (parts per thousand (per mil, ‰))\nIsoleucine_Avg (parts per thousand (per mil, ‰))\nIsoleucine_SD (parts per thousand (per mil, ‰))\nProline_Avg (parts per thousand (per mil, ‰))\nProline_SD (parts per thousand (per mil, ‰))\nAsparticAcid_Avg (Aspartic Acid Avg, parts per thousand (per mil, ‰))\nAsparticAcid_SD (Aspartic Acid SD, parts per thousand (per mil, ‰))\nMethionine_Avg (parts per thousand (per mil, ‰))\nMethionine_SD (parts per thousand (per mil, ‰))\nGlutamicAcid_Avg (Glutamic Acid Avg, parts per thousand (per mil, ‰))\nGlutamicAcid_SD (Glutamic Acid SD, parts per thousand (per mil, ‰))\n... (10 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_679447/index.htmlTable https://www.bco-dmo.org/dataset/679447 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_679447.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_679447&showErrors=false&email= BCO-DMO bcodmo_dataset_679447
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_922718_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_922718_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_922718_v1/ public [Abyssal megafauna capture records] - Capture records of abyssal megafauna captured using submersibles and ROVs at Station ALOHA off Hawaii and Station M off California from 2019 to 2020 (Collaborative Research: Assessing the relative importance of small vs large particles as sources of nutrition to abyssal communities) This dataset includes the capture records for the abyssal megafauna captured as part of this food web project. Megafauna were captured using submersibles and ROVs at Station ALOHA off Hawaii and Station M off California from 2019 to 2020. These animals were captured as representatives of their abyssal food webs for an isotopic investigation of their original particulate nutritional sources (different sized particles). Each organism was identified, measured, most weighed using a motion compensated scale, and frozen for later drying and isotope analysis. For larger organisms such as holothurians or fishes, samples of tissues were taken and often the whole animal was preserved for later confirmation of taxonomic identification.\n\ncdm_data_type = Other\nVARIABLES:\nCruise_number (unitless)\nsample_code (unitless)\nSample (unitless)\nStation (unitless)\nStation_Latitude (degrees_north)\nlongitude (Station_longitude, degrees_east)\nlocal_date (unitless)\nType_of_organism (unitless)\nspecies (unitless)\nnumber (unitless)\nTotal_Length_cm (centimeters (cm))\nStandard_Length_cm (centimeters (cm))\nPreAnal_Fin_Length_cm (centimeters (cm))\nCarapace_Length_mm (millimeters (mm))\nMass_g (grams (g))\nsex (unitless)\nTissue_fin_clip (unitless)\nTissue_whole_body (unitless)\nTissue_white_muscle (unitless)\nTissue_gut_removed (unitless)\n... (9 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_922718_v1/index.htmlTable https://www.bco-dmo.org/dataset/922718 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_922718_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_922718_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_922718_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_955739_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_955739_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_955739_v1/ public [Acarta tonsa and A. hudsonica seasonal thermal limits (LD50)] - Upper thermal limits (LD50) for two common coastal copepods during thermal experiments with individuals collected from Long Island Sound between July 2017 and November 2019 (Linking eco-evolutionary dynamics of thermal adaptation and grazing in copepods from highly seasonal environments) These data include estimates of upper thermal limits for two common coastal copepods collected from Long Island Sound between July 2017 and November 2019. Individual survival measurements were made for both field and laboratory acclimated individuals exposed to temperatures ranging from 10°C to 39°C. These data highlight how acclimation and rapid adaptation may influence responses of populations to rapid climate change. Data were collected by Dr. Matthew Sasaki at the University of Connecticut.\n\ncdm_data_type = Other\nVARIABLES:\nspecies (unitless)\nacclimation (unitless)\ncollection_id (unitless)\ncollection_date (unitless)\ncollection_month (unitless)\ncollection_year (unitless)\ncollection_temp (degrees Celsius)\nacclimation_temp (degrees Celsius)\nLD50 (degrees Celsius)\nSE (degrees Celsius)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_955739_v1/index.htmlTable https://osprey.bco-dmo.org/dataset/955739 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_955739_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_955739_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_955739_v1
log in [Adult black sea bass winter survival and lipid dynamics: Laboratory-mesocosm experiment] - Adult Black Sea Bass (Centropristis striata) winter survival and lipid accumulation under varying diet and temperature conditions from a laboratory mesocosm experiment (Oct 2022 to Apr 2023) with individuals collected in Long Island Sound (Collaborative research: The genomic underpinnings of local adaptation despite gene flow along a coastal environmental cline) This dataset contains measurements from a laboratory mesocosm experiment (Oct 2022 to Apr 2023) with adult Black Sea Bass (Centropristis striata) collected in Long Island Sound.  Fish in this experiment were collected concurrently with fish sampled for a related wild-caught dataset (see 'Related Datasets' section).\n\nStudy description:\n\nWe experimentally examined overwintering potential of adult Black Sea Bass (Centropristis striata), an ecologically and economically important fish that seasonally migrates from offshore overwintering grounds to coastal feeding and nursery areas. We collected adults from Long Island Sound in September 2022 and reared them in a laboratory-mesocosm experiment under a contemporary seasonal temperature profile for Long Island Sound (LIS; October 2022 – April 2023) to assess their potential to survive and accumulate lipids throughout the winter. We also fed experimental adults two diet items (blue mussels and Atlantic herring), which are commonly found in Long Island Sound. \n\nIn addition, we sampled fish from the same reef in LIS at the start (October) and end (April) of the experiment to identify lipid dynamics in wild fish that migrate offshore (see \"Related Datasets\" section for wild fish data). Experimental C. striata growth throughout the winter was negligible with high mortality (> 50% observed). \n\nWhile survivors fed herring had higher tissue lipid contents, mortality was 2x higher than for fish fed mussels. In contrast, to the experimental fish, wild-captured fish in the spring had higher gonadosmatic indices than that for survivors across both diet treatments, which was most similar to fall-captured fish. While some fish survived throughout the winter, current winter bottom temperatures still preclude a year-round C. striata presence within Long Island Sound. Overwintering inshore is still disadvantageous compared to seasonally migrating due to surviving experimental fish having lower gonadosomatic indices, suggesting that the offshore overwintering period is a time to build energy reserves. However, as coastal waters continue to warm, changing conditions could lead populations to become year-round residents of Long Island Sound, thus increasing C. striata abundance.\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\n... (44 more variables)\n BCO-DMO bcodmo_dataset_938004_v1
log in [Adult black sea bass winter survival and lipid dynamics: Wild fish] - Adult Black Sea Bass (Centropristis striata) winter survival and lipid accumulation in wild-caught fish in Long Island Sound in Sept of 2022 to Apr of 2023 (Collaborative research: The genomic underpinnings of local adaptation despite gene flow along a coastal environmental cline) This dataset contains adult Black Sea Bass (Centropristis striata) winter survival and lipid accumulation in wild-caught fish in Long Island Sound (September 2022 to April 2023). This dataset includes data from fish collected concurrently with those used in a related mesocosm experiment (run Oct 2022 to Apr 2023), with fish collected at the same reef (see 'Related Datasets' section).\n\nStudy description:\n\nWe experimentally examined overwintering potential of adult Black Sea Bass (Centropristis striata), an ecologically and economically important fish that seasonally migrates from offshore overwintering grounds to coastal feeding and nursery areas. We collected adults from Long Island Sound in September 2022 and reared them in a laboratory-mesocosm experiment under a contemporary seasonal temperature profile for Long Island Sound (LIS; October 2022 – April 2023) to assess their potential to survive and accumulate lipids throughout the winter. We also fed experimental adults two diet items (blue mussels and Atlantic herring), which are commonly found in Long Island Sound. \n\nIn addition, we sampled fish from the same reef in LIS at the start (October) and end (April) of the experiment to identify lipid dynamics in wild fish that migrate offshore. Experimental C. striata growth throughout the winter was negligible with high mortality (> 50% observed). \n\nWhile survivors fed herring had higher tissue lipid contents, mortality was 2x higher than for fish fed mussels. In contrast, to the experimental fish, wild-captured fish in the spring had higher gonadosmatic indices than that for survivors across both diet treatments, which was most similar to fall-captured fish. While some fish survived throughout the winter, current winter bottom temperatures still preclude a year-round C. striata presence within Long Island Sound. Overwintering inshore is still disadvantageous compared to seasonally migrating due to surviving experimental fish having lower gonadosomatic indices, suggesting that the offshore overwintering period is a time to build energy reserves. However, as coastal waters continue to warm, changing conditions could lead populations to become year-round residents of Long Island Sound, thus increasing C. striata abundance.\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\n... (34 more variables)\n BCO-DMO bcodmo_dataset_938012_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_925689_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_925689_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_925689_v1/ public [Allometric scaling of calcification for Mytilus californianus] - Allometric scaling of calcification data for Mytilus californianus from 2021-2022 (OA decoupling project) (Invertebrate calcification and behavior in seawater of decoupled carbonate chemistry) Calcification rates of mussels spanning a range of sizes. These data were used to determine a biomass scaling function for the main incubation dataset (Incubation data for Mytilus californianus calcification).\n\ncdm_data_type = Other\nVARIABLES:\nspecies (unitless)\nAphiaID (unitless)\nLSID (unitless)\ndate_local (unitless)\nstart_time_local (unitless)\nISO_Start_DateTime_UTC (unitless)\nduration (hours (h))\nsalinity (PSU)\ntemperature (degrees Celcius (c))\ncalcification (umol hr^-1 g^-0.71592)\ntissue_mass (grams (g))\nshell_mass (grams (g))\nwet_mass (grams (g))\nTA (umol kg-1)\nph (unitless)\ndo (umol kg-1)\nci (umol kg-1)\nincubation_water_mass (kilograms (kg))\nbyssal_threads (threads hr-1)\ndelta_ta (umol kg-1)\ndelta_nh3 (umol kg-1)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_925689_v1/index.htmlTable https://www.bco-dmo.org/dataset/925689 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_925689_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_925689_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_925689_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_489420.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_489420 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_489420.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_489420/ public [ammonium removal by seaweeds] - Macroalgal contribution to NH4+ removal in tidepools from Cape Flattery, WA from 2010-2011 (Regenerated Nitrogen project) (The Role of Regenerated Nitrogen for Rocky Shore Productivity) We evaluated the role of mussels by adding 15N-labeled NH4+ to an assemblage\nof tidepools where they were either present at natural abundance levels, or\nabsent through manual removal. \\u00a0The role of phototrophs was separately\nexamined by conducting these experiments both during the day and at night.\n\\u00a0The tidal height of pools varied between 1.2 to 1.5 m above Mean Lower\nLow Water (MLLW). Tidepools were thus isolated from each other as well as the\nnearshore environment during the low tide period when experiments were\nconducted. Each experiment included 4 to 5 mussel removal (MR) tidepools\n(since 2002) and 4 to 5 mussel control (MC) tidepools with natural mussel\ndensities. \\u00a0In June 2010, we performed daytime NH4+ tracer experiments\nand in August 2010 nighttime experiments using the same tidepools. The\nfollowing year (July 2011) these experiments were repeated with the addition\nof bottle incubations (see below) to evaluate the effects of suspended\ntidepool components and extended sampling for 6 days after the initial 15N\naddition to test for long-term retention of NH4+. \\u00a0During the 2011\nexperiments, unforeseen rain reduced the salinity in some pools by up to 51%,\nand we have attempted to correct for the expected dilution of NH4+ in our\ntidepool rate calculations.\n \nBecause isotope enrichment levels were relatively low, we used the\nconventional delta notation instead of atom% to describe variations in 15N\nenrichment (where delta-15NH4+ = {(15N:14N sample \\u00f7 15N:14N standard)\n-1}\\u00d71000\\u2030, where the standard is atmospheric N2. \\u00a0Tracer\nlabeled ammonium chloride (15NH4Cl) was added to the pools to approximate a\n1000\\u2030 enrichment in 2010 (doubling the 15N-NH4+ concentration) and a\n2000\\u2030 enrichment in 2011(tripling the 15N-NH4+ concentration). 15N\nnatural abundance is only 0.365% and these tracer additions thus had a\nnegligible effect on the overall NH4+ concentrations increasing them by only\n~0.4% and ~0.8%, respectively. Tidepool volumes were estimated\nspectrophotometrically using varying concentrations of food dye (Pfister\n1995). Together with estimates of NH4+ concentration (from 2009 data), we\nestimated the tracer addition required to achieve the targeted 15N\nenrichments. However, the actual initial enrichments varied substantially,\n684.4 - 2406.4\\u2030 in 2010 and 781.4 - 3880.2\\u2030 in 2011, likely due to\nerror in tidepool volume estimation and natural variations in initial NH4+\nconcentrations. Fortunately, we sampled immediately following each tracer\naddition allowing for the determination of the true initial 15N enrichment.\n\\u00a0\n \nPrior to tracer addition at ebb tide, 100 mL of tidepool water was syringe-\nfiltered (Whatman GF/F) into separate HDPE bottles for natural abundance\n15NH4+ and concentration determination. \\u00a0To each pool, tracer 15NH4+ was\nthen added and distributed by stirring with a stick. Water samples were\nimmediately collected for measuring initial 15N enrichment and subsequently at\n2, 4, and 6 hour intervals to determine isotope and concentration time\ncourses. All water samples were frozen until analysis. Tidepool oxygen, pH,\nand temperature (Hach HQ4D) were also collected at ~ 2 h intervals throughout\nthe experiment.\n \nIn 2011 we also assessed the contribution of the suspended microbial community\nto NH4+ cycling by enclosing tidepool water in a 250 mL transparent\npolycarbonate incubation bottle. Following tracer addition, the bottle was\nfilled, then left to float in the tidepool for the duration of the experiment.\nSamples from bottles were filtered as described both immediately after\ncontainment and at the end of the experiment (~6 h later).\n \nWe assessed macroalgal contribution to NH4+ removal by transplanting two\ntidepool-dwelling algae species. \\u00a0Prionitis sternbergii were sampled 2\nweeks prior to the experiment for baseline natural abundance 15N values and\ntransplanted into the pools with Z-Spar Epoxy (Pfister 2007). On the day of\nthe experiment, the red-alga, Corallina vancouveriensis from a single source\npatch, was also sampled for 15N natural abundance, inserted into pieces of\nStyrofoam, and floated in each pool.\n \nAt the end of each experiment (~6 h sampling point), we sampled tidepool\nparticulate organic material (POM) by filtering through combusted GF/F filters\nuntil they clogged (~ 600 mL), comparing these samples with POM similarly\nsampled from the immediate nearshore. \\u00a0Floating Corallina spp. samples\nwere collected into clean Eppendorf tubes, and similar sized pieces of\nPrionitis spp. were collected from each pool into clean foil packets.\\u00a0  \n We evaluated the extent of longer-term 15N tracer retention in 2011 by\nsampling tidepool water, POM and transplanted Prionitis 1, 3, and 6 days\nfollowing tracer addition. We sampled at ebb tide and at again at slack water\njust prior to high tide on the first day after tracer addition (that is, 24 h\nlater) and at slack water prior to high tide on Day 3 and 6.\\u00a0\n \nRelevant References:\n \n2014\\. Pather, S., C. A. Pfister, M. Altabet, D. M. Post. Ammonium cycling in\nthe rocky intertidal: remineralization, removal and retention. Limnology and\nOceanography\n59:361-372.\\u00a0[http://aslo.org/lo/toc/vol_59/issue_2/0361.htm](\\\\http://aslo.org/lo/toc/vol_59/issue_2/0361.html\\\\)\n \nDOI for this dataset:\\u00a0The role of regenerated nitrogen for rocky shore\nproductivity, Cape Flattery, Washington, 2010 &\n2011.\\u00a0Handle:\\u00a0[http://hdl.handle.net/1912/6420](\\\\http://hdl.handle.net/1912/6420\\\\).\\u00a0DOI:10.1575/1912/6420\n \nRelated Datasets:  \n[filter tracer content](\\\\https://www.bco-dmo.org/dataset/489283\\\\)  \n[natural abundance N and C filter content](\\\\http://www.bco-\ndmo.org/dataset/489310\\\\)  \n[tidepool ammonium and mussels](\\\\https://www.bco-dmo.org/dataset/488860\\\\)  \n[tidepool incubation ammonium](\\\\https://www.bco-dmo.org/dataset/489085\\\\)\n\ncdm_data_type = Other\nVARIABLES:\nsite (unitless)\n... (10 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_489420_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_489420/index.htmlTable https://www.bco-dmo.org/dataset/489420 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_489420.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_489420&showErrors=false&email= BCO-DMO bcodmo_dataset_489420
log in [Amplicon sequence variants (ASVs) and taxonomy of Pseudo-nitzschia spp.] - Amplicon sequence variants (ASVs) and taxonomy of Pseudo-nitzschia spp. from Narragansett Bay in Rhode Island, USA and the Northeast U.S. Shelf (NES-LTER transect) from 2018-2023 (Northeast U.S. Shelf Long Term Ecological Research site) This dataset includes amplicon sequence variants (ASVs) representing species of the harmful algal bloom diatom genus Pseudo-nitzschia that were sampled from various sites in Narragansett Bay, Rhode Island, including the Narragansett Bay Long Term Plankton Time Series site, and various stations along the Northeast U.S. Shelf Long Term Ecological Research program transect. These data correspond to an analysis of Pseudo-nitzschia species composition and domoic acid toxin production during winters and summers from 2018-2023 in Narragansett Bay and the Northeast U.S. Shelf, which was prepared for submission to Harmful Algae (Roche, et al.). ASVs are also available under NCBI GenBank Accession Numbers PQ002243 - PQ002350 and MW447658 - MW447770 and raw sequencing data is available under NCBI Sequence Read Archive Accession numbers associated with BioSample accessions SAMN42123204 - 42123391 within BioProject PRJNA1129077.\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\nAssignment_method (unitless)\nNCBI_GenBank_Accession_Number (unitless)\nGenbank_ASV_number (unitless)\nASV_seq (unitless)\nBioProject (unitless)\n BCO-DMO bcodmo_dataset_936849_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_780386 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_780386.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_780386/ public [Anderson & Rynearson 2020: Skeletonema CHN] - Elemental carbon and nitrogen data for Skeletonema species as analyzed in Anderson and Rynearson, 2020 (Dimensions: Collaborative Research: Genetic, functional and phylogenetic diversity determines marine phytoplankton community responses to changing temperature and nutrients) Elemental concentrations for Skeletonema species (n=2), as analyzed in Anderson and Rynearson, 2020. This dataset includes carbon, nitrogen, and volume measurements for S. marinoi (n=3) and S. pseudocostatum (n=4) evaluated at the thermal minimum, maximum, and optimum for each strain. Strains were isolated from Narragansett Bay, Rhode Island.\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\nStrain (unitless)\nGenBank (Gen Bank, unitless)\nCollection_date (unitless)\nlatitude (Isolation Lat, degrees_north)\nlongitude (Isolation Lon, degrees_east)\nIsolation_Temperature (degrees C)\nTemperature (degrees C)\nmeanC (Mean C, picomol carbon per cell)\nseC (Se C, picomol carbon per cell)\nmeanN (Mean N, picomol nitrogen per cell)\nseN (Se N, picomol nitrogen per cell)\nmeanCN (Mean CN, unitless)\nseCN (Se CN, unitless)\nmeanV (Mean V, cubic micrometers (um3))\nseV (Se V, cubic micrometers (um3))\nmean_cd (femtomol/cubic micrometers (fmol um-3))\nse_cd (femtomol/cubic micrometers (fmol um-3))\nmean_nd (femtomol/cubic micrometers (fmol um-3))\nse_nd (femtomol/cubic micrometers (fmol um-3))\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_780386_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_780386/index.htmlTable https://www.bco-dmo.org/dataset/780386 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_780386.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_780386&showErrors=false&email= BCO-DMO bcodmo_dataset_780386
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774996 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774996.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_774996/ public [Anderson & Rynearson 2020: Skeletonema thermal growth] - Thermal growth for Skeletonema species as analyzed in Anderson and Rynearson, 2020 (Dimensions: Collaborative Research: Genetic, functional and phylogenetic diversity determines marine phytoplankton community responses to changing temperature and nutrients) Thermal growth rates for 24 strains representing 5 species from the diatom genus Skeletonema, as analyzed in Anderson and Rynearson, 2020. Strains were grown at temperatures ranging from -2 to 36C to assess how inter- and intraspecific thermal trait variability could explain diatom community dynamics.\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\nStrain (unitless)\nTemperature (degrees C)\nIsolation_Temperature (degrees C)\nGrowth (per day)\nGenBank (Gen Bank, unitless)\nCollection_date (unitless)\nlatitude (Isolation Lat, degrees_north)\nlongitude (Isolation Lon, degrees_east)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_774996_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_774996/index.htmlTable https://www.bco-dmo.org/dataset/774996 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_774996.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_774996&showErrors=false&email= BCO-DMO bcodmo_dataset_774996
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_734491 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_734491.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_734491/ public [Belize core data] - Raw coral extension, density, and calcification data from Castillo lab research in Belize, 2009, 2012, and 2015 (Investigating the influence of thermal history on coral growth response to recent and predicted end-of-century ocean warming across a cascade of ecological scales) This dataset contains raw extension, density, and calcification data from corals sampled by the Castillo lab in Belize in 2009, 2012, and 2015.\n\ncdm_data_type = Other\nVARIABLES:\nspecies (unitless)\nspecies_code (unitless)\ncore_ID (unitless)\nsite (unitless)\ntype (unitless)\nreef_zone (unitless)\ntransect (unitless)\ncore_diameter (centimeters)\nlatitude (degrees_north)\nlongitude (degrees_east)\nyear_collected (unitless)\nyear_growth (unitless)\ndensity_g_cm3 (grams/centimeter^3)\ndensity_SE (grams/centimeter^3)\nextension_cm (centimeters)\nextension_SE (centimeters)\ncalcification_g_cm2 (grams/centimeter^2)\ncalc_SE (grams/centimeter^2)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_734491_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_734491/index.htmlTable https://www.bco-dmo.org/dataset/734491 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_734491.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_734491&showErrors=false&email= BCO-DMO bcodmo_dataset_734491
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_518427 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_518427.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_518427/ public [BIB Experiments] - Experimental results: Bloom in Bottle (BIB) experiments: culture studies of the effect of Si and N stress on diatoms of the Santa Barbara Channel (SBDOM project, SBC LTER) (Mechanisms controlling the production and fate of DOM during diatom blooms) Culture studies of diatoms that dominate spring blooms in the Santa Barbara Channel were used to examine the effects of N and Si stress on the magnitude of production and the chemical composition of DOM. Species cultured were: Skeletonema costatum (CCMP 1332), Chaetoceros socialis (CCMP 172), Thalassiosira weissflogii (CCMP 1051), and Odontella aurita (CCMP 595).\n\ncdm_data_type = Other\nVARIABLES:\nspecies (text)\ndate_start (unitless)\ndate_end (unitless)\ntreatment (text)\ntime_point (alphanumeric)\nnominal_hrs (integer)\nreplicate (1 or 2)\nchl (micrograms per Liter (ug L-1))\nphyt_abun (cells per milliliter (cells/mL))\nphyt_abun_sd (cells per milliliter (cells/mL))\nNO3 (Mole Concentration Of Nitrate In Sea Water, micromolar (uM))\nSi (Mass Concentration Of Silicate In Sea Water, micromolar (uM))\nSi_bio (Mass Concentration Of Silicate In Sea Water, micromolar (uM))\nprim_prod (micromoles Carbon per Liter per day (uMol C L-1 d-1))\nER (micromoles Carbon per Liter per day (uMol C L-1 d-1))\nPOC (Particulate Organic Carbon, micromolar (uM))\nDOC (micromolar (uM))\nDOC_sd (micromolar (uM))\nTEP ((uXeq L-1))\nTEP_sd ((uXeq L-1))\nBP (picomoles per Liter per hour (pmol L-1 h-1))\nBP_sd (picomoles per Liter per hour (pmol L-1 h-1))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_518427/index.htmlTable https://www.bco-dmo.org/dataset/518427 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_518427.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_518427&showErrors=false&email= BCO-DMO bcodmo_dataset_518427
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2353 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2353.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_2353/ public [bird_observ] - Seabird Survey Observations from RVIB Nathaniel B. Palmer during cruises NBP0103, NBP0104, NBP0202, and NBP0204 in the Southern Ocean from 2001-2002 (SOGLOBEC project) (U.S. GLOBEC Southern Ocean) Seabird Survey Observations from RVIB Nathaniel B. Palmer during cruises NBP0103, NBP0104, NBP0202, and NBP0204 in the Southern Ocean from 2001-2002 (SOGLOBEC project)\n\ncdm_data_type = Other\nVARIABLES:\ncruiseid\nyear\nyrday_gmt (whole day)\ntime_gmt (HHmm.m)\ndate_gmt (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ntime_of_day\nspecies\nnumber (n/observation)\nflight_dir (degrees)\nbehav_code\ntransect_code\ncomments\nassociation (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_2353_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_2353/index.htmlTable https://www.bco-dmo.org/dataset/2353 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_2353.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_2353&showErrors=false&email= BCO-DMO bcodmo_dataset_2353
log in [Black sea bass pCO2 experiments: Morphometrics] - Morphometrics of black sea bass reared at contrasting pCO2 conditions in laboratory experiments conduced with embryos from adults collected in Long Island Sound in 2022 (Collaborative research: Understanding the effects of acidification and hypoxia within and across generations in a coastal marine fish) We experimentally examined early life CO2-sensitivities of northern stock black sea bass (Centropristis striata), an ecologically and economically important fish that seasonally migrates from offshore overwintering grounds to coastal feeding and nursery areas. We produced embryos from wild spawners and reared them until 10 days post hatch (dph) at three contrasting pCO2 levels (~400, ~2200, ~3000 µatm), finding no statistical effects of pCO2 on hatching success (~25%) or survival to 10 dph (~11%). At the extreme pCO2 level, surviving larvae were 1.2× larger and grew 55% faster compared to control pCO2 conditions.  This dataset contains black sea bass morphometrics from these experiments.\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\nDate_of_fertilization (unitless)\nDate (unitless)\nDPH (days)\nTank (unitless)\nTarget_pCO2 (microatmospheres (uatm))\npCO2 (microatmospheres (uatm))\npCO2_SD (microatmospheres (uatm))\nActual_pH (pH units)\npH_SD (pH units)\nTarget_Temperature (degrees Celsius (degC))\nActual_Temperature (degrees Celsius (degC))\nTemperature_SD (degrees Celsius (degC))\nSalinity (Practical Salinity Units (PSU))\nSalinity_SD (Practical Salinity Units (PSU))\nReplicate_ID (unitless)\nFish_ID (unitless)\nTL (millimeters (mm))\nBD (millimeters (mm))\nSL (millimeters (mm))\nED (millimeters (mm))\nML (millimeters (mm))\nCI (unitless)\n BCO-DMO bcodmo_dataset_927800_v1
log in [Black sea bass pCO2 experiments: Survival and Growth] - Hatching success, survival and growth in northern stock black sea bass reared at contrasting pCO2 conditions in laboratory experiments conduced with embryos from adults collected in Long Island Sound in 2022 (Collaborative research: Understanding the effects of acidification and hypoxia within and across generations in a coastal marine fish) We experimentally examined early life CO2-sensitivities of northern stock black sea bass (Centropristis striata), an ecologically and economically important fish that seasonally migrates from offshore overwintering grounds to coastal feeding and nursery areas. We produced embryos from wild spawners and reared them until 10 days post hatch (dph) at three contrasting pCO2 levels (~400, ~2200, ~3000 µatm), finding no statistical effects of pCO2 on hatching success (~25%) or survival to 10 dph (~11%). At the extreme pCO2 level, surviving larvae were 1.2× larger and grew 55% faster compared to control pCO2 conditions.  This dataset contains hatching success, survival, and growth data from these experiments.\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\nDate_of_fertilization (unitless)\nHatch_date (unitless)\nDate_10_dph (unitless)\nTank (unitless)\nTarget_pCO2 (microatmospheres (uatm))\npCO2 (microatmospheres (uatm))\npCO2_SD (microatmospheres (uatm))\nActual_pH (pH units)\npH_SD (pH units)\nTarget_Temperature (degrees Celsius (degC))\nActual_Temperature (degrees Celsius (degC))\nTemperature_SD (degrees Celsius (degC))\nSalinity (Practical Salinity Units (PSU))\nSalinity_SD (Practical Salinity Units (PSU))\nReplicate_ID_A (unitless)\nnum_unhatched_embryos_in_A (count (embryos))\nnum_larvae_in_A_at_0_dph (count (larvae))\nHatch_percent (percent (%))\nReplicate_ID_B (unitless)\n... (5 more variables)\n BCO-DMO bcodmo_dataset_927786_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_665454 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_665454.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_665454/ public [BLASTp homology data] - BLASTp homology data from genes obtained in samples collected on the Gould (LMG1411) cruise in the Western Antarctica Peninsula during 2014 (Polar Transcriptomes project). (Iron and Light Limitation in Ecologically Important Polar Diatoms: Comparative Transcriptomics and Development of Molecular Indicators) BLASTp homology data from genes obtained in samples collected on the Gould (LMG1411) cruise in the Western Antarctica Peninsula during 2014 (Polar Transcriptomes project).\n\ncdm_data_type = Other\nVARIABLES:\ngene (unitless)\ngenus (unitless)\nspecies (unitless)\nstrain (unitless)\nMMETSP_ID (unitless)\nsubject_ID (unitless)\ne_value (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nclade (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_665454_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_665454/index.htmlTable https://www.bco-dmo.org/dataset/665454 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_665454.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_665454&showErrors=false&email= BCO-DMO bcodmo_dataset_665454
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_896886_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_896886_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_896886_v1/ public [Bleached octocoral genotypes] - Genotypes of symbionts in Muricea atlantica, M. elongata, and Plexaurella dichotoma across the 2015 Bleaching event (May 2015-August 2017) in the Florida Keys (RAPID: Variations in symbiont diversity in octocoral across seasons and a predicted bleaching event) Alleles at four microsatellite loci, genotype based on these, fragment size of hypervariable region of the chloroplast 23S rDNA and genus of symbionts in Eunicea flexuosa, Muricea atlantica, M. elongata, and Plexaurella dichotoma across the 2015 Bleaching event (May 2015-August 2017).\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\nSample_ID (unitless)\nMonth (unitless)\nYear (unitless)\nSITE (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nComment (unitless)\nB7SYM15 (unitless)\nB7SYM34 (unitless)\nB7SYM8 (unitless)\nSYM155 (unitless)\nAssigned_Genotype (unitless)\nCP_type (unitless)\nGenus (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_896886_v1_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_896886_v1_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_896886_v1/index.htmlTable https://www.bco-dmo.org/dataset/896886 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_896886_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_896886_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_896886_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_718585_v3 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_718585_v3.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_718585_v3/ public [Bleached Octocoral Symbiont Cell Counts] - Cell counts of symbionts in Muricea atlantica, M. elongata, and Plexaurella dichotoma across the 2015 Bleaching event (May 2015 to August 2017) at Long Key in the Florida Keys (RAPID: Variations in symbiont diversity in octocoral across seasons and a predicted bleaching event) Cell counts of symbionts in Muricea atlantica, M. elongata, and Plexaurella dichotoma across the 2015 Bleaching event (May 2015 to August 2017) at Long Key in the Florida Keys.\n\ncdm_data_type = Other\nVARIABLES:\nspecies (unitless)\nyear_collection (unitless)\nmonth_collection (unitless)\nColony (unitless)\nSite (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nheight (millimeters (mm))\ndiameter (millimeters (mm))\nvol (cubic millimeters (mm^3))\ncount_1 (unitless)\ncount_2 (unitless)\ncount_3 (unitless)\ncount_4 (cells per 0.1 microliter (Cells/0.1 uL))\ncount_avg (cells per 0.1 microliter (Cells/0.1 uL))\ncount_stdev (cells per 0.1 microliter (Cells/0.1 uL))\ntotal_cells_in_sample (cells per 0.1 milliliter (Cells/0.1 mL))\ncells_vol_tissue (cells per cubic centimeter of tissue (Cells/cm3 tissue))\ncomment (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_718585_v3_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_718585_v3_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_718585_v3/index.htmlTable https://www.bco-dmo.org/dataset/718585 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_718585_v3.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_718585_v3&showErrors=false&email= BCO-DMO bcodmo_dataset_718585_v3
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_896894_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_896894_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_896894_v1/ public [Bleaching card scores] - Bleaching card scores for colonies of Muricea atlantica, M. elongata, and Plexaurella dichotoma across the 2015 Bleaching event (May 2015-August 2017) in the Florida Keys. (RAPID: Variations in symbiont diversity in octocoral across seasons and a predicted bleaching event) Visual assessment of bleaching in Muricea atlantica, M. elongata, and Plexaurella dichotoma across the 2015 Bleaching event (May 2015-August 2017) using the CoralWatch coral health chart (Siebeck et al. 2006).\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\nSample_ID (unitless)\nMonth (unitless)\nYear (unitless)\nSITE (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nComment (unitless)\nBC_Score (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_896894_v1_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_896894_v1_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_896894_v1/index.htmlTable https://www.bco-dmo.org/dataset/896894 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_896894_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_896894_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_896894_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_675211 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_675211.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_675211/ public [Bulk Raw Isotopes - Non-tunas] - Bulk raw isotopic data from tissue samples from non-tuna species collected in the eastern tropical Pacific Ocean onboard two NOAA research ships, David Starr Jordan and McArthur II, (cruises SWFSC1630 and SWFSC1631) in 2006 (CAMEO 2009 - A novel tool for validating trophic position estimates in ecosystem-based fisheries models) Bulk raw isotopic data from tissue samples from two species of ommastrephid cephalopods (squids), two species of mesopelagic myctophid fishes, and two species of euphausiid crustaceans collected in the eastern tropical Pacific Ocean onboard two NOAA research ships.\n\ncdm_data_type = Other\nVARIABLES:\nspecies (unitless)\nsample_number (unitless)\ncruise_id (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndate (unitless)\nlength (millimeters (mm))\nreplicate_number (unitless)\nd15N (D15 N, parts per thousand (per mil, ‰))\nd13C (D13 C, parts per thousand (per mil, ‰))\nMolar_C_to_N (dimensionless (ratio))\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_675211_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_675211/index.htmlTable https://www.bco-dmo.org/dataset/675211 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_675211.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_675211&showErrors=false&email= BCO-DMO bcodmo_dataset_675211
