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| griddap | Subset | tabledap | Make A Graph | wms | files | Accessible | Title | Summary | FGDC | ISO 19115 | Info | Background Info | RSS | Institution | Dataset ID | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_911212_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_911212_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_911212_v1/ | public | [Epiphytic bacteria methane production data] - MPn-derived methane production by epiphytic bacteria on pelagic Sargassum seaweed from 2017-2019 (Cyanobacteria Hydrocarbons project) (Collaborative Research: Do Cyanobacteria Drive Marine Hydrocarbon Biogeochemistry?) | The essential nutrient phosphorus is biologically scarce in the Sargasso Sea, yet the pelagic macroalgae Sargassum, for which this area of the North Atlantic Ocean is named, thrives. We tested the hypothesis that Sargassum holobionts utilize methylphosphonate (MPn) as an alternative source of phosphorus, finding lysis liberated phosphonate-derived methane. The observed activity occurred at concentrations as low as 35 nM MPn and was inhibited by antibiotics, implicating microbial members of the holobiont capable of MPn lysis at realistic environmental concentrations. A survey of macroalgal species inhabiting the Sargasso Sea found a ubiquitous capacity for MPn lysis; such capacity was absent in species inhabiting phosphorus-replete waters of the California Current, pointing to phosphorous limitation as a selective pressure. These results suggest algal holobionts may conditionally acquire phosphorus from phosphonates while simultaneously serving as a source of atmospheric methane.\n\ncdm_data_type = Other\nVARIABLES:\nOrder (unitless)\nDate (unitless)\nTrial (unitless)\nCondition (unitless)\nNumber_of_Replicates (count)\nInitial_MPn (nM)\nAdditional_Amendments (unitless)\nBottle (unitless)\nT1_Timepoint (days)\nT1_Timepoint_mean_CH4_production (nmol g^-1)\nT1_Timepoint_CH4_no_sig_fig_rounding (nmol g^-1)\nT2_Timepoint (days)\nT2_Timepoint_mean_CH4_production (nmol g^-1)\nT2_Timepoint_CH4_no_sig_fig_rounding (nmol g^-1)\nT3_Timepoint (days)\nT3_Timepoint_CH4_production (nmol g^-1)\nT3_Timepoint_CH4_no_sig_fig_rounding (nmol g^-1)\n... (40 more variables)\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_911212_v1/index.htmlTable | https://www.bco-dmo.org/dataset/911212
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_911212_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_911212_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_911212_v1 | |||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_709440 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_709440.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_709440/ | public | [Fe(II) oxygen concentrations over time] - Fe(II) concentrations over time in iron oxidizing bacteria cultures. (Collaborative Research: The Role of Iron-oxidizing Bacteria in the Sedimentary Iron Cycle: Ecological, Physiological and Biogeochemical Implications) | Fe(II) concentrations over time in iron oxidizing bacteria cultures.\n\ncdm_data_type = Other\nVARIABLES:\nvial (unitless)\ndate (unitless)\ntime2 (Time, hours)\nFe_II_concentration (mM)\nstandard_deviation (mM)\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_709440/index.htmlTable | https://www.bco-dmo.org/dataset/709440
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_709440.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_709440&showErrors=false&email= | BCO-DMO | bcodmo_dataset_709440 | |||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_709543 | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_709543/ | public | [Ferrozine assay data] - Oxygen consumption rates/zero valen iron dissolution of FeOB (Ferrozine assay) with Kanamycin addition (Collaborative Research: The Role of Iron-oxidizing Bacteria in the Sedimentary Iron Cycle: Ecological, Physiological and Biogeochemical Implications) | Oxygen consumption rates/zero valen iron dissolution of FeOB (Ferrozine assay) with Kanamycin addition\n\ncdm_data_type = Other\nVARIABLES:\nvial (unitless)\ndate (unitless)\ntreatment (unitless)\ntime_elapsed (hours)\nFe_II_concentration (mM)\nstandard_deviation (mM)\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_709543/index.htmlTable | https://www.bco-dmo.org/dataset/709543
