Accessing BCO-DMO data
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BCO-DMO ERDDAP
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| griddap | Subset | tabledap | Make A Graph | wms | files | Accessible | Title | Summary | FGDC | ISO 19115 | Info | Background Info | RSS | Institution | Dataset ID | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_683186 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_683186.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_683186/ | public | [Egg sizes and macromere allocation] - Egg sizes and macromere allocation for diverse annelids and molluscs (Feeding by the ciliated larvae of marine invertebrates: effects of diverse particle capture mechanisms on feeding performance) | Egg sizes and macromere allocation for annelids and molluscs used in a comparative analysis of allocation of cytoplasm to macromeres. Many of these data were obtained from the literature, but some were obtained directly by the authors.\n\ncdm_data_type = Other\nVARIABLES:\ntaxon (unitless)\nspecies (unitless)\nnutrition (unitless)\ntaxa (unitless)\negg_diameter (micrometers (um))\negg_volume (cubic micrometer (um3))\nallocation (unitless)\nalloc_pcnt (unitless)\nlog_egg_diameter (micrometers (um))\nlog_egg_volume (cubic micrometer (um3))\nlogit_allocation (unitless)\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_683186/index.htmlTable | https://www.bco-dmo.org/dataset/683186
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_683186.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_683186&showErrors=false&email= | BCO-DMO | bcodmo_dataset_683186 | |||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2797 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_2797.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_2797/ | public | [inshore_catch] - Maine/New Hampshire Inshore Trawl Survey: Catch Data from the F/V Robert Michael,F/V Tara Lynn NEC-JS2000-1 from the the Maine and New Hampshire coasts, 2000-2004 (NEC-CoopRes project) (Northeast Consortium: Cooperative Research) | Maine/New Hampshire Inshore Trawl Survey: Catch Data from the F/V Robert Michael,F/V Tara Lynn NEC-JS2000-1 from the the Maine and New Hampshire coasts, 2000-2004 (NEC-CoopRes project)\n\ncdm_data_type = Other\nVARIABLES:\nyear\nseason\nregion\ntowid\nlatitude (degrees_north)\nlongitude (degrees_east)\ndepth_fm (Depth)\ngrid\ndepth_strata (Depth)\nfishid\ntaxa\nweight_kg_total\nnum_caught\ncommon_name\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_2797_fgdc.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_2797/index.htmlTable | https://www.bco-dmo.org/dataset/2797
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_2797.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_2797&showErrors=false&email= | BCO-DMO | bcodmo_dataset_2797 | ||||
| log in | [Integrated Energy Density data of Marine and Freshwater Organisms] - Marine and Freshwater Energy Density Data Integrated and Organized by Taxonomy from Previous Research Sources (1961 through June 2024) Discovered by a Literature Review (Nutritional ecology of climate change: Impacts on Northwest Atlantic fishes) | Energy is the currency of exchange within ecosystems which defines the strength and influence of interactions, particularly between predator and prey. The ability to estimate the productivity of an ecosystem is, therefore, dependent upon the estimation of consumer diet contents and their energetic quality. To estimate growth, reproduction, and, ultimately, survival of individuals, measures of prey quality for predators are essential both at the individual level and for scaling to ecosystem-wide fluxes and pools. Among measures of prey quality, energy density (kiloJoules per gram; kJ/g) is the most used in ecology. Considerable efforts have established estimates of energy densities for many aquatic taxa. However, a database of aquatic organism energetics constructed by integrating and organizing across multiple sources spawning marine and freshwater habitats across the globe is needed to add both depth (more samples to measure within-taxa variation) and breadth (more taxa). To generate a comprehensive energy density database of aquatic organisms, we performed a multifaceted review to find sources from the peer-reviewed and grey literature with a broad search on Web of Science, from citations of related literature, and a haphazard recommendation from experts. Estimates of energy density of whole organism live weights (kJ/g wet weight) were prioritized to better relate to diet and energetics studies. When energy density was only provided per gram dry weight, the dry weight and percentage water was used to calculate energy density per gram wet weight. Sub-organism (i.e. tissue specific) energy density estimates are included (e.g. muscle, liver, egg) when only these were reported. A total of 3810 records are included from 134 sources, covering 2016 unique taxa, of which 1771 (87.76%) are identified at the species level. Species or taxa-specific energy densities ranged from 0.015 to 17.949 kJ/g wet weight (WW) with a mean ± SD = 4.509 ± 1.94 kJ/g WW and median = 4.225 kJ/g WW. Among those phyla with more than three species (n phyla = 9), chordates (n taxa = 1283) had the highest average energy density (mean ± SD; 4.92 ± 1.90; 0.162 – 17.9 kJ/g WW) and ctenophores (n taxa = 4) had the lowest average (0.0988 ± 0.074; 0.03 to 0.205 kJ/g WW). Each record includes the organism taxonomy to the lowest resolution listed in the original source, energetic data available from the source including body composition and energy density data, number of replicates and methodology for measuring energetics information--primarily split between bomb calorimetry and proximate composition--as well as the source's author(s), year, and publication. Additional meta-data are included whenever possible based on details from the original source including the 1) environmental features: area, method, and timing of capture; 2) methodological features: storage method, storage duration, and tissue type measured; and 3) organismal features: weight, length, and sex; as well as any additional notes about the source. This comprehensive database integrates those data discoverable by our search and which met inclusion criteria identified above in a taxonomic and spatial organization framework to facilitate modeling trophic interactions, bioenergetics, growth, productivity, and energy fluxes through marine and freshwater ecosystems.\n\ncdm_data_type = Other\nVARIABLES:\nPhylum (unitless)\n... (41 more variables)\n | BCO-DMO | bcodmo_dataset_948253_v1 | ||||||||||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_560342 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_560342.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_560342/ | public | [Northeast US Adult Fish] - Abundance and proportion of adult fish species of the Northeast U.S. Shelf; bottom trawl surveys were conducted by the Northeast Fisheries Science Center (NEFSC) during 1977-1987 and 1999-2008 (Northeast Fisheries Science Center Bottom Trawl Survey) | Abundance and proportion of adult fish species of the Northeast U.S. Shelf; bottom trawl surveys were conducted by the Northeast Fisheries Science Center (NEFSC) during 1977-1987 and 1999-2008.\n\ncdm_data_type = Other\nVARIABLES:\ntaxa (text)\nyear (dimensionless)\nseason (dimensionless)\nstrata (dimensionless)\nlatitude (degrees_north)\nlongitude (degrees_east)\narea (square kilomters (km^2))\nmean_abund (mean number of adults)\nrel_proportion (percentage (%))\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_560342_fgdc.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_560342/index.htmlTable | https://www.bco-dmo.org/dataset/560342
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_560342.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_560342&showErrors=false&email= | BCO-DMO | bcodmo_dataset_560342 | ||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_560448 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_560448.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_560448/ | public | [Northeast US Ichthyoplankton] - Abundance and proportion of ichthyoplankton of the Northeast U.S. Shelf from surveys conducted during the MARMAP (1977-1987) and EcoMon (1999-2008) programs. (Northeast Fisheries Science Center Ichthyoplankton Collection) | Abundance and proportion of ichthyoplankton of the Northeast U.S. Shelf. Ichthyoplankton data from several surveys conducted during the Marine Resources Monitoring, Assessment, and Prediction (MARMAP; 1977-1987) and Ecosystem Monitoring (EcoMon; 1999-2008) programs.\\r\\n\\r\\nThe Northeast Fisheries Science Center (NEFSC) has conducted several ichthyoplankton collection programs on the NEUS Shelf over the past forty years including the Marine Resources Monitoring, Assessment, and Prediction program (MARMAP, 1977 - 1987) and Ecosystem Monitoring (EcoMon, 1999 - present) program (Richardson et al. 2010). Both MARMAP and EcoMon were designed as multi-species plankton surveys, and sampling effort covered the entire NEUS Shelf from Cape Hatteras, North Carolina, to Cape Sable, Nova Scotia (Figure 1, Sibunka and Silverman 1984, 1989; Richardson et al. 2010).\n\ncdm_data_type = Other\nVARIABLES:\ntaxa (text)\nyear (dimensionless)\nseason (dimensionless)\nstrata (dimensionless)\nlatitude (degrees_north)\nlongitude (degrees_east)\narea (square kilomters (km^2))\nmean_abund (mean number of adults)\nrel_proportion (percentage (%))\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_560448_fgdc.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_560448/index.htmlTable | https://www.bco-dmo.org/dataset/560448