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_675055 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_675055.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_675055/ public [Bulk Raw Isotopes - Tunas] - Bulk raw isotopic data from tissue samples from three species of tunas collected in the eastern tropical Pacific Ocean onboard commercial tuna purse-seine vessels from 2003-2005 (CAMEO 2009 - A novel tool for validating trophic position estimates in ecosystem-based fisheries models) Bulk raw isotopic data from tissue samples from three species of tunas collected in the eastern tropical Pacific Ocean onboard commercial tuna purse-seine vessels.\n\ncdm_data_type = Other\nVARIABLES:\nspecies (unitless)\nsample_number (unitless)\nset_number (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndate (unitless)\nlength (millimeters (mm))\nsex (numeric (1 to 3))\nreplicate (unitless)\nd15N (D15 N, parts per thousand (per mil, ‰))\nd13C (D13 C, parts per thousand (per mil, ‰))\nMolar_C_to_N (dimensionless (ratio))\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_675055_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_675055/index.htmlTable https://www.bco-dmo.org/dataset/675055 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_675055.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_675055&showErrors=false&email= BCO-DMO bcodmo_dataset_675055
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3009 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3009.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3009/ public [calvet_ak_ltop] - AK-LTOP CalVET Net Tow counts and biomass collected from multiple cruises from the Northeast Pacific, 1997-2001 (NEP project) (U.S. GLOBEC Northeast Pacific) AK-LTOP CalVET Net Tow counts and biomass collected from multiple cruises from the Northeast Pacific, 1997-2001.\n\ncdm_data_type = Other\nVARIABLES:\ncruise_id (dimensionless)\nyear (dimensionless)\nstation_name (dimensionless)\nstation (dimensionless)\nyrday_local (dimensionless)\nmonth_local (dimensionless)\nday_local (dimensionless)\ntime_local (dimensionless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndepth_w (Depth, meters)\ndepth_cast (Depth)\nvol_filt\nspecies (dimensionless)\nfamily (dimensionless)\nphylum (dimensionless)\nsubphylum (dimensionless)\nclass (dimensionless)\nsubclass (dimensionless)\norder (dimensionless)\ninfraorder (dimensionless)\nstage (dimensionless)\nabundance (number per cubic meter)\nbiomass_g (grams wet weight per cubic meter)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_3009_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3009/index.htmlTable https://www.bco-dmo.org/dataset/3009 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3009.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3009&showErrors=false&email= BCO-DMO bcodmo_dataset_3009
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_765560 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_765560.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_765560/ public [Catch revenue by community] - Total catches and estimated revenue by species for communities-at-sea based on landings reported on Vessel Trip Reports (Adaptations of fish and fishing communities to rapid climate change) Total catches and estimated revenue by species for communities-at-sea based on landings reported on Vessel Trip Reports (VTRs). Landings data were compiled from VTRs and summed over the available years of data for each community.\n\ncdm_data_type = Other\nVARIABLES:\ncommunity (unitless)\nyears (unitless)\nsppcode (unitless)\nsppname (unitless)\nspecies (unitless)\nlbs_caught (pounds (lbs))\ntotalCatch (Total Catch, pounds (lbs))\npCatch (P Catch, unitless)\nmeanPrice (Mean Price, US dollars per pound (USD/lb))\nrev (US dollars (USD))\ntotalRev (Total Rev, US dollars (USD))\npRev (P Rev, unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_765560/index.htmlTable https://www.bco-dmo.org/dataset/765560 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_765560.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_765560&showErrors=false&email= BCO-DMO bcodmo_dataset_765560
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_666234 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_666234.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_666234/ public [Cell biovolumes] - Biovolume data from samples obtained on Gould cruise LMG1411 in the Western Antarctica Peninsula during 2014 (Polar Transcriptome project). (Iron and Light Limitation in Ecologically Important Polar Diatoms: Comparative Transcriptomics and Development of Molecular Indicators) Biovolume data from samples obtained on Gould cruise LMG1411 in the Western Antarctica Peninsula during 2014 (Polar Transcriptome project).\n\ncdm_data_type = Other\nVARIABLES:\nspecies (unitless)\nbiovolume_cell (um^3)\nsample_size (number)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_666234/index.htmlTable https://www.bco-dmo.org/dataset/666234 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_666234.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_666234&showErrors=false&email= BCO-DMO bcodmo_dataset_666234
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2339.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2339 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2339.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_2339/ public [cetaceans] - Cetacean observations from the Northern California Current in the Northeast Pacific on R/V New Horizon cruises NH0005 and NH0007 in 2000 (NEP project) (U.S. GLOBEC Northeast Pacific) Cetacean observations from the Northern California Current in the Northeast Pacific on R/V New Horizon cruises NH0005 and NH0007 in 2000\n\ncdm_data_type = Other\nVARIABLES:\ncruiseid (dimensionless)\nmonth (dimensionless)\nyear (dimensionless)\nspecies_code (dimensionless)\nspecies (dimensionless)\ncommon_name (dimensionless)\nnumber (dimensionless)\nmonth_local (dimensionless)\nday_local (dimensionless)\ntime_local (hours & decimal minutes)\nlatitude (degrees_north)\nlongitude (degrees_east)\neffort_type (dimensionless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_2339_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_2339/index.htmlTable https://www.bco-dmo.org/dataset/2339 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_2339.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_2339&showErrors=false&email= BCO-DMO bcodmo_dataset_2339
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_701701 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_701701.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_701701/ public [Clam Outplants] - Clam outplant experiments conducted in Seadrift and Bolinas Lagoon for 2015 (RAPID: A rare opportunity to examine overcompensation resulting from intensive harvest of an introduced predator) Clam outplants in Seadrift and Bolinas Lagoons (Central California coast, shallow subtidal (<2 m depth)) for 2015.\n\ncdm_data_type = Other\nVARIABLES:\nlagoon (unitless)\nsite (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndate (unitless)\nspecies_code (unitless)\nspecies (unitless)\nsize (millimeters (mm))\noutcome_code (unitless)\noutcome (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_701701_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_701701/index.htmlTable https://www.bco-dmo.org/dataset/701701 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_701701.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_701701&showErrors=false&email= BCO-DMO bcodmo_dataset_701701
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_732818.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_732818 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_732818.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_732818/ public [CO2 x temperature effects on Menidia menidia offspring] - CO2 × temperature specific early life survival and growth of Menidia menidia assessed by 5 factorial experiments (Collaborative research: Understanding the effects of acidification and hypoxia within and across generations in a coastal marine fish) In five individual rearing experiments, wild-caught M. menidia adults were spawned to test offspring sensitivity to factorial combinations of pCO2 (nominal: 400, 2200, 4000, and 6000 \\u00b5atm) and temperature (17, 20, 24, and 28 \\u00b0C) through measurements of early-life survival and growth. For experiment 1, adults were collected from Poquot Beach (40.947376, -73.10258), and the experiment took place at Stony Brook University\\u2019s Flax Pond Marine Laboratory. For experiments 2\\u20135, spawning adults were collected from Mumford Cove (41.321526, -72.015247), and experiments were conducted in the Rankin Seawater Facility at University of Connecticut\\u2019s Avery Point campus. The experiments quantified two survival and two growth traits for each replicate and CO2 \\u00d7 temperature treatment; embryo survival (fertilization to 1 dph), larval survival (1 dph to experiment termination), size (SL) at hatch (1 dph), and growth rate ((SL at end of experiment \\u2013 SL 1dph)/number days reared post hatch). These data are published in: Murray, C.S., and Baumann, H. (2018) You Better Repeat It: Complex CO2 \\u00d7 Temperature Effects in Atlantic Silverside Offspring Revealed by Serial experimentation. Diversity. doi:10.3390/d10030069.\n\ncdm_data_type = Other\nVARIABLES:\nexperiment (unitless)\nspecies (unitless)\nadult_collection_site (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ntank (unitless)\nreplicate (unitless)\ntemperature (degrees Celsius)\npH (Sea Water Ph Reported On Total Scale, pH NBS)\npCO2 (P CO2, atm)\nfertilization_date (unitless)\nhatch_sample_date (unitless)\nhatch_sample_age (days)\nfinal_sample_date (unitless)\nfinal_sample_age (days)\n... (5 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_732818_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_732818/index.htmlTable https://www.bco-dmo.org/dataset/732818 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_732818.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_732818&showErrors=false&email= BCO-DMO bcodmo_dataset_732818
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3144 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3144.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3144/ public [cod bycatch redux gear_swimming behavior] - Cod by-catch reducing gear: video observations of fish behavior from Fishing Vessels NEC-MP2000-2 in the Gulf of Maine from 2000-2002 (NEC-CoopRes project) (Northeast Consortium: Cooperative Research) Cod by-catch reducing gear: video observations of fish behavior from Fishing Vessels NEC-MP2000-2 in the Gulf of Maine from 2000-2002 (NEC-CoopRes project).\n\ncdm_data_type = Other\nVARIABLES:\nspecies\nrope_interaction\nnet_type\nbehavior (unitless)\nnumber (fish)\ntime_elapsed (minutes)\ndate_local (unitless)\nday_local (unitless)\nmonth_local (unitless)\nyear (unitless)\nyrday_local (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3144/index.htmlTable https://www.bco-dmo.org/dataset/3144 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3144.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3144&showErrors=false&email= BCO-DMO bcodmo_dataset_3144
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_897415_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_897415_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_897415_v1/ public [Colony level bleaching severity and mortality] - Coral bleaching severity and mortality data from patch reef 13 in Kāne'ohe Bay, O'ahu, Hawai'i from 2015 to 2022 (RAPID: Collaborative Research: Disentangling the effects of heat stress versus bleaching phenotype on coral performance) This dataset contains coral colony-level bleaching severity and mortality (coral genotype, bleaching phenotype, bleaching score, mortality percent) from patch reef 13 in Kāne'ohe Bay, O'ahu, Hawai'i from 2015 to 2022.\n\nThis data set was collected as part of a study of benthic community composition data from patch reef 13 and colony-level bleaching severity data. See Related Dataset \"Benthic cover\" for more data from this study.\n\nStudy abstract:\n\nIncreasingly frequent marine heatwaves are devastating coral reefs. Corals that survive these extreme events must rapidly recover if they are to withstand subsequent events, and long-term survival in the face of rising ocean temperatures may hinge on recovery capacity and acclimatory gains in heat tolerance over an individual's lifespan. To better understand coral recovery trajectories in the face of successive marine heatwaves, we monitored the responses of bleaching-susceptible and bleaching-resistant individuals of two dominant coral species in Hawaiʻi, Montipora capitata and Porites compressa, over a decade that included three marine heatwaves.\n\ncdm_data_type = Other\nVARIABLES:\nColonyID (unitless)\nSpecies (units)\nBleach (unitless)\nDate (unitless)\nScore (units)\nPhenotype\nMortality (percent  (%))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_897415_v1/index.htmlTable https://www.bco-dmo.org/dataset/897415 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_897415_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_897415_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_897415_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_662664.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_662664 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_662664.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_662664/ public [Colony to colony interactions] - Data describing interactions between colonies on St. John, Virgin Islands in 2014. (LTREB Long-term coral reef community dynamics in St. John, USVI: 1987-2019) Data describing interactions between colonies on St. John, Virgin Islands in 2014.\n\ncdm_data_type = Other\nVARIABLES:\nyear (unitless)\nseason (unitless)\nsite (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ntransect (unitless)\nmeter (meters)\nspecies (unitless)\ninteraction_type (unitless)\ndamage (unitless)\ngrowth_asym (unitless)\nheight (centimeters)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_662664_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_662664/index.htmlTable https://www.bco-dmo.org/dataset/662664 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_662664.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_662664&showErrors=false&email= BCO-DMO bcodmo_dataset_662664
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_922789_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_922789_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_922789_v1/ public [Compound specific isotope data] - Compound specific isotope data of amino acids for abyssal macrofauna, megafauna, sediments, sediment traps, and in situ filtered particles at Station ALOHA off Hawaii and Station M off California from 2019 to 2020 (Collaborative Research: Assessing the relative importance of small vs large particles as sources of nutrition to abyssal communities) This dataset includes compound specific isotope data of amino acids for abyssal macrofauna, megafauna, sediments, sediment traps, and in situ filtered particles from off California (Station M) and Hawaii (Station ALOHA) collected from 2019 to 2020. These data were collected as part of a food web project to evaluate the relative importance of small and large particle types to abyssal communities.\n\ncdm_data_type = Other\nVARIABLES:\nSample (unitless)\nCruise (unitless)\nDate_initial (unitless)\nDate_final (unitless)\nSite (unitless)\nLatitude (degrees_north)\nlongitude (degrees_east)\nType (unitless)\nSpecies (unitless)\nType_filter (unitless)\ndepth (m)\nd15N (‰, vs AIR)\nd13C (‰, vs VPDB)\nALA_N (‰, vs AIR)\nGLY_N (‰, vs AIR)\nTHR_N (‰, vs AIR)\nSER_N (‰, vs AIR)\nVAL_N (‰, vs AIR)\nLEU_N (‰, vs AIR)\nILE_N (‰, vs AIR)\nPRO_N (‰, vs AIR)\nASX_N (‰, vs AIR)\nGLX_N (‰, vs AIR)\n... (42 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_922789_v1/index.htmlTable https://www.bco-dmo.org/dataset/922789 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_922789_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_922789_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_922789_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_925714_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_925714_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_925714_v1/ public [Control incubation data during calcification experiments] - Control incubation data during Mytilus californianus calcification experiments from 2020 to 2022 (OA decoupling project) (Invertebrate calcification and behavior in seawater of decoupled carbonate chemistry) These data support Incubation data for Mytilus californianus calcification. These incubations did not contain mussels and demonstrate that background alkalinity changes during experimental modules were minor. These data support Incubation data for Mytilus californianus calcification. These data demonstrate that background alkalinity changes during experimental modules were minor.\n\ncdm_data_type = Other\nVARIABLES:\nspecies (units)\nAphiaID (unitless)\nLSID (unitless)\nmodule (unitless)\ndate_local (unitless)\nstart_time_local (unitless)\nISO_start_DateTime_UTC (unitless)\nduration (hours (h))\nsalinity (PSU)\ntemperature (degrees Celcius (c))\nTA (umol kg-1)\nph (unitless)\nhco3 (umol kg-1)\nco3 (umol kg-1)\nomega (unitless)\npco2 (uatm)\ndic (umol kg-1)\ndo (umol kg-1)\nincubation_water_mass (kilograms (kg))\ndelta_ta (umol kg-1)\ndelta_nh3 (umol kg-1)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_925714_v1/index.htmlTable https://www.bco-dmo.org/dataset/925714 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_925714_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_925714_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_925714_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_752642 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_752642.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_752642/ public [Coral 3D scans] - Coral stereolithography files and sampling information for Acropora palmata, A. cervicornis, and A. prolifera from St. Thomas U.S. Virgin Islands and Belize, 2015 (Collaborative research: Is hybridization among threatened Caribbean coral species the key to their survival or the harbinger of their extinction?) Coral specimens collected in the St. Thomas, U.S. Virgin Islands and Belize were 3-dimensionally scanned. This dataset includes metadata on the coral samples such as the collection location and conditions, and the dimensions of the samples. The STL files are available for download in the Supplemental Documentation section below.\n\ncdm_data_type = Other\nVARIABLES:\nscan_filename (unitless)\nSpecies (unitless)\nCoral_ID (unitless)\nGenetics_ID (unitless)\nLocation (unitless)\nSite (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ntime (Scan Date, seconds since 1970-01-01T00:00:00Z)\nCollection_Depth_ft (feet)\nCurrent_Direction_from (unitless)\nWave_Energy (unitless)\nBenthic_Type (unitless)\nLength_cm (centimeters)\nWidth_cm (centimeters)\nHeight_cm (centimeters)\nVolume (centimeters^3)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_752642_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_752642/index.htmlTable https://www.bco-dmo.org/dataset/752642 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_752642.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_752642&showErrors=false&email= BCO-DMO bcodmo_dataset_752642
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_708338.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_708338 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_708338.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_708338/ public [Coral calcification rates] - Coral calcification rates from experiments conducted on Oahu, Hawaii from December of 2014 to November of 2015 (Will corals recover from bleaching under ocean acidification conditions?) Coral calcification rates from experiments conducted on Oahu, Hawaii from December of 2014 to November of 2015\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\nTank (unitless)\nTreatment_pH (Treatment P H, unitless)\nTreatment_feed (unitless)\nDate_HST (unitless)\nCalcification (milligrams per gram per day (mg/g/d))\nColony_number (unitless)\nNubbin_number (unitless)\nBleach_Status_2014 (unitless)\nCollection_location (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_708338_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_708338/index.htmlTable https://www.bco-dmo.org/dataset/708338 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_708338.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_708338&showErrors=false&email= BCO-DMO bcodmo_dataset_708338
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_762511 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_762511.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_762511/ public [Coral colony sequece accessions: Hidden resilience to recurrent bleaching] - RNA sequence accession numbers for coral colonies that displayed a strong bleaching phenotype at Ofu Island, American Samoa between 2015 and 2016. (Ecological, evolutionary and physiological responses of corals to a mass bleaching event in American Samoa) RNA sequence accession numbers for coral colonies that displayed a strong bleaching phenotype at Ofu Island, American Samoa between 2015 and 2016. This dataset includes accession numbers for 36 RNAseq libraries housed at The National Center for Biotechnology Information (NCBI).\n\ncdm_data_type = Other\nVARIABLES:\nsample (unitless)\ncolony (unitless)\nspecies (uniless)\ndate (unitless)\nyear (unitless)\nmonth (unitless)\nbleaching_status (percent)\nAccession (unitless)\nAccession_link (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_762511/index.htmlTable https://www.bco-dmo.org/dataset/762511 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_762511.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_762511&showErrors=false&email= BCO-DMO bcodmo_dataset_762511
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_762497.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_762497 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_762497.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_762497/ public [Coral colony sequence accessions: The genomics of recovery from coral bleaching] - Coral colony genetic sequence accession numbers for samples collected from the lagoon environment of Ofu Island, American Samoa between 2011 and 2015. (Ecological, evolutionary and physiological responses of corals to a mass bleaching event in American Samoa) Coral colony genetic sequence accessions for samples collected from the lagoon environment of Ofu Island in the National Park of American Samoa between 2011 and 2015.\n\ncdm_data_type = Other\nVARIABLES:\nsample (unitless)\ndate (unitless)\ncolony (unitless)\nbleaching_status (percent (%))\naccession (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nspecies (unitless)\naccession_link (untiless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_762497_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_762497/index.htmlTable https://www.bco-dmo.org/dataset/762497 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_762497.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_762497&showErrors=false&email= BCO-DMO bcodmo_dataset_762497
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_658322.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_658322 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_658322/ public [Coral health status and DNA concentration] - Health status and species of each coral sample taken in the Caribbean during 2013 (Contagious coral diseases project) (Are coral diseases contagious?) Health status and species of each coral sample taken in the Caribbean during 2013 (Contagious coral diseases project)\n\ncdm_data_type = Other\nVARIABLES:\nspecies (unitless)\nhealth_status (unitless)\ndate_sampled (unitless)\ndate_tissue_airbrush (unitless)\ndate_DNA_extraction (unitless)\nsample_number (unitless)\nDNA_conc (ng mL -1)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_658322/index.htmlTable https://www.bco-dmo.org/dataset/658322 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_658322.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_658322&showErrors=false&email= BCO-DMO bcodmo_dataset_658322
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_794342.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_794342 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_794342.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_794342/ public [Coral iCA Activity] - Internal carbonic anhydrase activity in three species of coral collected from the Florida Keys in August 2013 (Ocean Acidification: Coral Inorganic Carbon Processing in Response to Ocean Acidification) Internal carbonic anhydrase activity in three species of coral collected from the Florida Keys in August 2013.\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\nSample (unitless)\nkif (/s)\nlatitude (degrees_north)\nlongitude (degrees_east)\ntime (Collection Date, seconds since 1970-01-01T00:00:00Z)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_794342_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_794342/index.htmlTable https://www.bco-dmo.org/dataset/794342 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_794342.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_794342&showErrors=false&email= BCO-DMO bcodmo_dataset_794342
log in [Coral physiological measurements] - Montipora capitata and Porites compressa Physiological Measurements for Experimental Corals and Parent Colonies from 2014-2015 (RAPID Hawaii project) (Will corals recover from bleaching under ocean acidification conditions?) Physiological data for Montipora capitata and Porites compressa: endosymbiont cell density (cells cm-2), Contribution of Total Carbon to Animal Respiration (CTAR, %), calcification (mg day-1 cm-2), biomass (g cm-2), total lipids (J gdw-1), photosynthesis and respiration (µmol hr-1 cm-2), Contribution of Zooxanthellae (Symbiodiniaceae) to Animal Respiration (CZAR, %), feeding rate (brine shrimp hr-1 cm-2), and Contribution of Heterotrophy to Animal Respiration (CHAR, %). Measurements for experimental corals were taken from one of three time points (November 2015, June 2014, or December 2015).\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\nCollection_site (unitless)\nlatitude (Latitude_decimal_degrees, degrees_north)\nlongitude (Longitude_decimal_degrees, degrees_east)\nLat (degrees_north)\nLong (degrees_east)\nColony (unitless)\nSample_ID (unitless)\nHealth_status (unitless)\npH (unitless)\nFeeding_status (unitless)\nTreatment (unitless)\nTank (unitless)\nTime_point (unitless)\nEndo_density (cells cm-2)\nCalc (mg day-1 cm-2)\nTotal_biomass (g cm-2)\nTotal_lipids (J gdw-1)\nGross_P (umol O2 min-1 cm-2)\nLEDR (unitless)\nCZAR (unitless)\nFR (Brine shrimp hr-1 cm-2)\nCHAR (unitless)\nCTAR (unitless)\n BCO-DMO bcodmo_dataset_914498_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_701751 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_701751.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_701751/ public [Cross Bay Demographics] - Demographic data for introduced crab from multiple bays along the Central California coast in 2009-2016 (RAPID: A rare opportunity to examine overcompensation resulting from intensive harvest of an introduced predator) Demographic data for introduced crab from multiple bays along the Central California coast, shallow subtidal (<3 m depth), in 2015.\n\ncdm_data_type = Other\nVARIABLES:\nbay (unitless)\nsite (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndate (unitless)\ntrap (unitless)\nspecies_code (unitless)\nspecies (unitless)\nsize (millimeters (mm))\nsex (unitless)\ngravid (unitless)\ninjury (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_701751_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_701751/index.htmlTable https://www.bco-dmo.org/dataset/701751 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_701751.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_701751&showErrors=false&email= BCO-DMO bcodmo_dataset_701751
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_911338_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_911338_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_911338_v1/ public [Cyanobacteria cultures used to generate DNA reference library] - Cyanobacteria cultures used to generate DNA reference library from samples collected from sites in Alpena and Monroe, Michigan and Palm Coast, Florida between May and June 2022. (Collaborative Research: RUI: OCE-BO: Tango in the Mat World: Biogeochemistry of diurnal vertical migration in microbial mats of Lake Huron’s sinkholes) These data are the information for each of the cultures generated from samples collected from three sites in Alpena, Michigan, one site in Monroe, Michigan, and one site in Palm Coast, Florida. Data are for cultures sequenced using Sanger sequencing and include taxonomic identification, location and sample type for samples used to develop the cultures.\nEach of these cultures was developed from high-sulfur, low-oxygen environments formed by underwater sinkholes and springs that create extreme habitats populated by microbial mat communities. Our study investigated previously undescribed diatom diversity in these habitats. Sequences from these cultures contribute to tying molecular data to morphologically identified isolates, providing a bridge between these two data types that can be used to improve metabarcoding analyses.\n\ncdm_data_type = Other\nVARIABLES:\nNCBI_Accession (unitless)\nCulture_ID (unitless)\nGenus (unitless)\nSpecies (unitless)\nMedia (unitless)\nCollection_Date (unitless)\nLocation (unitless)\nSample_Type (unitless)\nLat (degrees_north)\nlongitude (Long, degrees_east)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_911338_v1/index.htmlTable https://www.bco-dmo.org/dataset/911338 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_911338_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_911338_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_911338_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_715506 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_715506/ public [dataset8- Oxynoe sequence data] - Molecular species delimitation and gene flow in Oxynoe (PLDvFST project) (Quantifying larval behavior to reconcile genetic connectivity with biophysical model predictions) Molecular species delimitation and gene flow in Oxynoe (PLDvFST project)\n\ncdm_data_type = Other\nVARIABLES:\nspecies (unitless)\nisolate_code (unitless)\nspecimen_accession_numbers (unitless)\ncollection_site (unitless)\ndate (unitless)\ncollector (unitless)\naccession_COI (unitless)\naccession_16S (Accession 16 S, unitless)\naccession_H3 (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_715506/index.htmlTable https://www.bco-dmo.org/dataset/715506 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_715506.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_715506&showErrors=false&email= BCO-DMO bcodmo_dataset_715506
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_872323_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_872323_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_872323_v1/ public [Delaware Bay Oyster Samples] - Delaware Bay oyster archived tissues (SeaGo project) (Collaborative Research: Spatial analysis of genetic differences in salinity tolerance resulting from rapid natural selection in estuarine oysters) The Selection along Estuarine Gradients in Oysters (SEGO) project is a collaborative NSF-funded effort to measure and understand the dynamics of short term adaptive change at small spatial scale. We focused on eastern oysters as an example of a common marine life history – high fecundity, complex life cycle with early larval dispersal, and sedentary (sessile for oysters) life after larval settlement. \n\nThe data assembled in “NSF oyster tissues BCO-DMO” are collections made over three years for two types of genomic analysis: (1) annual adult samples collected along the axis of the Delaware Bay estuary to capture a gradient in potentially stressful low salinities, (2) adult samples collected from mid-bay for experimental low-salinity challenge experiments, and (3) spat and broodstock collected for low salinity challenge experiments directly on wild spat or on larval progeny of broodstock collected from low vs. moderate salinity, respectively. Transect adults were collected by dredge in 2018, 2019 and 2021 from the same 5 subset of sites, each year, that the Rutgers Haskin lab consistently monitors every year to manage the oyster fishery. By piggy backing on the Haskin monitoring effort, the SEGO project has benefited from the long term data and deep understanding that Rutgers scientists have built about the Delaware Bay oyster population. 2021 was an exception because oyster juveniles (spat) were found at three additional sites and collected and analyzed. Two replicate challenge experiments on adults were accomplished in 2019 and 2020 using similar-size oysters collected from the highest oyster density part of the Delaware Bay population where environmental variation seems to generate the least mortality. Full details on the challenge experiments, and genomic comparison of survivors vs. nonsurvivors, is being prepared for publication. \n\nThe analytical context involved low salinity challenge experiments on wild collected spat in 2020 – those methods and results are in press in Journal of Shellfish Research. Finally, broodstock collected in low vs. moderate salinity regions of the estuary were spawned to conduct a low salinity challenge experiment on their larvae, but larval performance and survival was too low for meaningful results.\n\ncdm_data_type = Other\nVARIABLES:\nDate (unitless)\n... (17 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_872323_v1/index.htmlTable https://www.bco-dmo.org/dataset/872323 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_872323_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_872323_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_872323_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_772745 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_772745.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_772745/ public [Depth ranges for global mesophotic reefs] - Depth ranges of occurrence for major functional groups of invertebrates, fish, and algae on global shallow and mesophotic reefs, 1973–2017 (Collaborative Research: Sponge Growth is Nitrogen Limited over the Shallow to Mesophotic Depth Gradient) Depth ranges of occurrence for major functional groups of invertebrates, fish, and algae on global shallow and mesophotic reefs. Studies were found in published literature from 1973 to 2017.\n\ncdm_data_type = Other\nVARIABLES:\nPublication_Short_title (unitless)\nSpecies (unitless)\nMinDepth (Min Depth, meters)\ndepth (Max Depth, m)\nTaxon (unitless)\nLocation (unitless)\nAnalysis (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_772745/index.htmlTable https://www.bco-dmo.org/dataset/772745 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_772745.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_772745&showErrors=false&email= BCO-DMO bcodmo_dataset_772745
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_911008_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_911008_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_911008_v1/ public [Diatom cultures used to generate DNA reference library] - Diatom cultures used to generate DNA reference library from samples collected from sites in Alpena, Michigan and Palm Coast, Florida between July 2021 & 2022. (Collaborative Research: RUI: OCE-BO: Tango in the Mat World: Biogeochemistry of diurnal vertical migration in microbial mats of Lake Huron’s sinkholes) These data are the information for each of the cultures generated from samples collected from three sites in Alpena, Michigan, one site in Monroe, Michigan, and one site in Palm Coast, Florida. Data are for cultures sequenced using Sanger sequencing and include taxonomic identification, location and water parameter information from samples used to develop the cultures, and growth medium.\nEach of these cultures was developed from high-sulfur, low-oxygen environments formed by underwater sinkholes and springs that create extreme habitats populated by microbial mat communities. Our study investigated previously undescribed diatom diversity in these habitats. Sequences from these cultures contribute to tying molecular data to morphologically identified isolates, providing a bridge between these two data types that can be used to improve metabarcoding analyses.\n\ncdm_data_type = Other\nVARIABLES:\nNCBI_Accession (unitless)\nCulture_ID (unitless)\nGenus (unitless)\nSpecies (unitless)\nVariety (unitless)\nCollection_ID (unitless)\nMedia (unitless)\nCollection_Date (Month/Day/Year)\nLocation (unitless)\nSample_Type (unitless)\nLat (degrees_north)\nlongitude (Long, degrees_east)\nTemp (Celsius (°C))\nCond (Microsiemens / centimeter (μS/cm))\nTDS (Grams/liter (g/L))\npH (unitless)\nORP (Millivolts (mV))\nNTU (Nephelometric Turbidity Units (NTU))\nODO (Percentage saturation)\n... (6 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_911008_v1/index.htmlTable https://www.bco-dmo.org/dataset/911008 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_911008_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_911008_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_911008_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_666201 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_666201.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_666201/ public [Diatom growth rates] - Diatom growth rates from samples collected on the Gould cruise LMG1411 in the Western Antarctica Peninsula from 2014 (Polar Transcriptomes project) (Iron and Light Limitation in Ecologically Important Polar Diatoms: Comparative Transcriptomics and Development of Molecular Indicators) Diatom growth rates from samples collected on the Gould cruise LMG1411 in the Western Antarctica Peninsula from 2014 (Polar Transcriptomes project)\n\ncdm_data_type = Other\nVARIABLES:\nspecies (unitless)\ntreatment (unitless)\nmean_specific_u (d -1)\nrelative_u (unitless)\nstd_error_u (unitless)\npropogation_error_u (unitless)\nsample_size_u (unitless)\nmean_FvFm (Mean Fv Fm, unitless)\nrelative_FvFm (Relative Fv Fm, unitless)\nstd_error_FvFm (Std Error Fv Fm, unitless)\npropogation_error_FvFm (Propogation Error Fv Fm, unitless)\nsample_size_FvFm (Sample Size Fv Fm, unitless)\nmean_sigma (A2 quanta -1)\nrelative_sigma (unitless)\nstd_error_sigma (unitless)\npropogation_error_sigma (unitless)\nsample_size_sigma (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_666201/index.htmlTable https://www.bco-dmo.org/dataset/666201 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_666201.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_666201&showErrors=false&email= BCO-DMO bcodmo_dataset_666201
