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https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_765477 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_765477.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_765477/ public [Attributes of communities-at-sea] - Attributes of communities-at-sea, including the size of servicesheds and climate change risk exposure scores, determined from Vessel Trip Report (VTR) data for commercial fishing trips from 1996 to 2014 (Adaptations of fish and fishing communities to rapid climate change) Communities-at-sea are peer-groups of vessels which share a gear type and are associated with a particular port (e.g., vessels from New Bedford, MA that use gillnets). For vessels using trawl gear, small and large trawlers are considered separate communities according to vessel length (<> 65 feet). We used Vessel Trip Report (VTR) data for commercial fishing trips from 1996 to 2014, as reported by vessel captains, to determine the at-sea \\servicesheds\\ or customary fishing grounds of communities.\n\ncdm_data_type = Other\nVARIABLES:\nCommunity (unitless)\nPort (unitless)\nState (unitless)\nGear (unitless)\nlongitude (Port Lon, degrees_east)\nlatitude (degrees_north)\nFleetsize (number of vessels)\nTrips (number of trips)\nYears (number of years)\nShedArea (Shed Area, square kilometers (sq km))\nRiskExposure (Risk Exposure, unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_765477_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_765477/index.htmlTable https://www.bco-dmo.org/dataset/765477 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_765477.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_765477&showErrors=false&email= BCO-DMO bcodmo_dataset_765477
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_907321_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_907321_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_907321_v1/ public [Ecological monitoring Natividad 2006-2021: Algae] - Ecological monitoring of algae on Isla Natividad from 2006 to 2021 (Collaborative Research: Evaluating how abalone populations in the California Current are structured by the interplay of large-scale oceanographic forcing and nearshore variability) This dataset encompasses information about algae transects between 2006 to 2021 in Isla Natividad, Baja California Sur, Mexico. Abundances of algae and the number of stipes of each individual algae can be found in the data set. Also, the dates when the transects were done, the site, the name of the diver, the depth the transect was laid, if the site was a marine reserve or not, if the site is inside a marine protected area or not, the latitude and longitude of the sites, the temperature of the water, the number of transect from where the information was counted, and the species name of algae counted.\n\nEcological monitoring is important to collect data of species that inhabit an specific ecosystem. For this data set, we present all the data form 2006 to 2021 on algae, marine invertebrates, fish and uniform point contact at six different sites in Isla Natividad off the coast of Baja California Sur, Mexico. Data was collected once a year by trained divers as a collaborative effort from Stanford University, non-governmental organizations, and fishing cooperative federations. These data provides the abundaces of algae, invertebrates, fish and substrate  of Isla Natividad over the spam of 15 years and may be use to assess changes in the ecosystems after shocks such as hypoxic events or marine heatwaves.\n\ncdm_data_type = Other\nVARIABLES:\nID (unitless)\nDAY (unitless)\nMONTH (unitless)\nYEAR (unitless)\nSTATE (unitless)\nCOMMUNITY (unitless)\nSITE (unitless)\nLAT (degrees_north)\nlongitude (Long, degrees_east)\nHABITAT (unitless)\nZONE (unitless)\nPROTECTION (unitless)\n... (18 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_907321_v1/index.htmlTable https://www.bco-dmo.org/dataset/907321 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_907321_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_907321_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_907321_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_907363_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_907363_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_907363_v1/ public [Ecological monitoring Natividad 2006-2021: Fish] - Ecological monitoring of fish on Isla Natividad from 2006 to 2021 (Collaborative Research: Evaluating how abalone populations in the California Current are structured by the interplay of large-scale oceanographic forcing and nearshore variability) This dataset encompasses information about fish transects between 2006 to 2021 in Isla Natividad. Abundances, sex and size of fish can be found in the data set. Also, the dates when the transects were done, the site, the name of the diver, the depth the transect was laid, if the site was a marine reserve or not, if the site is inside a marine protected area or not, the latitude and longitude of the sites, the temperature of the water, the number of transect from where the information was counted, and the species name of the fish counted.