BCO-DMO ERDDAP
Accessing BCO-DMO data |
log in
Brought to you by BCO-DMO |
griddap | Subset | tabledap | Make A Graph | wms | files | Accessible | Title | Summary | ISO 19115 | Info | Background Info | RSS | Institution | Dataset ID | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_665454 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_665454.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_665454/ | public | BLASTp homology data from genes obtained in samples collected on the Gould (LMG1411) cruise in the Western Antarctica Peninsula during 2014 (Polar Transcriptomes project). | BLASTp homology data from genes obtained in samples collected on the Gould (LMG1411) cruise in the Western Antarctica Peninsula during 2014 (Polar Transcriptomes project).\n\ncdm_data_type = Other\nVARIABLES:\ngene (unitless)\ngenus (unitless)\nspecies (unitless)\nstrain (unitless)\nMMETSP_ID (unitless)\nsubject_ID (unitless)\ne_value (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nclade (unitless)\n | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_665454_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_665454/index.htmlTable | https://www.bco-dmo.org/dataset/665454 | https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_665454.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_665454&showErrors=false&email= | BCO-DMO | bcodmo_dataset_665454 | |||
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_750823 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_750823.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_750823/ | public | Data from an experiment that measured the occurrence of feeding among 8 Prorocentrum minimum strains on fluorescently labeled bacteria or the cryptophyte Teleaulax amphioxeia | This dataset contains data from an experiment that measured the occurrence of feeding among 8 Prorocentrum minimum strains on fluorescently labeled bacteria or the cryptophyte Teleaulax amphioxeia.\n\ncdm_data_type = Other\nVARIABLES:\nPrey (unitless)\nStrain (unitless)\ntreatment (unitless)\nrep (unitless)\ncells (unitless)\ncells_feeding (unitless)\npcnt_cells_feeding (unitless)\nGFI (unitless)\nGFI_per_cell (unitless)\nOFI (unitless)\nOFI_per_cell (unitless)\n | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_750823_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_750823/index.htmlTable | https://www.bco-dmo.org/dataset/750823 | https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_750823.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_750823&showErrors=false&email= | BCO-DMO | bcodmo_dataset_750823 | |||
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_780386 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_780386.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_780386/ | public | Elemental carbon and nitrogen data for Skeletonema species as analyzed in Anderson and Rynearson, 2020 | Elemental concentrations for Skeletonema species (n=2), as analyzed in Anderson and Rynearson, 2020. This dataset includes carbon, nitrogen, and volume measurements for S. marinoi (n=3) and S. pseudocostatum (n=4) evaluated at the thermal minimum, maximum, and optimum for each strain. Strains were isolated from Narragansett Bay, Rhode Island.\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\nStrain (unitless)\nGenBank (Gen Bank, unitless)\nCollection_date (unitless)\nlatitude (Isolation Lat, degrees_north)\nlongitude (Isolation Lon, degrees_east)\nIsolation_Temperature (degrees C)\nTemperature (degrees C)\nmeanC (Mean C, picomol carbon per cell)\nseC (Se C, picomol carbon per cell)\nmeanN (Mean N, picomol nitrogen per cell)\nseN (Se N, picomol nitrogen per cell)\nmeanCN (Mean CN, unitless)\nseCN (Se CN, unitless)\nmeanV (Mean V, cubic micrometers (um3))\nseV (Se V, cubic micrometers (um3))\nmean_cd (femtomol/cubic micrometers (fmol um-3))\nse_cd (femtomol/cubic micrometers (fmol um-3))\nmean_nd (femtomol/cubic micrometers (fmol um-3))\nse_nd (femtomol/cubic micrometers (fmol um-3))\n | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_780386_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_780386/index.htmlTable | https://www.bco-dmo.org/dataset/780386 | https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_780386.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_780386&showErrors=false&email= | BCO-DMO | bcodmo_dataset_780386 | |||