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_907321_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_907321_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_907321_v1/ public [Ecological monitoring Natividad 2006-2021: Algae] - Ecological monitoring of algae on Isla Natividad from 2006 to 2021 (Collaborative Research: Evaluating how abalone populations in the California Current are structured by the interplay of large-scale oceanographic forcing and nearshore variability) This dataset encompasses information about algae transects between 2006 to 2021 in Isla Natividad, Baja California Sur, Mexico. Abundances of algae and the number of stipes of each individual algae can be found in the data set. Also, the dates when the transects were done, the site, the name of the diver, the depth the transect was laid, if the site was a marine reserve or not, if the site is inside a marine protected area or not, the latitude and longitude of the sites, the temperature of the water, the number of transect from where the information was counted, and the species name of algae counted.\n\nEcological monitoring is important to collect data of species that inhabit an specific ecosystem. For this data set, we present all the data form 2006 to 2021 on algae, marine invertebrates, fish and uniform point contact at six different sites in Isla Natividad off the coast of Baja California Sur, Mexico. Data was collected once a year by trained divers as a collaborative effort from Stanford University, non-governmental organizations, and fishing cooperative federations. These data provides the abundaces of algae, invertebrates, fish and substrate  of Isla Natividad over the spam of 15 years and may be use to assess changes in the ecosystems after shocks such as hypoxic events or marine heatwaves.\n\ncdm_data_type = Other\nVARIABLES:\nID (unitless)\nDAY (unitless)\nMONTH (unitless)\nYEAR (unitless)\nSTATE (unitless)\nCOMMUNITY (unitless)\nSITE (unitless)\nLAT (degrees_north)\nlongitude (Long, degrees_east)\nHABITAT (unitless)\nZONE (unitless)\nPROTECTION (unitless)\n... (18 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_907321_v1/index.htmlTable https://www.bco-dmo.org/dataset/907321 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_907321_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_907321_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_907321_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_907363_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_907363_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_907363_v1/ public [Ecological monitoring Natividad 2006-2021: Fish] - Ecological monitoring of fish on Isla Natividad from 2006 to 2021 (Collaborative Research: Evaluating how abalone populations in the California Current are structured by the interplay of large-scale oceanographic forcing and nearshore variability) This dataset encompasses information about fish transects between 2006 to 2021 in Isla Natividad. Abundances, sex and size of fish can be found in the data set. Also, the dates when the transects were done, the site, the name of the diver, the depth the transect was laid, if the site was a marine reserve or not, if the site is inside a marine protected area or not, the latitude and longitude of the sites, the temperature of the water, the number of transect from where the information was counted, and the species name of the fish counted.\n\nEcological monitoring is important to collect data of species that inhabit an specific ecosystem. For this data set, we present all the data form 2006 to 2021 on algae, marine invertebrates, fish and uniform point contact at six different sites in Isla Natividad off the coast of Baja California Sur, Mexico. Data was collected once a year by trained divers as a collaborative effort from Stanford University, non-governmental organizations, and fishing cooperative federations. These data provides the abundaces of algae, invertebrates, fish and substrate  of Isla Natividad over the spam of 15 years and may be use to assess changes in the ecosystems after shocks such as hypoxic events or marine heatwaves.\n\ncdm_data_type = Other\nVARIABLES:\nID (unitless)\nDAY (unitless)\nMONTH (unitless)\nYEAR (unitless)\nSTATE (unitless)\nCOMMUNITY (unitless)\nSITE (unitless)\nLAT (degrees_north)\nlongitude (Long, degrees_east)\nHABITAT (unitless)\nZONE (unitless)\nPROTECTION (unitless)\nMPA (unitless)\n... (15 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_907363_v1/index.htmlTable https://www.bco-dmo.org/dataset/907363 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_907363_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_907363_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_907363_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_907353_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_907353_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_907353_v1/ public [Ecological monitoring Natividad 2006-2021: Invertebrates] - Ecological monitoring of marine invertebrates on Isla Natividad from 2006 to 2021 (Collaborative Research: Evaluating how abalone populations in the California Current are structured by the interplay of large-scale oceanographic forcing and nearshore variability) This dataset encompasses information about marine invertebrates transects between 2006 to 2021 in Isla Natividad. Abundances of invertebrates can be found in the data set. Also, the dates when the transects were done, the site, the name of the diver, the depth the transect was laid, if the site was a marine reserve or not, if the site is inside a marine protected area or not, the latitude and longitude of the sites, the temperature of the water, the number of transect from where the information was counted, and the species name of each invertebrate counted.\n\nEcological monitoring is important to collect data of species that inhabit an specific ecosystem. For this data set, we present all the data form 2006 to 2021 on algae, marine invertebrates, fish and uniform point contact at six different sites in Isla Natividad off the coast of Baja California Sur, Mexico. Data was collected once a year by trained divers as a collaborative effort from Stanford University, non-governmental organizations, and fishing cooperative federations. These data provides the abundaces of algae, invertebrates, fish and substrate  of Isla Natividad over the spam of 15 years and may be use to assess changes in the ecosystems after shocks such as hypoxic events or marine heatwaves.\n\ncdm_data_type = Other\nVARIABLES:\nID (unitless)\nDAY (unitless)\nMONTH (unitless)\nYEAR (unitless)\nSTATE (unitless)\nCOMMUNITY (unitless)\nSITE (unitless)\nLAT (degrees_north)\nlongitude (Long, degrees_east)\nHABITAT (unitless)\nZONE (unitless)\nPROTECTION (unitless)\nMPA (unitless)\n... (13 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_907353_v1/index.htmlTable https://www.bco-dmo.org/dataset/907353 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_907353_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_907353_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_907353_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_793674 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_793674.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_793674/ public [Edmunds et al. 2019b: Sizes of organisms fixed to flume floor] - Sizes of organisms fixed to flume floor from back reef community flume experiments conducted in Moorea, French Polynesia, from Nov 2015 to Nov 2016 (Collaborative Research: Ocean Acidification and Coral Reefs: Scale Dependence and Adaptive Capacity) These data describe the fauna that was secured to a metal grid in the bottom of the flume.  These data are results of an experiment incubating a back reef community from Moorea, French Polynesia, for one year at high pCO2 (published in Edmunds et al. 2019) from Nov of 2015 to Nov of 2016.\n\ncdm_data_type = Other\nVARIABLES:\nFlume (unitless)\nID_number (unitless)\nSpecies (unitless)\nInitial (grams (g))\nFinal (grams (g))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_793674/index.htmlTable https://www.bco-dmo.org/dataset/793674 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_793674.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_793674&showErrors=false&email= BCO-DMO bcodmo_dataset_793674
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_793628 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_793628.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_793628/ public [Edmunds et al. 2019b: Sizes of organisms not fixed to flume floor] - Sizes of organisms not fixed to flume floor from back reef community flume experiments conducted in Moorea, French Polynesia, from Nov 2015 to Nov 2016 (Collaborative Research: Ocean Acidification and Coral Reefs: Scale Dependence and Adaptive Capacity) These data describe the mobile fauna in the flumes that were not fixed to the bottom of the flume. These data are results of an experiment incubating a back reef community from Moorea, French Polynesia, for one year at high pCO2 (published in Edmunds et al. 2019) from Nov of 2015 to Nov of 2016.\n\ncdm_data_type = Other\nVARIABLES:\nFlume (unitless)\nID_number (unitless)\nSpecies (unitless)\nMonth_Number (unitless)\nMass (grams (g))\nMonth (unitless)\nYear (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_793628/index.htmlTable https://www.bco-dmo.org/dataset/793628 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_793628.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_793628&showErrors=false&email= BCO-DMO bcodmo_dataset_793628
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_924650_v1 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_924650_v1/ public [Edmunds et al. 2020 ICES: pCO2 flume - Coral area] - Coral area from a study of year-long effects of high pCO2 on the community structure of a tropical fore reef assembled in outdoor flumes in Moorea, French Polynesia from 2017 to 2018 (RUI: Ocean Acidification- Category 1- The effects of ocean acidification on the organismic biology and community ecology of corals, calcified algae, and coral reefs) This coral calcification dataset includes the areas of corals as they changed over a year-long experiment. Flume physical and chemical conditions are provided as a supplemental file. These data are part of a study of year-long effects of high pCO2 on the community structure of a tropical fore reef assembled in outdoor flumes in Moorea, French Polynesia from 2017 to 2018.  \n\nThese coral calcification data support publication (Edmunds et al., 2020; doi:10.1093/icesjms/fsaa015) with the following abstract:\n\nIn this study, fore reef coral communities were exposed to high pCO2 for a year to explore the relationship between net accretion (Gnet) and community structure (planar area growth). Coral reef communities simulating the fore reef at 17-m depth on Mo'orea, French Polynesia, were assembled in three outdoor flumes (each 500 l) that were maintained at ambient (396 matm), 782 matm, and 1434 matm pCO2, supplied with seawater at 300 l h 1, and exposed to light simulating 17-m depth. The communities were constructed using corals from the fore reef, and the responses of massive Porites spp., Acropora spp., and Pocillopora verrucosa were assessed through monthly measurements of Gnet and planar area. High pCO2 depressed Gnet but did not affect colony area by taxon, although the areas of Acropora spp. and P. verrucosa summed to cause multivariate community structure to differ among treatments. These results suggest that skeletal plasticity modulates the effects of reduced Gnet at high pCO2 on planar growth, at least over a year. The low sensitivity of the planar growth of fore reef corals to the effects of ocean acidification.\n\ncdm_data_type = Other\nVARIABLES:\nFlume (unitless)\nYear_Month (unitless)\nSample (unitless)\nType (unitless)\nSpecies (unitless)\npercent_area (percent (%))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_924650_v1/index.htmlTable https://www.bco-dmo.org/dataset/924650 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_924650_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_924650_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_924650_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_924603_v1 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_924603_v1/ public [Edmunds et al. 2020 ICES: pCO2 flume - Coral weight] - Coral weight from a study of year-long effects of high pCO2 on the community structure of a tropical fore reef assembled in outdoor flumes in Moorea, French Polynesia from 2017 to 2018 (RUI: Ocean Acidification- Category 1- The effects of ocean acidification on the organismic biology and community ecology of corals, calcified algae, and coral reefs) This coral calcification dataset includes the weight of the corals as used to report net changes in mass (Gnet). Flume physical and chemical conditions are provided as a supplemental file.  These data are part of a study of year-long effects of high pCO2 on the community structure of a tropical fore reef assembled in outdoor flumes in Moorea, French Polynesia from 2017 to 2018.  \n\nThese coral calcification data support publication (Edmunds et al., 2020; doi:10.1093/icesjms/fsaa015) with the following abstract:\n\nIn this study, fore reef coral communities were exposed to high pCO2 for a year to explore the relationship between net accretion (Gnet) and community structure (planar area growth). Coral reef communities simulating the fore reef at 17-m depth on Mo'orea, French Polynesia, were assembled in three outdoor flumes (each 500 l) that were maintained at ambient (396 matm), 782 matm, and 1434 matm pCO2, supplied with seawater at 300 l h 1, and exposed to light simulating 17-m depth. The communities were constructed using corals from the fore reef, and the responses of massive Porites spp., Acropora spp., and Pocillopora verrucosa were assessed through monthly measurements of Gnet and planar area. High pCO2 depressed Gnet but did not affect colony area by taxon, although the areas of Acropora spp. and P. verrucosa summed to cause multivariate community structure to differ among treatments. These results suggest that skeletal plasticity modulates the effects of reduced Gnet at high pCO2 on planar growth, at least over a year. The low sensitivity of the planar growth of fore reef corals to the effects of ocean acidification.\n\ncdm_data_type = Other\nVARIABLES:\nFlume (unitless)\nYear_Month (unitless)\nSample (unitless)\nType (unitless)\nFunctional_group (unitless)\nSpecies (unitless)\nLTER_Site (unitless)\nWeight (grams (g))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_924603_v1/index.htmlTable https://www.bco-dmo.org/dataset/924603 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_924603_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_924603_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_924603_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_655301.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_655301 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_655301.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_655301/ public [Effect of lionfish density on native reef fishes] - Effect of lionfish densities on native coral-reef fishes from Lee Stocking Island, Bahamas during 2009-2012 (Biodiversity Loss Effects Lionfish project) (Mechanisms and Consequences of Fish Biodiversity Loss on Atlantic Coral Reefs Caused by Invasive Pacific Lionfish) Effect of lionfish densities on native coral-reef fishes from Lee Stocking Island, Bahamas during 2009-2012 (Biodiversity Loss Effects Lionfish project)\n\ncdm_data_type = Other\nVARIABLES:\nyear (unitless)\nreef_type (unitless)\nmonth (unitless)\nvisit_number (unitless)\nday (unitless)\nreef_number (unitless)\ntime_start (unitless)\ntime_end (unitless)\nlionfish_density_initial (count per meter squared)\nlionfish_density_mean (count per meter squared)\nspecies (unitless)\nlength_max_1 (count)\nlength_max_2 (count)\nlength_max_3 (count)\nlength_max_4 (count)\nlength_max_5 (count)\nlength_max_10 (count)\nlength_max_15 (count)\nlength_max_20 (count)\nlength_max_25 (count)\nlength_max_30 (count)\nlength_max_35 (count)\nlength_max_40 (count)\nlength_max_45 (count)\nlength_max_50 (count)\nlength_max_100 (count)\nlength_max_150 (count)\ninvert_count (count)\nnotes (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_655301/index.htmlTable https://www.bco-dmo.org/dataset/655301 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_655301.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_655301&showErrors=false&email= BCO-DMO bcodmo_dataset_655301
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_655342.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_655342 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_655342.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_655342/ public [Effect of lionfish in main seagrass habitats] - Effect of lionfish presence on native fish abundance in main reefs where lionfish resided on Eleuthera, Bahamas during 2013 (Biodiversity Loss Effects Lionfish project) (Mechanisms and Consequences of Fish Biodiversity Loss on Atlantic Coral Reefs Caused by Invasive Pacific Lionfish) Effect of lionfish presence on native fish abundance in main reefs where lionfish resided on Eleuthera, Bahamas during 2013 (Biodiversity Loss Effects Lionfish project)\n\ncdm_data_type = Other\nVARIABLES:\nyear (unitless)\nmonth (unitless)\nvisit_number (unitless)\nday (unitless)\ntreatment (unitless)\nreef (unitless)\nstart (unitless)\nend (unitless)\nspecies (unitless)\nlength_max_1 (count)\nlength_max_2 (count)\nlength_max_3 (count)\nlength_max_4 (count)\nlength_max_5 (count)\nlength_max_6 (count)\nlength_max_7 (count)\nlength_max_8 (count)\nlength_max_9 (count)\nlength_max_10 (count)\nlength_max_15 (count)\nlength_max_20 (count)\nlength_max_25 (count)\nlength_max_30 (count)\nlength_max_35 (count)\nlength_max_40 (count)\nlength_max_45 (count)\neel_shark_count (count)\nnotes (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_655342/index.htmlTable https://www.bco-dmo.org/dataset/655342 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_655342.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_655342&showErrors=false&email= BCO-DMO bcodmo_dataset_655342
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_655420.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_655420 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_655420.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_655420/ public [Effect of lionfish in seagrass open area habitats] - Effect of lionfish presence on native fish abundance in open areas of seagrass habitat in Eleuthera, Bahamas during 2013 (Biodiversity Loss Effects Lionfish project) (Mechanisms and Consequences of Fish Biodiversity Loss on Atlantic Coral Reefs Caused by Invasive Pacific Lionfish) Effect of lionfish presence on native fish abundance in open areas of seagrass habitat in Eleuthera, Bahamas during 2013 (Biodiversity Loss Effects Lionfish project)\n\ncdm_data_type = Other\nVARIABLES:\nyear (unitless)\nmonth (unitless)\nvisit_number (unitless)\nday (unitless)\nreef (unitless)\ntreatment (unitless)\ntime_start (unitless)\ntime_end (unitless)\ntransect_number (unitless)\ntransect_direction (degrees)\ntransect_distance (meters)\nhabitat (unitless)\npresent (unitless)\nspecies (unitless)\nlength_max_1 (count)\nlength_max_2 (count)\nlength_max_3 (count)\nlength_max_4 (count)\nlength_max_5 (count)\nlength_max_6 (count)\nlength_max_7 (count)\nlength_max_8 (count)\nlength_max_9 (count)\nlength_max_10 (count)\nlength_max_15 (count)\nnotes (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_655420/index.htmlTable https://www.bco-dmo.org/dataset/655420 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_655420.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_655420&showErrors=false&email= BCO-DMO bcodmo_dataset_655420
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_655380.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_655380 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_655380.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_655380/ public [Effect of lionfish in seagrass satellite coral head habitats] - Effect of lionfish presence on native fish abundance on satellite coral heads in seagrass habitats on Eleuthera, Bahamas during 2013 (Biodiversity Loss Effects Lionfish project) (Mechanisms and Consequences of Fish Biodiversity Loss on Atlantic Coral Reefs Caused by Invasive Pacific Lionfish) Effect of lionfish presence on native fish abundance on satellite coral heads in seagrass habitats on Eleuthera, Bahamas during 2013 (Biodiversity Loss Effects Lionfish project)\n\ncdm_data_type = Other\nVARIABLES:\nyear (unitless)\nmonth (unitless)\nvisit_number (unitless)\nday (unitless)\ntreatment (unitless)\nreef (unitless)\nstart (unitless)\nend (unitless)\nsatellite_number (unitless)\nsatellite_distance (meters)\nsatellite_size (meters squared)\nspecies (unitless)\nlength_max_1 (count)\nlength_max_2 (count)\nlength_max_3 (count)\nlength_max_4 (count)\nlength_max_5 (count)\nlength_max_6 (count)\nlength_max_7 (count)\nlength_max_8 (count)\nlength_max_9 (count)\nlength_max_10 (count)\nlength_max_15 (count)\nlength_max_20 (count)\nlength_max_25 (count)\nlength_max_30 (count)\n... (5 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_655380/index.htmlTable https://www.bco-dmo.org/dataset/655380 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_655380.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_655380&showErrors=false&email= BCO-DMO bcodmo_dataset_655380
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_655455.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_655455 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_655455.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_655455/ public [Effect of lionfish in standardized habitat units in seagrass] - Effect of lionfish presence on native fish abundance in standardized habitat units in seagrass in Eleuthera, Bahamas during 2013 (Biodiversity Loss Effects Lionfish project) (Mechanisms and Consequences of Fish Biodiversity Loss on Atlantic Coral Reefs Caused by Invasive Pacific Lionfish) Effect of lionfish presence on native fish abundance in standardized habitat units in seagrass in Eleuthera, Bahamas during 2013 (Biodiversity Loss Effects Lionfish project)\n\ncdm_data_type = Other\nVARIABLES:\nyear (unitless)\nsurvey_type (unitless)\nmonth (unitless)\nvisit_number (unitless)\nday (unitless)\ntreatment (unitless)\nreef (unitless)\ntime_start (unitless)\ntime_end (unitless)\nshu_row (unitless)\ndistance (meters)\npresence (unitless)\nspecies (unitless)\nlength_max_1 (count)\nlength_max_2 (count)\nlength_max_3 (count)\nlength_max_4 (count)\nlength_max_5 (count)\nlength_max_6 (count)\nlength_max_7 (count)\nlength_max_8 (count)\nlength_max_9 (count)\nlength_max_10 (count)\nlength_max_15 (count)\nnotes (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_655455/index.htmlTable https://www.bco-dmo.org/dataset/655455 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_655455.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_655455&showErrors=false&email= BCO-DMO bcodmo_dataset_655455
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_683186 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_683186.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_683186/ public [Egg sizes and macromere allocation] - Egg sizes and macromere allocation for diverse annelids and molluscs (Feeding by the ciliated larvae of marine invertebrates: effects of diverse particle capture mechanisms on feeding performance) Egg sizes and macromere allocation for annelids and molluscs used in a comparative analysis of allocation of cytoplasm to macromeres. Many of these data were obtained from the literature, but some were obtained directly by the authors.\n\ncdm_data_type = Other\nVARIABLES:\ntaxon (unitless)\nspecies (unitless)\nnutrition (unitless)\ntaxa (unitless)\negg_diameter (micrometers (um))\negg_volume (cubic micrometer (um3))\nallocation (unitless)\nalloc_pcnt (unitless)\nlog_egg_diameter (micrometers (um))\nlog_egg_volume (cubic micrometer (um3))\nlogit_allocation (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_683186/index.htmlTable https://www.bco-dmo.org/dataset/683186 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_683186.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_683186&showErrors=false&email= BCO-DMO bcodmo_dataset_683186
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_728110 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_728110/ public [Epibenthic community taxonomy] - Table of taxonomic hierarchy and the sampling method for organisms collection in Aleutian Island kelp forests, June 2016 and July 2017 (Kelp Forest Ecosystem Engineer Loss project) (Collaborative Research: Changes in ecosystem production and benthic biodiversity following the widespread loss of an ecosystem engineer) This dataset includes the taxonomic hierarchy for epibenthic community organisms collected in Aleutian Island kelp forests, based on biomass data. It also lists the method used to sample, either by a scrape collection or by a visual count along a swath.\n\ncdm_data_type = Other\nVARIABLES:\nTaxon (unitless)\nKingdom (unitless)\nPhylum (unitless)\nClass (unitless)\nOrder_Subclass (unitless)\nFamily (unitless)\nGenus (unitless)\nSpecies (unitless)\nSampling_method (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_728110/index.htmlTable https://www.bco-dmo.org/dataset/728110 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_728110.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_728110&showErrors=false&email= BCO-DMO bcodmo_dataset_728110
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_662377 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_662377.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_662377/ public [Eunicea flexuosa interactions] - Data from surveys of Eunicea flexusa colonies on St. John, VI National Park from 2014. (LTREB Long-term coral reef community dynamics in St. John, USVI: 1987-2019) Data from surveys of Eunicea flexusa colonies on St. John, VI National Park from 2014.\n\ncdm_data_type = Other\nVARIABLES:\nlocation (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nspecies (unitless)\ndate (unitless)\nheight (centimeters)\nwidth (centimeters)\ndepth (m)\ncolonyEffect_0 (Colony Effect 0, unitless)\ncolonyEffect_1 (Colony Effect 1, unitless)\ncolonyEffect_2 (Colony Effect 2, unitless)\ncolonyEffect_3 (Colony Effect 3, unitless)\ncolonyEffect_4 (Colony Effect 4, unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_662377_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_662377/index.htmlTable https://www.bco-dmo.org/dataset/662377 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_662377.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_662377&showErrors=false&email= BCO-DMO bcodmo_dataset_662377
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_779387.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_779387 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_779387.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_779387/ public [Experiment Metrics] - Experiment details for invertebrate larvae electrophysiology (Vision-mediated influence of low oxygen on the physiology and ecology  of marine larvae) Experiment Details for invertebrate larvae electrophysiology\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\nExperiment_Name (unitless)\nNormoxia_Time (minute (min))\nO2_Decay (minute (min))\nNormoxia_O2 (micromole per liter (umol/L))\nLow_O2 (micromole per liter (umol/L))\nO2_Change (micromole per liter (umol/L))\nO2_Change_Time (micromole per liter per minute (umol/l per min))\nLow_O2_Min (minute (min))\nTotal_Exp_Time (hour (hr))\npH (unitless)\nTemp_Max (degrees Celsius (C)\nTemp_Min (degrees Celsius (C)\nTemp_Avg (degrees Celsius (C)\nStimulus_Irradiance (mol photons per second and square meter (mol m-2s-1))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_779387/index.htmlTable https://www.bco-dmo.org/dataset/779387 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_779387.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_779387&showErrors=false&email= BCO-DMO bcodmo_dataset_779387
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3915.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3915 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3915.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3915/ public [fairy basslet counts post-invasion] - Results of fairy basslet (Gramma loreto) surveys on historically monitored ledges near Lee Stocking Island, Bahamas following invasion by red lionfish (Pterois volitans), 2009-2012 (Lionfish Invasion project) (Ecological Release and Resistance at Sea: Invasion of Atlantic Coral Reefs by Pacific Lionfish) Results of fairy basslet (Gramma loreto) surveys on historically monitored ledges near Lee Stocking Island, Bahamas following invasion by red lionfish (Pterois volitans), 2009-2012.\n\ncdm_data_type = Other\nVARIABLES:\nsite (text)\nlat_site (decimal degrees)\nlon_site (Longitude, decimal degrees)\nlocation (text)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndate (unitless)\nmonth (mm (01 to 12))\nday (dd (01 to 31))\nyear (unitless)\nledge_tag_orig (dimensionless)\nledge_tag_new (dimensionless)\nspecies (text)\nspecies_code (code)\ncount_total (integer)\nnotes (text)\nlenbin_min (cm)\nlenbin_max (cm)\nnum_fish_len (integer)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_3915_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3915/index.htmlTable https://www.bco-dmo.org/dataset/3915 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3915.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3915&showErrors=false&email= BCO-DMO bcodmo_dataset_3915
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_719379.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_719379 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_719379.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_719379/ public [Fatty acid profiles] - Fatty acid profiles of M. menidia females and their unfertilized eggs. (Collaborative research: Understanding the effects of acidification and hypoxia within and across generations in a coastal marine fish) Gas chromatography was used to quantify the absolute (mg g dry weight-1) and\nrelative concentrations (% of total) of 27 FAs for each of 5 females (whole\nindividual) and their unfertilized eggs (~ 1 ml). Samples were first dried and\nthen homogenized in a solution of chloroform-methanol (2:1 v/v) and\ntricosanoic acid (23:0) as an internal standard for quantification of mg\ng\\u22121\\u00a0dry mass of fatty acids. Lipids were cold-extracted from\napproximately 50 mg of dry mass. A Shimadzu GC-2014 gas chromatograph set with\na Phenomenex ZB-WAX plus capillary column (30\\u00a0m long; 0.53 mm ID; 1.0 um\nthick) was used to quantify FAs, and individual FAs were identified by\ncomparison to commercial standards (Supelco, Inc).\\u00a0\n \nThese data are\\u00a0associated with the corresponding paper:\n \n[Snyder, J.T.*, Murray, C.S.*, and Baumann, H. (2017) Potential for maternal\neffects on offspring CO2-sensitivities in a coastal marine fish. Journal of\nExperimental Marine Biology and Ecology (in\npress).](\\\\https://doi.org/10.1016/j.jembe.2017.11.002\\\\)\n \nOther datasets related to this paper:\n \n[Survival, length, and growth responses of M. menidia offspring from different\nfemales exposed to contrasting CO2 environments.](\\\\https://www.bco-\ndmo.org/dataset/719420\\\\)\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\nCollection_site (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nCollection_date (unitless)\n... (6 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_719379_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_719379/index.htmlTable https://www.bco-dmo.org/dataset/719379 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_719379.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_719379&showErrors=false&email= BCO-DMO bcodmo_dataset_719379
log in [Field measurements of periostracum cover from focal population] - Field measurements of periostracum cover of mussels (Mytilus californianus) from focal population at Marshall Gulch Beach, CA in July and August 2022 (Invertebrate calcification and behavior in seawater of decoupled carbonate chemistry) These data build off of experimental incubations described in Dataset 1 and 2. To contextualize laboratory incubations, we measured periostracum cover of live California mussels from multiple microhabitats (relative tidal height and degree of sun exposure) in our focal sample population. This dataset represents periostracum cover measurements of California Mussels, Mytilus californianus, conducted at Marshall Gulch Beach, CA in July and August 2022.\n\nDataset 1: Lab incubations of mussels (Mytilus californianus) examining the influence of periostracum cover and pH on external shell dissolution at Marshall Gulch Beach, CA from August 2021 to March 2022 (see BCO-DMO related dataset)\n\nDataset 2: Lab incubations of mussels (Mytilus californianus) examining the influence of periostracum cover and pH on external shell dissolution at Marshall Gulch Beach, CA from August 2021 to March 2022 (see BCO-DMO related dataset)\n\ncdm_data_type = Other\nVARIABLES:\nID (unitless)\nspecies (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndate_start (unitless)\ndate_end (unitless)\nlight (unitless)\nheight (unitless)\nperi_percent (percentage (%))\nshell_L_avg (milimeter (mm))\nshell_A_avg (milimeters squared (mm^2))\n BCO-DMO bcodmo_dataset_935484_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_778426.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_778426 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_778426.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_778426/ public [Final spores] - Pterosiphonia bipinnata and Corallina vancouveriensis final experiment shear and percent remaining at Deadman Bay on San Juan Island, Washington (Effects of Ocean Acidification on Coastal Organisms: An Ecomaterials Perspective) Pterosiphonia bipinnata and Corallina vancouveriensis final experiment shear and percent remaining at Deadman Bay on San Juan Island, Washington\n\ncdm_data_type = Other\nVARIABLES:\nTreatment (unitless)\nShear (Pascals (Pa))\nPercentRemaining (Percent Remaining, unitless)\nSpecies (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nlocation (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_778426_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_778426/index.htmlTable https://www.bco-dmo.org/dataset/778426 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_778426.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_778426&showErrors=false&email= BCO-DMO bcodmo_dataset_778426
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_916418_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_916418_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_916418_v1/ public [Fish collection locations] - Collection locations, dates, and weight and length measurements of individuals of three fish species from the Matagorda Bay region of Texas in the northwestern Gulf of Mexico from 2021 to 2023 (Collaborative Research: Shifting the Hypoxia Paradigm – New Directions to Explore the Spread and Impacts of Ocean/Great Lakes Deoxygenation) This dataset describes the collection locations of individuals of three fish species (Red Drum Sciaenops ocellatus, Southern Flounder Paralichthys lethostigma, and Atlantic Croaker Micropogonias undulatus) in the Matagorda Bay region of Texas in the northwestern Gulf of Mexico. Fish carcasses were obtained from anglers at boat docks, fish cleaning stations, or other locations in the region. Fish were also obtained from bait shops where the proprietors verified the fish were sourced from the Matagorda Bay study region. These fish will be dissected to subsample muscle tissue, eye lenses, and otoliths for chemical analysis to reconstruct environmental histories (trace element proxies for hypoxia, salinity, and other parameters), mercury concentrations, and stable isotopes to reconstruct food web interactions.\n\ncdm_data_type = Other\nVARIABLES:\nFishID (unitless)\nStation_Name (unitless)\nStation_Latitude (degrees_north)\nlongitude (Station_longitude, degrees_east)\nDate_Collected (unitless)\nSpecies (unitless)\nWeight_g (grams (g))\nLength_mm (millimeters (mm))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_916418_v1/index.htmlTable https://www.bco-dmo.org/dataset/916418 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_916418_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_916418_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_916418_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_684177 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_684177.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_684177/ public [Fish count data] - Fish count data from the Caroline Islands and the Federal States of Micronesia collected from 2012-2014. (The impact of a large episodic disturbance on an invasive (outbreak) coral: Will Typhoon Maysak promote or suppress an invasive Montipora sp. Coral on reefs of Ulithi Atoll, Federated States of Micronesia?) Fish count data from the Caroline Islands and the Federal States of Micronesia collected from 2012-2014.\n\ncdm_data_type = Other\nVARIABLES:\nspecies (unitless)\nsite (unitless)\ndate (unitless)\ntime2 (Time, unitless)\ntransect (unitless)\ntransect_width (meters)\ntype (unitless)\nmorph (unitless)\nphase (unitless)\nsize (mm)\ncount (count)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_684177/index.htmlTable https://www.bco-dmo.org/dataset/684177 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_684177.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_684177&showErrors=false&email= BCO-DMO bcodmo_dataset_684177
