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BCO-DMO ERDDAP
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| griddap | Subset | tabledap | Make A Graph | wms | files | Accessible | Title | Summary | FGDC | ISO 19115 | Info | Background Info | RSS | Institution | Dataset ID | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_954470_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_954470_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_954470_v1/ | public | [Carribean sponges - bulk isotopes] - Bulk isotope data from sponges collected in Summerland Key in Florida between July 27 - August 19, 2021 (Collaborative Research: Investigations into microbially mediated ecological diversification in sponges) | Sponges represent one of the oldest extant animal phyla, and their associations with microbial symbionts have likely played a critical role in their success on oligotrophic coral reefs. For example, variation in the abundance, diversity, and community composition of microbiomes across host species may drive niche partitioning due to differential assimilation and recycling of nutrients across sponge species. Stable isotope analysis of bulk sponge tissue allowed us to test for evidence of partitioning of three major resource pools (dissolved organic matter: DOM, particulate organic matter: POM, and inorganic nutrients: NaHCO3 and NaNO3) among four emergent Caribbean sponge species. Results from bulk (holobiont tissue including both sponge and microbial cells) stable isotope analysis show niche partitioning, with strong interspecific variation in the relative exploitation of each resource pool. These results demonstrate that associations with microbial symbionts have facilitated niche partitioning by allowing host sponges to acquire and recycle diverse nutrient pools via unique mechanisms.\n\ncdm_data_type = Other\nVARIABLES:\nExperiment (unitless)\ntime_sample (Time, unitless)\nreplicate (unitless)\nspecies_abbreviation (unitless)\nSpecies_name (unitless)\nCollection_date (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nLinear_corr_d15N (permille (‰))\nwt_perc_N (percentag (%))\nAtm_perc_15N (percentag (%))\nLinear_corr_d13C (permille (‰))\nwt_perc_C (percentag (%))\nAtm_perc_13C (percentag (%))\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_954470_v1_fgdc.xml | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_954470_v1_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_954470_v1/index.htmlTable | https://osprey.bco-dmo.org/dataset/954470
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_954470_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_954470_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_954470_v1 | |||
| log in | [Fish Flight Initiation Distance Data] - Fish Flight Initiation Distance Data During the COVID 19 Lockdown from 2020-2021 (Galapagos diver disturbance project) (RAPID: Illuminating the effects of a COVID-19 elimination of diver disturbance on reef fish behavior, distribution and ecosystem functioning in the Galapagos Marine Reserve) | The effect of changing levels of scuba diver disturbance, from a low during the 2020 COVID 19 lockdown to normal levels a year later (2021) was measured to test the hypothesis that fish would be less wary when during the lockdown. The Flight Initiation Distance (FID) data, reported here in meters indicate how close a diver can approach an individual fish before it swims away (flees). 2,151 measurements of FID are reported here for a diverse array of reef fish and shark species at sites in the central Galapagos Islands. These data were collected by Dr.s Robert Lamb and Franz Smith in collaboration with PI Jon Witman.\n\ncdm_data_type = Other\nVARIABLES:\nObservation_ID (unitless)\nSite (unitless)\nDate (unitless)\nSpecies_Name (unitless)\nTotal_Body_Length (centimeters (cm))\nDistance_diver_was_from_start_point (meters (m))\nDistance_to_fish_at_start_of_flight (meters (m))\nFlight_Initiation_Distance (meters (m))\n | BCO-DMO | bcodmo_dataset_913602_v1 | ||||||||||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_954333_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_954333_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_954333_v1/ | public | [Isotopic niche space and microbiomes of Caribbean sponges] - Isotopic data from sponges collected in 2013 and 2014 from reefs in Honduras, Belize, Panama and the Florida Keys. (Collaborative Research: Investigations into microbially mediated ecological diversification in sponges) | Marine sponges host diverse communities of microbial symbionts that expand the metabolic capabilities of their host, but the abundance and structure of these communities is highly variable across sponge species. Specificity in these interactions may fuel host niche partitioning on crowded coral reefs by allowing individual sponge species to exploit unique sources of carbon and nitrogen, but this hypothesis is yet to be tested. Given the presence of high sponge biomass and the coexistence of diverse sponge