\n\nEcological monitoring is important to collect data of species that inhabit an specific ecosystem. For this data set, we present all the data form 2006 to 2021 on algae, marine invertebrates, fish and uniform point contact at six different sites in Isla Natividad off the coast of Baja California Sur, Mexico. Data was collected once a year by trained divers as a collaborative effort from Stanford University, non-governmental organizations, and fishing cooperative federations. These data provides the abundaces of algae, invertebrates, fish and substrate  of Isla Natividad over the spam of 15 years and may be use to assess changes in the ecosystems after shocks such as hypoxic events or marine heatwaves.\n\ncdm_data_type = Other\nVARIABLES:\nID (unitless)\nDAY (unitless)\nMONTH (unitless)\nYEAR (unitless)\nSTATE (unitless)\nCOMMUNITY (unitless)\nSITE (unitless)\nLAT (degrees_north)\nlongitude (Long, degrees_east)\nHABITAT (unitless)\nZONE (unitless)\nPROTECTION (unitless)\nMPA (unitless)\n... (15 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_907363_v1/index.htmlTable https://www.bco-dmo.org/dataset/907363 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_907363_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_907363_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_907363_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_907353_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_907353_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_907353_v1/ public [Ecological monitoring Natividad 2006-2021: Invertebrates] - Ecological monitoring of marine invertebrates on Isla Natividad from 2006 to 2021 (Collaborative Research: Evaluating how abalone populations in the California Current are structured by the interplay of large-scale oceanographic forcing and nearshore variability) This dataset encompasses information about marine invertebrates transects between 2006 to 2021 in Isla Natividad. Abundances of invertebrates can be found in the data set. Also, the dates when the transects were done, the site, the name of the diver, the depth the transect was laid, if the site was a marine reserve or not, if the site is inside a marine protected area or not, the latitude and longitude of the sites, the temperature of the water, the number of transect from where the information was counted, and the species name of each invertebrate counted.\n\nEcological monitoring is important to collect data of species that inhabit an specific ecosystem. For this data set, we present all the data form 2006 to 2021 on algae, marine invertebrates, fish and uniform point contact at six different sites in Isla Natividad off the coast of Baja California Sur, Mexico. Data was collected once a year by trained divers as a collaborative effort from Stanford University, non-governmental organizations, and fishing cooperative federations. These data provides the abundaces of algae, invertebrates, fish and substrate  of Isla Natividad over the spam of 15 years and may be use to assess changes in the ecosystems after shocks such as hypoxic events or marine heatwaves.\n\ncdm_data_type = Other\nVARIABLES:\nID (unitless)\nDAY (unitless)\nMONTH (unitless)\nYEAR (unitless)\nSTATE (unitless)\nCOMMUNITY (unitless)\nSITE (unitless)\nLAT (degrees_north)\nlongitude (Long, degrees_east)\nHABITAT (unitless)\nZONE (unitless)\nPROTECTION (unitless)\nMPA (unitless)\n... (13 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_907353_v1/index.htmlTable https://www.bco-dmo.org/dataset/907353 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_907353_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_907353_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_907353_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_907373_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_907373_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_907373_v1/ public [Ecological monitoring Natividad 2006-2021: UPC] - Uniform point contact (UPC) transect data from Isla Natividad from 2006 to 2021 (Collaborative Research: Evaluating how abalone populations in the California Current are structured by the interplay of large-scale oceanographic forcing and nearshore variability) This dataset encompasses information about Uniform point contact (UPC) transects between 2006 to 2021 in Isla Natividad. UPC refers to the information about the substrate where the transect is laid. Every meter (along the 30m transect) you identify what type of substrate there is (e.g., sand, cobble, boulder, reef, other such as anthropogenic), what type of cover there is (e.g., none, brown algae, green algae, red algae, crustose coralline algae, mobile invertebrates, sessile invertebrates or seagrass) and the height of the relief (e.g., less than 10cm, between 10cm and 1m, between 1m and 2m or more than 2m). With this information you can assess the kelp forest ecosystem. This dataset also has information about the dates when the transects were done, site, the name of the diver, the depth the transect was laid, if the site was a marine reserve or not, if the site is inside a marine protected area or not, the latitude and longitude of the sites, the temperature of the water, the number of transect from where the information was counted and the total of substrate, cover and relief points.