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_922228_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_922228_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_922228_v1/ public [Fish Data] - Fish data from fish and seagrass surveys on clusters of artificial reefs at the Abaco Islands, Bahamas in 2022 (Using novel ecosystem-scale experiments to quantify drivers of reef productivity in a heavily impacted coastal ecosystem) Fish data from fish and seagrass surveys on clusters of artificial reefs at the Abaco Islands, Bahamas in May of 2022. Data are presented for site PN, which was constructed in May 2021 at the Bight of Old Robinson, Great Abaco. At the site three clusters of nine reefs were constructed. Each cluster was separated by at least 150 m and were constructed at ~3 m depth.\n\ncdm_data_type = Other\nVARIABLES:\nObserver (unitless)\nDate (unitless)\ntime_local (Time, unitless)\nAssembly_day (unitless)\nCluster (unitless)\ncluster_lat (degrees_north)\nlongitude (Cluster_lon, degrees_east)\nReef (unitless)\nSpecies (unitless)\nCount (unitless)\nTotal_length (centimeters (cm))\nTransient (unitless)\nFloy_tag (unitless)\nFloy_color (unitless)\nFloy_size (unitless)\nFloy_date (unitless)\nFloy_ID (unitless)\nNotes (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_922228_v1/index.htmlTable https://www.bco-dmo.org/dataset/922228 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_922228_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_922228_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_922228_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_709963 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_709963.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_709963/ public [Fish roadside surveys 2014-2015] - Weekly survey of fish sold by the roadside in Moorea, French Polynesia in 2014 and 2015 (Coral reef fishery project) (Adaptive Capacity, Resilience, and Coral Reef State Shifts in Social-ecological Systems) Weekly survey of fish sold by the roadside in Moorea, French Polynesia in 2014 and 2015 (Coral reef fishery project)\n\ncdm_data_type = Other\nVARIABLES:\nlocation_caught (unitless)\nlocation_sold (unitless)\ngenus (unitless)\nspecies (unitless)\nsurvey_event (unitless)\ndate (unitless)\nlength (centimeters)\nhabitat_caught (unitless)\ngear_1 (unitless)\ngear_2 (unitless)\ngear_3 (unitless)\nboat_type (unitless)\nmotor (unitless)\ncrew (unitless)\ndeparture_time (unitless)\nhours_fishing (hours)\nis_seller_the_fisher (unitless)\ngender (unitless)\naverage_fishing_days_per_week (days)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_709963/index.htmlTable https://www.bco-dmo.org/dataset/709963 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_709963.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_709963&showErrors=false&email= BCO-DMO bcodmo_dataset_709963
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_516234 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_516234.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_516234/ public [fish species counts] - Fish species counts in 3, 20x40 m transects, Panama, 1980-2010 (EPac Corals projects I-VII) (Ecological Effects of the 1982/83 El Nino-Associated Disturbance to Eastern Pacific Coral Reefs) This dataset present fish species counts in three 20x40 m transects. The surveys were conducted at the Uva Island coral reef (7o48\\u201946\\u201dN, 81o45\\u201935\\u201dW), Gulf of Chiriqu\\u00ed, Panama from 1980 to 2010 during both the wet and dry seasons.\n\ncdm_data_type = Other\nVARIABLES:\nyear (unitless)\ntransect (integer)\nlatitude (degrees_north)\nlongitude (degrees_east)\nlat_outer (Latitude, decimal degrees)\nlon_outer (decimal degrees)\nday (DD)\nmonth (MM)\nseason (unitless)\ntime_start (HHmm)\ntime_end (HHmm)\nspecies_code (unitless)\nspecies (unitless)\ncount (integer)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_516234_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_516234/index.htmlTable https://www.bco-dmo.org/dataset/516234 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_516234.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_516234&showErrors=false&email= BCO-DMO bcodmo_dataset_516234
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_700226.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_700226 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_700226.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_700226/ public [Fish species survey] - Fish species survey from the Bahamas from 2009-2012. (Mechanisms and Consequences of Fish Biodiversity Loss on Atlantic Coral Reefs Caused by Invasive Pacific Lionfish) Fish species survey from the Bahamas from 2009-2012.\n\ncdm_data_type = Other\nVARIABLES:\nyear (unitless)\nfamily (unitless)\nsite (unitless)\nsite_treatment (unitless)\ntime2 (Time, unitless)\nsite_pair (unitless)\nsample_type (unitless)\nsubsample_ID (unitless)\nspecies (unitless)\nsize_1 (count)\nsize_2 (count)\nsize_3 (count)\nsize_4 (count)\nsize_5 (count)\nsize_6 (count)\nsize_15 (count)\nsize_20 (count)\nsize_25 (count)\nsize_30 (count)\nsize_35 (count)\nsize_40 (count)\nsize_45 (count)\nsize_50 (count)\nsize_100 (count)\nsize_150 (count)\nsize_200 (count)\nsize_250 (count)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_700226/index.htmlTable https://www.bco-dmo.org/dataset/700226 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_700226.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_700226&showErrors=false&email= BCO-DMO bcodmo_dataset_700226
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2860 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2860.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_2860/ public [fish_abund] - Fish abundance data from MOC-10 trawls from the ARSV Laurence M. Gould, RVIB Nathaniel B. Palmer LMG0104, NBP0104, LMG0203, NBP0204 from the Southern Ocean, 2001-2002 (SOGLOBEC project) (U.S. GLOBEC Southern Ocean) Fish abundance data from MOC-10 trawls from the ARSV Laurence M. Gould, RVIB Nathaniel B. Palmer LMG0104, NBP0104, LMG0203, NBP0204 from the Southern Ocean, 2001-2002 (SOGLOBEC project)\n\ncdm_data_type = Other\nVARIABLES:\ncruiseid\nyear (unitless)\nstation\ntow\nyrday_gmt\nmonth_gmt\nday_gmt\ntime_start (HHmm)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndepth_w (Depth, meters)\nnet\ndepth_range (Depth, meters)\ndepth_open (Depth, meters)\ndepth (m)\nvol_filt (meters3)\nfamily\nspecies\ndate_gmt (unitless)\ntime_local (unitless)\ncount\nabund_integ (#/m2)\nbiomass (grams 104m-3)\nbiomass_integ (grams/m2)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_2860_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_2860/index.htmlTable https://www.bco-dmo.org/dataset/2860 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_2860.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_2860&showErrors=false&email= BCO-DMO bcodmo_dataset_2860
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_734706 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_734706.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_734706/ public [Florida Keys coral growth] - Annual growth chronologies of Siderastrea siderea and Pseudodiploria strigosa on the Florida Keys Reef Tract, 2015-2016 (Investigating the influence of thermal history on coral growth response to recent and predicted end-of-century ocean warming across a cascade of ecological scales) This dataset includes annual measurements of extension, density, and calcification for 39 Siderastrea siderea cores and 31 Pseudodiploria strigosa cores from inner and outer reef sites spanning ~200 km of the Florida Keys Reef Tract.\n\ncdm_data_type = Other\nVARIABLES:\nspecies (unitless)\nreefZone (Reef Zone, unitless)\ntransect (unitless)\nsite (unitless)\ncoreID (Core ID, unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nyear (unitless)\nlinext (centimeters/year (cm/yr))\ndensity (grams/centimeter^3 (g/cm3))\ncalc (grams/centimeter^2/year (g/cm2/yr))\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_734706_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_734706/index.htmlTable https://www.bco-dmo.org/dataset/734706 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_734706.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_734706&showErrors=false&email= BCO-DMO bcodmo_dataset_734706
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_700177 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_700177.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_700177/ public [Grazing assays] - Grazing preferences by herbivorous fishes in The Bahamas in 2011 (Mechanisms and Consequences of Fish Biodiversity Loss on Atlantic Coral Reefs Caused by Invasive Pacific Lionfish) Grazing preferences by herbivorous fishes in The Bahamas in 2011\n\ncdm_data_type = Other\nVARIABLES:\ndate (unitless)\nsite (unitless)\nsite_treatment (unitless)\nreplicate_number (unitless)\nreplicate_pair (unitless)\nobservation_time (minutes)\nmicro_treatment (unitless)\nalgae_initial (centimeters squared)\nalgae_pcntCoverChange (Algae Pcnt Cover Change, percent)\nfamily (unitless)\nspecies (unitless)\nfish_size (centimeters)\nbite_number (count)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_700177/index.htmlTable https://www.bco-dmo.org/dataset/700177 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_700177.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_700177&showErrors=false&email= BCO-DMO bcodmo_dataset_700177
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_511526 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_511526.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_511526/ public [growth phase exopolymers] - Experimental results: Exopolymer and carbohydrate production by diatoms with growth; conducted at the Thornton lab, TAMU from 2007-2012 (Diatom EPS Production project) (Effect of Temperature on Extracellular Polymeric Substance Production (EPS) by Diatoms) Data from laboratory experiment on exopolymer and carbohydrate production by\nthe diatoms Thalassiosira weissflogii (CCMP 1051), Skeletonema marinoi (CCMP\n1332), and Cylindrotheca closterium (CCMP 339) during the growth to death\nphases of the cultures.\n \nRelated references:  \n Chen, J. 2014. Factors affecting carbohydrate production and the formation\nof transparent exopolymer particles (TEP) by diatoms. Ph.D. dissertation,\nTexas A&M University, College Station, TX.\n\ncdm_data_type = Other\nVARIABLES:\nspecies (dimensionless)\ngrowth_phase (dimensionless)\nday (dimensionless)\nculture (dimensionless)\ncell_abundance (cells per milliliter (mL-1))\ncell_vol_mean (cubic micrometers (um^3))\nchla (Concentration Of Chlorophyll In Sea Water, micrograms per liter (ug L-1))\nchla_per_cell (Concentration Of Chlorophyll In Sea Water, picograms per cell (pg cell-1))\nchla_per_cell_vol (Concentration Of Chlorophyll In Sea Water, femtograms per cubic micrometer (fg um-3))\ntot_carb (micrograms per milliliter (ug mL-1))\ntot_carb_per_cell (picograms per cell (pg cell-1))\ntot_carb_per_cell_vol (femtograms per cubic micrometer (fg um-3))\ncolloidal_carb (micrograms per milliliter (ug mL-1))\ncollodial_per_cell (picograms per cell (pg cell-1))\ncolloidal_per_cell_vol (femtograms per cubic micrometer (fg um-3))\nEPS_carb (micrograms per milliliter (ug mL-1))\nEPS_carb_per_cell (picograms per cell (pg cell-1))\nEPS_carb_per_cell_vol (femtograms per cubic micrometer (fg um-3))\nHW_carb (micrograms per milliliter (ug mL-1))\n... (21 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_511526/index.htmlTable https://www.bco-dmo.org/dataset/511526 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_511526.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_511526&showErrors=false&email= BCO-DMO bcodmo_dataset_511526
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_775500 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_775500.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_775500/ public [GSC urchin grazing] - Experiment testing the temperature dependence of urchin grazing at the Galapagos Science Center on San Cristobal Island from February to March 2018 (The Role of Temperature in Regulating Herbivory and Algal Biomass in Upwelling Systems) This study was conducted from February to March 2018 at the Galapagos Science Center on San Cristobal Island. The rate of Ulva sp. consumption by the two sea urchins, Lytechinus semituberculatus and Eucidaris galapagensis was measured at 10 temperatures: 14\\u00b0, 16\\u00b0, 18\\u00b0, 20\\u00b0, 22\\u00b0, 24\\u00b0, 26\\u00b0, 28\\u00b0, 30\\u00b0, 32\\u00b0C. L. semituberculatus (green urchin), E. galapaguensis (pencil urchin) and T. depressus (white urchin) are the three most common species in the Galapagos Islands and together make up 91% of the sea urchin biomass.  Ulva sp. was used as the prey item because it is one of the most abundant macroalgal species, together with turf, encrusting coralline algae and Sargassum near the Galapagos and coast and because it is highly palatable for herbivores.\n\ncdm_data_type = Other\nVARIABLES:\nMesocosm (unitless)\nSpecies (unitless)\nTemperature (degrees Celsius)\nGrazing (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_775500/index.htmlTable https://www.bco-dmo.org/dataset/775500 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_775500.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_775500&showErrors=false&email= BCO-DMO bcodmo_dataset_775500
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_908689_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_908689_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_908689_v1/ public [Gulf of Alaska copepods: annotated transcriptomes] - Annotated de novo transcriptomes generated from six co-occurring species of calanoid copepods from the R/V Tiglax TXF18, TXS19, TXF15, TXF17 in the Gulf of Alaska from 2015-2019 (Collaborative Proposal: Optimizing Recruitment of Neocalanus copepods through Strategic Timing of Reproduction and Growth in the Gulf of Alaska) The dataset includes the annotation files of nine high-quality de novo transcriptomes generated from shotgun assemblies of short-sequence reads. The species are ecologically-important members of sub-arctic North Pacific marine zooplankton communities. The de novo assemblies included one generated several years ago plus eight new ones generated from six co-occurring species of calanoid copepods in the Gulf of Alaska. The transcriptomes include the first published ones for Neocalanus plumchrus, Neocalanus cristatus, Eucalanus bungii and Metridia pacifica and three for Neocalanus flemingeri and two for Calanus marshallae. Total RNA from single individuals was used to construct gene libraries that were sequenced on an Illumina Next-Seq platform. Short-sequence reads were assembled with Trinity software and resulting transcripts were annotated using the SwissProt database with additional functional annotation using gene ontology terms and enzyme function. The annotations files are the first ones published for these species. The integrated dataset can be used for quantitative inter- and intra-species comparisons of gene expression patterns across biological processes using the annotations.\n\nThese data are further described in the following publications: Hartline, et al. (2023) (DOI: 10.1038/s41597-023-02130-1), Roncalli, et al. (2022) (DOI: 10.1111/mec.16354), and Roncalli, et al. (2019) (DOI: 10.1038/s42003-019-0565-5)\n\ncdm_data_type = Other\nVARIABLES:\nseq_id (unitless)\nGenbank_accession (unitless)\nSpecies (unitless)\nStation (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nCollection_date (unitless)\nDepth_range (meters (m))\nLife_stage (unitless)\nSex (unitless)\nEntry (unitless)\n... (20 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_908689_v1_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_908689_v1_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_908689_v1/index.htmlTable https://www.bco-dmo.org/dataset/908689 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_908689_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_908689_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_908689_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_712803 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_712803.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_712803/ public [Halomethane concentrations in cell culture] - Halomethane concentrations in cell culture (The role of organic and metal cofactors on the biogenic synthesis of halogenated volatile hydrocarbons) Halomethane concentrations in cell culture\n\ncdm_data_type = Other\nVARIABLES:\nStrain (unitless)\nSpecies (unitless)\nClade (unitless)\nTime_elapsed_hours (hours)\ncells_per_ml (cells per milliliter)\nCH3Br (CH3 BR, picomoles per liter)\nCH3I (CH3 I, picomoles per liter)\nCH3Cl (CH3 CL, picomoles per liter)\nCHBr3 (picomoles per liter)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_712803/index.htmlTable https://www.bco-dmo.org/dataset/712803 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_712803.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_712803&showErrors=false&email= BCO-DMO bcodmo_dataset_712803
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_817298 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_817298.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_817298/ public [Hurricane Harvey Coral Gene Expression] - Coral gene expression Sequence Read Archive (SRA) accession numbers and information for samples collected at the Flower Garden Banks National Marine Sanctuary in the Gulf of Mexico in September and October of 2017 to capture effects of Hurricane Harvey (RAPID: Collaborative Research: Impact of freshwater runoff from Hurricane Harvey on coral reef benthic organisms and associated microbial communities) To capture the immediate effects of storm-driven freshwater runoff on coral and symbiont physiology, we leveraged the heavy rainfall associated with Hurricane Harvey in late August 2017 by sampling FGB coral gene expression at two time points: September 2017, when surface water salinity was reduced (\\u223c34 ppt); and 1 month later when salinity had returned to typical levels (\\u223c36 ppt in October 2017). \\r\\n\\r\\nThis dataset includes Sequence Read Archive (SRA) and BioSample accessions under BioProject PRJNA552981 at The National Center for Biotechnology Information.  It also contains sample information and species names for samples collected the east and west banks of the Flower Garden Banks National Marine Sanctuary (FGBNMS) at 80ft.\\r\\n\\r\\nThese data were published in Wright et al. (2019).\n\ncdm_data_type = Other\nVARIABLES:\nSample_Name (unitless)\ntime2 (Time, unitless)\nBank (unitless)\nBuoy (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nSpecies (unitless)\ndepth (m)\nSRA (unitless)\nAccession (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_817298_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_817298/index.htmlTable https://www.bco-dmo.org/dataset/817298 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_817298.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_817298&showErrors=false&email= BCO-DMO bcodmo_dataset_817298
log in [Identity and Heights of Octocoral Species] - Identity and heights of Octocoral species found on transects at 6 sites on the south shore of St John, U.S. Virgin Islands in 2021 and 2022 (Collaborative Research: Pattern and process in the abundance and recruitment of Caribbean octocorals) Transect surveys were conducted at 6 sites on the south shore of St John, within the U.S. Virgin Islands National Park during the summers of 2021 and 2022.  Depending on the site, 3 to 6 transects were established.  Identity and heights of all arborescent octocorals greater than or equal to 5 centimeters were recorded from 1 square meter quadrats on the transects.  The position of colonies relative to the site, meter on the transect, and side of the quadrat are included.   Surveys were conducted by Drs. Howard Lasker and Christopher Wells of the University at Buffalo.\n\ncdm_data_type = Other\nVARIABLES:\nCensus_Year (unitless)\nDate (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nSite (unitless)\nTransect_Position (unitless)\nMeter_on_transect (meters)\nSide_of_transect (unitless)\nMeter_Side (unitless)\nGenus (unitless)\nSpecies (unitless)\nSpecies_code (unitless)\nTotal_height (centimeters (cm))\nHeight_of_living_tissue (centimeters (cm))\nBasal_damage (centimeters (cm))\nDamage (unitless)\nCyphoma_present (unitless)\nComments (unitless)\n BCO-DMO bcodmo_dataset_893615_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_925598_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_925598_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_925598_v1/ public [Incubation data for Mytilus californianus calcification] - Incubation data for Mytilus californianus calcification from January to April 2022 (OA decoupling project) (Invertebrate calcification and behavior in seawater of decoupled carbonate chemistry) Calcification is vital to marine organisms that produce calcium carbonate shells and skeletons. However, how calcification is impacted by ongoing environmental changes, including ocean acidification, remains incompletely understood due to complex relationships among the carbonate system variables hypothesized to drive calcification. \n\nHere, we experimentally decouple these drivers in an exploration of shell formation in adult marine mussels, Mytilus californianus. In contrast to models that focus on single parameters like calcium carbonate saturation state, our results implicate two independent factors, bicarbonate concentration and seawater pH, in governing calcification. While qualitatively similar to ideas embodied in the related substrate-inhibitor ratio (bicarbonate divided by hydrogen ion concentration), our data highlight that merging bicarbonate ion and hydrogen ion concentrations into a simple quotient obscures important features of calcification. Considering a dual-parameter framework improves mechanistic understanding of how calcifiers interact with complex and changing chemical conditions.\n\ncdm_data_type = Other\nVARIABLES:\nspecies (unitless)\nAphiaID (unitless)\nLSID (unitless)\nmodule (unitless)\ndate_local (unitless)\nstart_datetime_local (unitless)\nISO_Start_DateTime_UTC (unitless)\nduration (hours)\nsalinity (PSU)\ntemperature (degrees Celcius (c))\ncalcification (umol hr^-1 g^-0.71592)\ntissue_mass (grams (g))\nshell_mass (grams (g))\nwet_mass (grams (g))\n... (24 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_925598_v1/index.htmlTable https://www.bco-dmo.org/dataset/925598 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_925598_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_925598_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_925598_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_710033.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_710033 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_710033.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_710033/ public [Initial spores] - Pterosiphonia bipinnata and Corallina vancouveriensis initial experiment attachment and duration at Deadman Bay on San Juan Island, Washington (Effects of Ocean Acidification on Coastal Organisms: An Ecomaterials Perspective) Pterosiphonia bipinnata and Corallina vancouveriensis initial experiment attachment and duration at Deadman Bay on San Juan Island, Washington\n\ncdm_data_type = Other\nVARIABLES:\ntime2 (Time, hours)\nAttached (unitless)\nTreatment (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nlocation (unitless)\nSpecies (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_710033_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_710033/index.htmlTable https://www.bco-dmo.org/dataset/710033 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_710033.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_710033&showErrors=false&email= BCO-DMO bcodmo_dataset_710033
log in [Integrated Energy Density data of Marine and Freshwater Organisms] - Marine and Freshwater Energy Density Data Integrated and Organized by Taxonomy from Previous Research Sources (1961 through June 2024) Discovered by a Literature Review (Nutritional ecology of climate change: Impacts on Northwest Atlantic fishes) Energy is the currency of exchange within ecosystems which defines the strength and influence of interactions, particularly between predator and prey. The ability to estimate the productivity of an ecosystem is, therefore, dependent upon the estimation of consumer diet contents and their energetic quality. To estimate growth, reproduction, and, ultimately, survival of individuals, measures of prey quality for predators are essential both at the individual level and for scaling to ecosystem-wide fluxes and pools. Among measures of prey quality, energy density (kiloJoules per gram; kJ/g) is the most used in ecology. Considerable efforts have established estimates of energy densities for many aquatic taxa. However, a database of aquatic organism energetics constructed by integrating and organizing across multiple sources spawning marine and freshwater habitats across the globe is needed to add both depth (more samples to measure within-taxa variation) and breadth (more taxa). To generate a comprehensive energy density database of aquatic organisms, we performed a multifaceted review to find sources from the peer-reviewed and grey literature with a broad search on Web of Science, from citations of related literature, and a haphazard recommendation from experts. Estimates of energy density of whole organism live weights (kJ/g wet weight) were prioritized to better relate to diet and energetics studies. When energy density was only provided per gram dry weight, the dry weight and percentage water was used to calculate energy density per gram wet weight. Sub-organism (i.e. tissue specific) energy density estimates are included (e.g. muscle, liver, egg) when only these were reported. A total of 3810 records are included from 134 sources, covering 2016 unique taxa, of which 1771 (87.76%) are identified at the species level. Species or taxa-specific energy densities ranged from 0.015 to 17.949 kJ/g wet weight (WW) with a mean ± SD = 4.509 ± 1.94 kJ/g WW and median = 4.225 kJ/g WW. Among those phyla with more than three species (n phyla = 9), chordates (n taxa = 1283) had the highest average energy density (mean ± SD; 4.92 ± 1.90; 0.162 – 17.9 kJ/g WW) and ctenophores (n taxa = 4) had the lowest average (0.0988 ± 0.074; 0.03 to 0.205 kJ/g WW). Each record includes the organism taxonomy to the lowest resolution listed in the original source, energetic data available from the source including body composition and energy density data, number of replicates and methodology for measuring energetics information--primarily split between bomb calorimetry and proximate composition--as well as the source's author(s), year, and publication. Additional meta-data are included whenever possible based on details from the original source including the 1) environmental features: area, method, and timing of capture; 2) methodological features: storage method, storage duration, and tissue type measured; and 3) organismal features: weight, length, and sex; as well as any additional notes about the source. This comprehensive database integrates those data discoverable by our search and which met inclusion criteria identified above in a taxonomic and spatial organization framework to facilitate modeling trophic interactions, bioenergetics, growth, productivity, and energy fluxes through marine and freshwater ecosystems.\n\ncdm_data_type = Other\nVARIABLES:\nPhylum (unitless)\n... (41 more variables)\n BCO-DMO bcodmo_dataset_948253_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_922236_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_922236_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_922236_v1/ public [Invertebrate Data] - Invertebrate data from fish and seagrass surveys on clusters of artificial reefs at the Abaco Islands, Bahamas in 2021 and 2022 (Using novel ecosystem-scale experiments to quantify drivers of reef productivity in a heavily impacted coastal ecosystem) Invertebrate data from fish and seagrass surveys on clusters of artificial reefs at the Abaco Islands, Bahamas in May of 2022. Data are presented for site PN, which was constructed in May 2021 at the Bight of Old Robinson, Great Abaco. At the site three clusters of nine reefs were constructed. Each cluster was separated by at least 150 m and were constructed at ~3 m depth.\n\ncdm_data_type = Other\nVARIABLES:\nObserver (unitless)\nDate (unitless)\ntime_local (Time, unitless)\nAssembly_day (unitless)\nCluster (unitless)\ncluster_lat (degrees_north)\nlongitude (Cluster_lon, degrees_east)\nReef (unitless)\nSpecies (unitless)\nCount (unitless)\nLegal (unitless)\nNot_legal (unitless)\nNotes (unitless)\ntime (Iso_datetime_utc, seconds since 1970-01-01T00:00:00Z)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_922236_v1/index.htmlTable https://www.bco-dmo.org/dataset/922236 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_922236_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_922236_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_922236_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_897895_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_897895_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_897895_v1/ public [Juvenile Black sea bass winter growth and lipid accumulation under varying food and temperature conditions - Experiment 1] - Winter growth and lipid accumulation in juvenile Black sea bass exposed to varying food and temperature conditions during lab experiments conducted from September 2021 to April 2022 at UConn Avery Point (Collaborative research: Understanding the effects of acidification and hypoxia within and across generations in a coastal marine fish) The northern stock of Black sea bass (BSB, Centropristis striata) has greatly expanded over the past decade, potentially due to warming Northwest Atlantic shelf waters affecting overwintering especially in juveniles. To gather better empirical data we quantified winter growth and lipid accumulation in BSB juveniles from Long Island Sound using two complementing experiments. The data from Experiment 1 are presented here.\n\nExperiment 1 measured individual length growth (GR), weight-specific growth (SGR), growth efficiency, and lipid content at constant food and three static temperatures: 6°, 12°, and 19° Celsius (C). Average GR (SGR) decreased from 0.24 millimeters per day (mm d-1) at 19°C (0.89% d-1) to 0.15 mm d-1 at 12°C (0.54% d-1) to 0.04 mm d-1 at 6°C (0.17% d-1). Even at the coldest temperature, most juveniles sustained positive GRs and SGRs; hence, the species' true thermal growth minimum may be below 6°C. However, lipid accumulation was greatest at 12°C, which is close to what overwintering juveniles likely encounter offshore.\n\nThe data from Experiment 2 are presented in a related dataset (https://www.bco-dmo.org/dataset/898012). In both experiments, juveniles disproportionally accumulated lipid over lean mass, with lipid proportions tripling in Exp2 from 4% at 65 mm to 12% at 120 mm.\n\ncdm_data_type = Other\nVARIABLES:\nCollection_site (unitless)\nlongitude (degrees_east)\nlatitude (degrees_north)\nCollection_date (unitless)\nSample_date (unitless)\nSpecies (unitless)\nBSB_ID (unitless)\nGroup (unitless)\nTemp (degree Celsius)\nDays_W (number of days)\n... (21 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_897895_v1_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_897895_v1_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_897895_v1/index.htmlTable https://www.bco-dmo.org/dataset/897895 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_897895_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_897895_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_897895_v1
log in [Larval Sebastes Diet and Morphometric Data] - Larval Sebastes Diet and Morphometric Data from R/V Bob and Betty Beyster, R/V Shearwater BBB2102, BBB2104, SW2104, BBB2101 from January to April 2021 (RAPID Anchovy Response project) (RAPID: Understanding the unprecedented anchovy response to warm-water conditions in the California Current) This dataset includes body morphometrics of analyzed species of larval Rockfish (Sebastes spp.) from Bongo plankton net tows conducted in the subtropical Southern California Bight from January to April 2021. The larvae were dissected and the gut content analyzed. Prey taxa, development stage, length and width are also included in the data. Net tows were carried out on several cruises aboard R/V Bob and Betty Beyster and R/V Shearwater.\n\ncdm_data_type = Other\nVARIABLES:\nCruise (unitless)\ntime (Iso_datetime_utc, seconds since 1970-01-01T00:00:00Z)\nISO_DateTime_PDT (unitless)\nLine (unitless)\nSt (unitless)\nlatitude (degrees_north)\nlongitude (Long, degrees_east)\nTow_Depth (meters (m))\nMesh_Size (micrometers (um))\nLarva_ID (unitless)\nGrowth_Stage (unitless)\nSpecies (unitless)\nSpecies_AphiaID (unitless)\nSpecies_lsid (unitless)\nSL (millimeters (mm))\nBD (millimeters (mm))\nHL (millimeters (mm))\nPrey_Taxa (unitless)\nPrey_Taxa_AphiaID (unitless)\nPrey_Taxa_lsid (unitless)\nPrey_Stage (unitless)\nLength (millimeters (mm))\nWidth (millimeters (mm))\n BCO-DMO bcodmo_dataset_940302_v1
log in [Larval Sebastes Otolith and Morphometric Data] - Collected Larval Sebastes spp. Otolith and Morphometric Data from R/V Bob and Betty Beyster, R/V Shearwater BBB2102, BBB2104, SW2104, BBB2101 from January to April 2021 (RAPID Anchovy Response project) (RAPID: Understanding the unprecedented anchovy response to warm-water conditions in the California Current) This dataset includes the morphometrics of Rockfish (Sebastes spp.) larvae from Bongo plankton net tows conducted in the subtropical Southern California Bight from January to April 2021. Net tows were carried out on several cruises aboard R/V Bob and Betty Beyster and R/V Shearwater. The dataset include species names, morphometrics and larval development stage, age, otolith cores size and width or each growth increment.\n\ncdm_data_type = Other\nVARIABLES:\nCruise (unitless)\ntime (Iso_datetime_utc, seconds since 1970-01-01T00:00:00Z)\nISO_DateTime_PDT (unitless)\nLine (unitless)\nSt (unitless)\nlatitude (degrees_north)\nlongitude (Long, degrees_east)\nTow_Depth (meters (m))\nMesh_Size (micrometers (um))\nLarva_ID (unitless)\nGrowth_Stage (unitless)\nSpecies (unitless)\nSpecies_AphiaID (unitless)\nSpecies_lsid (unitless)\nSL (millimeters (mm))\nBD (millimeters (mm))\nHL (millimeters (mm))\nagecap (days)\nradcap (micrometers (um))\nrad1 (micrometers (um))\nrad2 (micrometers (um))\nrad3 (micrometers (um))\nrad4 (micrometers (um))\n... (45 more variables)\n BCO-DMO bcodmo_dataset_940324_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3894 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3894.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3894/ public [lionfish parasites] - Results of an investigation of parasite communities infecting lionfish (Pterois volitans) in their native range, Guam and the Philippines, and in their invaded range, the Bahamas and the Cayman Islands (Ecological Release and Resistance at Sea: Invasion of Atlantic Coral Reefs by Pacific Lionfish) Results of an investigation of parasite communities infecting lionfish (Pterois volitans) in their native range, Guam and the Philippines, and in their invaded range, the Bahamas and the Cayman Islands.\n\ncdm_data_type = Other\nVARIABLES:\nlocation (text)\nsite (text)\nlatitude (degrees_north)\nlongitude (degrees_east)\nspecies (text)\nfish_id (dimensionless)\nlen_tot (cm)\nweight (kg)\ndate (dimensionless)\nmonth (mm (01 to 12))\nyear (unitless)\nnotes (text)\nparasite (text)\nabundance (integer)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_3894_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3894/index.htmlTable https://www.bco-dmo.org/dataset/3894 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3894.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3894&showErrors=false&email= BCO-DMO bcodmo_dataset_3894
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_651461.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_651461 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_651461.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_651461/ public [Long-term Menidia menidia growth] - Laboratory study of long-term growth in juvenile Menidia menidia (Atlantic silverside) at contrasting CO2 levels for 16 to 122 days in 2015 (Collaborative research: Understanding the effects of acidification and hypoxia within and across generations in a coastal marine fish) Total length, wet weight, and condition factor of juvenile\nMenidia\\u00a0menidia reared at contrasting CO2 levels.\n \nThese data are\\u00a0associated with the corresponding paper:\n \nMurray, C.S., Fuiman, L., and Baumann, H.\\u00a0Consequences of elevated\nCO2\\u00a0exposure across multiple life stages in a coastal forage\nfish.\\u00a0ICES Journal of Marine Science\\u00a074:1051-1061(2017).\n\ncdm_data_type = Other\nVARIABLES:\nspecies (unitless)\nadult_collection_site (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndate_fertilization (unitless)\nage (days)\ndate_sample (unitless)\ntemp (Temperature, degrees celsius)\npH_treatment (P H Treatment, dimensionless)\nCO2_treatment (microatomosphere)\nlength_total (millimeter)\nwet_weight (milligram)\ncondition_factor (dimensionless)\ntank (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_651461_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_651461/index.htmlTable https://www.bco-dmo.org/dataset/651461 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_651461.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_651461&showErrors=false&email= BCO-DMO bcodmo_dataset_651461
