Accessing BCO-DMO data
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BCO-DMO ERDDAP
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| griddap | Subset | tabledap | Make A Graph | wms | files | Accessible | Title | Summary | FGDC | ISO 19115 | Info | Background Info | RSS | Institution | Dataset ID | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_934706_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_934706_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_934706_v1/ | public | [AE1913 Protein Spectral Counts] - Scaffold-derived metaproteomic exclusive and total spectral counts associated with proteins from samples taken during R/V Atlantic Explorer cruise AE1913 from the Sargasso Sea to Northeast US shelf waters in June of 2019 (Collaborative Research: Direct Characterization of Adaptive Nutrient Stress Responses in the Sargasso Sea using Protein Biomarkers and a Biogeochemical AUV) | These are the Scaffold-derived metaproteomic exclusive and total spectral counts associated with proteins. Samples were taken during R/V Atlantic Explorer cruise AE1913 in Subtropical North Atlantic, beginning at the Bermuda Atlantic Time-series Station (BATS) of the Sargasso Sea and ending in coastal Northeast US shelf waters in June of 2019.\n\ncdm_data_type = Other\nVARIABLES:\nrow_id (unitless)\nprotein_id (unitless)\nkegg_id (unitless)\nenzyme_comm_id (unitless)\nprotein_name (unitless)\npfams_id (unitless)\nsupergroup (unitless)\nclassification (unitless)\nsample_id (unitless)\nspectral_count (unitless)\ncruise_id (unitless)\nstation_id (unitless)\ndepth (Depth_m, m)\nminimum_filter_size_microns (microns (um))\nmaximum_filter_size_microns (microns (um))\ndate_y_m_d (unitless)\nlatitude (Latitude_dd, degrees_north)\nlongitude (Longitude_dd, degrees_east)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_934706_v1_fgdc.xml | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_934706_v1_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_934706_v1/index.htmlTable | https://www.bco-dmo.org/dataset/934706
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_934706_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_934706_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_934706_v1 | |||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_768237_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_768237_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_768237_v1/ | public | [Ross Sea metaproteome protein spectral counts] - Ross Sea metaproteome protein spectral counts searched against Phaeocystis strain transcriptome from net tows during RVIB Nathaniel B. Palmer cruise NBP0601 in December of 2015 (Controls of Ross Sea Algal Community Structure) | A net tow metaproteome of a Phaeocystis antarctica bloom in the Ross Sea, mapped here to Phaeocystis metatranscriptomes analyzed by 2D LCMS, in units of protein spectral counts.\n\ncdm_data_type = Other\nVARIABLES:\nsample_id (unitless)\ncruise_id (unitless)\nstation_id (unitless)\nlatitude_dd (degrees_north)\nlongitude (Longitude_dd, degrees_east)\ndepth (Depth_m, m)\ndate_local (unitless)\ntime_local (unitless)\nminimum_filter_size_microns (microns (um))\nmaximum_filter_size_microns (microns (um))\nprotein_id (unitless)\nprotein_name (unitless)\nspectral_count (count)\nmolecular_weight_kDa (kilo-Daltons (kDa))\nncbi_id (unitless)\nncbi_name (unitless)\nkegg_id (unitless)\nkegg_description (unitless)\nkegg_pathway (unitless)\npfams_id (unitless)\npfams_name (unitless)\nuniprot_id (unitless)\nenzyme_comm_id (unitless)\nother_identified_proteins (unitless)\ntime (Iso_datetime_utc, seconds since 1970-01-01T00:00:00Z)\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_768237_v1/index.htmlTable | https://www.bco-dmo.org/dataset/768237
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_768237_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_768237_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_768237_v1 |