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_709543.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_709543&showErrors=false&email= | BCO-DMO | bcodmo_dataset_709543 | ||||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_811483.subset | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_811483 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_811483.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_811483/ | public | [IODP360 - Replicate Cell Counts] - Supplementary Table 3B: Replicate cell counts for the 11 samples and alkaline phosphatase activity measurements available for any of the 11 samples (Collaborative Research: Delineating The Microbial Diversity and Cross-domain Interactions in The Uncharted Subseafloor Lower Crust Using Meta-omics and Culturing Approaches) | Supplementary Table 3B: Overview of archaeal and bacterial lipid biomarkers and cell counts. Replicate cell counts for the 11 samples and alkaline phosphatase activity measurements available for any of the 11 samples. Samples were taken on board of the JOIDES Resolution between November 30, 2015 and January 30, 2016 in the SW Indian Ridge.\n\ncdm_data_type = Other\nVARIABLES:\nSample (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndepth (m)\nReplicate_1 (cells per cubic centimeter (cells/cm3))\nReplicate_2 (cells per cubic centimeter (cells/cm3))\nAverage (cells per cubic centimeter (cells/cm3))\nStandard_Deviation (cells per cubic centimeter (cells/cm3))\nAP_activity (picomole per gram per hour (pmol g-1 h-1))\nTime_of_AP_measurment (hours (Hr))\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_811483_fgdc.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_811483/index.htmlTable | https://www.bco-dmo.org/dataset/811483
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_811483.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_811483&showErrors=false&email= | BCO-DMO | bcodmo_dataset_811483 | |||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_641495 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_641495.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_641495/ | public | [Prochlorococcus_narB] - The abundance of Prochlorococcus cells containing the nitrate reductase gene (narB) at the HOT and BATS sites in the Pacific and Atlantic Oceans between October 2005 and January 2008 (Nitrate Assimilation and the Ecology of Prochlorococcus: Features and Implications of Intraspecific Diversity in a Model Marine Phototroph) | Two year time series of the abundance of Prochlorococcus cells containing the\nnitrate reductase gene (narB) at the HOT and BATS sites in the Pacific and\nAtlantic Oceans. The goal was to collect long-term, high-resolution data on\nthe temporal and spatial variability of Prochlorococcus narB genotypes\nbelonging to the HLII and LLI clades. The abundance of Prochlorococcus cells\ncontaining narB for each of these clades was determined by quantitative PCR at\n12 depths every month from October 2005 to December 2007 at two locations:\nBATS location (5 nautical mile radius around 31 40'N, 64 10'W) and HOT Station\nALOHA (5 nautical mile radius around 22 45'N, 158 00' W). These field samples\nare a subset of those utilized in the \\Prochlorococcus HOT/BATS\\ dataset\n([https://www.bco-dmo.org/dataset/3381](\\\\http://www.bco-\ndmo.org/dataset/3381\\\\)).\n \nThese data are reported and described in:\n \nBerube, P. M., Coe, A., Roggensack, S. E., & Chisholm, S. W. (2015). Temporal\ndynamics of Prochlorococcuscells with the potential for nitrate assimilation\nin the subtropical Atlantic and Pacific oceans. Limnology and Oceanography,\n61(2), 482\\u2013495. doi:10.1002/lno.10226\n\ncdm_data_type = Other\nVARIABLES:\ngene (text)\nsite (text)\nlatitude (degrees_north)\nlongitude (degrees_east)\ncruiseid (numeric)\nyear (unitless)\nmonth (mm)\nday (dd)\ndate (mm/dd/yy)\n... (7 more variables)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_641495_fgdc.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_641495/index.htmlTable | https://www.bco-dmo.org/dataset/641495
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_641495.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_641495&showErrors=false&email= | BCO-DMO | bcodmo_dataset_641495 |