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_922818_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_922818_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_922818_v1/ public [Macrophytes' amelioration of seawater acidity: Comparison among species] - Macrophytes' amelioration of seawater acidity: Comparison among four species of marine macrophytes (Ulva lactuca, Zostera marina, Fucus vesiculosus and Saccharina latissima) from the Gulf of Maine from June to July 2015 (REU Site: Bigelow Laboratory for Ocean Sciences - Undergraduate Research Experience in the Gulf of Maine and the World Ocean) An experiment examining the effects of increased CO2 concentrations upon the capacity of the different species of marine macrophytes to ameliorate seawater acidity via several assays in enclosed well-mixed, airtight chambers with no headspace, was conducted indoors at the Bigelow Laboratory for Ocean Sciences (Maine, USA), in June-July 2015. We explored the individual capacities of four species of marine macrophytes (Ulva lactuca, Zostera marina, Fucus vesiculosus and Saccharina latissima) to ameliorate seawater acidity in experimentally elevated pCO2. \n\nThis dataset includes data from experiment 1, comparison among species, described in the manuscript: Optimizing marine macrophyte capacity to locally ameliorate ocean acidification under variable light and flow regimes: Insights from an experimental approach (Ricart, A. M. et al. 2023).\n\ncdm_data_type = Other\nVARIABLES:\nSample (unitless)\nSpecies (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndate_start (unitless)\ndate_end (unitless)\nTreatment (microatmospheres)\nLiters (liters (L))\nHours (unitless)\nDry_Weight (grams (g))\nSalinity (unitless)\nTemperature (degrees Celcius (°C))\nInitial_Dissolved_Oxygen (micromolar per liter (uM/L))\nInitial_pH (total scale)\nInitial_ALK (micromolar per kilogram (uM/kg))\nInitial_pCO2 (microatmospheres)\ndelta_DO_norm (unitless)\ndelta_DIC_norm (unitless)\ndelta_pH_norm (unitless)\ndelta_omega_norm (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_922818_v1_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_922818_v1_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_922818_v1/index.htmlTable https://www.bco-dmo.org/dataset/922818 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_922818_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_922818_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_922818_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_922819_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_922819_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_922819_v1/ public [Macrophytes' amelioration of seawater acidity: Residence time and irradiance] - Macrophytes' amelioration of seawater acidity: Water residence time and irradiance of Saccharina latissima from the Gulf of Maine in November 2018 (REU Site: Bigelow Laboratory for Ocean Sciences - Undergraduate Research Experience in the Gulf of Maine and the World Ocean) An experiment examining the effects of water residence time upon Saccharina latissima capacity to ameliorate seawater acidity under ambient and simulated future scenarios of climate change in a gradient of irradiance was conducted indoors using tanks with a flow-through seawater system based at the Bigelow facilities in November 2018. In a previous experiment (experiment 1), we explored the individual capacities of four species of marine macrophytes (Ulva lactuca, Zostera marina, Fucus vesiculosus and Saccharina latissima) to ameliorate seawater acidity in experimentally elevated pCO2. Then in this experiment 2, we used the most responsive species (i.e., Saccharina latissima) to assess the effects of high and low water residence time on the amelioration of seawater acidity in ambient and simulated future scenarios of climate change across a gradient of irradiance.\n\nThis dataset includes data from experiment 2, residence time and irradiance, described in the manuscript: Optimizing marine macrophyte capacity to locally ameliorate ocean acidification under variable light and flow regimes: Insights from an experimental approach (Ricart, A. M. et al. 2023).\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nDate (unitless)\nAquaria (unitless)\nFuture_Ambient (unitless)\nKelp_Control (unitless)\nKelp_biomass_wet (grams (g))\nKelp_biomass_dry (grams (g))\nPAR (micromols m-2 s-1 (uM m-2 s-1))\nFlow_level (unitless)\nSalinity (unitless)\nTemperature (degrees Celsius (°C))\n... (7 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_922819_v1_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_922819_v1_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_922819_v1/index.htmlTable https://www.bco-dmo.org/dataset/922819 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_922819_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_922819_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_922819_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_658275 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_658275.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_658275/ public [Mapping information and signs for individual diseased corals] - Data describing every diseased coral record from surveys in the Caribbean during 2012 (Contagious coral diseases project) (Are coral diseases contagious?) Data describing every diseased coral record from surveys in the Caribbean during 2012 (Contagious coral diseases project)\n\ncdm_data_type = Other\nVARIABLES:\ntemp_level (unitless)\nlocation (unitless)\nreef (unitless)\nsite_number (unitless)\ndepth_max (Depth, meters)\nmeter (unitless)\ngenus (unitless)\nspecies (unitless)\nUIN (unitless)\nsign_1 (unitless)\nsign_2 (unitless)\nsign_3 (unitless)\nsign_4 (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_658275/index.htmlTable https://www.bco-dmo.org/dataset/658275 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_658275.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_658275&showErrors=false&email= BCO-DMO bcodmo_dataset_658275
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_641479.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_641479 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_641479.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_641479/ public [MarBio. 2016: calcification and biomass] - Calcification Rates and Biomass of 4 Coral Species, 2 Temperatures and 2 pCO2 Levels from Experiments at LTER site in Moorea, French Polynesia, 2011 (OA_Corals project) (RUI: Ocean Acidification- Category 1- The effects of ocean acidification on the organismic biology and community ecology of corals, calcified algae, and coral reefs) Area-normalized calcification (mg cm-2 d-1) and biomass normalized\ncalcification (mg mg-1) for Pocillopora meandrina, massive Porites spp.,\nAcropora pulchra and Millepora platyphylla, as a function of pCO2 (408\n\\u00b5atm versus 913 \\u00b5atm) and temperature (28.0\\u00b0C and 30.1\\u00b0C),\ncollected in Moorea 2011.\n \nRelated Reference:  \n Darren Brown, Peter J. Edmunds. Differences in the responses of three\nscleractinians and the hydrocoral Millepora platyphylla to ocean\nacidification. Marine Biology, 2016 (in press).\n \nRelated Dataset:  \n[MarBio. 2016: tank conditions](\\\\https://www.bco-dmo.org/dataset/641759\\\\)\n\ncdm_data_type = Other\nVARIABLES:\nlocation (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nspecies (unitless)\npCO2 (P CO2, unitless)\ntemp (Temperature, unitless)\ntank (unitless)\ntreatment (unitless)\ncalcification (cm-2 day-1)\nbiomass (mg mg-1)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_641479_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_641479/index.htmlTable https://www.bco-dmo.org/dataset/641479 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_641479.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_641479&showErrors=false&email= BCO-DMO bcodmo_dataset_641479
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_701840.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_701840 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_701840.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_701840/ public [Mark Recapture] - Mark recapture data for introduced crab in Seadrift Lagoon 2011-2018 (RAPID: A rare opportunity to examine overcompensation resulting from intensive harvest of an introduced predator) Mark recapture data for introduced crab in Seadrift Lagoon (Central California coast, shallow subtidal (<3 m depth)) in 2015.\n\ncdm_data_type = Other\nVARIABLES:\nlagoon (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndate (unitless)\nsite (unitless)\nsize (millimeters (mm))\nsex (unitless)\ngrav (unitless)\ninjury (unitless)\nrecap_mark (unitless)\nspecies_code (unitless)\nspecies (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_701840_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_701840/index.htmlTable https://www.bco-dmo.org/dataset/701840 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_701840.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_701840&showErrors=false&email= BCO-DMO bcodmo_dataset_701840
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_734674 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_734674.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_734674/ public [MBRS Symbiodinium OTU] - OTU molecular abundances for coral Symbiodinium, Belize Mesoamerican Barrier Reef System (MBRS), 2014-2015 (Investigating the influence of thermal history on coral growth response to recent and predicted end-of-century ocean warming across a cascade of ecological scales) This dataset contains relative abundance (counts?) of operational taxonomic units (OTUs) from Sumbiodinium samples collected from three coral species (S. siderea, S. radians, and P. strigosa) at nine sites across four latitudes along the Belize MBRS in 2014 and 2015. These sites were previously characterized into three thermally distinct regimes (lowTP, modTP, highTP) and exhibited variations in coral species diversity and richness.\n\ncdm_data_type = Other\nVARIABLES:\nspecies (unitless)\nspecies_code (unitless)\nSample (unitless)\nsite (unitless)\nthermal_type (unitless)\nlat_location (Latitude, unitless)\nillumina_run (unitless)\notu_diversity (OTU's)\nC1_I (unitless)\nB1_I (unitless)\nC1_II (unitless)\nC1_III (unitless)\nD1a (unitless)\nB1_II (unitless)\nG3 (unitless)\nA4a (unitless)\nB_BG (unitless)\nC3 (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_734674/index.htmlTable https://www.bco-dmo.org/dataset/734674 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_734674.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_734674&showErrors=false&email= BCO-DMO bcodmo_dataset_734674
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3111 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3111.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3111/ public [MOC zoop AK-LTOP] - AK-LTOP MOCNESS tow zooplankton abundance and biomass from R/V Alpha Helix, R/V Wecoma multiple cruises in the Northeast Pacific from 1997-2004 (NEP project) (U.S. GLOBEC Northeast Pacific) AK-LTOP MOCNESS tow zooplankton abundance and biomass from R/V Alpha Helix, R/V Wecoma multiple cruises in the Northeast Pacific from 1997-2004.\n\ncdm_data_type = Other\nVARIABLES:\nyear (unitless)\ncruise_id (text)\nsta_id (dimensionless)\ntow (dimensionless)\ndate_local (unitless)\nmonth_local (mm (01 to 12))\nday_local (dd (0 to 31))\nyrday_local (dimensionless)\nnet (dimensionless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndepth_min (Depth, meters)\ndepth (m)\nvol_filt (meters^3)\ntime_local (HHMM)\nspecies (text)\nNODC_code (dimensionless)\nstage (text)\nabundance (number per meter3)\nbiomass (grams/meter^3)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_3111_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3111/index.htmlTable https://www.bco-dmo.org/dataset/3111 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3111.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3111&showErrors=false&email= BCO-DMO bcodmo_dataset_3111
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2454.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2454 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2454.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_2454/ public [MOC1 zoop abund] - MOCNESS-1 Plankton Abundances from the R/V Wecoma, R/V New Horizon W0004B, NH0005, W0007A, NH0007, W0009A, W0204A, W0205A from the Northeast Pacific, 2000 and 2002 (NEP project) (U.S. GLOBEC Northeast Pacific) MOCNESS-1 Plankton Abundances from the R/V Wecoma, R/V New Horizon W0004B, NH0005, W0007A, NH0007, W0009A, W0204A, W0205A from the Northeast Pacific, 2000 and 2002 (NEP project)\n\ncdm_data_type = Other\nVARIABLES:\ncruise_id (n/a)\nyear (n/a)\nprogram (n/a)\ncast (n/a)\nstation (n/a)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndepth_bottom (Depth, meters)\nsample_id (n/a)\nmin_sample_depth (meters)\ndepth (Max Sample Depth, m)\nmonth_local (n/a)\nday_local (n/a)\ntime_local (n/a)\nd_n_flag (n/a)\ngear_type (n/a)\ngear_area_m2 (m^2)\ngear_mesh (mm)\nvol_filt (m^3)\ncounter_id (n/a)\ncomments (n/a)\nnodc_code (n/a)\nspecies (n/a)\nlife_stage (n/a)\nabund (individuals per m^3)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_2454_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_2454/index.htmlTable https://www.bco-dmo.org/dataset/2454 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_2454.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_2454&showErrors=false&email= BCO-DMO bcodmo_dataset_2454
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2326 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2326.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_2326/ public [MOC10_abund] - Zooplankton abundance data from the 10m2 MOCNESS from R/V Endeavor, R/V Albatross I, and; R/V Oceanus broadscale cruises in the Gulf of Maine and Georges Bank from 1995-1999 (GB project (U.S. GLOBEC Georges Bank) Zooplankton abundance data from the 10m2 MOCNESS from R/V Endeavor, R/V Albatross I, and; R/V Oceanus broadscale cruises in the Gulf of Maine and Georges Bank from 1995-1999\n\ncdm_data_type = Other\nVARIABLES:\ncruiseid (text)\nyear (unitless)\nmonth_local (unitless)\nstation_std (integer)\ntime_of_day (text)\ntime_start (unitless)\ntime_end (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nnet (integer)\ndepth_mid (Depth, meters)\ndepth (m)\nvol_filt (cubic meters (m^3))\nspecies (text)\nabund (number per cubic meters (n/1000 m^3))\nphylum (text)\norder (text)\nfamily\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_2326_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_2326/index.htmlTable https://www.bco-dmo.org/dataset/2326 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_2326.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_2326&showErrors=false&email= BCO-DMO bcodmo_dataset_2326
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2327 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2327.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_2327/ public [MOC10data_lengths] - Zooplankton length data from the 10m2 MOCNESS from R/V Endeavor, R/V Albatross IV,and R/V Oceanusbroadscale cruises in the Gulf of Maine and Georges Bank from 1995-1999 (GB project) (U.S. GLOBEC Georges Bank) Zooplankton length data from the 10m2 MOCNESS from R/V Endeavor, R/V Albatross IV,and R/V Oceanusbroadscale cruises in the Gulf of Maine and Georges Bank from 1995-1999\n\ncdm_data_type = Other\nVARIABLES:\ncruiseid\nyear\nmonth_local\nstation_std\nlatitude (degrees_north)\nlongitude (degrees_east)\nnet\nspecies\nphylum\nlength (mm)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_2327_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_2327/index.htmlTable https://www.bco-dmo.org/dataset/2327 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_2327.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_2327&showErrors=false&email= BCO-DMO bcodmo_dataset_2327
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_701863.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_701863 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_701863.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_701863/ public [Monthly Trapping] - Demographic data from introduced crab in Seadrift Lagoon 2009-2019 (RAPID: A rare opportunity to examine overcompensation resulting from intensive harvest of an introduced predator) Demographic data from introduced crab in Seadrift Lagoon (Central California coast, shallow subtidal (<3 m depth)) in 2015.\n\ncdm_data_type = Other\nVARIABLES:\nlagoon (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndate (unitless)\nsite (unitless)\nsize (millimeters (mm))\nsex (unitless)\ngravid (unitless)\ninjury (unitless)\nrecap_mark (unitless)\nspecies_code (unitless)\nspecies (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_701863_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_701863/index.htmlTable https://www.bco-dmo.org/dataset/701863 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_701863.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_701863&showErrors=false&email= BCO-DMO bcodmo_dataset_701863
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_953794_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_953794_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_953794_v1/ public [Mussel gene expression] - Gene expression data from mussels (Mytilus edulis) subjected to stable versus fluctuating temperatures from laboratory experiments conducted in 2023 (Collaborative Research: Microscale interactions of foundation species with their fluid environment: biological feedbacks alter ecological interactions of mussels) We measured gene expression levels of blue mussels (Mytilus edulis Linneaus, 1758) under stable versus fluctuating water temperatures. Mussels were obtained from the intertidal zone at Black Point in Narragansett Bay, RI, USA (41° 24′ 4.4964″ N, 71° 27′ 43.8228″ W) and shipped in chilled coolers overnight to the lab at Carleton College in Northfild MN.  Mussels were acclimated in a recirculating seawater (Instant Ocean, Blacksburg, VA, USA) tank system (Aquaneering Inc., San Marcos, CA, USA) for 2-3 weeks at 14-16°C and fed commercial Shellfish Diet 1800 (Reed Mariculture, Campbell, CA, USA) at a rate of 5% dry mussel tissue weight day-1 \n  \nDuring our experiment, mussels were maintained for five days under one of three stable temperature treatments (e.g., 15, 20, or 25°C) or under a fluctuating temperature treatment between 15 and 25°C. On each day of the experiment, gill tissue from three mussels per temperature treatment were sampled to test for the expression of stress response (hsp70) and cellular respiration (NADH) related genes.\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\ndate_local (unitless)\nDay (unitless)\nTemperature (unitless)\nQUBIT_QUANT (nanograms per microliter (ng/uL))\nQUBIT_QUAL (unitless)\nNANO_QUANT (nanograms per microliter (ng/uL))\nA260_to_280 (unitless)\ndelta_delta_Ct (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_953794_v1/index.htmlTable https://www.bco-dmo.org/dataset/953794 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_953794_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_953794_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_953794_v1
log in [Mussel lab incubations: periostracum and pH (effect on shell dissolution)] - Lab incubations of mussels (Mytilus californianus) examining the influence of periostracum cover and pH on external shell dissolution at Marshall Gulch Beach, CA from August 2021 to March 2022 (Invertebrate calcification and behavior in seawater of decoupled carbonate chemistry) Reductions to seawater pH challenge the shell integrity of marine calcifiers. Many molluscs have an external organic layer (the periostracum) that limits exposure of underlying shell to the external environment, which could potentially help combat shell dissolution under corrosive seawater conditions. We tested this possibility in adult California mussels, Mytilus californianus. We quantified shell dissolution rates as a function of periostracum cover across three levels of reduced pH (7.7, 7.5, and 7.4 on the total scale). This dataset represents shell dissolution data of California Mussels as a function of shell periostracum cover and pH level from lab experiments conducted at the Bodega Marine Laboratory, University of California, Davis in July and August 2022. For the current study, adult mussels (42 - 64 mm in length) were collected from Marshall Gulch, California (38.369738 °N, -123.073921 °W) between August 2021 and March 2022 and transported immediately to the University of California Davis' Bodega Marine Laboratory (< 30 min distance), in Bodega Bay, California. Mussels were held in filtered, flow-through seawater and fed ad libitum until used in experiments.\n\nFurther experiments on external shell dissolution were performed in the dataset: Lab incubations of mussels (Mytilus californianus) examining the influence of simulated abrasion of periostracum on external shell dissolution at Marshall Gulch Beach, CA from August 2021 to March 2022 (see BCO-DMO related dataset).\n\ncdm_data_type = Other\nVARIABLES:\nINDEX (unitless)\nspecies (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndate_in (unitless)\ntime_in (unitless)\ntime_in_UTC (seconds since 1970-01-01T00:00:00Z)\ndate_out (unitless)\ntime_out (unitless)\ntime_out_UTC (seconds since 1970-01-01T00:00:00Z)\n... (17 more variables)\n BCO-DMO bcodmo_dataset_935476_v1
log in [Mussel lab incubations: simulated periostracum abrasion (effect on shell dissolution)] - Lab incubations of mussels (Mytilus californianus) examining the influence of simulated abrasion of periostracum on external shell dissolution at Marshall Gulch Beach, CA from August 2021 to March 2022 (Invertebrate calcification and behavior in seawater of decoupled carbonate chemistry) These data build off of experimental incubations described in Dataset 1. Given that the periostracum can be eroded over time, we were interested in whether the abrasion of the periostracum by sand of differing coarseness might separately influence dissolution rates under corrosive seawater conditions. Therefore, we conducted incubations of abraded California mussel valves, Mytilus californianus, (in addition to unsanded control valves) and measured dissolution rates as a function of sand paper grit coarseness (pH = 7.4). This dataset represents shell dissolution data of California Mussels from lab experiments conducted at the Bodega Marine Laboratory, University of California, Davis in August 2022. For the current study, adult mussels (42 - 64 mm in length) were collected from Marshall Gulch, California (38.369738 °N, -123.073921 °W) between August 2021 and March 2022 and transported immediately to the University of California Davis' Bodega Marine Laboratory (< 30 min distance), in Bodega Bay, California. Mussels were held in filtered, flow-through seawater and fed ad libitum until used in experiments.\n\nDataset 1: Lab incubations of mussels (Mytilus californianus) examining the influence of periostracum cover and pH on external shell dissolution at Marshall Gulch Beach, CA from August 2021 to March 2022 (see BCO-DMO related dataset).\n\ncdm_data_type = Other\nVARIABLES:\nINDEX (unitless)\nspecies (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndate_in (unitless)\ntime_in (unitless)\ntime_in_UTC (seconds since 1970-01-01T00:00:00Z)\ndate_out (unitless)\ntime_out (unitless)\ntime_out_UTC (seconds since 1970-01-01T00:00:00Z)\nsanding (unitless)\nph_spec_0 (unitless)\n... (15 more variables)\n BCO-DMO bcodmo_dataset_935480_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_953833_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_953833_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_953833_v1/ public [Mussel respiration rates] - Mussel respiration data from experiments with mussels sourced in WA conducted at University of Washington Friday Harbor Laboratories, Friday Harbor, WA from 2020 to 2023 (Collaborative Research: Microscale interactions of foundation species with their fluid environment: biological feedbacks alter ecological interactions of mussels) From 2021 to 2023, we measured aquatic respiration rates of three species of mytilid mussels (Mytilus trossulus Gould, M. galloprovincialis (L.), and M. californianus Conrad) under a range of water temperatures and velocities. M. californianus was obtained from the intertidal zone at Cattle Point, WA, USA (48.449966, -122.964350) and shipped in chilled coolers to the University of Washington Friday Harbor Laboratories (48.545998, -123.013046). M. trossulus and M. galloprovinicialis were obtained from a commercial supplier (Penn Cove Shellfish, Coupeville, WA, USA). Mussels were acclimated in a recirculating seawater.\n\nWe conducted lab experiments to investigate the effects of multiple environmental stressors (e.g., water temperature and velocity) on physiological responses in three closely-related mytilid mussel species. In closed respirometry chambers  (15 cm × 5 cm × 5 cm, L × W × H), we measured oxygen use by individual mussels under a combination of five temperatures (e.g.,  5, 11, 17, 23, and 29°C) and five velocities (2, 4, 6, 10, and 20 cm s-1) in a fully crossed design. Oxygen concentrations were measured with non-intrusive fiber-optic O2 sensors (Pyroscience, Aachen, DEU). Samples were recorded at a rate of 1 Hz and drift of the O2 probe was negligible (e.g., <0.1% over 2 h at 20°C). Trials were run for 2 h, ensuring that a stable rate of decline could be identified. After each trial, all soft tissues were dried for 72 hours at 60°C (Lindeberg/Blue M Vacuum Oven; ThermoScientific Inc., Waltham, MA, USA) and weighed using an analytical balance (0.001 g; PA153 Pioneer Analytical Balance; Ohaus Corp., Pine Brook, NJ, USA). Data were analyzed to estimate respiration rates using the R package respR (Harianto, 2019).\n\ncdm_data_type = Other\nVARIABLES:\nYear (unitless)\nSpecies (unitless)\nTemperature (degrees Celsius (deg C))\nVelocity (centimeters per second (cm s-1))\nDry_weight (milligrams (mg))\nRespiration (micromoles of O2 per gram per hour (umol O2 g-1 h-1))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_953833_v1/index.htmlTable https://www.bco-dmo.org/dataset/953833 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_953833_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_953833_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_953833_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_653816.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_653816 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_653816.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_653816/ public [Native prey fish surveys] - Censuses of the native prey fish populations during lionfish surveys in Eleuthera, Bahamas from July to August in 2012 (Mechanisms and Consequences of Fish Biodiversity Loss on Atlantic Coral Reefs Caused by Invasive Pacific Lionfish) Censuses of the native prey fish populations during lionfish surveys in Eleuthera, Bahamas from July to August in 2012\n\ncdm_data_type = Other\nVARIABLES:\nyear (unitless)\ntime_period (unitless)\nmonth (unitless)\nday (unitless)\ntime_start (unitless)\ntime_end (unitless)\nreef (unitless)\nspecies (unitless)\nlength_max_1 (count)\nlength_max_2 (count)\nlength_max_3 (count)\nlength_max_4 (count)\nlength_max_5 (count)\nlength_max_6 (count)\nlength_max_7 (count)\nlength_max_8 (count)\nlength_max_9 (count)\nlength_max_10 (count)\nlength_max_15 (count)\nlength_max_20 (count)\nlength_max_25 (count)\nlength_max_30 (count)\nlength_max_35 (count)\nlength_max_40 (count)\nlength_max_45 (count)\nlength_max_50 (count)\nlength_max_100 (count)\nlength_max_150 (count)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_653816/index.htmlTable https://www.bco-dmo.org/dataset/653816 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_653816.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_653816&showErrors=false&email= BCO-DMO bcodmo_dataset_653816
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_662791 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_662791.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_662791/ public [Nearest neighbor surveys] - Data describing interactions between neighboring coral colonies on St. John, Virgin Islands in 2014. (LTREB Long-term coral reef community dynamics in St. John, USVI: 1987-2019) Data describing interactions between neighboring coral colonies on St. John, Virgin Islands in 2014.\n\ncdm_data_type = Other\nVARIABLES:\nsite (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ncolony (unitless)\ntransect (unitless)\nmeter (meters)\nspecies (unitless)\nheight (centimeters)\nwidth (centimeters)\nthickness (centimeters)\nvisibleInhibition (Visible Inhibition, unitless)\ndistance (centimeters)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_662791_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_662791/index.htmlTable https://www.bco-dmo.org/dataset/662791 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_662791.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_662791&showErrors=false&email= BCO-DMO bcodmo_dataset_662791
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_714252.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_714252 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_714252.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_714252/ public [Nekton predation in seagrass] - Relative predation intensity within temperate seagrass habitat during June 2015 (Habitat_Fragmentation project) (Collaborative Research: Habitat fragmentation effects on fish diversity at landscape scales: experimental tests of multiple mechanisms) Our investigation of seagrass edge effects on mesopredators and larger predators took place in Back Sound, North Carolina (34 degrees 40 minutes North, 76 degrees 34 minutes West). Predation-driven mortality (loss rates of tethered individuals) of blue crabs and pinfish were monitored within a 5,600 m2 seagrass meadow at Jack's Island along the southern rim of Back Sound. These predation measurements were collected during June-July, 2015, in connection with the global-scale Zostera Experimental Network study.\n\ncdm_data_type = Other\nVARIABLES:\nsite_name (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nspecies (unitless)\nreplicate (unitless)\nstart_date (unitless)\ntether_along_edge (unitless)\nshoot_density (percent (pcnt))\nprey_size (milimeters (mm))\ntime_on_tether (hours)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_714252_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_714252/index.htmlTable https://www.bco-dmo.org/dataset/714252 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_714252.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_714252&showErrors=false&email= BCO-DMO bcodmo_dataset_714252
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_907880_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_907880_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_907880_v1/ public [Neocalanus flemingeri lipid fullness] - Post-diapause Neocalanus flemingeri females morphometric measurements and calculations of lipid fullness and lipid volume taken from the R/V Sikuliaq and the R/V Tiglax in the Northern Gulf of Alaska from 2019-06-30 to 2019-09-13 (Collaborative Proposal: Optimizing Recruitment of Neocalanus copepods through Strategic Timing of Reproduction and Growth in the Gulf of Alaska) Morphometric data on Neocalanus flemingeri females were made on individuals collected in diapause in June and September, 2019 and after incubation in the laboratory for up to 4.5 weeks. Collections were made from depth in Prince William Sound in the Gulf of Alaska during two NGA LTER cruises. After sorting, females were incubated in flasks at 4-6ºC for up to 4.5 weeks. Individuals were removed for imaging and experimental incubations to study oocyte production. Morphometric analysis was used to measure prosome length and area as well as lipid sac area for lipid fullness and lipid volume calculations. Lipid consumption during diapause was minimal and modest initially.\n\ncdm_data_type = Other\nVARIABLES:\nStation (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nDate_collected (unitless)\nCollection_month (unitless)\nSpecies (unitless)\nSex (unitless)\nEdU_sample_ID_number (unitless)\nUsed_in_EdU_experiments (unitless)\nLength_of_EdU_incubation_in_hours (hours)\nImage_number_light_microscope (unitless)\nDate_image_was_taken (unitless)\nTime_point (hours or weeks)\nTime_point_in_days (days)\nProsome_length (millimeters (mm))\nProsome_area (square millimeters (mm^2))\nLipid_area (square millimeters (mm^2))\nLipid_volume (milligrams (mg))\nLipid_fullness_percentage (percent (%))\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_907880_v1_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_907880_v1_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_907880_v1/index.htmlTable https://www.bco-dmo.org/dataset/907880 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_907880_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_907880_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_907880_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_908514_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_908514_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_908514_v1/ public [Neocalanus flemingeri oocyte production] - Oocytes formation in post-diapause Neocalanus flemingeri females from the R/V Sikuliaq and the R/V Tiglax in the Northern Gulf of Alaska from 2019-06-30 to 2019-09-13 (Collaborative Proposal: Optimizing Recruitment of Neocalanus copepods through Strategic Timing of Reproduction and Growth in the Gulf of Alaska) These data are from a study on the formation of oocytes in post-diapause Neocalanus flemingeri females collected from depth in Prince William Sound in the Gulf of Alaska. Collections were made during two NGA LTER cruises. After sorting, females were incubated in flasks and removed for experimental incubations and imaging. Oocyte production by post-diapause females that involved DNA replication in the ovary and oviducts was examined using incubation in 5-Ethynyl-2'-deoxyuridine (EdU). Both oogonia and oocytes incorporated EdU, with the number of EdU labeled cells peaking at 72 hours following diapause termination. Cells labeling with EdU remained high for two weeks, decreasing thereafter with no labeling detected by four weeks post diapause, and three to four weeks before spawning of the first clutch of eggs. By limiting DNA replication to the initial phase, the females effectively separate oocyte production from oocyte provisioning.\n\ncdm_data_type = Other\nVARIABLES:\nStation (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nDate_collected (unitless)\nCollection_month (unitless)\nSpecies (unitless)\nSex (unitless)\nEdU_sample_ID_number (unitless)\nAmount_of_EdU (milligrams (mg))\nIncubation_date_at_start (unitless)\nLength_of_EdU_incubation_in_hours (hours)\nTime_point_in_days (days)\nNumber_of_cells_replicating (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_908514_v1_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_908514_v1_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_908514_v1/index.htmlTable https://www.bco-dmo.org/dataset/908514 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_908514_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_908514_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_908514_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_733063 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_733063/ public [Octocoral transects - species list] - Octocoral species list used during surveys in St. John, US Virgin Islands between 2014-2017 (St. John LTREB project, VI_Octocorals) (LTREB Long-term coral reef community dynamics in St. John, USVI: 1987-2019) Octocoral species list used during surveys in St. John, US Virgin Islands between 2014-2018\n\ncdm_data_type = Other\nVARIABLES:\nfield_code (unitless)\nspecies (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_733063/index.htmlTable https://www.bco-dmo.org/dataset/733063 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_733063.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_733063&showErrors=false&email= BCO-DMO bcodmo_dataset_733063
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_751176.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_751176 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_751176.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_751176/ public [octocoral] - Octocoral species abundance during transect surveys at four sites on the south shore of St. John, US Virgin Islands from November to December 2017 (RAPID: Resilience of Caribbean octocorals following Hurricanes Irma and Maria) This dataset contains octocoral colony heights measured during transect surveys at four sites on the south shore of St. John, US Virgin Islands in November 2017 following Hurricanes Irma and Maria.\n\ncdm_data_type = Other\nVARIABLES:\nSite (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nCensus_Year (unitless)\nDate (unitless)\nTransect_Position (meters (m))\nSide_of_transect (unitless)\nMeter_on_transect (meters (m))\nSpecies_code (unitless)\nHeight_of_living_tissue (centimeters (cm))\nTotal_Height (centimeters (cm))\nGenus_Species (unitless)\nGenus (unitless)\nSpecies (unitless)\nComments_1 (unitless)\nComments_2 (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_751176_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_751176/index.htmlTable https://www.bco-dmo.org/dataset/751176 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_751176.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_751176&showErrors=false&email= BCO-DMO bcodmo_dataset_751176
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_735137.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_735137 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_735137.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_735137/ public [Octocorals at East Cabritte and Europa Bay] - Location, abundance, and size of various octocoral species in St. John, USVI from 2014 to 2015. (LTREB Long-term coral reef community dynamics in St. John, USVI: 1987-2019) Location, abundance, and size of various octocoral species in St. John, USVI from 2014 to 2015.\n\ncdm_data_type = Other\nVARIABLES:\nsite (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndate (unitless)\ntransect_pos (unitless)\nfield_code (unitless)\nspecies (unitless)\ntransect_side (unitless)\ntransect_m (meters)\nheight (centimeters)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_735137_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_735137/index.htmlTable https://www.bco-dmo.org/dataset/735137 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_735137.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_735137&showErrors=false&email= BCO-DMO bcodmo_dataset_735137