\n\nEcological monitoring is important to collect data of species that inhabit an specific ecosystem. For this data set, we present all the data form 2006 to 2021 on algae, marine invertebrates, fish and uniform point contact at six different sites in Isla Natividad off the coast of Baja California Sur, Mexico. Data was collected once a year by trained divers as a collaborative effort from Stanford University, non-governmental organizations, and fishing cooperative federations. These data provides the abundaces of algae, invertebrates, fish and substrate  of Isla Natividad over the spam of 15 years and may be use to assess changes in the ecosystems after shocks such as hypoxic events or marine heatwaves.\n\ncdm_data_type = Other\nVARIABLES:\nID (unitless)\nDAY (unitless)\nMONTH (unitless)\nYEAR (unitless)\nSTATE (unitless)\nCOMMUNITY (unitless)\nSITE (unitless)\n... (40 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_907373_v1/index.htmlTable https://www.bco-dmo.org/dataset/907373 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_907373_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_907373_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_907373_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_949666_v1 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_949666_v1/ public [Metadata for longread sequencing of Carcinus maenas] - Metadata for longread sequencing of Carcinus maenas collected from Buzzard's Bay, Massachusetts from May 2022 to Aug 2022 (Collaborative Research: Tracking fine-scale selection to temperature at the invasion front of a highly dispersive marine predator) This project explores genomic changes in the invasive European green crab (Carcinus maenas), including at a putative inversion polymorphism. To begin to explore structural variation without a reference genome, we conducted semi-targeted longread sequencing of the C. maenas genome using MinION sequencing. This dataset includes individual metadata for 6 raw MinION reads, archived at GenBank's SRA under BioProject PRJNA1171011. This sequencing was conducted using crabs from Massachusetts waters.\n\ncdm_data_type = Other\nVARIABLES:\nsample_name (unitless)\nCollection_date (unitless)\nSRA_accession (unitless)\nbiosample_accession (unitless)\nembayment (unitless)\nstate (unitless)\nsex (unitless)\nlife_stage (unitless)\nrun_ID (unitless)\nsequencing_date (unitless)\nrun_day (days)\nprobe_set (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_949666_v1/index.htmlTable https://www.bco-dmo.org/dataset/949666 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_949666_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_949666_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_949666_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_949682_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_949682_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_949682_v1/ public [Metadata for RNASeq of green crabs in the northeast Pacific] - Metadata for RNASeq of green crabs collected in the northeast Pacific from Apr 2017 to Aug 2021 (Collaborative Research: Tracking fine-scale selection to temperature at the invasion front of a highly dispersive marine predator) This project explores genomic changes in the invasive European green crab (Carcinus maenas) in the northeast Pacific. It tracks the earliest stages of green crab invasion into a new environment where the species is predicted to have substantial ecological and economic impacts. Samples span time and space across the species range in the northeast Pacific, with a focus on areas where the species is currently expanding. This dataset includes individual metadata for 127 raw RNA-Seq reads, archived at GenBank's SRA under BioProject PRJNA1170986.