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_732890 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_732890.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_732890/ | public | Fv/Fm for cultured Clade A & B Symbiodinium with 2 treatments measured over a range of temperatures | Coral photosynthetic endosymbionts (Symbiodinium) are phylogenetically very diverse, yet the extent of inter- and intraspecific functional variation within clades remains largely underexplored. Understanding this variability will be critical for future research on climate change mediated responses. A properly functioning thylakoid membrane is essential for optimal photosynthetic performance both in free-living and in hospite conditions. Here we analyze the thylakoid membrane melting points of 13 Symbiodinium strains from species in Clades B and A, grown at both control (26 \\u00b0C) and high temperature (31 \\u00b0C). We observed a broad range of responses to thermal stress regardless of taxonomic rank. Our results support and augment a growing body of literature demonstrating that functional differences among Symbiodinium spp. are as distinct at lower taxonomic levels (i.e. interspecific) as they are among major clades. These findings highlight the importance of assessing the variability of plastid traits across the Symbiodinium tree.\n\ncdm_data_type = Other\nVARIABLES:\nStrain (unitless)\nSpecies (unitless)\nTreatment (unitless)\nReplicate (unitless)\nTemperature (degrees Celsius)\nFv_Fm (dimensionless)\n | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_732890_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_732890/index.htmlTable | https://www.bco-dmo.org/dataset/732890 | https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_732890.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_732890&showErrors=false&email= | BCO-DMO | bcodmo_dataset_732890 | |||
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_782814 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_782814.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_782814/ | public | Growth rates across multiple temperatures and light intensities for seven strains of a marine Chaetoceros sp. isolated from Narragansett Bay March 2018. Growth was measured across six to seven temperatures and three light intensities for each strain | Growth rates for seven strains of a marine Chaetoceros sp. isolated from Narragansett Bay March 2018. Growth was measured across six to seven temperatures and three light intensities for each strain\n\ncdm_data_type = Other\nVARIABLES:\nStrain (unitless)\nTemperature (degrees Celsius)\nLight (umol Photons per m2 per second)\ngrowth_rate_mean (cells/day)\ngrowth_rate_StDev (Growth Rate St Dev, cells/day)\n | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_782814_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_782814/index.htmlTable | https://www.bco-dmo.org/dataset/782814 | https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_782814.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_782814&showErrors=false&email= | BCO-DMO | bcodmo_dataset_782814 | |||
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_712803 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_712803.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_712803/ | public | Halomethane concentrations in cell culture | Halomethane concentrations in cell culture\n\ncdm_data_type = Other\nVARIABLES:\nStrain (unitless)\nSpecies (unitless)\nClade (unitless)\nTime_elapsed_hours (hours)\ncells_per_ml (cells per milliliter)\nCH3Br (CH3 BR, picomoles per liter)\nCH3I (CH3 I, picomoles per liter)\nCH3Cl (CH3 CL, picomoles per liter)\nCHBr3 (picomoles per liter)\n | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_712803_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_712803/index.htmlTable | https://www.bco-dmo.org/dataset/712803 | https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_712803.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_712803&showErrors=false&email= | BCO-DMO | bcodmo_dataset_712803 | |||
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_658497.subset | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_658497 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_658497.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_658497/ | public | Isolation, culturing, and sequencing of bacteria and viruses collected in Canoe Cove, Nahant, MA during 2010 (Marine Bacterial Viruses project) | Isolation, culturing, and sequencing of bacteria and viruses collected in Canoe Cove, Nahant, MA during 2010 (Marine Bacterial Viruses project)\n\ncdm_data_type = Other\nVARIABLES:\nbioproject_accession (unitless)\nenv_biome (unitless)\ngeo_loc_name (unitless)\norganism_type (unitless)\ncollection_date (unitless)\nisolation_source (unitless)\nsample_name (unitless)\norganism (unitless)\nstrain (unitless)\nisolate (unitless)\nhost (unitless)\nlab_host (unitless)\nsample_type (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ntemp (Temperature, degrees celsius)\nordinal_day_of_isolation (unitless)\ndescription (unitless)\n | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_658497_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_658497/index.htmlTable | https://www.bco-dmo.org/dataset/658497 | https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_658497.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_658497&showErrors=false&email= | BCO-DMO | bcodmo_dataset_658497 | ||