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_490464.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_490464 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_490464.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_490464/ public [Oculina coral OA expt] - Calcification and linear extension rates for Oculina arbuscula corals grown under different pCO2 levels; from the Cohen lab at WHOI in Woods Hole, MA (OA Nutrition and Coral Calcification project) (An Investigation of the Role of Nutrition in the Coral Calcification Response to Ocean Acidification) Data from experiments examining the effect of CO2-induced ocean acidification\non the scleractinian coral Oculina arbuscula.\n \nFor more information on the experimental methods and results, see Ries et al.,\n2010.\n \nThese data have also been deposited to PANGAEA where additional carbonate\nsystem variables were calculated as described by Nisumaa et al. (2010). See:\n[http://doi.pangaea.de/10.1594/PANGAEA.754790](\\\\http://doi.pangaea.de/10.1594/PANGAEA.754790\\\\)\n\ncdm_data_type = Other\nVARIABLES:\nomega_Arg (dimensionless)\nspecies (dimensionless)\nsample (dimensionless)\nbuoyant_wt_init (milligrams (mg))\nbuoyant_wt_final (milligrams (mg))\ncalcification_rate (percent (%))\nlinear_ext (micrometers (um))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_490464/index.htmlTable https://www.bco-dmo.org/dataset/490464 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_490464.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_490464&showErrors=false&email= BCO-DMO bcodmo_dataset_490464
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_782247.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_782247 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_782247.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_782247/ public [Otolith microstructure] - Otolith microstructure of young-of-year Atlantic silversides (Menidia menidia) from Mumford Cove during 2015 (Collaborative research: Understanding the effects of acidification and hypoxia within and across generations in a coastal marine fish) Back-calculated age, hatch date, length-at-age, growth rate, and experienced temperature of young-of-year Atlantic silversides (Menidia menidia) collected during 3 successive collections in Mumford Cove, CT in fall 2015.\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\nCollection_Date (unitless)\nIndividual_number (unitless)\nTotal_length (centimeters (cm))\nTotal_length_class (centimeters (cm))\nTotal_length_group (unitless)\nSex (unitless)\nAge (days post hatch)\nHatch_Date (unitless)\nBiweekly_hatch_interval (unitless)\nHatch_check_radius (micrometer (um))\nOtolith_size (micrometer (um))\nHatch_check_flag (unitless)\nOtolith_flag (unitless)\nScaling_factor (unitless)\nIncrement_formation_date (unitless)\nTemperature (degrees Celsius)\nIncrement (Number)\nIncrement_width (micrometer (um))\nLength_at_age (millimeter (mm))\nGrowth_rate (millimeter per day (mm/d))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_782247/index.htmlTable https://www.bco-dmo.org/dataset/782247 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_782247.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_782247&showErrors=false&email= BCO-DMO bcodmo_dataset_782247
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_511217 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_511217.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_511217/ public [oxidative stress TEP] - Experimental results: Exopolymer production by phytoplankton under oxidative stress; conducted at the Thornton lab, TAMU from 2007-2012 (Diatom EPS Production project) (Effect of Temperature on Extracellular Polymeric Substance Production (EPS) by Diatoms) Data from laboratory experiment on exopolymer production by the diatom Thalassiosira wessiflogii (CCMP 1051) and the cyanobacterium Synechococcus elongates_cf (CCMP 1379) under conditions of oxidative stress.\n\ncdm_data_type = Other\nVARIABLES:\nspecies (dimensionless)\nday (dimensionless)\nH2O2 (H2 O2, micromolar (uM))\nturbidity (NTU)\ncell_conc (cells per milliliter (cells mL-1))\nchla (Concentration Of Chlorophyll In Sea Water, micrograms per liter (ug L-1))\nPSII (quantum yield of photosystem II)\ncaspase_like_activity (relative fluorescence units per milligrams protein per hour (RFU mg protein-1 h-1))\nstained_cells_pcnt (percent (%))\nTEP_conc (micrometers TEP per milliliter (um2 mL-1))\nTEP_abund (TEP per milliliter (mL-1))\nTEP_per_chla (Concentration Of Chlorophyll In Sea Water, square millimeters of TEP per nanogram of chla (mm2 (ng chl. a)-1))\nCSP_conc (micrometers CSP per milliliter (um2 mL-1))\nCSP_abund (CSP per milliliter (mL-1))\nCSP_per_chla (Concentration Of Chlorophyll In Sea Water, square millimeters of CSP per nanogram of chlorophyll a (mm2 (ng chl. a)-1))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_511217/index.htmlTable https://www.bco-dmo.org/dataset/511217 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_511217.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_511217&showErrors=false&email= BCO-DMO bcodmo_dataset_511217
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_779425 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_779425.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_779425/ public [Oxygen Metrics] - Oxygen metrics for retinal function in marine invertebrate larvae determined with electroretinograms (Vision-mediated influence of low oxygen on the physiology and ecology  of marine larvae) Oxygen metrics for retinal function in marine invertebrate larvae determined with electroretinograms\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\nExperiment_Name (unitless)\nMetric (unitless)\nO2_umol_l (micromole per liter (umol/L))\nO2_ml_l (milliliter per liter (ml/l))\nO2_umol_kg (micromole per kg (umol/kg))\nO2_pO2 (O2 P O2, kiloPascale (kPa))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_779425/index.htmlTable https://www.bco-dmo.org/dataset/779425 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_779425.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_779425&showErrors=false&email= BCO-DMO bcodmo_dataset_779425
log in [Palau Coral Reef Experiment 2018:  Pulse Amplitude Modulation (PAM) fluorometry] - Coral pulse amplitude modulation (PAM) fluorometry data from a heating experiment using samples collected from Nikko Bay and Rebotel Reef in Palau in the spring of 2018 (Collaborative Research: Stability, flexibility, and functionality of thermally tolerant coral symbioses) Coral reefs surrounding Palau, Micronesia are living within a broad range of thermal habitats. Specifically, corals living on the offshore barrier reefs surrounding Palau reside in waters with low temperature variability compared to the much warmer and more acidic waters of near shore environments surrounding the Rock Island habitats. \n\nThis study was designed to test the differences in thermal physiology among two species of reef corals that reside at both of these locations. Specifically, we examined how short-term elevated temperature influences  the photochemistry of each coral species from each location before and after heating, as measured by active chlorophyll fluorescence recorded by pulse amplitude modulation (PAM) fluorometry.\n\ncdm_data_type = Other\nVARIABLES:\nLocation_Name (unitless)\nlongitude (degrees_east)\nlatitude (degrees_north)\nSpecies (unitless)\nDate (unitless)\nDay (unitless)\nTreatment (unitless)\nLocation (unitless)\nColony (unitless)\nFrag (unitless)\nSymbiont (unitless)\nFq_Fm (unitless)\nFv_Fm (unitless)\nQm (unitless)\n BCO-DMO bcodmo_dataset_855054_v1
log in [Palau Coral Reef Experiment 2018: Biometrics] - Coral biometrics data from a heating experiment using samples collected from Nikko Bay and Rebotel Reef in Palau in the spring of 2018 (Collaborative Research: Stability, flexibility, and functionality of thermally tolerant coral symbioses) Using samples collected from Nikko Bay and Rebotel Reef in Palau in the spring of 2018, this dataset examines coral physiology of two species of coral, Psammacora digitata and Pocillopora verrucosa, as part of a short-term heating experiment.\n\ncdm_data_type = Other\nVARIABLES:\nLocation_Name (unitless)\nlongitude (degrees_east)\nlatitude (degrees_north)\nSpecies (unitless)\nLSID (units)\nDate (unitless)\nDay (unitless)\nSymbiont (unitless)\nTreatment (Degrees Celcius (°C))\nColony (unitless)\nCell_Density (number of cells per square centimeter of coral)\nChl_a (picograms chlorophyll a per algal cell)\nHost_protein (micrograms soluble protein per square centimeter of coral skeleton)\nGross_photosynthesis (micrograms of oxygen per algal cell per hour)\nRespiration (milligrams oxygen per milligrams animal protein per hour)\nPhotosynthesis_Respiration (unitless)\n BCO-DMO bcodmo_dataset_855036_v1
log in [Palau Coral Reef Experiment 2018: Isotopes] - Coral Isotope data from a heating experiment using samples collected from Nikko Bay and Rebotel Reef in Palau in the spring of 2018 (Collaborative Research: Stability, flexibility, and functionality of thermally tolerant coral symbioses) Coral reefs surrounding Palau, Micronesia are living within a broad range of thermal habitats. Specifically, corals living on the offshore barrier reefs surrounding Palau reside in waters with low temperature variability compared to the much warmer and more acidic waters of near shore environments surrounding the Rock Island habitats. \n\nThis study was designed to test the differences in thermal physiology among two species of reef corals that reside at both of these locations. Specifically, we examined how short-term elevated temperature influences  the uptake and assimilation of carbon and nitrogen isotopes into the symbiotic algae, the coral tissue, and the coral skeleton among these two coral species.\n\ncdm_data_type = Other\nVARIABLES:\nLocation_Name (unitless)\nlongitude (degrees_east)\nlatitude (degrees_north)\nSpecies (unitless)\nSym (unitless)\nTreatment (unitless)\nDate (unitless)\nDay (unitless)\nColony (unitless)\na_13catom (percent (%))\nh_13catom (percent (%))\ns_13catom (percent (%))\na_15natom (percent (%))\nh_15natom (percent (%))\n BCO-DMO bcodmo_dataset_948025_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_768138 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_768138/ public [Palau lakes: invertebrate barcodes] - Specimen log with OTU identifiers collected from Palau marine lakes (Do Parallel Patterns Arise from Parallel Processes?) List of all barcoded specimens of collected invertebrates with sequence name and OTU identifier collected from Palau marine lakes. FASTA files for major invertebrate groups are included in supplemental files.\n\ncdm_data_type = Other\nVARIABLES:\nOTU_id (unitless)\nID (unitless)\nlake_code (unitless)\nSequenceName (Sequence Name, unitless)\nPhylum (unitless)\nClass (unitless)\nOrder (unitless)\nFamily (unitless)\nGenus (unitless)\nSpecies (unitless)\nCRRF_ID (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_768138/index.htmlTable https://www.bco-dmo.org/dataset/768138 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_768138.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_768138&showErrors=false&email= BCO-DMO bcodmo_dataset_768138
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_768196 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_768196/ public [Palau lakes: voucher summary] - Voucher summary of invertebrates and barcoded OTU's with field identifications, collected from Palau marine lakes (Do Parallel Patterns Arise from Parallel Processes?) Voucher summary of invertebrates and barcoded OTU's with field identifications, collected from Palau marine lakes.\n\ncdm_data_type = Other\nVARIABLES:\nCRRF_ID (unitless)\nPhylum (unitless)\nClass (unitless)\nOrder (unitless)\nFamily (unitless)\nGenus (unitless)\nSpecies (unitless)\nID_name (unitless)\nOTU_id (specimens)\nlake_code (unitless)\ncomment (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_768196/index.htmlTable https://www.bco-dmo.org/dataset/768196 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_768196.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_768196&showErrors=false&email= BCO-DMO bcodmo_dataset_768196
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_914002_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_914002_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_914002_v1/ public [Phenotypic plasticity of the ciliated band of early echinoderm larvae] - Phenotypic plasticity of the ciliated band of seven species of echinoderm larvae, collected between 2020 and 2022 in the laboratory at California State University, Long Beach. (RUI: Effects of large inedible particles on larval feeding, planktonic larval duration, and juvenile quality in marine invertebrates) This experiment assesses phenotypic plasticity of the ciliated band. This dataset contains estimates of the ciliated band generated by both direct measurement and by tracing of the band for non-pluteus larvae, used in evaluation of tracing as a proxy for direct measurement. The data was collected between 2020 and 2022 in the laboratory at California State University, Long Beach.\n\ncdm_data_type = Other\nVARIABLES:\nForm (unitless)\nSpecies (unitless)\nAge (days)\nDev (unitless)\nTreatment (unitless)\nFamily (unitless)\nLarva (unitless)\ncbl (mm)\nbl (mm)\nsl (mm)\nsw (mm)\nsgmean (mm)\nmpo (mm)\npo1 (mm)\npo2 (mm)\nmouth (mm)\ntrace1 (mm)\ntrace2 (mm)\ntrace_full (mm)\ngeospatial_bound_N (degrees_north)\ngeospatial_bound_S (degrees_north)\ngeospatial_bound_E (degrees_east)\ngeospatial_bound_W (degrees_east)\nexperiment_location_lat (degrees_north)\nexperiment_location_long (degrees_east)\nexperiment_start (unitless)\nexperiment_end (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_914002_v1/index.htmlTable https://www.bco-dmo.org/dataset/914002 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_914002_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_914002_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_914002_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_904962_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_904962_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_904962_v1/ public [Physiology of Montipora capitata and Porites compressa in response to marine heatwaves] - Physiology of Montipora capitata and Porites compressa from October 2019 to September 2022 in response to marine heatwaves (2015 and 2019) in Hawaiʻi (RAPID: Collaborative Research: Disentangling the effects of heat stress versus bleaching phenotype on coral performance) Increasingly frequent marine heatwaves are devastating coral reefs. Corals that survive these extreme events must rapidly recover if they are to withstand subsequent events, and long-term survival in the face of rising ocean temperatures may hinge on recovery capacity and acclimatory gains in heat tolerance over an individual's lifespan. To better understand coral recovery trajectories in the face of successive marine heatwaves, we monitored the responses of bleaching-susceptible and bleaching-resistant individuals of two dominant coral species in Hawaiʻi, Montipora capitata and Porites compressa, over a decade that included three marine heatwaves. This dataset includes all of the physiological data for both species from October 2019 to September 2022.\n\ncdm_data_type = Other\nVARIABLES:\nCoral_ID (unitless)\nSpecies (unitless)\nBleach (unitless)\nDate (unitless)\nPeriod (unitless)\nMonths (unitless)\nProtein (micrograms per centimeter squared  (mg cm-2))\nSym_density (10^-6 cells per centimeter squared (10-6 cells cm-2))\nChl (micrograms per centimeter squared (ug cm-2))\nCaCO3 (grams ler milliliter (g mL-1))\ninternal_volume_percent (percent (%))\nTAC_CRE (uM copper reducing equivalents (CRE) mg protein-1)\nug_Chl_a_per_zoox (micrograms per cell (ug cell-1))\npg_Chl_a_per_zoox (picograms per cell (ug cell-1))\nCitrate_synthase (citrate synthase mg protein-1)\nAFDW (milligrams per centimeter squared (mg cm-2))\nEndolithic (unitless)\nPPO (change in absorbance minute-1 mg protein-1)\nMelanin_per_tissue (unitless)\n... (4 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_904962_v1/index.htmlTable https://www.bco-dmo.org/dataset/904962 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_904962_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_904962_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_904962_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_747394 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_747394.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_747394/ public [Planktic foraminifer shell d15N from core-top sediments] - Planktic foraminifer shell d15N from core-top sediments from the Sargasso Sea (Understanding the nitrogen isotopes of planktonic foraminifera: A modern Sargasso Sea study) Planktic foraminifer shell d15N from core-top sediments (off Bermuda) in the western subtropical North Atlantic. Core-top sediments from 4570 m water depth (31\\u00b044\\u2019N, 64\\u00b005\\u2019W).\n\ncdm_data_type = Other\nVARIABLES:\nspecies (unitless)\nd15N (D15 N, per mil vs AIR)\nTotal_N (nmol)\nweight (mg)\nN_content (nmol/mg)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_747394/index.htmlTable https://www.bco-dmo.org/dataset/747394 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_747394.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_747394&showErrors=false&email= BCO-DMO bcodmo_dataset_747394
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_747279 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_747279.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_747279/ public [Planktic foraminifer shell d15N from net tows] - Planktic foraminifer shell d15N from net tows in the Sargasso Sea at BATS and Hydro Station S (Understanding the nitrogen isotopes of planktonic foraminifera: A modern Sargasso Sea study) Planktic foraminifer shell d15N from net tows in the Sargasso Sea (off Bermuda) in the western subtropical North Atlantic. Net tow samples from 0-200 m at BATS (31\\u00b040\\u2019N, 64\\u00b010\\u2019W) and Hydro Station S (32\\u00b010\\u2019N, 64\\u00b034\\u2019W), collectected on R/V Atlantic Explorer cruises HS1178, B274, AE1203, B280, B283, AE1220, B287, B292, B295, B299.\n\ncdm_data_type = Other\nVARIABLES:\nspecies (unitless)\ndate (unitless)\ndepth_category (Depth, meters (m))\nd15N (D15 N, per mil)\nTotal_N (nanomoles (nmol))\nweight (milligrams (mg))\nN_content (nanomoles per milligram (nmol/mg))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_747279/index.htmlTable https://www.bco-dmo.org/dataset/747279 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_747279.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_747279&showErrors=false&email= BCO-DMO bcodmo_dataset_747279
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_747341 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_747341.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_747341/ public [Planktic foraminifer shell d15N from sediment traps] - Planktic foraminifer shell d15N from Oceanic Flux Program (OFP) sediment traps in the Sargasso Sea (Understanding the nitrogen isotopes of planktonic foraminifera: A modern Sargasso Sea study) Planktic foraminifer shell d15N from sediment traps in the Sargasso Sea (off Bermuda) in the western subtropical North Atlantic. Sediment traps from 500 m, 1500 m, and 3200 m water depth (31\\u00b050\\u2019N, 64\\u00b010\\u2019W).\n\ncdm_data_type = Other\nVARIABLES:\nspecies (unitless)\ndate (unitless)\nnum_individuals_500m (unitless)\nnum_individuals_1500m (unitless)\nnum_individuals_3200m (unitless)\nnum_individuals_TOTAL (unitless)\nd15N (D15 N, per mil)\nTotal_N (nanomoles (nmol))\nweight (milligrams (mg))\nN_content (nanomoles per milligram (nmol/mg))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_747341/index.htmlTable https://www.bco-dmo.org/dataset/747341 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_747341.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_747341&showErrors=false&email= BCO-DMO bcodmo_dataset_747341
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_747248 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_747248.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_747248/ public [Planktic foraminifer tissue d15N from net tows] - Planktic foraminifer tissue d15N from net tows in the Sargasso Sea at BATS and Hydro Station S (Understanding the nitrogen isotopes of planktonic foraminifera: A modern Sargasso Sea study) Planktic foraminifer tissue d15N from net tows in the Sargasso Sea (off Bermuda) in the western subtropical North Atlantic. Net tow samples from 0-200 m at BATS (31\\u00b040\\u2019N, 64\\u00b010\\u2019W) and Hydro Station S (32\\u00b010\\u2019N, 64\\u00b034\\u2019W), collectected on R/V Atlantic Explorer cruises HS1178, B274, AE1203, B280, B283, AE1220, B287, B292, B295, B299.\n\ncdm_data_type = Other\nVARIABLES:\nspecies (unitless)\ndate (unitless)\ndepth_category (Depth, meters (m))\nnum_individuals (unitless)\nd15N (D15 N, per mil)\nTotal_N (nanomoles (nmol))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_747248/index.htmlTable https://www.bco-dmo.org/dataset/747248 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_747248.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_747248&showErrors=false&email= BCO-DMO bcodmo_dataset_747248
log in [Pre-experiment Urchin Barren Characterization] -  (CAREER: Energy fluxes and community stability in a dynamic, high-latitude kelp ecosystem) Before experimental manipulation with caged Pycnopodia helianthoides presence, we characterized ambient density, gonad index, and size distributions of urchin communities ( Strongylocentrotus droebachiensis and Mesocentrotus franciscanus) in three replicate urchin barrens in Sitka Sound, AK (57°2'1\"N 135°15'51\"W) from February 11-20, 2023. Via SCUBA we conducted swath surveys where grazers were identified, counted, measured (test diameter), and randomly collected for gonad dissections. These surveys serve as a baseline to describe these sites as true barrens and to compare experimental results to.\n\ncdm_data_type = Other\nVARIABLES:\nlatitude (degrees_north)\nlongitude (Long, degrees_east)\nSite (unitless)\ntime (Iso_datetime, seconds since 1970-01-01T00:00:00Z)\nDate (unitless)\ntime_unitless (Time, unitless)\nDiver (unitless)\nMeter_marks (unitless)\nSpecies (unitless)\nScientific_Name (unitless)\nCount (individual)\nArea_m2 (meters squared (m2))\nDensity_m2 (meters squared (m-2))\nnotes (unitless)\n BCO-DMO bcodmo_dataset_942763_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3923 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3923.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3923/ public [predator surveys Eleuthera] - Size of predators observed during dedicated reef predator searches at Eleuthera, Bahamas in 2012 (Lionfish Invasion project) (Ecological Release and Resistance at Sea: Invasion of Atlantic Coral Reefs by Pacific Lionfish) Size of predators observed during dedicated reef predator searches at Eleuthera, Bahamas in 2012.\n\ncdm_data_type = Other\nVARIABLES:\nsite (text)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndate (unitless)\nspecies (text)\nspecies_code (code)\nsize (cm)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_3923_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3923/index.htmlTable https://www.bco-dmo.org/dataset/3923 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3923.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3923&showErrors=false&email= BCO-DMO bcodmo_dataset_3923
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3929.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3929 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3929.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3929/ public [predator surveys LSI] - Predators observed at reefs near Lee Stocking Island, Bahamas from 2009-2012 (Lionfish Invasion project) (Ecological Release and Resistance at Sea: Invasion of Atlantic Coral Reefs by Pacific Lionfish) Predators observed at reefs near Lee Stocking Island, Bahamas from 2009-2012.\n\ncdm_data_type = Other\nVARIABLES:\nsite (text)\nlat_site (decimal degrees)\nlon_site (Longitude, decimal degrees)\nlocation (text)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndate (unitless)\nsurvey (dimensionless)\nledge_tag (dimensionless)\nspecies (text)\nspecies_code (code)\nlength (cm)\nhunting (Yes/No)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_3929_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3929/index.htmlTable https://www.bco-dmo.org/dataset/3929 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3929.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3929&showErrors=false&email= BCO-DMO bcodmo_dataset_3929
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_665407 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_665407.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_665407/ public [Presence and absence of iron and light-related functional genes] - Presence and absence of iron and light-related functional genes collected on the Gould (LMG1411) cruise in the Western Antarctica Peninsula during 2014 (Polar Transcriptomes project) (Iron and Light Limitation in Ecologically Important Polar Diatoms: Comparative Transcriptomics and Development of Molecular Indicators) Presence and absence of iron and light-related functional genes collected on the Gould (LMG1411) cruise in the Western Antarctica Peninsula during 2014 (Polar Transcriptomes project)\n\ncdm_data_type = Other\nVARIABLES:\nspecies (unitless)\ndescription (unitless)\nprotein (unitless)\nRPKM (unitless)\nevalue (unitless)\nKO_num (unitless)\naccession_link (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_665407/index.htmlTable https://www.bco-dmo.org/dataset/665407 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_665407.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_665407&showErrors=false&email= BCO-DMO bcodmo_dataset_665407
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3766 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3766.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3766/ public [pteropod respiration] - Pteropod respiration rates from NW Atlantic and NE Pacific; OC473 (2011) and NH1208 (2012) (Horizontal and Vertical Distribution of Thecosome Pteropods in Relation to Carbonate Chemistry in the Northwest Atlantic and Northeast Pacific ) Respiration rates of thecosome pteropod exposed to various O2 and CO2 concentrations\n\ncdm_data_type = Other\nVARIABLES:\ncruise_id\nspecies (text)\ntreatment (text)\ntemp (Temperature, Celsius)\ndate_local (unitless)\nstation (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ntow (text)\nweight_g (grams)\nsample_volume (liters)\ntime_elapsed (hours)\nO2_control (micromoles O2)\nO2_expt (micromoles O2)\nO2_respiration (micromoles O2/liter)\nresp_rate (micromoles O2/gram hour)\ncomments_expt (text)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_3766_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3766/index.htmlTable https://www.bco-dmo.org/dataset/3766 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3766.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3766&showErrors=false&email= BCO-DMO bcodmo_dataset_3766
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_489471.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_489471 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_489471.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_489471/ public [pteropod shell dissolution] - Pteropod shell dissolution in natural and high-CO2 environments from samples collected on RRS James Clark Ross cruise JR177 in the Scotia Sea, Southern Ocean from 2007-2008 (An Investigation of the Role of Nutrition in the Coral Calcification Response to Ocean Acidification) This dataset contains data from a study of pteropod shell dissolution on individuals exposed to CO2-enriched seawater. The data include the amount of dissolution as well as the physical and chemical parameters on which carbonate chemistry parameters were calculated.\n\ncdm_data_type = Other\nVARIABLES:\ntreatment (dimensionless)\nincubation_time (days)\nN (dimensionless)\nspecies (dimensionless)\nsal (dimensionless)\ntemp (Temperature, degrees Celsius)\nphosphate (Mass Concentration Of Phosphate In Sea Water, micromoles per kilogram (umol/kg))\nsilicate (Mass Concentration Of Silicate In Sea Water, micromoles per kilogram (umol/kg))\nalk_tot (micromoles per kilogram (umol/kg))\nalk_tot_stdev (micromoles per kilogram (umol/kg))\nDIC (micromoles per kilogram (umol/kg))\nDIC_stdev (micromoles per kilogram (umol/kg))\npH (Sea Water Ph Reported On Total Scale, dimensionless)\npH_stdev (P H Stdev, dimensionless)\npCO2 (P CO2, microatmospheres (uatm))\npCO2_stdev (P CO2 Stdev, microatmospheres (uatm))\nbicarbonate (micromoles per kilogram (umol/kg))\nbicarbonate_stdev (micromoles per kilogram (umol/kg))\ncarbonate (micromoles per kilogram (umol/kg))\ncarbonate_stdev (micromoles per kilogram (umol/kg))\nomega_Arg (dimensionless)\nomega_Arg_stdev (dimensionless)\nnon_diss (percentage (%))\nnon_diss_stdev (percentage (%))\ndiss_rate1 (percentage (%))\n... (5 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_489471/index.htmlTable https://www.bco-dmo.org/dataset/489471 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_489471.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_489471&showErrors=false&email= BCO-DMO bcodmo_dataset_489471
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2792 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2792.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_2792/ public [PULSE zooplankton abundance] - Zooplankton species abundance: Cooperative Long-Term Ecological Monitoring Project (PULSE), Gulf of Maine from the F/V Lady Regena NEC-JR2001-1 from the Gulf of Maine, 1999-2004 (NEC-CoopRes project) (Northeast Consortium: Cooperative Research) Zooplankton species abundance: Cooperative Long-Term Ecological Monitoring Project (PULSE), Gulf of Maine from the F/V Lady Regena NEC-JR2001-1 from the Gulf of Maine, 1999-2004 (NEC-CoopRes project).\n\ncdm_data_type = Other\nVARIABLES:\nyear\nyrday_local (ddd.d)\nmonth_local\nday_local\ntime (Date Local, seconds since 1970-01-01T00:00:00Z)\nstation\nlatitude (degrees_north)\nlongitude (degrees_east)\ncast\ndepth (m)\nvolfilt (cubic meters)\nspecies\nabundance\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_2792_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_2792/index.htmlTable https://www.bco-dmo.org/dataset/2792 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_2792.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_2792&showErrors=false&email= BCO-DMO bcodmo_dataset_2792
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_918220_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_918220_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_918220_v1/ public [qPCR assays] - Results from qPCR assays to quantify the abundance and photochemical performance of symbionts relative to coral cells in three coral species collected from colonies in southeast Florida in April and October 2019 before, during, and after heat stress tests (Collaborative Research: Assessing the changing symbiotic milieu on Caribbean coral reefs under climate change: magnitude, tradeoffs, interventions, and implications) This dataset contains results from assays to quantify the abundance and photochemical performance of Breviolum, Cladocopium, and Durusdinium symbionts relative to coral cells in Montastraea cavernosa, Orbicella faveolata, and Siderastrea siderea corals collected from colonies in southeast Florida in April 2019 and in October 2019, before, during and after aquarium-based experimental heat stress tests. Bulk genomic DNA was extracted from tissue scrapings taken from 2.5cm diameter cores of corals and was used as a template for symbiont genus-specific qPCR assays. The resulting CT values were used to calculate the relative abundance of each symbiont genus within each coral core over the course of the heat stress. The photochemical efficiency of each coral core was also measured periodically throughout heat stress tests using an imaging pulse amplitude modulated (I-PAM) fluorometer. The publication based on these data is Buzzoni, et al. (2023) (DOI: 10.1007/s00338-023-02428-x).\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\nTreatment (unitless)\nCore (unitless)\nCollection_Latitude (degrees_north)\nlongitude (Collection_longitude, degrees_east)\nTimepoint (unitless)\nSym_Host (unitless)\nY2 (unitless)\nPropD (unitless)\nBatch (unitless)\nDate (unitless)\nColony (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_918220_v1/index.htmlTable https://www.bco-dmo.org/dataset/918220 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_918220_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_918220_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_918220_v1
log in [Quadrat counts] - Quadrat species counts and measurements along the Northern Central California coast from 2017 to 2021 (Collaborative Proposal: Selection and Genetic Succession in the Intertidal -- Population Genomics of Pisaster ochraceus During a Wasting Disease Outbreak and its Aftermath) Quadrat species counts and measurements collected concurrently with habitat complexity photos along the Northern Central California coast from 2017 to 2021.\n\ncdm_data_type = Other\nVARIABLES:\nDate (unitless)\nSite_Code (unitless)\nArea_Number (unitless)\nSector (unitless)\nQuadrat_Waypoint (unitless)\nlat (degrees_north)\nlongitude (degrees_east)\nQuadrat_Area (square meters (m^2))\nSpecies (per individual)\nn (per individual)\nTube_Number (unitless)\nPrimary_Measurement_Size (millimeters (mm))\nPrimary_Measurement_description (unitless)\nSecondary_Measurement_Size (millimeters (mm))\nSecondary_Measurement_description (unitless)\nNotes (unitless)\nPhoto_ID (unitless)\n BCO-DMO bcodmo_dataset_751650_v3
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_914147_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_914147_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_914147_v1/ public [Quantification of ciliated band length per unit protein in early echinoderm larvae: biometirc data] - Quantification of ciliated band length per unit protein in early echinoderm larvae (biometirc data), collected between 2020 and 2022 in the laboratory at California State University, Long Beach. (RUI: Effects of large inedible particles on larval feeding, planktonic larval duration, and juvenile quality in marine invertebrates) This experiment compares the ciliated band length to the protein content of eight species of echinoderm larvae. The data was collected between 2020 and 2022 in the laboratory at California State University, Long Beach.\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\nAge (days)\nDev (unitless)\nBeaker (unitless)\nLarva (unitless)\ncbl (mm)\nbl (mm)\nsl (mm)\nsw (mm)\nsa (square millimeter (mm^2))\nmpo (mm)\npo1 (mm)\npo2 (mm)\ngeospatial_bound_N (degrees_north)\ngeospatial_bound_S (degrees_north)\ngeospatial_bound_E (degrees_east)\ngeospatial_bound_W (degrees_east)\nexperiment_location_lat (degrees_north)\nexperiment_location_long (degrees_east)\nexperiment_start (unitless)\nexperiment_end (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_914147_v1/index.htmlTable https://www.bco-dmo.org/dataset/914147 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_914147_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_914147_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_914147_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_914146_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_914146_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_914146_v1/ public [Quantification of ciliated band length per unit protein in early echinoderm larvae: protein data] - Quantification of ciliated band length per unit protein in early echinoderm larvae (protein data), collected between 2020 and 2022 in the laboratory at California State University, Long Beach. (RUI: Effects of large inedible particles on larval feeding, planktonic larval duration, and juvenile quality in marine invertebrates) This experiment compares the ciliated band length to protein content of eight species and the protein content of the larvae. The data was collected between 2020 and 2022 in the laboratory at California State University, Long Beach.\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\nAge (days)\nDev (unitless)\nBeaker (unitless)\nSample (unitless)\nAverage (nanograms (ng))\nsd (unitless)\ngeospatial_bound_N (degrees_north)\ngeospatial_bound_S (degrees_north)\ngeospatial_bound_E (degrees_east)\ngeospatial_bound_W (degrees_east)\nexperiment_location_lat (degrees_north)\nexperiment_location_long (degrees_east)\nexperiment_start (unitless)\nexperiment_end (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_914146_v1/index.htmlTable https://www.bco-dmo.org/dataset/914146 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_914146_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_914146_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_914146_v1