\n\ncdm_data_type = Other\nVARIABLES:\nsample_name (unitless)\nSRA_accession (unitless)\nbiosample_accession (unitless)\nembayment (unitless)\nsite (unitless)\nstate (unitless)\nsex (unitless)\nsize_CW (Millimeters (mm))\ncolor (unitless)\ncollection_date (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ncollector (unitless)\ncollector_affiliation (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_949682_v1_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_949682_v1_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_949682_v1/index.htmlTable https://www.bco-dmo.org/dataset/949682 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_949682_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_949682_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_949682_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_949610_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_949610_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_949610_v1/ public [Metadata for targeted genotyping of green crabs in the northeast Pacific] - Metadata for targeted genotyping of green crabs collected in the northeast Pacific from Aug 2016 to Oct 2022 (Collaborative Research: Tracking fine-scale selection to temperature at the invasion front of a highly dispersive marine predator) This project explores genetic changes in the invasive European green crab (Carcinus maenas) in the northeast Pacific, using targeted genotyping of SNPs identified in prior high-resolution population genomics in the region. It tracks the early stages of green crab invasion into a new environment, particularly through repeated sampling of multiple size-classes of crabs from the same sites over multiple years. Samples span time and space across the species range in the northeast Pacific, with a focus on the coast of Washington and Oregon. This dataset includes individual collection and accession metadata for 1,662 crabs, for which raw demultiplexed reads are archived at GenBank's SRA under BioProject PRJNA1177418.\n\ncdm_data_type = Other\nVARIABLES:\nsample_name (unitless)\nSRA_accession (unitless)\nbiosample_accession (unitless)\nembayment (unitless)\nsite (unitless)\nstate (unitless)\nsex (unitless)\nsize_CW (Millimeters (mm))\ncolor (unitless)\ncollection_date (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ncollector (unitless)\ncollector_affiliation (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_949610_v1_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_949610_v1_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_949610_v1/index.htmlTable https://www.bco-dmo.org/dataset/949610 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_949610_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_949610_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_949610_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_908647_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_908647_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_908647_v1/ public [Temporal Comparison of Mussel (Mytilus californianus) Shell Thickness] - Temporal comparison of mussel (Mytilus californianus) shell thickness determined from shells collected from six study sites along the west coast of North America from 2000 to 2019 (Coastal mosaics of local adaptation and the eco-evolutionary dynamics of a marine predator-prey interaction) Climate change, specifically ocean acidification, is impacting calcification of marine organisms. A reduction in pH has been shown to affect mussel growth and shell thickness along the Pacific coast of North America. Mussels, Mytilus californianus, are a foundation species in rocky shore ecosystems and are prey for a number of taxa, including the Channeled Dogwhelk, Nucella canaliculata, which feeds by drilling a hole through the shell of their prey. Previous research has documented geographic variation in N. canaliculata predator drilling phenotype on Mytilus californianus. However, few studies have assessed how variation in mussel shell traits shape the evolution of this co-evolving predator. Thus, we analyzed M. californianus shell thickness over two decades (2000-2001, 2008-2009, and 2019) and across ~1,000 kilometers of coastline to quantify the prey-driven selection landscape. We analyzed mussel shell thickness at 1/3 the length of the mussel shell as this is the most commonly drilled region. Mussel shells from the central Oregon coast were thicker than those from California. This pattern is associated with geographic variation in predator drilling phenotypes. However, the selective landscape appears to be changing, with recent mussel shells being thinner than a decade prior, particularly on the central Oregon coast. This research highlights the importance of studying species interactions across broad spatial and temporal scales.\n\ncdm_data_type = Other\nVARIABLES:\nSite (unitless)\nSite_Code (unitless)\nState (unitless)\nLatitude (degrees_north)\nlongitude (degrees_east)\nDate_Collected (unitless)\nYear_Collected (unitless)\nTime_Period (unitless)\nQuadrat_num (unitless)\nMussel_num (unitless)\nShell_Length (millimeters (mm))\nHeight (millimeters (mm))\n... (11 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_908647_v1/index.htmlTable https://www.bco-dmo.org/dataset/908647 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_908647_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_908647_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_908647_v1

 
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