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_747872.subset | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_747872 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_747872.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_747872/ | public | NCBI accessions of the harmful alga Heterosigma akashiwo (CCMP2393) grown under a range of CO2 concentrations from 200-1000 ppm | This dataset includes metadata associated with NCBI BioProject PRJNA377729 \\Impacts of Evolution on the Response of Phytoplankton Populations to Rising CO2\\ PRJNA377729: https://www.ncbi.nlm.nih.gov/bioproject/PRJNA377729. The alga Heterosigma akashiwo was grown at CO2 levels from about 200 to 1000 ppm and then the DNA and RNA were sequenced.\n\ncdm_data_type = Other\nVARIABLES:\nsample_name (unitless)\nsample_title (unitless)\nbioproject_accession (unitless)\norganism (unitless)\nstrain (unitless)\nisolate (unitless)\nhost (unitless)\nisolation_source (unitless)\ntime (Collection Date, seconds since 1970-01-01T00:00:00Z)\ngeo_loc_name (unitless)\nsample_type (unitless)\nbiomaterial_provider (unitless)\ncollected_by (unitless)\ndepth (m)\nenv_biome (unitless)\ngenotype (unitless)\nlat_lon (Latitude, decimal degrees)\npassage_history (unitless)\nsamp_size (unitless)\ntemp_C (degrees Celsius)\nlight_level_umol_m2_s (micromol photons m-2 s-1)\nlight_dark_hr (hours)\nMedia (unitless)\nCO2_ppm (parts per million)\nAlkalinity (micromol per kilogram (umol/kg))\npH (Sea Water Ph Reported On Total Scale, unitless; pH scale)\n | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_747872_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_747872/index.htmlTable | https://www.bco-dmo.org/dataset/747872 | https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_747872.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_747872&showErrors=false&email= | BCO-DMO | bcodmo_dataset_747872 | ||
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_739636.subset | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_739636 | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_739636/ | public | Nitrosopelagicus brevis CN25 and U25 grown in nitrogen replete and deplete conditions, with subsequent transcriptome sequencing and identification. | Nitrosopelagicus brevis CN25 and U25 were grown in nitrogen replete and deplete conditions, with subsequent transcriptome sequencing.\n\ncdm_data_type = Other\nVARIABLES:\nAccession (unitless)\nSample_Name (unitless)\nOrganism (unitless)\nTax_ID (unitless)\nStrain (unitless)\n | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_739636_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_739636/index.htmlTable | https://www.bco-dmo.org/dataset/739636 | https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_739636.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_739636&showErrors=false&email= | BCO-DMO | bcodmo_dataset_739636 | |||
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774996 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774996.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_774996/ | public | Thermal growth for Skeletonema species as analyzed in Anderson and Rynearson, 2020 | Thermal growth rates for 24 strains representing 5 species from the diatom genus Skeletonema, as analyzed in Anderson and Rynearson, 2020. Strains were grown at temperatures ranging from -2 to 36C to assess how inter- and intraspecific thermal trait variability could explain diatom community dynamics.\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\nStrain (unitless)\nTemperature (degrees C)\nIsolation_Temperature (degrees C)\nGrowth (per day)\nGenBank (Gen Bank, unitless)\nCollection_date (unitless)\nlatitude (Isolation Lat, degrees_north)\nlongitude (Isolation Lon, degrees_east)\n | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_774996_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_774996/index.htmlTable | https://www.bco-dmo.org/dataset/774996 | https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_774996.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_774996&showErrors=false&email= | BCO-DMO | bcodmo_dataset_774996 | |||
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_782839 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_782839.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_782839/ | public | Thermal niche across three light levels for seven strains of a marine diatom Chaetoceros sp. isolated from Narragansett Bay March 2018 | Thermal niche, as calculated from the Thermal Performance Curve (TPC), across three light levels for seven strains of a marine diatom Chaetoceros sp. isolated from Narragansett Bay March 2018.\n\ncdm_data_type = Other\nVARIABLES:\nStrain (unitless)\nLight (umol Photons per m2 per second)\ntopt (degrees Celsius)\ntmin (Minimum Temperature, degrees Celsius)\ntmax (Maximum Temperature, degrees Celsius)\nrsqr (unitless)\nwidth (degrees Celsius)\n | https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_782839_iso19115.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_782839/index.htmlTable | https://www.bco-dmo.org/dataset/782839 | https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_782839.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_782839&showErrors=false&email= | BCO-DMO | bcodmo_dataset_782839 |