species, the Caribbean Sea provides a unique system in which to investigate this hypothesis. To test for ecological divergence among sympatric Caribbean sponges and investigate whether these trends are mediated by microbial symbionts, we measured stable isotope (δ13C and δ15N) ratios and characterized the microbial community structure of sponge species at sites within four regions spanning a 1700 km latitudinal gradient. Samples were collected in 2013 and 2014 from reefs in Honduras, Belize, Panama, and the Florida Keys. There was a low (median of 8.2 %) overlap in the isotopic niches of sympatric species; in addition, host identity accounted for over 75% of the dissimilarity in both δ13C and δ15N values and microbiome community structure among individual samples within a site. There was also a strong phylogenetic signal in both δ15N values and microbial community diversity across host phylogeny, as well as a correlation between microbial community structure and variation in δ13C and δ15N values across samples. Together, this evidence supports a hypothesis of strong evolutionary selection for ecological divergence across sponge lineages and suggests that this divergence is at least partially mediated by associations with microbial symbionts.\n\ncdm_data_type = Other\nVARIABLES:\nSpecies_name (unitless)\nRegion_Country (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nMonth_and_year_of_collection (unitless)\nAve_depth_ft (feet)\nFreeman_Mean_Chla_Dry_wt (micrograms of chlorophyll a per gram of sponge tissue)\nHL_Chla (unitless)\nHMA_LMA (unitless)\n... (9 more variables)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_954333_v1_fgdc.xml | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_954333_v1_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_954333_v1/index.htmlTable | https://osprey.bco-dmo.org/dataset/954333
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_954333_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_954333_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_954333_v1 | |||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_788903.subset | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_788903 | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_788903/ | public | [Reef Fish Genetic Accessions 2019] - Reef Fish genetic accession numbers at NCBI Genbank (Origins of Hawaiian Reef Fishes) | Reef Fish genetic accession numbers at NCBI Genbank.\n\ncdm_data_type = Other\nVARIABLES:\nSpecies_Name (unitless)\nSequence_Description (unitless)\nCollection_Location (unitless)\nSequence_Analysis_Method (unitless)\nJournal_Publications (unitless)\nJournal_Publication_DOI (unitless)\nGenbank_Accession_Range (unitless)\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_788903/index.htmlTable | https://www.bco-dmo.org/dataset/788903
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_788903.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_788903&showErrors=false&email= | BCO-DMO | bcodmo_dataset_788903 | |||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_958181_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_958181_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_958181_v1/ | public | [Reef surveys before SCTLD (2018 and 2020)] - Benthic community data from surveys of reefs in southwestern Puerto Rico during 2018 and 2020 (RAPID: MICROBIOME AND POPULATION DYNAMICS IN SCLERACTINIAN CORAL TISSUE LOSS DISEASE INFECTED CORALS IN PUERTO RICO) | This data set consists of benthic community surveys from reefs in southwestern Puerto Rico. The surveys occurred during 2018 and 2020 at various shallow depths (3-, 4-, 10-, 15-meters) in the reefs Turrumote 2, Romero, Guilligan Is, Guanica Bay, Cayo Coral, and Punta Guanica. The methodology used in the field was the line transect method.\n\nTo understand the community changes caused by Stony Coral Tissue Loss Disease (SCTLD), a baseline is needed before the advent of the disease. These benthic coverage data composed of different coral species, algae, and other substrata will serve as the baseline information and were collected by Dr. Ernesto Weil of the Department of Marine Sciences, University of Puerto Rico at Mayaguez.\n\ncdm_data_type = Other\nVARIABLES:\nYear (unitless)\nDate (unitless)\nLocality (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nReef_Number (unitless)\nTransect (unitless)\ndepth (m)\nDepth_code (unitless)\nGroup (unitless)\nGenera (unitless)\nSpecies_code (unitless)\nSpecies_name (unitless)\nRaw_data (centimeters (cm))\nlinear_cover (centimeters (cm))\npercent_cover (percentage (%))\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_958181_v1_fgdc.xml | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_958181_v1_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_958181_v1/index.htmlTable | https://osprey.bco-dmo.org/dataset/958181
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_958181_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_958181_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_958181_v1 |