log in [Recruit qPCR data] - qPCR data for Orbicella faveolata recruits throughout a symbiont acquisition laboratory experiment conducted in 2018 and 2019 (Collaborative Research: Assessing the changing symbiotic milieu on Caribbean coral reefs under climate change: magnitude, tradeoffs, interventions, and implications) qPCR data for Orbicella faveolata recruits throughout symbiont acquisition laboratory experiment. Includes proportion of different Symbiodinaceae genera hosted, and symbiont-to-host cell ratios (symbiont density).  \n\nThese data correspond to research presented in Williamson et al. (2021), published in Coral Reefs and funded in part by the NSF project \"Symbiont Shifts on Reefs\". They were used to test if Orbicella faveolata recruits could establish symbiosis with D. trenchii supplied by nearby “donor” colonies and examined the resulting ecological trade-offs to evaluate early Symbiodiniaceae manipulation as a scalable tool for reef restoration. We exposed aposymbiotic recruits to 29 °C or 31 °C and to fragments of Montastraea cavernosa (containing Cladocopium ITS2 type C3) or Siderastrea siderea (containing D. trenchii). Next, a subset of recruits were exposed to a 60-day heat stress. These data include survivorship and symbiont acquisition rates, symbiont identity and density data (derived using qPCR), polyp area measurements, and scoring of bleaching and survivorship during a heat stress experiment. Overall, proportion of D. trenchii hosted was negatively correlated with polyp size and symbiont density, indicating a trade-off between growth (of both host and symbiont) and heat tolerance. These findings suggest that, while donor colonies may be effective sources for seeding coral recruits with thermotolerant symbionts, practitioners will need to balance the likely benefits and costs of these approaches when designing restoration strategies.\n\ncdm_data_type = Other\nVARIABLES:\nSample (unitless)\ntank (unitless)\ntemp (unitless)\nadult (unitless)\ndays (days)\nCoral_CT_mean (unitless)\nA_CT_mean (unitless)\nB_CT_mean (unitless)\nC_CT_mean (unitless)\n... (15 more variables)\n BCO-DMO bcodmo_dataset_920860_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_518508 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_518508.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_518508/ public [Remineralization Experiments] - Experimental results: Remineralization experiments to assess the ability of natural assemblages of bacteria to utilize DOM produced under Si and N limitation (SBDOM project, SBC LTER project) (Mechanisms controlling the production and fate of DOM during diatom blooms) Culture studies of diatoms that dominate spring blooms in the Santa Barbara Channel were used to examine the effects of N and Si stress on the magnitude of production and the chemical composition of DOM (see the BIB Experiments dataset). The ability of natural assemblages of bacteria to utilize DOM produced under Si and N limitation was then assessed using remineralization experiments. Species examined in the remineralization experiments include: Skeletonema marinoi, Chaetoceros socialis, Thalassiosira weissflogii, and Odontella aurita.\n\ncdm_data_type = Other\nVARIABLES:\nspecies (text)\ntreatment (text)\nreplicate (integer)\ntime_point (integer)\ndays_elapsed (number)\nDOC (micromoles per Liter (umol/L))\nDOC_sd (micromoles per Liter (umol/L))\nTDN (micromoles per Liter (umol/L))\nTDN_sd (micromoles per Liter (umol/L))\nNO3_NO2 (micromoles per Liter (umol/L))\nNH4 (micromoles per Liter (umol/L))\nPO4 (Mass Concentration Of Phosphate In Sea Water, micromoles per Liter (umol/L))\ndSi (D Si, micromoles per Liter (umol/L))\nbact_abund_FCM (cells per Liter (cells/L))\nbact_abund_DAPI (cells per Liter (cells/L))\nbact_abund_DAPI_sd (cells per Liter (cells/L))\nbact_prod (picomoles Leucine per Liter per hour (pmol Leu/L/hr))\nbact_prod_sd (picomoles Leucine per Liter per hour (pmol Leu/L/hr))\nspecifc_growth_rate (per day)\nbact_growth_eff (unitless)\nDNA_sampled (yes or no)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_518508/index.htmlTable https://www.bco-dmo.org/dataset/518508 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_518508.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_518508&showErrors=false&email= BCO-DMO bcodmo_dataset_518508
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2370 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2370.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_2370/ public [respiration-excretion rates - fish] - Mean respiration and excretion rates for fish from ARSV Laurence M. Gould and RVIB Nathaniel B. Palmer cruises LMG0104, LMG0203, and NBP0204 in the Southern Ocean from 2001-2002 (SOGLOBEC project) (U.S. GLOBEC Southern Ocean) Mean respiration and excretion rates for fish from ARSV Laurence M. Gould and RVIB Nathaniel B. Palmer cruises LMG0104, LMG0203, and NBP0204 in the Southern Ocean from 2001-2002 (SOGLOBEC project)\n\ncdm_data_type = Other\nVARIABLES:\nspecies (text)\nseason (text)\nsize_class (unitless)\nnumber (integer)\nWetMass (Wet Mass, mg)\nWetMass_stdev (Wet Mass Stdev, mg)\nH2O (H2 O, percent)\nH2O_stdev (H2 O Stdev, percent)\nAsh (percent)\nAsh_stdev (percent)\nO2_consumed (uL O2 per individual per hour)\nO2_consumed_stdev (uL O2 per individual per hour)\nVO2 (uL O2 per mg wet weight per hr)\nVO2_stdev (uL O2 per mg wet weight per hr)\nN_excrete (ug per individual per hour)\nN_excrete_stdev (ug per individual per hour)\nN_excrete_mass (ug N per mg wet mass per hour)\nN_excrete_mass_stdev (ug N per mg wet mass per hour)\nOtoN (Oto N, unitless)\nOtoN_stdev (Oto N Stdev, unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_2370/index.htmlTable https://www.bco-dmo.org/dataset/2370 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_2370.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_2370&showErrors=false&email= BCO-DMO bcodmo_dataset_2370
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2369 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2369.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_2369/ public [respiration-excretion rates - micronekton] - Mean respiration and excretion rates for micronekton from ARSV Laurence M. Gould and RVIB Nathaniel B. Palmer cruises LMG0104, LMG0203, NBP0104, and NBP0204 in the Southern Ocean from 2001-2002 (SOGLOBEC project) (U.S. GLOBEC Southern Ocean) Mean respiration and excretion rates for micronekton from ARSV Laurence M. Gould and RVIB Nathaniel B. Palmer cruises LMG0104, LMG0203, NBP0104, and NBP0204 in the Southern Ocean from 2001-2002 (SOGLOBEC project)\n\ncdm_data_type = Other\nVARIABLES:\nspecies (text)\nseason (text)\nnumber (integer)\nsize_class (unitless)\nWetMass (Wet Mass, mg)\nWetMass_stdev (Wet Mass Stdev, mg)\nH2O (H2 O, percent)\nH2O_stdev (H2 O Stdev, percent)\nAsh (percent)\nAsh_stdev (percent)\nO2_consumed (uL O2 per individual per hour)\nO2_consumed_stdev (uL O2 per individual per hour)\nVO2 (uL O2 per mg wet weight per hr)\nVO2_stdev (uL O2 per mg wet weight per hr)\nN_excrete (ug per individual per hour)\nN_excrete_stdev (ug per individual per hour)\nN_excrete_mass (ug N per mg wet mass per hour)\nN_excrete_mass_stdev (ug N per mg wet mass per hour)\nOtoN (Oto N, unitless)\nOtoN_stdev (Oto N Stdev, unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_2369/index.htmlTable https://www.bco-dmo.org/dataset/2369 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_2369.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_2369&showErrors=false&email= BCO-DMO bcodmo_dataset_2369
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2371 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2371.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_2371/ public [respiration-excretion rates - plankton] - Mean respiration and excretion rates for plankton from ARSV Laurence M. Gould and RVIB Nathaniel B. Palmer cruises LMG0104, LMG0203, NBP0104, and NBP0204 in the Southern Ocean from 2001-2002 (SOGLOBEC project) (U.S. GLOBEC Southern Ocean) Mean respiration and excretion rates for plankton from ARSV Laurence M. Gould and RVIB Nathaniel B. Palmer cruises LMG0104, LMG0203, NBP0104, and NBP0204 in the Southern Ocean from 2001-2002 (SOGLOBEC project)\n\ncdm_data_type = Other\nVARIABLES:\nspecies (text)\nseason (text)\nstage (unitless)\nnumber (integer)\nWetMass_mg (Wet Mass Mg, mg)\nWetMass_stdev (Wet Mass Stdev, mg)\nH2O (H2 O, percent)\nH2O_stdev (H2 O Stdev, percent)\nAsh (percent)\nAsh_stdev (percent)\nO2_consumed (uL O2 per individual per hour)\nO2_consumed_stdev (uL O2 per individual per hour)\nVO2 (uL O2 per mg wet weight per hr)\nVO2_stdev (uL O2 per mg wet weight per hr)\nN_excrete (ug per individual per hour)\nN_excrete_stdev (ug per individual per hour)\nN_excrete_mass (ug N per mg wet mass per hour)\nN_excrete_mass_stdev (ug N per mg wet mass per hour)\nOtoN (Oto N, unitless)\nOtoN_stdev (Oto N Stdev, unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_2371/index.htmlTable https://www.bco-dmo.org/dataset/2371 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_2371.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_2371&showErrors=false&email= BCO-DMO bcodmo_dataset_2371
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_779540 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_779540.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_779540/ public [Retinal Response] - Retinal responses during exposure to decreasing oxygen partial pressure (pO2) (Vision-mediated influence of low oxygen on the physiology and ecology  of marine larvae) Retinal responses during exposure to decreasing oxygen partial pressure (pO2) in marine invertebrate larvae determined with electroretinograms.\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\nExperiment_Name (unitless)\nRound (unitless)\nO2_umol_l (micromole per liter (umol/L))\nO2_ml_l (milliliter per liter (ml/l))\nO2_umol_kg (micromole per kg (umol/kg))\nO2_pO2 (O2 P O2, kiloPascal (kPa))\nn_ctrl_area (unitless)\nRunningAvg (Running Avg, unitless)\nRunAvgLine (Run Avg Line, unitless)\nCondition (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_779540/index.htmlTable https://www.bco-dmo.org/dataset/779540 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_779540.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_779540&showErrors=false&email= BCO-DMO bcodmo_dataset_779540
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_809321 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_809321.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_809321/ public [Rockfish hypoxia experiments] - Data from experiments testing the effects of hypoxia on behavior and physiology of two species of rockfish from from 2015-2016 (Collaborative Research: Ocean Acidification: RUI: Multiple Stressor Effects of Ocean Acidification and Hypoxia on Behavior, Physiology, and Gene Expression of Temperate Reef Fishes) This study investigated the effects of hypoxia on the behavior and physiology of juvenile rockfishes in a controlled laboratory setting to test how deoxygenation may impact early life stages of common temperate reef fishes. Juvenile rockfishes were collected from shallow rocky reef and kelp forest habitats at Stillwater Cove, central California (36\\u02da 34' N, 121\\u02da 56' W) during May-June of 2015. Newly settled copper (Sebastes caurinus) and blue (Sebastes mystinus) rockfish were reared in the laboratory under across a range of oxygen concentrations. Juvenile rockfishes were exposed to one of four dissolved oxygen treatment levels corresponding to conditions that currently occur or are predicted to occur in the future on the central California coast: 100% saturation (8.74 \\u00b1 0.03 mg O2 L-1), 68% saturation (6.00 \\u00b1 0.04 mg O2 L-1), 46% saturation (4.06 \\u00b1 0.04 mg O2 L-1), or 26% saturation (2.25 \\u00b1 0.05 mg O2 L-1), with two replicate tanks per treatment level. Behavior and physiological trials were conducted on each individual to test how each species responds to declining oxygen levels, including (1) escape response, (2) behavioral lateralization, (3) standard metabolic rate, (4) maximum metabolic rate, (5) aerobic scope, (6) pCrit (i.e., hypoxia tolerance test), and (7) ventilation rate. These data are published in Mattiasen et al. (2020).\n\ncdm_data_type = Other\nVARIABLES:\nFish_ID (unitless)\nSpecies (unitless)\nOxygen_treatment_mg_per_L (milligrams O2 per liter (mg/L))\nTank_Replicate (unitless)\nInitial_Standard_Length_mm (millimeters (mm))\nInitial_Total_Length_mm (millimeters (mm))\nInitial_Weight_g (grams (g))\nDate_entered_into_experimental_treatments (unitless)\nDate_at_end_of_experiment (unitless)\nFinal_Standard_Length_mm (millimeters (mm))\nFinal_Total_Length_mm (millimeters (mm))\nFinal_Weight_g (grams (g))\nEscape_Time_seconds (seconds)\n... (7 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_809321/index.htmlTable https://www.bco-dmo.org/dataset/809321 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_809321.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_809321&showErrors=false&email= BCO-DMO bcodmo_dataset_809321
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3109.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3109 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3109.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3109/ public [salmon_hauldata] - Haul data and salmon numbers caught and processed from F/V Great Pacific, R/V Miller Freeman cruises in the Coastal Gulf of Alaska, NE Pacific, 2001-2004 (NEP project) (U.S. GLOBEC Northeast Pacific) Haul data and salmon numbers caught and processed from F/V Great Pacific, R/V Miller Freeman cruises in the Coastal Gulf of Alaska, NE Pacific, 2001-2004.\n\ncdm_data_type = Other\nVARIABLES:\ncruiseid (dimensionless)\nyear (dimensionless)\nhaul_id (dimensionless)\nsta_id (dimensionless)\nmonth_local (dimensionless)\nday_local (dimensionless)\nyrday_local (dimensionless)\ntransect (dimensionless)\ntime_start_local (dimensionless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndistance_start (nautical miles)\ndepth_w_start (Depth, meters)\ntemp_start (degrees Celsius)\ntime_end_local (dimensionless)\nlat_end (Latitude, decimal degrees)\nlon_end (Longitude, decimal degrees)\ndist_end (nautical miles)\ndepth_w_end (Depth, meters)\ntemp_end (degrees Celsius)\nspeed_kn (knots (nautical miles per hour))\nhabitat (dimensionless)\nbongo_flag (dimensionless)\ntucker_flag (dimensionless)\nctd_flag (dimensionless)\nsea_state (dimensionless)\n... (13 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_3109_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3109/index.htmlTable https://www.bco-dmo.org/dataset/3109 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3109.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3109&showErrors=false&email= BCO-DMO bcodmo_dataset_3109
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3030 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3030.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3030/ public [salmon_juv_diet] - Juvenile salmon diet from F/V Great Pacific, R/V Miller Freeman GP0108, GP0207-01, MF0310 in the Coastal Gulf of Alaska, Northeast Pacific from 2001-2003 (NEP project) (U.S. GLOBEC Northeast Pacific) Juvenile salmon diet from F/V Great Pacific, R/V Miller Freeman GP0108, GP0207-01, MF0310 in the Coastal Gulf of Alaska, Northeast Pacific from 2001-2003.\n\ncdm_data_type = Other\nVARIABLES:\nyear (unitless)\ncruiseid (unitless)\nhaul_id (unitless)\nsta_id (unitless)\nmonth_local (unitless)\nday_local (unitless)\ntime_start_local (HHMM)\nyrday_local (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndistance_start (nautical miles)\ndepth (m)\ntemp_start (degrees Celsius)\ntime_end_local (HHMM)\nlat_end (Latitude, decimal degrees)\nlon_end (Longitude, decimal degrees)\ndistance_end (unitless)\ndepth_end (Depth, meters)\ntemp_end (degrees Celsius)\nhabitat (unitless)\ncontrol_id (unitless)\nweight_wet (grams)\nsex (M or F)\nname_common (unitless)\nspecies (Genus and Species)\npred_stom_wgt (grams)\n... (8 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_3030_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3030/index.htmlTable https://www.bco-dmo.org/dataset/3030 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3030.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3030&showErrors=false&email= BCO-DMO bcodmo_dataset_3030
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3016 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3016.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3016/ public [salmon_thermal] - Salmon otoliths - hatchery thermal marks from F/V Great Pacific, R/V Miller Freeman multiple cruises in the Coastal Gulf of Alaska, NE Pacific from 2001-2004 (NEP project) (U.S. GLOBEC Northeast Pacific) Salmon otoliths - hatchery thermal marks from F/V Great Pacific, R/V Miller Freeman multiple cruises in the Coastal Gulf of Alaska, NE Pacific from 2001-2004.\n\ncdm_data_type = Other\nVARIABLES:\ncruiseid (unitless)\nyear (unitless)\nhaul_id (unitless)\nsta_id (unitless)\nmonth_local (unitless)\nday_local (unitless)\ntime_start_local (unitless)\nyrday_local (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndistance_start (nautical miles)\ndepth (m)\ntemp_start (degrees Celsius)\ntime_end_local (unitless)\nlat_end (Latitude, decimal degrees)\nlon_end (Longitude, decimal degrees)\ndepth_end (Depth, meters)\ntemp_end (degrees Celsius)\nhabitat (unitless)\ncontrol_id (unitless)\nage (unitless)\nspecies (unitless)\nhatchery_id (unitless)\nhatchery_special_id (unitless)\nfwage (years)\nbrood_year (unitless)\ncomments_thermal_mark_or_haul_info (unitless)\ncomments_hatchery (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_3016_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3016/index.htmlTable https://www.bco-dmo.org/dataset/3016 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3016.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3016&showErrors=false&email= BCO-DMO bcodmo_dataset_3016
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_749958.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_749958 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_749958.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_749958/ public [Sand lance morphometrics] - Morphometrics of northern sand lance Ammodytes dubius offspring reared under factorial CO2 x temperature conditions (Sensitivity of larval and juvenile sand lance Ammodytes dubius on Stellwagen Bank to predicted ocean warming, acidification, and deoxygenation) Morphometric source data of 2016-2018 experimental work on the sensitivity of northern sand lance (A. dubius) offspring to combined ocean warming and acidification.\n\ncdm_data_type = Other\nVARIABLES:\ntrial (unitless)\nspecies (unitless)\nadult_collection_site (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ntank (unitless)\nreplicate (unitless)\ntemperature (degrees Celsius)\npH (Sea Water Ph Reported On Total Scale, pH NBS)\npCO2 (P CO2, uatm)\nfertilization_date (unitless)\nsample_date (unitless)\nage (days)\nsample_type (unitless)\nSL (millimeters (mm))\nSA (millimeters squared (mm^2))\nYSA (millimeters squared (mm^2))\nOGA (millimeters squared (mm^2))\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_749958_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_749958/index.htmlTable https://www.bco-dmo.org/dataset/749958 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_749958.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_749958&showErrors=false&email= BCO-DMO bcodmo_dataset_749958
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_749429.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_749429 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_749429.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_749429/ public [Sand lance survival] - Survival of northern sand lance Ammodytes dubius offspring under factorial CO2 x temperature conditions (Sensitivity of larval and juvenile sand lance Ammodytes dubius on Stellwagen Bank to predicted ocean warming, acidification, and deoxygenation) Survival source data of 2016-2018 experimental work on the sensitivity of northern sand lance (A. dubius) offspring to combined ocean warming and acidification.\n\ncdm_data_type = Other\nVARIABLES:\ntrial (unitless)\nspecies (unitless)\nadult_collection_site (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ntank (unitless)\ntemperature (degrees Celsius)\nreplicate (unitless)\npH (Sea Water Ph Reported On Total Scale, pH NBS)\npCO2 (P CO2, uatm)\nfertilization_date (unitless)\ninitial_embryo_count (unitless)\ntotal_hatch (unitless)\npcnt_hatching_success (unitless (percent))\npcnt_larval_survival (unitless (percent))\ngrowth_rate (millimeters per day(mm d-1))\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_749429_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_749429/index.htmlTable https://www.bco-dmo.org/dataset/749429 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_749429.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_749429&showErrors=false&email= BCO-DMO bcodmo_dataset_749429
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_780027 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_780027.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_780027/ public [Seagrass fauna counts] - Fauna species count data from minnow trap sampling within seagrass in Summer 2017 in Back Sound, North Carolina (Collaborative Research: Habitat fragmentation effects on fish diversity at landscape scales: experimental tests of multiple mechanisms) Fauna species count data from minnow trap sampling within seagrass in Summer 2017 in Back Sound, North Carolina.\n\ncdm_data_type = Other\nVARIABLES:\nDate (unitless)\nSiteID (Site ID, unitless)\nC_F (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nMinnowTrap_Num (Minnow Trap Num, unitless)\nSpecies (unitless)\nScientific_name (unitless)\nSpecies_Num (per individual)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_780027_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_780027/index.htmlTable https://www.bco-dmo.org/dataset/780027 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_780027.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_780027&showErrors=false&email= BCO-DMO bcodmo_dataset_780027
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3817 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3817.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3817/ public [seal_prey_species_counts] - Counts of prey species found in harbor seal scat samples collected in the San Juan Islands from 2005-2008 (Seal_response_to_prey project) (Responses of Seals and Sea Lions to Increased Rockfish Density) Counts of prey species found in harbor seal scat samples collected in the San Juan Islands from 2005-2008.\n\ncdm_data_type = Other\nVARIABLES:\nspecies (text)\ncommon_name (text)\nfamily (text)\nseason (text)\ncount (integer)\npcnt_unweighted (%)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3817/index.htmlTable https://www.bco-dmo.org/dataset/3817 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3817.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3817&showErrors=false&email= BCO-DMO bcodmo_dataset_3817
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_947067_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_947067_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_947067_v1/ public [Seasonal fatty acid profiles of marine algae and invertebrates from Sitka Sound, Alaska in 2019] - Seasonal fatty acid profiles of marine algae and invertebrates from Sitka Sound, Alaska in 2019 (CAREER: Energy fluxes and community stability in a dynamic, high-latitude kelp ecosystem) These data include fatty acid compositions of select marine macroalgae and macroinvertebrate grazers collected in Sitka Sound, Alaska in January 2019 and July 2019. Samples were collected using SCUBA at three sites, all within 6 km of each other in Sitka Sound: Harris Island (N 57.03165, W 135.27754), Breast Island (N 57.03896, W 135.33309), and Samsing Pinnacle (N 56.98750, W 135.35718). Sampled species included six seaweeds, including three Laminarian kelps (Ochrophyta) and three red algae from the Gigartinales and Ceramiales, that are present in both seasons in these sites: Neoagarum fimbriatum, Macrocystis pyrifera, Hedophyllum nigripes, Cryptopleura ruprechtiana, Opuntiella californica, and Osmundia spectabilis. They also include six macro-invertebrates (two each of gastropods, crustaceans, echinoderms) that are present and dominant herbivores in these sites: Haliotis kamtschatkana, Tegula pulligo, Pentidotea resecata, Pugettia producta, Mesocentrotus franciscanus, and Strongylocentrotus droebachiensis. \nUnderstanding seasonal variation in fatty acid trophic biomarkers between dominant macrophyte resources and their benthic herbivores can help reveal how producers and their primary consumers may respond to future environmental change. These unique data from a high latitude kelp forest ecosystem were collected by a collaborative team of marine ecologists: Dr. Reyn Yoshioka, Dr. Aaron Galloway, Dr. Julie Schram, Dr. Kristy Kroeker, and Dr. Lauren Bell.\n\ncdm_data_type = Other\nVARIABLES:\nsampleID (unitless)\nseason (unitless)\nsite (unitless)\nYear_Month (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nspCode (unitless)\ntype (unitless)\ngenus (unitless)\nspecies (unitless)\nLSID (unitless)\nlengthDia_comment (unitless)\n... (65 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_947067_v1_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_947067_v1_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_947067_v1/index.htmlTable https://www.bco-dmo.org/dataset/947067 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_947067_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_947067_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_947067_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_740414.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_740414 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_740414.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_740414/ public [Settling response of sand dollar D.excentricus to turbulence (BMC Zoology)] - Experimental results of turbulence-exposed sand dollar Dendraster excentricus larvae and their response to a variety of settlement cues (Turbulence-spurred settlement: Deciphering a newly recognized class of larval response) Experimental results of turbulence-exposed sand dollar Dendraster excentricus larvae and their response to a variety of settlement cues.\n\ncdm_data_type = Other\nVARIABLES:\nfigure (unitless)\ncompetence (unitless)\ndate_expt (unitless)\nspecies (unitless)\nrpm (rotations per minute)\nreplicate (unitless)\ndpf (days)\ncue (unitless)\nnumber_larvae (larvae)\nnumber_settled (larvae)\nnumber_settled_0hr (larvae)\nnumber_settled_1hr (larvae)\nnumber_settled_16hr (larvae)\nnumber_on_bottom (larvae)\nnumber_settled_1_5hr (larvae)\nnumber_settled_8hr (larvae)\nnumber_settled_18hr (larvae)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_740414/index.htmlTable https://www.bco-dmo.org/dataset/740414 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_740414.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_740414&showErrors=false&email= BCO-DMO bcodmo_dataset_740414
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_925664_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_925664_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_925664_v1/ public [Shell dissolution data for Mytilus californianus] - Shell dissolution data for Mytilus californianus from March to July 2020 (OA decoupling project) (Invertebrate calcification and behavior in seawater of decoupled carbonate chemistry) This dataset supports the main incubation data. These data document shell dissolution rates for Mytilus californianus which were used to convert net calcification rates of mussels into gross calcification rates.\n\ncdm_data_type = Other\nVARIABLES:\nspecies (unitless)\nAphiaID (unitless)\nLSID (unitless)\nmodule (unitless)\ndatetime_local (unitless)\nstart_time_local (unitless)\nISO_Start_DateTime_UTC (unitless)\nduration (hours)\nsalinity (PSU)\ntemperature (degrees Celcius)\nshell_mass (grams (g))\nTA (umol kg-1)\nph (unitless)\nhco3 (umol kg-1)\nco3 (umol kg-1)\nomega (unitless)\nco2 (umol kg-1)\npco2 (uatm)\ndic (umol kg-1)\nincubation_water_mass (kilograms (kg))\ndelta_ta (umol kg-1)\ndiss_rate (umol hr-1 g-1)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_925664_v1/index.htmlTable https://www.bco-dmo.org/dataset/925664 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_925664_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_925664_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_925664_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_926911_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_926911_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_926911_v1/ public [Short-term heat stress assay Heron Island - thermal tolerance comparison between studies] - Thermal tolerance (ED50) data used to compare previously published regional (Florida Reef Tract, Coral Sea, Red Sea) coral thermal tolerance with Heron Island, Great Barrier Reef values measured in 2022 (Influence of environmental pH variability and thermal sensitivity on the resilience of reef-building corals to acidification stress) Variable temperature regimes that expose corals to sub-lethal heat stress have been recognized as a mechanism to increase coral thermal tolerance and lessen coral bleaching. However, there is a need to better understand which thermal regimes maximize coral stress hardening. Here, standardized thermal stress assays were used to determine the relative thermal tolerance of three divergent genera of corals (Acropora, Pocillopora, Porites) originating from six reef sites representing an increasing gradient of annual mean diel temperature fluctuations of 1–3°C day-1. Bleaching severity and dark-acclimated photochemical yield (i.e., Fv/Fm) were quantified following exposure to five temperature treatments ranging from 23.0 to 36.3°C (see Related Datasets).  This data set contains the comparison of thermal tolerance across studies.\n\ncdm_data_type = Other\nVARIABLES:\nLocation (unitless)\nGenus (unitless)\nSpecies (unitless)\nReef (unitless)\ned50 (degrees Celsius (degC))\nLower (degrees Celsius (degC))\nUpper (degrees Celsius (degC))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_926911_v1/index.htmlTable https://www.bco-dmo.org/dataset/926911 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_926911_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_926911_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_926911_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_914723_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_914723_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_914723_v1/ public [Short-term heat stress assay: Photochemical yield data] - Photochemical yield and bleaching severity data from a standardized short-term (18 hour) heat stress assay of Montipora capitata and Porites compressa collected at a patch reef in Kane'ohe Bay, O'ahu, Hawai'i in September of 2022 (RAPID: Collaborative Research: Disentangling the effects of heat stress versus bleaching phenotype on coral performance) Increasingly frequent marine heatwaves are devastating coral reefs. Corals that survive these extreme events must rapidly recover if they are to withstand subsequent events, and long-term survival in the face of rising ocean temperatures may hinge on recovery capacity and acclimatory gains in heat tolerance over an individual's lifespan. To better understand coral recovery trajectories in the face of successive marine heatwaves, we monitored the responses of bleaching-susceptible and bleaching-resistant individuals of two dominant coral species in Hawaiʻi, Montipora capitata and Porites compressa, over a decade that included three marine heatwaves.  This dataset includes the photochemical yield from the standardized short-term (18 hour) heat stress assay.\n\ncdm_data_type = Other\nVARIABLES:\nTreatment (unitless)\nTemperature (degrees Celcius)\nSpecies (unitless)\nBleach (unitless)\nColony_ID (unitless)\nRep (unitless)\nF (unitless)\nY (unitless)\nM (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_914723_v1/index.htmlTable https://www.bco-dmo.org/dataset/914723 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_914723_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_914723_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_914723_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_662096 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_662096.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_662096/ public [Site locations and species sampled] - Coral species list and site descriptions for studies conducted on the partial SSU rRNA genes of bacteria and archaea in the Florida Keys, Australia, and Micronesia in 2013. (Coral Microbial Relationships project) (Fundamental Coral-Microbial Associations) Coral species list and site descriptions for studies conducted on the partial SSU rRNA genes of bacteria and archaea in the Florida Keys, Australia, and Micronesia in 2013. (Coral Microbial Relationships project)\n\ncdm_data_type = Other\nVARIABLES:\nspecies (unitless)\ncolony_name (unitless)\ncollection_site (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndepth (m)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_662096_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_662096/index.htmlTable https://www.bco-dmo.org/dataset/662096 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_662096.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_662096&showErrors=false&email= BCO-DMO bcodmo_dataset_662096
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_739790 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_739790.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_739790/ public [Snail larvae in turbulence and waves] - Processed data from Particle Imaging Velocimetry (PIV) observations of Tritia trivittata and Tritia obsoleta behavior in various flow tanks (Relative Influence of Turbulence and Waves on Larval Behavior) Dispersing marine larvae can alter their physical transport by swimming vertically or sinking in response to environmental signals. However, it remains unknown whether any signals could enable larvae to navigate over large scales. We tested whether flow-induced larval behaviors vary with adults' physical environments using congeneric snail larvae from the wavy continental shelf (Tritia trivittata) and from turbulent inlets (Tritia obsoleta). This dataset includes observations of larvae in turbulence, in rotating flows dominated by vorticity or strain rates, and in rectilinear wave oscillations. Larval and water motion were observed using near-infrared particle image velocimetry (IR PIV), and analyses identified threshold signals causing larvae to change their direction or magnitude of propulsive force. The two species reacted similarly to turbulence but differently to waves, and their transport patterns would diverge in wavy, offshore regions. Wave-induced behaviors provide evidence that larvae may detect waves as both motions and sounds useful in navigation.\n\ncdm_data_type = Other\nVARIABLES:\nfile_name (unitless)\nlarval_stage (unitless)\nspecies (unitless)\nflow_tank (unitless)\ndirection (unitless)\nx (Longitude, centimeters (cm))\nz (centimeters (cm))\nuf (centimeters per second (cm/s))\nwf (centimeters per second (cm/s))\nub (centimeters per second (cm/s))\nwb (centimeters per second (cm/s))\nlarval_axial_rotation_ang (radians)\nlarval_propulsive_force (N)\npropulsion_direction (radians)\ndissipation_rate (m^2 s^-3)\nhorizontal_comp_of_vorticity (s^-1)\nacceleration (meters per second (m s^-2))\nstrain_rate (s^-1)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_739790/index.htmlTable https://www.bco-dmo.org/dataset/739790 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_739790.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_739790&showErrors=false&email= BCO-DMO bcodmo_dataset_739790
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_805653.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_805653 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_805653.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_805653/ public [Southern Ocean foraminifer N isotopes] - Planktic foraminifer tissue and shell d15N from net tows on R/V S.A. Agulhas II cruises VOY016 and VOY019 in the Southern Ocean south of Africa during 2015-2016 (High-resolution, Assemblage-specific Records of Diatom-bound N Isotopes from the Indian Sector of the Antarctic Ocean) This dataset synthesizes net-tow data (foraminifera and zooplankton measurements) with tow-depth seawater measurements (physical and chemical properties) and surface measurements of bulk suspended particulate organic nitrogen (PON) collected from the underway intake (7 m depth).\n\ncdm_data_type = Other\nVARIABLES:\ncruise (unitless)\nship (unitless)\ntow (unitless)\ndate (unitless)\ntime_starttow (unitless)\ntime_endtow (unitless)\nspecies (unitless)\ntype (unitless)\nanalysis_year (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndepth (m)\nd15N_foram_avg (D15 N Foram Avg, per mil vs AIR)\nd15N_foram_sd (D15 N Foram Sd, per mil vs AIR)\nd15N_foram_n (D15 N Foram N, unitless)\nindiv_avg (unitless)\nindiv_sd (unitless)\nindiv_n (unitless)\nNi_avg (nanomoles per individual (nmol/indiv))\nNi_sd (nanomoles per individual (nmol/indiv))\nNi_n (unitless)\nNw_avg (nanomoles per milligram (nmol/mg))\nNw_sd (nanomoles per milligram (nmol/mg))\nNw_n (unitless)\nd15N_avg_nitrate (Mole Concentration Of Nitrate In Sea Water, per mil vs AIR)\n... (20 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_805653_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_805653/index.htmlTable https://www.bco-dmo.org/dataset/805653 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_805653.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_805653&showErrors=false&email= BCO-DMO bcodmo_dataset_805653
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3896 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3896.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3896/ public [species list] - Names, codes, and characteristics of species observed during reef surveys in the Bahamas (Lionfish Invasion project) (Ecological Release and Resistance at Sea: Invasion of Atlantic Coral Reefs by Pacific Lionfish) Names, codes, and characteristics of species observed during reef surveys in the Bahamas (Lionfish Invasion project).\n\ncdm_data_type = Other\nVARIABLES:\nspecies_code (dimensionless)\nspecies (text)\nname_change (0 or 1)\nspecies_new (text)\ncommon_name (text)\nfamily (text)\ntransient (0 or 1)\npiscivore (0 or 1)\nherbivore (0 or 1)\nmature_lt_5cm (0 or 1)\nobligate_cleaner (0 or 1)\nfaculative_cleaner (0 or 1)\ninvertebrate (0 or 1)\nLW_a (numeric)\nLW_b (numeric)\nLW_c (numeric)\nLW_ref (code)\nspecies_substitute (text)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3896/index.htmlTable https://www.bco-dmo.org/dataset/3896 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3896.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3896&showErrors=false&email= BCO-DMO bcodmo_dataset_3896
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_674172 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_674172.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_674172/ public [Species richness] - Species richness in and out of MPAs in Viti Levu, Fiji from 2010-2012 (Killer Seaweeds project) (Killer Seaweeds: Allelopathy against Fijian Corals) Species richness in and out of MPAs in Viti Levu, Fiji from 2010-2012 (Killer Seaweeds project)\n\ncdm_data_type = Other\nVARIABLES:\ntype (unitless)\nsite (unitless)\nstatus (unitless)\nspecies (count)\nyear (unitless)\nday (unitless)\ntransect (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_674172/index.htmlTable https://www.bco-dmo.org/dataset/674172 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_674172.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_674172&showErrors=false&email= BCO-DMO bcodmo_dataset_674172