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_560448.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_560448&showErrors=false&email= | BCO-DMO | bcodmo_dataset_560448 | ||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774033 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774033.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_774033/ | public | [PUA Microzooplankton Biomass] - Microzooplankton biomass estimates from PUA (polyunsaturated aldehydes) experiments, Virginia Coastal Bays and Bay of Napoli, Mar-July 2015 (The effects of diatom-produced polyunsaturated aldehydes on the microbial food web in temperate and polar waters) | Microzooplankton biomass estimates from PUA (polyunsaturated aldehydes) experiments, Virginia Coastal Bays and Bay of Napoli, Mar-July 2015.\n\ncdm_data_type = Other\nVARIABLES:\nExperiment (unitless)\nBottle_ID (unitless)\nTreatment (unitless)\nRep (unitless)\nTaxa (unitless)\nPhylum (unitless)\nESD (micrometers)\nBiomass (micrograms carbon/liter)\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_774033/index.htmlTable | https://www.bco-dmo.org/dataset/774033
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_774033.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_774033&showErrors=false&email= | BCO-DMO | bcodmo_dataset_774033 | |||||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_784927.subset | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_784927 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_784927.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_784927/ | public | [SMURF faunal settlement] - Collections of fish and invertebrates settled in artificial seagrass landscapes (Collaborative Research: Habitat fragmentation effects on fish diversity at landscape scales: experimental tests of multiple mechanisms) | Collections of fish and invertebrates settles in artificial seagrass landscapes collected between June and August 2018\n\ncdm_data_type = Other\nVARIABLES:\nSample_ID (unitless)\nLandscape_type (unitless)\nPercent_cover_treatment (percentage (%))\nFragmentation_treatment (unitless)\nSite (unitless)\nPick_up_date (unitless)\nPick_up_time (unitless)\nGear (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nProcessed_by (unitless)\nTaxa (unitless)\nSize (millimeter (mm))\nLarvae_settler (unitless)\nN (unitless)\nNotes (unitless)\ntime (Pick Up Date Time UTC ISO, seconds since 1970-01-01T00:00:00Z)\n | https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_784927_fgdc.xml | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_784927/index.htmlTable | https://www.bco-dmo.org/dataset/784927
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_784927.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_784927&showErrors=false&email= | BCO-DMO | bcodmo_dataset_784927 | |||
| https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_915900_v1 | https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_915900_v1.graph | https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_915900_v1/ | public | [Zooplankton abundance and size from Bongo plankton net tows] - Zooplankton abundance and size data from Bongo plankton net tows conducted in the subtropical Southern California Bight during February and April 2021 (RAPID: Understanding the unprecedented anchovy response to warm-water conditions in the California Current) | This dataset includes zooplankton abundance and size from Bongo plankton net tows conducted in the subtropical Southern California Bight during February and April 2021. Net tows were carried out on several cruises aboard R/V Bob and Betty Beyster and R/V Shearwater.\n\ncdm_data_type = Other\nVARIABLES:\nCruise (unitless)\ntime (Iso_datetime_utc, seconds since 1970-01-01T00:00:00Z)\nISO_DateTime_PDT (unitless)\nLine (unitless)\nSt (unitless)\nLat (degrees_north)\nlongitude (Long, degrees_east)\nTow_depth (meters (m))\nMesh_size (micrometers (um))\nTaxa (unitless)\nDevelopment_stage (unitless)\nind_per_cubic_m (individuals per cubic meter)\nAvg_length (micrometers (um))\nSD_length (micrometers (um))\nAvg_width (micrometers (um))\nSD_width (micrometers (um))\nNum_Measured (unitless)\n | https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_915900_v1/index.htmlTable | https://www.bco-dmo.org/dataset/915900
| https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_915900_v1.rss | https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_915900_v1&showErrors=false&email= | BCO-DMO | bcodmo_dataset_915900_v1 |