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griddap Subset tabledap Make A Graph wms files Accessible Title Summary FGDC ISO 19115 Info Background Info RSS Email Institution Dataset ID
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_916134_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_916134_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_916134_v1/ public [Substrate-specific metabolic responses of model marine bacteria] - Metadata for transcriptomic expression data from cultures of Ruegeria pomeroyi DSS-3 and Alteromonas macleodii MIT1002 grown in defined culture media with either glucose, acetate, or a mix of both as carbon substrates (C-CoMP Model Bacteria Physiological Studies) This dataset includes metadata for transcriptomic expression data from cultures of Ruegeria pomeroyi DSS-3 and Alteromonas macleodii MIT1002. These model marine bacteria were grown in defined culture media with either glucose, acetate, or a mix of both as carbon substrates. The data are sampled so as to capture the metabolic differences the bacteria employ when catabolizing these different substrates and when switching between them. The raw RNA sequences (50 bp reads in fastq format) have been submitted to the National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA) under BioProject PRJNA972985 (https://www.ncbi.nlm.nih.gov/bioproject/972985).\n\ncdm_data_type = Other\nVARIABLES:\nSample_Name (unitless)\nAccession (unitless)\nBioProject (unitless)\nOrganism (unitless)\nStrain (unitless)\nTax_ID (unitless)\nGlucose_initial_concentration_uM (micromolar concentration)\nAcetate_initial_concentration_uM (micromolar concentration)\nSample_description (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_916134_v1/index.htmlTable https://www.bco-dmo.org/dataset/916134 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_916134_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_916134_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_916134_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_782301.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_782301 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_782301.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_782301/ public [Synechococcus accessions] - NCBI accessions for raw genomic sequence data of 11 new isolates of marine Synechococcus from Naragansett Bay, July 2017 (Dimensions: Collaborative Research: Genetic, functional and phylogenetic diversity determines marine phytoplankton community responses to changing temperature and nutrients) NCBI accessions for raw genomic sequence data of 11 new isolates of marine Synechococcus from Naragansett Bay.\n\ncdm_data_type = Other\nVARIABLES:\nAccession (unitless)\nSample_Name (unitless)\nSPUID (unitless)\nOrganism (unitless)\nTax_ID (unitless)\nIsolate (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndepth (m)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_782301_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_782301/index.htmlTable https://www.bco-dmo.org/dataset/782301 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_782301.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_782301&showErrors=false&email= BCO-DMO bcodmo_dataset_782301
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_739636.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_739636 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_739636/ public [Thaumarchaea transcriptomes] - Nitrosopelagicus brevis CN25 and U25 grown in nitrogen replete and deplete conditions, with subsequent transcriptome sequencing and identification. (Gene content, gene expression, and physiology in mesopelagic ammonia-oxidizing archaea) Nitrosopelagicus brevis CN25 and U25 were grown in nitrogen replete and deplete conditions, with subsequent transcriptome sequencing.\n\ncdm_data_type = Other\nVARIABLES:\nAccession (unitless)\nSample_Name (unitless)\nOrganism (unitless)\nTax_ID (unitless)\nStrain (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_739636/index.htmlTable https://www.bco-dmo.org/dataset/739636 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_739636.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_739636&showErrors=false&email= BCO-DMO bcodmo_dataset_739636
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_949777_v1 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_949777_v1/ public [Transcriptomics of Phytoplankton Cultures Grown on Various Phosphorus Sources] - Transcriptomics of phytoplankton cultures grown on various phosphorus sources in a laboratory experiment (Phosphonate Utilization by Eukaryotic Phytoplankton: Who, How, and Where?) A laboratory experiment was carried out to characterize the growth and physiological response of three species of eukaryotic phytoplankton grown with inorganic phosphate (+P), without phosphate (-P), and with methylphosphonate (+MPN) and aminoethylphosphonate (+AEPN) as the sole sources of phosphorus (P). Data reported in this dataset are the transcriptomic reads, in biological triplicate, of these culture growth substrate combinations.\n\ncdm_data_type = Other\nVARIABLES:\nBioProject (unitless)\nBiosample (unitless)\nTreatment (unitless)\nReplicate (unitless)\nOrganism (unitless)\nTax_ID (unitless)\nStrain (unitless)\nURL (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_949777_v1/index.htmlTable https://www.bco-dmo.org/dataset/949777 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_949777_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_949777_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_949777_v1

 
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