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_817436 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_817436.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_817436/ public [Sponge-Associated Microbial Communities (via 16S-V4 rRNA amplicon  sequencing) Following Storm-Driven Flooding] - SRA accessions and collection information for 16S-V4 rRNA amplicon data from invertebrates sampled at Flower Garden Banks National Marine Sanctuary, Gulf of Mexico following Tax Day Flooding (2016), Hurricane Harvey (2017), and a no flooding year (2018) (RAPID: Collaborative Research: Impact of freshwater runoff from Hurricane Harvey on coral reef benthic organisms and associated microbial communities) To document the effects of storm-driven freshwater runoff on\\u00a0sponge-\nassociated microbiomes, we leveraged the heavy rainfall\\u00a0associated with\nTax Day Flooding (July 2016) and Hurricane Harvey\\u00a0(August 2017) to\ncharacterize sponge-associated bacterial communities\\u00a0at five time points:\nin July 2016 (at detection of the mortality\\u00a0event), one month after the\nmortality event (August 2016), immediately\\u00a0after Hurricane Harvey\n(September 2017), one month after Hurricane\\u00a0Harvey (October 2017), and\napproximately one year following Hurricane\\u00a0Harvey (October 2018).\n \nThese data contain Sequence Read Archive (SRA) and BioSample accession numbers\nassociated with BioProject\\u00a0PRJNA605902\n(see\\u00a0[https://www.ncbi.nlm.nih.gov/bioproject/605902](\\\\https://www.ncbi.nlm.nih.gov/bioproject/605902\\\\))\\u00a0at\nThe National Center for Biotechnology Information.\n\ncdm_data_type = Other\nVARIABLES:\nSample_Name (unitless)\nCollection_Date_Start (unitless)\nCollection_Date_End (unitless)\nDepth_min (Depth, meters (m))\ndepth (m)\nBank (unitless)\nSpecies (unitless)\nSRA (unitless)\nAccession (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_817436_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_817436/index.htmlTable https://www.bco-dmo.org/dataset/817436 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_817436.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_817436&showErrors=false&email= BCO-DMO bcodmo_dataset_817436
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_924340_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_924340_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_924340_v1/ public [Squid tag movement data and environmental sampling] - Squid tag movement data and environmental sampling acquired in November 2021 and May 2023 near Faial and Pico Islands, Azores archipelago. (RAPID: Too hot to hold: Effects of unseasonable warming on the Azores nekton community and its keystone taxon) ITAGs were used to measure squid movement dynamics. The sensor package was small (12.5 × 2.6 × 2.7 cm) and was affixed using surgical sutures . Additionally, ITAGs were neutrally buoyant, hydrodynamic, and focal tagged squid exhibited normal swimming and schooling behaviors with other conspecifics. ITAGs contain an inertial measurement unit (IMU) which measures acceleration, magnetic field strength, and angular velocity. These tags were used to measure the swimming behavior or free-ranging animals in the Azores region in November 2021, and May 2023. These data provide movement intensities, behaviors, and allow us to measure the environment including light, temperature, and the animal's depth. Here, we are submitting the tag data from the free-ranging animals in matrix form (.csv).\n\ncdm_data_type = Other\nVARIABLES:\nspecies (unitless)\nyear (unitless)\njulian_day (unitless)\ndate (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nsensor_id (unitless)\ntime_vector (unitless)\nsurge_acceleration (gravities)\nsway_acceleration (gravities)\nheave_acceleration (gravities)\nx_magnetic_field_strength (microTesla)\ny_magnetic_field_strength (microTesla)\nz_magnetic_field_strength (microTesla)\nx_angular_velocity (degress/sec)\ny_angular_velocity (degress/sec)\nz_angular_velocity (degress/sec)\nred_light (micro Watts per cm2)\nblue_light (micro Watts per cm2)\ngreen_light (micro Watts per cm2)\ntemperature (degrees Celsius (°C))\npressure (millibar)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_924340_v1_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_924340_v1_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_924340_v1/index.htmlTable https://www.bco-dmo.org/dataset/924340 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_924340_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_924340_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_924340_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_927507_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_927507_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_927507_v1/ public [Substrate-specific metabolic responses of model marine bacteria using proteomics] - Normalized protein abundance data and protein annotations for proteomic data from laboratory cultures of Ruegeria pomeroyi DSS-3 and Alteromonas macleodii MIT1002 in 2022 (C-CoMP Model Bacteria Physiological Studies) This dataset includes normalized protein abundance data and protein annotations for proteomic data from cultures of Ruegeria pomeroyi DSS-3 and Alteromonas macleodii MIT1002. These model marine bacteria were grown in defined culture media with either glucose, acetate, or a mix of both as carbon substrates. The data are sampled so as to capture the metabolic differences the bacteria employ when catabolizing these different substrates and when switching between them. The raw proteomics files are available on the Proteomics IDEntification Database (PRIDE) under accession PXD045824. The proteomic data accompanies the transcriptomic expression data available at BCO-DMO dataset 916134 (https://www.bco-dmo.org/dataset/916134).\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\nStrain (unitless)\ngene_callers_id (unitless)\nac_mean_abund (unitless)\nglc_mean_abund (unitless)\nlate_mean_abund (unitless)\nearly_mean_abund (unitless)\nSPO_ID_ACCESSION (unitless)\nKOfam_ACCESSION (unitless)\nKEGG_Module (unitless)\nCOG20_FUNCTION (unitless)\nUniprot_accession (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_927507_v1/index.htmlTable https://www.bco-dmo.org/dataset/927507 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_927507_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_927507_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_927507_v1
log in [Subsurface Nitrospirota and Nitrospinota Origins] - Collection of subsurface bacteria Nitrospirota and Nitrospinota genome data including IMG and NCBI accessions for sequence datasets in June 2021 (Slow Life in Crust project) (Microbial activity in the crustal deep biosphere) The phyla Nitrospirota and Nitrospinota have received significant research attention due to their unique mitrogen metabolisms important to biogeochemical and industrial processes. These phyla are common inhabitants of marine and terrestrial subsurface environments and contain members capable of diverse physiologies in addition to nitrite oxidation and complete ammonia oxidation. We used phylogenomics and gene-based analysis with ancestral state reconstruction and gene-tree-species tree reconciliation methods to investigate the life histories of these two phyla. This dataset includes list of previously-published sequence datasets that were used for the analysis. The data and interpretations are published at DOI 10.1038/s41396-023-01397-x. Additional metadata such as NCBI accessions, assembly release dates, and NCBI taxon ids were added in December 2024.\n\ncdm_data_type = Other\nVARIABLES:\nID (unitless)\nIMG_genome_id (unitless)\nGenBank_assembly (unitless)\nSample (unitless)\nCorrected_BioSample (unitless)\nBioProject (unitless)\nrelease_date (unitless)\nlast_updated_date (seconds since 1970-01-01T00:00:00Z)\npublication_date (seconds since 1970-01-01T00:00:00Z)\nDomain (unitless)\nPhylum (unitless)\nClass (unitless)\nOrder (unitless)\nFamily (unitless)\nGenus (unitless)\nSpecies (unitless)\nNCBI_organism_taxid (unitless)\nIsolation_Source (unitless)\nIsolationPlot (unitless)\n... (11 more variables)\n BCO-DMO bcodmo_dataset_933610_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_719420.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_719420 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_719420.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_719420/ public [Survival and size] - Survival, length, and growth responses of M. menidia offspring from different females exposed to contrasting CO2 environments. (Collaborative research: Understanding the effects of acidification and hypoxia within and across generations in a coastal marine fish) Wild-caught M.\\u00a0menidia\\u00a0adults were spawned to test whether offspring\nfrom different mothers differ in their average survival and size responses to\nelevated CO2\\u00a0conditions.\\u00a0The experiment quantified three related\nsurvival and three size traits for each replicate, female, and\nCO2\\u00a0treatment: embryo survival (fertilization to 1\\u00a0dph), larval\nsurvival (1 to 16\\u00a0dph), and overall survival (fertilization to\n16\\u00a0dph); and size (SL) at hatch (1\\u00a0dph), SL at 16\\u00a0dph, and\nlarval growth rate\\u00a0(GR = (SL16dph\\u00a0\\u2013 SL1dph)/15).\n \nThese data are\\u00a0associated with the corresponding paper:\n \n[Snyder, J.T.*, Murray, C.S.*, and Baumann, H. (2017) Potential for maternal\neffects on offspring CO2-sensitivities in a coastal marine fish. Journal of\nExperimental Marine Biology and Ecology (in\npress).](\\\\https://doi.org/10.1016/j.jembe.2017.11.002\\\\)\n \nOther datasets related to this paper:\n \n[Fatty acid profiles of M. menidia females and their unfertilized\neggs.](\\\\https://www.bco-dmo.org/dataset/719379\\\\)\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\nCollection_site (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nCollection_date (unitless)\nFemale (unitless)\nTotal_length (centimeters)\npH (Sea Water Ph Reported On Total Scale, NIST units)\n... (8 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_719420_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_719420/index.htmlTable https://www.bco-dmo.org/dataset/719420 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_719420.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_719420&showErrors=false&email= BCO-DMO bcodmo_dataset_719420
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_739171 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_739171.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_739171/ public [Swimming Endurance] - Ontogeny of swimming endurance of larval Amphiprion percula, Elacatinus lori, and Elacatinus colini from Belize in 2015. (Collaborative Research: The Role of Larval Orientation Behavior in Determining Population Connectivity) Recorded swimming duration of larval Amphiprion percula, Elacatinus lori, and Elacatinus colini measured throughout development from hatching through settlement.\n\ncdm_data_type = Other\nVARIABLES:\ndate (unitless)\nlocation (unitless)\nspecies (unitless)\nbatch_id (unitless)\ndph (days post hatch)\nstand_dph (percent)\nspeed (centimeters per second)\ntime_sec (seconds)\ndist_cm (centimeters)\nTL (milimeters)\nSL (milimeters)\nBD (milimeters)\nPA (milimeters)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_739171/index.htmlTable https://www.bco-dmo.org/dataset/739171 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_739171.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_739171&showErrors=false&email= BCO-DMO bcodmo_dataset_739171
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_732890 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_732890.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_732890/ public [Symbiodinium Fv/Fm over a temperature gradient] - Fv/Fm for cultured Clade A & B Symbiodinium with 2 treatments measured over a range of temperatures (Coevolution of scleractinian corals and their associated microorganisms) Coral photosynthetic endosymbionts (Symbiodinium) are phylogenetically very diverse, yet the extent of inter- and intraspecific functional variation within clades remains largely underexplored. Understanding this variability will be critical for future research on climate change mediated responses. A properly functioning thylakoid membrane is essential for optimal photosynthetic performance both in free-living and in hospite conditions. Here we analyze the thylakoid membrane melting points of 13  Symbiodinium strains from species in Clades B and A, grown at both control (26 \\u00b0C)  and high temperature (31 \\u00b0C). We observed a broad range of responses to thermal stress regardless of taxonomic rank. Our results support and augment a growing body of literature demonstrating that functional differences among Symbiodinium spp. are as distinct at lower taxonomic levels (i.e. interspecific) as they are among major clades. These findings highlight the importance of assessing the variability of plastid traits across the Symbiodinium tree.\n\ncdm_data_type = Other\nVARIABLES:\nStrain (unitless)\nSpecies (unitless)\nTreatment (unitless)\nReplicate (unitless)\nTemperature (degrees Celsius)\nFv_Fm (dimensionless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_732890/index.htmlTable https://www.bco-dmo.org/dataset/732890 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_732890.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_732890&showErrors=false&email= BCO-DMO bcodmo_dataset_732890
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_918841_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_918841_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_918841_v1/ public [T. pseudonana starve-recover experiments: Physiological data] - Diatom (Thalassiosira pseudonana) physiological data from experiments designed to study single-cell transcriptional profiling of nutrient acquisition heterogeneity in diatoms conducted in December of 2022 (EAGER: Diatom Programmed Cell Death at Single-Cell Resolution) This dataset includes physiological data for diatom Thalassiosira pseudonana grown during experiments conducted as part of a study of \"Single-Cell transcriptional profiling of nutrient acquisition heterogeneity in diatoms.\"  See \"Related Datasets\" section for T. pseudonana gene and cell information collected as part of the same study and experiments.\n\n\nStudy description: \n\nDiatoms (Bacillariophyceae) are unicellular photosynthetic algae, accounting for about 40% of total marine primary production (equivalent to terrestrial rainforests) and critical ecological players in the contemporary ocean. Diatoms can form enormous blooms in the ocean that can be seen from space and are the base of food webs in coastal and upwelling systems, support essential fisheries, and are central to the biogeochemical cycling of important nutrients such as carbon and silicon. Over geological time, diatoms have influenced the world's climate by changing the carbon flux into the oceans. \n\nDiatoms have traditionally been studied on a population level. Growth is often measured by the total increase in biomass, and gene expression is analyzed by isolating mRNA from thousands or millions of cells. These methods generate a valuable analysis on the population's average functioning; however, they fail to show how each individual diatom cell contributes to the population phenotype. Bulk transcriptomes confound different stages and variability of cell states in heterogeneous populations. By contrast, single-cell transcriptomics measures gene expression in thousands of individual diatoms providing a quantitative and ultrahigh-resolution picture of transient cell states in population fractions enabling the reconstruction of the various phenotypic trajectories. Thus, the single-cell physiological and molecular parameters analysis allows an unsupervised assessment of cell heterogeneity within a population—a new dimension in diatoms and phytoplankton in general. \n\nIn this dataset, we examine the model diatom Thalassiosira pseudonana clonal cells grown in different nitrogen conditions, at the single cell level when grown in a light: dark cycle (12:12 h). Nitrogen is the major limiting nutrient for primary production and growth in the ocean's surface, specifically for diatoms and the food webs they support. We investigate nutrient limitation, starvation and recovery. We used droplet-based, single-cell transcriptomics to analyze ten samples in two stages.  In the first stage (\"starvation\"), six samples were collected over four days of culture as nutrient levels decreased.  In the second stage (\"recovery\"), four samples were collected over twelve hours after nutrients were replenished.\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\n... (29 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_918841_v1/index.htmlTable https://www.bco-dmo.org/dataset/918841 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_918841_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_918841_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_918841_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_738651 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_738651.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_738651/ public [Table 3 - Hatching success] - Table 3: Calanus finmarchicus and Meganyctiphanes norvegica egg hatching success, 2011-2012 (Ocean Acidification-Category 1- Impact of ocean acidification on survival of early life stages of planktonic copepods in the genus Calanus in the northern) This dataset reports hatching success for eggs of Calanus finmarchicus and Meganyctiphanes norvegica. Average temperature and pH are reported as well as hatching success for each replicate dish of eggs. Results are published in Preziosi et al (2017), Table 3.\n\ncdm_data_type = Other\nVARIABLES:\nEXPERIMENT (#)\nSTARTDATE (unitless)\nSPECIES (name)\nSOURCE (text)\nDURATION (hours)\nTANK (#)\nAVERAGE_TEMP (degrees C)\nAVERAGE_PHTTL (pH units)\nHS1 (percent)\nHS2 (percent)\nHS3 (percent)\nHS4 (percent)\nHS5 (percent)\nHS6 (percent)\nHS7 (percent)\nHS8 (percent)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_738651/index.htmlTable https://www.bco-dmo.org/dataset/738651 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_738651.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_738651&showErrors=false&email= BCO-DMO bcodmo_dataset_738651
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_898012_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_898012_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_898012_v1/ public [Temperature-dependence of juvenile Black sea bass growth and lipid accumulation - Experiment 2] - Temperature-dependence of juvenile Black sea bass growth and lipid accumulation determined through lab experiments conducted from September 2021 to February 2022 at UConn Avery Point (Collaborative research: Understanding the effects of acidification and hypoxia within and across generations in a coastal marine fish) The northern stock of Black sea bass (BSB, Centropristis striata) has greatly expanded over the past decade, potentially due to warming Northwest Atlantic shelf waters affecting overwintering especially in juveniles. To gather better empirical data we quantified winter growth and lipid accumulation in BSB juveniles from Long Island Sound using two complementing experiments. The data from Experiment 2 are presented here.\n\nThe data from Experiment 1 are presented in a related dataset (https://www.bco-dmo.org/dataset/897895). Experiment 2 measured the same traits as Experiment 1 but exposed juveniles to a simulated thermal overwinter profile (October - March) with seasonally varying food rations. Monthly individual length growth (GR) and weight-specific growth (SGR) responded in the direction of seasonal food level changes, showing reduced growth in December-February in a 'Winter dip' treatment, but compensatory growth in a 'Winter pulse' treatment. A 6-month consumption average of 1.7% feeding-1 ('Winter pulse') elicited a mean GR of 0.15 millimeters per day (mm d-1) and SGR of 0.55% d-1, whereas juveniles consuming on average 3.8% per feeding ('Winter dip') had significantly faster GR (0.20 mm d-1) and SGR (0.71% d-1). Growth efficiencies ranged between 15-30% and were inversely related to food consumption.\n\nIn both experiments, juveniles disproportionally accumulated lipid over lean mass, with lipid proportions tripling in Exp2 from 4% at 65 mm to 12% at 120 mm.\n\ncdm_data_type = Other\nVARIABLES:\nSite (unitless)\nlongitude (degrees_east)\nlatitude (degrees_north)\nDate_col (unitless)\nSpecies (unitless)\nTank (unitless)\nBSB_ID (unitless)\nGroup (unitless)\nTreat (unitless)\n... (34 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_898012_v1_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_898012_v1_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_898012_v1/index.htmlTable https://www.bco-dmo.org/dataset/898012 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_898012_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_898012_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_898012_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_907507_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_907507_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_907507_v1/ public [Tissue data from Keister et al. 2023] - Comparative analysis of tissue biomass and energy reserves of six coral species from nearshore and offshore reefs in Palau, Micronesia during March 2017 (Collaborative Research: Stability, flexibility, and functionality of thermally tolerant coral symbioses) The nearshore reef habitats in Palau, Micronesia, serve as a representation of the challenges that coral populations may face in a future with warmer and more acidic oceans. Interestingly, corals inhabiting these nearshore habitats demonstrate a greater ability to withstand and recover from episodes of thermal stress compared to their offshore counterparts. In order to investigate the underlying physiological mechanisms behind this tolerance, we conducted a comparative analysis of six coral species found in both offshore and nearshore environments. Specifically, we examined parameters such as tissue biomass (ash-free dry weight cm−2), energy reserves (including protein, total lipid, and carbohydrate content), as well as several crucial lipid classes.\n\ncdm_data_type = Other\nVARIABLES:\nlatitude (degrees_north)\nlongitude (degrees_east)\nSampleID (unitless)\nSpecies (unitless)\nSite (unitless)\nCollection_Date (unitless)\nAFDW (grams)\nTotal_lipids (joules)\nSurface_Area (squared centimeters (cm^2))\nProtein (joules)\nCarbohydrate (joules)\nWAX (milligrams Ash Free Dry Weight per gram (mg AFDW/g))\nTAG (milligrams Ash Free Dry Weight per gram (mg AFDW/g))\nST (milligrams Ash Free Dry Weight per gram (mg AFDW/g))\nPhospholipids (milligrams Ash Free Dry Weight per gram (mg AFDW/g))\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_907507_v1_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_907507_v1_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_907507_v1/index.htmlTable https://www.bco-dmo.org/dataset/907507 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_907507_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_907507_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_907507_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3667 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3667.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3667/ public [trace_metal_microarray] - Results from trace metal controlled diel microarray experiments with diatoms carried out in the Kustka and Allen labs at Rutgers in Newark, NJ from 2007-2011 (Expression profiling and functional genomics of a pennate diatom: Mechanisms of iron acquisition, stress acclimation, and recovery) Results from trace metal controlled diel microarray experiments with diatoms carried out in the Kustka and Allen labs at Rutgers in Newark, NJ from 2007-2011. Ten diel microarray experiments were completed (seven for P. tricornutum encompassing three Fe concentrations, and three for T. pseudonana encompassing two Fe concentrations).\n\ncdm_data_type = Other\nVARIABLES:\nspecies (dimensionless)\nexp_id (dimensionless)\nfe_prime (pMol)\ngrowth_rate (ln(cell density)/day)\ngrowth_rate_se (dimensionless)\nFv_to_Fm (dimensionless)\nFv_to_Fm_sd (dimensionless)\npH (Sea Water Ph Reported On Total Scale, pH scale)\npH_sd (P H SD, dimensionless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3667/index.htmlTable https://www.bco-dmo.org/dataset/3667 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3667.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3667&showErrors=false&email= BCO-DMO bcodmo_dataset_3667
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_907003_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_907003_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_907003_v1/ public [Tracer data] - Nutrient transfer experiments with host coral and symbionts under varying environmental conditions in March 2014 and March 2015 (Collaborative Research: Stability, flexibility, and functionality of thermally tolerant coral symbioses) Symbiotic mutualisms are essential to ecosystems and numerous species across the tree of life. For reef-building corals, the benefits of their association with endosymbiotic dinoflagellates differ within and across taxa, and nutrient exchange between these partners is influenced by environmental conditions. Furthermore, it is widely assumed that corals associated with symbionts in the genus Durusdinium tolerate high thermal stress at the expense of lower nutrient exchange to support coral growth. We traced both inorganic carbon (H13CO3–) and nitrate (15NO3–) uptake by divergent symbiont species and quantified nutrient transfer to the host coral under normal temperatures as well as in colonies exposed to high thermal stress. Colonies representative of diverse coral taxa associated with Durusdinium trenchii or Cladocopium spp. exhibited similar nutrient exchange under ambient conditions. In contrast, heat-exposed colonies with D. trenchii experienced less physiological stress than conspecifics with Cladocopium spp. while high carbon assimilation and host transfer was maintained. This discovery is different from the prevailing notion that these mutualisms inevitably suffer trade-offs in physiological performance. These findings emphasize that certain host-symbiont combinations adapted to high temperature equatorial environments; and why their increase in prevalence is likely important to the future productivity and stability of coral reef ecosystems.\n\ncdm_data_type = Other\nVARIABLES:\nlatitude (degrees_north)\nlongitude (degrees_east)\nSite (unitless)\nSpecies (unitless)\nSymbiont (unitless)\nTemperature (degrees Celsius)\nReplicate (unitless)\nFraction (unitless)\nAP13C (percent)\nAP15N (percent)\nFv_Fm (unitless)\nDensities (cells per squared centimeter (cells cm-2))\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_907003_v1_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_907003_v1_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_907003_v1/index.htmlTable https://www.bco-dmo.org/dataset/907003 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_907003_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_907003_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_907003_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_665311 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_665311.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_665311/ public [Transcriptome statistics] - Transcriptome statistics from samples obtained on LMG1411 collected on the Gould (LMG1411) in the Western Antarctica Peninsula in 2014. (Polar Transcriptomes project) (Iron and Light Limitation in Ecologically Important Polar Diatoms: Comparative Transcriptomics and Development of Molecular Indicators) Transcriptome statistics from samples obtained on LMG1411 collected on the Gould (LMG1411) in the Western Antarctica Peninsula in 2014. (Polar Transcriptomes project)\n\ncdm_data_type = Other\nVARIABLES:\nspecies (unitless)\nraw_sequence_reads (count)\ncontigs_num (count)\nisogroups_num (count)\ntranscriptome_size (Megabase)\nmean_contig_length (base pair)\nmax_contig_length (base pair)\nmin_contig_length (base pair)\nN50 (unitless)\ncontiguity (unitless)\nBUSCO_pcnt (percent)\nspliceosome_pcnt (percent)\nribosome_pcnt (percent)\nKEGG (count)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_665311/index.htmlTable https://www.bco-dmo.org/dataset/665311 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_665311.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_665311&showErrors=false&email= BCO-DMO bcodmo_dataset_665311
log in [Urchin and Abalone Density Responses] - Urchin and abalone density responses to caged Pycnopodia field experiment in Sitka Sound urchin barrens, February 2023 from from February 2023 (High latitude kelp dynamics project) (CAREER: Energy fluxes and community stability in a dynamic, high-latitude kelp ecosystem) We conducted a field experiment in three replicate sea urchin barrens in Sitka Sound, AK (57°2'1\"N 135°15'51\"W) in February of 2023, where we deployed kelp blades at discrete distances on four meter radial cables from caged adult P. helianthoides and control cages for 24 hours. Via SCUBA we performed quadrat density surveys of three important kelp forest grazers (Haliotis kamtschatkana, Strongylocentrotus droebachiensis, and Mesocentrotus franciscanus) at discrete distances from the cage before, 15-30 min after, and 24 hours after P. helianthoides were added to the treatment cages.\n\ncdm_data_type = Other\nVARIABLES:\nQuadID (unitless)\nRayID (unitless)\nSite (unitless)\nlatitude (degrees_north)\nlongitude (Long, degrees_east)\nTreatment (unitless)\nReplicate (unitless)\nTreatRep (unitless)\nRay (unitless)\nDate (unitless)\nDiver (unitless)\nSurvey (unitless)\nTimePoint (units needed)\nHoursElapsed (hours)\ndepth_f (Depth_ft, feet (ft))\ndepth (Depth_m, m)\nQuad (unitless)\nDist_m (meters (m))\nSpecies (unitless)\nCount (individual)\nDensity_m2 (meters squared (m2))\nNotes (unitless)\n BCO-DMO bcodmo_dataset_942725_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_752795 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_752795.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_752795/ public [Vertebrate home range and body size] - Home range and body size data compiled from the literature for marine and terrestrial vertebrates (Adaptations of fish and fishing communities to rapid climate change) Home range and body size data compiled from the literature for marine and terrestrial vertebrates.\n\ncdm_data_type = Other\nVARIABLES:\nSystem (unitless)\nGroup (unitless)\nSpecies (unitless)\nBM (grams (g))\nHR (square kilometers (km^2))\nRefs (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_752795/index.htmlTable https://www.bco-dmo.org/dataset/752795 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_752795.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_752795&showErrors=false&email= BCO-DMO bcodmo_dataset_752795
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2453.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2453 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2453.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_2453/ public [Vertical Plankton Tow - VPT] - Vertical Plankton Tow (VPT) data from 1997 - 2003 from multiple cruises from the Northeast Pacific, California Current System (NEP project) (U.S. GLOBEC Northeast Pacific) Vertical Plankton Tow (VPT) data from 1997 - 2003 from multiple cruises from the Northeast Pacific, California Current System\n\ncdm_data_type = Other\nVARIABLES:\ncruise_id (dimensionless)\nyear (dimensionless)\nprogram (dimensionless)\ncast (dimensionless)\nstation (dimensionless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndepth_w (Depth, meters)\nsample_id (dimensionless)\nmin_sample_depth (meters)\ndepth (Max Sample Depth, m)\nmonth_local (dimensionless)\nday_local (dimensionless)\ntime_local (dimensionless)\nd_n_flag (dimensionless)\ngear_type (dimensionless)\ngear_area_m2 (m^2)\ngear_mesh (mm)\nvol_filt (meters^3)\ncounter_id (dimensionless)\ncomments (dimensionless)\nperc_counted (0-100%)\nnodc_code (dimensionless)\nspecies (dimensionless)\nlife_stage (dimensionless)\nabund (individuals per meter^3)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_2453_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_2453/index.htmlTable https://www.bco-dmo.org/dataset/2453 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_2453.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_2453&showErrors=false&email= BCO-DMO bcodmo_dataset_2453
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_772445.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_772445 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_772445.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_772445/ public [Water temperature for Palau corals] - Water temperature records for Acropora hyacinthus coral colonies located in either patch or fore reefs of the Palau Archipeglo from November 2017 to January 2020 (Predicting the global location of heat tolerant corals: Palau patch reefs as a general model) Water temperature records for Acropora hyacinthus coral colonies located in either patch or fore reefs of the Palau Archipeglo from November 2017 to July 2018.\n\ncdm_data_type = Other\nVARIABLES:\nCollection_date_time (unitless)\ntime (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)\nTemperature (degrees Celsius)\nColony_tag (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nReef_number (unitless)\nReef_type (unitless)\nSpecies (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_772445_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_772445/index.htmlTable https://www.bco-dmo.org/dataset/772445 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_772445.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_772445&showErrors=false&email= BCO-DMO bcodmo_dataset_772445
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2986.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2986 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2986.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_2986/ public [whales ship-based sightings] - Marine mammal sightings and hours at sea during vessel-based habitat sampling cruises of Cape Cod Bay and adjacent waters from the R/V Shearwater NEC-MB2002-1, 2002 (NEC-CoopRes project) (Northeast Consortium: Cooperative Research) Marine mammal sightings and hours at sea during vessel-based habitat sampling cruises of Cape Cod Bay and adjacent waters from the R/V Shearwater NEC-MB2002-1, 2002 (Northeast Consortium Cooperative Research project).\n\ncdm_data_type = Other\nVARIABLES:\nregion\ncruiseid\nhrs_at_sea\nyear\nmonth_local\nday_local\nyrday_local (unitless)\nspecies\ncount\ncomments\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_2986/index.htmlTable https://www.bco-dmo.org/dataset/2986 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_2986.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_2986&showErrors=false&email= BCO-DMO bcodmo_dataset_2986
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_682074 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_682074.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_682074/ public [Zooplankton Densities] - Zooplankton densities collected from a seasonally hypoxic fjord on R/V Clifford A Barnes cruises from 2012-2013 (Pelagic Hypoxia project) (Consequences of hypoxia on food web linkages in a pelagic marine ecosystem) Zooplankton densities collected from a seasonally hypoxic fjord on R/V Clifford A Barnes cruises from 2012-2013 (Pelagic Hypoxia project)\n\ncdm_data_type = Other\nVARIABLES:\nstation (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nday_night (unitless)\nspecies (unitless)\ndate (unitless)\ntime_start (unitless)\nlife_history_stage (unitless)\nsample_code (unitless)\nmesh_size (microns)\ndepth_max (Depth, meters)\ndepth_min (Depth, meters)\nFWC_DS (unitless)\ndensity (count per meter cubed)\ntime (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_682074_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_682074/index.htmlTable https://www.bco-dmo.org/dataset/682074 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_682074.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_682074&showErrors=false&email= BCO-DMO bcodmo_dataset_682074
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_564755 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_564755.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_564755/ public [Zooplankton from hypoxic waters of Chesapeake Bay] - Concentration of zooplankton, in particular copepods, from hypoxic waters collected by R/V Hugh R. Sharp cruises (HRS100524JP, HRS100819JP, HRS100920JP, HRS110525JP, HRS110719JP, HRS110922JP) in the Chesapeake Bay from 2010-2011 (DeZoZoo project) (Hypoxia in Marine Ecosystems: Implications for Neritic Copepods) These data represent a merging of electronic data collected from the MOCNESS\nsensor systems and the count data from the samples collected with the net\ntows. Some nets were used for zooplankton samples, while others were collected\nspecifically to estimate bay anchovy concentrations. (See associated dataset:[\nhttps://www.bco-dmo.org/dataset/563428](\\\\http://www.bco-\ndmo.org/dataset/563428\\\\).) These are contained on different sheets, and the\ncount data was merged individually.\n\ncdm_data_type = Other\nVARIABLES:\ncruiseid (text)\ncruise_informal (text)\nyear (time)\nmonth_local (time)\ntow (text)\nday_local (time)\nnet (text)\ngear (text)\ntime_local (HH:MM)\nlatitude (degrees_north)\nlongitude (degrees_east)\nyrday_local (time)\nvol_filt (cubic meters)\ntemp (Temperature, degrees centrigrade)\nsal (PSU)\nO2_mg_L (milligrams per liter)\nfluor (milligrams per cubic meter)\nturbidity (NTU)\nPAR (Downwelling Photosynthetic Photon Radiance In Sea Water, microEinsteins per square meter per second)\nlat_end (Latitude, decimal degrees)\nlon_end (Longitude, decimal degrees)\n... (15 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_564755_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_564755/index.htmlTable https://www.bco-dmo.org/dataset/564755 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_564755.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_564755&showErrors=false&email= BCO-DMO bcodmo_dataset_564755

 
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