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log in [A scandium incubation experiment during the PUPCYCLE I cruise in the California Current System in 2019] - Dissolved and particulate Fe and Sc concentrations, chlorophyll, nutrients from a scandium incubation experiment during the PUPCYCLE I R/V Oceanus cruise 1905B in the California Current System in 2019 (CAREER: An integrated molecular and physiological approach to examining the dynamics of upwelled phytoplankton in current and changing oceans) We performed an incubation experiment with added dissolved scandium and/or iron in waters sampled in the California Current System during the PUPCYCLE I cruise in 2019 with Chief Scientist Adrian Marchetti. PUPCYCLE I (Phytoplankton response to the UPwelling CYCLE) took place in summer 2019 onboard the R/V Oceanus (OC 1905b). Water for the incubation was collected from 15 m just off the Big Sur coast 2 June 2019. This was in a region with an extremely narrow shelf. There were five total treatments run in triplicate: control (no addition), +5 nmol/kg dissolved Fe, +5 nmol/kg dissolved Sc, +5 nmol/kg dissolved Fe and +5 nmol/kg dissolved Sc, and filtered seawater with +5 nmol/kg dissolved Fe and +5 nmol/kg dissolved Sc. After 24 hours incubating, the incubation was harvested and analyzed for chlorophyll, nutrients, and dissolved and particulate Fe and Sc concentrations. The effort was to investigate similarities and differences in the oceanic chemical cycling of Fe and Sc.\n\ncdm_data_type = Other\nVARIABLES:\nLabel (unitless)\nTimepoint (hours)\nTreatment (unitless)\nReplicate (unitless)\nChl_gt_5um (micrograms per liter (ug/L))\nChl_gt_0pt7um (micrograms per liter (ug/L))\nNO3 (micromolar (uM))\nPO4 (micromolar (uM))\nSiO2 (micromolar (uM))\ndissolved_Fe (nanomoles per kilogram (nmol/kg))\ndissolved_Sc (picomoles per kilogram (pmol/kg))\ndissolved_Sc_flag (unitless)\n BCO-DMO bcodmo_dataset_940093_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_922006_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_922006_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_922006_v1/ public [Acropora cervicornis white band exposure experiment survival outcomes] - Acropora cervicornis genomic/trancriptomic sequence accessions with associated data on tank exposure to white band disease and survival outcomes with corals collected from Florida, USA and Bocas del Toro, Panama in 2021 (Multi-omic bases of coral disease resistance) Genomic data was collected from 96 Acropora cervicornis samples, 48 of which were collected from the Coral restoration foundation nursery in Florida in June 2021 and the other 48 were collected from Bocas del Toro Panama in November 2021. All samples were sequenced using illumina short read sequencing to create whole genome sequencing profiles of the DNA with one of the Florida samples, the K2 genotype, being sequenced using additional Nanopore long reads to assemble and annotate an A. cervicornis genome. All genotypes were used in a disease exposure assay to assess individual genotype disease resistance with a further, 16 colonies from Florida being sequenced at two timepoints across disease exposed and healthy colonies (total 48 sequences) using RNAseq to identify patterns in differential gene expression based on disease resistance.\n\nThis dataset includes sample metadata, treatment information, and disease state for corals in the exposure experiment. Sample metadata and accession identifiers for sequences at The National Center for Biotechnology Information (NCBI) are included as a supplemental file.\n\ncdm_data_type = Other\nVARIABLES:\nTank (untiless)\nTreatment (untiless)\nLocation (untiless)\nGenotype (untiless)\nDay_1_AM (untiless)\nDay_1_PM (untiless)\nDay_2_AM (untiless)\nDay_2_PM (untiless)\nDay_3_AM (untiless)\nDay_3_PM (untiless)\nDay_4_AM (untiless)\nDay_4_PM (untiless)\nDay_5_AM (untiless)\nDay_5_PM (untiless)\nDay_6_AM (untiless)\nDay_6_PM (untiless)\nDay_7_AM (untiless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_922006_v1/index.htmlTable https://www.bco-dmo.org/dataset/922006 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_922006_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_922006_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_922006_v1
log in [Adult black sea bass winter survival and lipid dynamics: Laboratory-mesocosm experiment] - Adult Black Sea Bass (Centropristis striata) winter survival and lipid accumulation under varying diet and temperature conditions from a laboratory mesocosm experiment (Oct 2022 to Apr 2023) with individuals collected in Long Island Sound (Collaborative research: The genomic underpinnings of local adaptation despite gene flow along a coastal environmental cline) This dataset contains measurements from a laboratory mesocosm experiment (Oct 2022 to Apr 2023) with adult Black Sea Bass (Centropristis striata) collected in Long Island Sound.  Fish in this experiment were collected concurrently with fish sampled for a related wild-caught dataset (see 'Related Datasets' section).\n\nStudy description:\n\nWe experimentally examined overwintering potential of adult Black Sea Bass (Centropristis striata), an ecologically and economically important fish that seasonally migrates from offshore overwintering grounds to coastal feeding and nursery areas. We collected adults from Long Island Sound in September 2022 and reared them in a laboratory-mesocosm experiment under a contemporary seasonal temperature profile for Long Island Sound (LIS; October 2022 – April 2023) to assess their potential to survive and accumulate lipids throughout the winter. We also fed experimental adults two diet items (blue mussels and Atlantic herring), which are commonly found in Long Island Sound. \n\nIn addition, we sampled fish from the same reef in LIS at the start (October) and end (April) of the experiment to identify lipid dynamics in wild fish that migrate offshore (see \"Related Datasets\" section for wild fish data). Experimental C. striata growth throughout the winter was negligible with high mortality (> 50% observed). \n\nWhile survivors fed herring had higher tissue lipid contents, mortality was 2x higher than for fish fed mussels. In contrast, to the experimental fish, wild-captured fish in the spring had higher gonadosmatic indices than that for survivors across both diet treatments, which was most similar to fall-captured fish. While some fish survived throughout the winter, current winter bottom temperatures still preclude a year-round C. striata presence within Long Island Sound. Overwintering inshore is still disadvantageous compared to seasonally migrating due to surviving experimental fish having lower gonadosomatic indices, suggesting that the offshore overwintering period is a time to build energy reserves. However, as coastal waters continue to warm, changing conditions could lead populations to become year-round residents of Long Island Sound, thus increasing C. striata abundance.\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\n... (44 more variables)\n BCO-DMO bcodmo_dataset_938004_v1
log in [Algal Ash-Free Dry Weight - Cerro Mundo 2] - Nearshore Shallow Subtidal Macroalgal Preburn, Postburn and Ash-Free Dry Weight Data from October 2022 (Galapagos 2021 project) (Temperature Regulation of Top-Down Control in a Pacific Upwelling System) Increased standing macroalgal biomass in upwelling zones is generally assumed to be the result of higher nutrient flux due to upwelled waters, However, other factors can strongly impact macroalgal communities. For example, herbivory and temperature, via their effects on primary producers and the metabolic demands of consumers, can also influence macroalgal biomass and productivity, respectively.  Although there is a fair number of studies looking at the interactive effects of herbivores and nutrients in both tropical and temperate regions, there is a lack of studies looking at these effects in tropical or subtropical upwelling regions. The purpose of this study was to measure the effects that herbivores, temperature, and nutrient availability have on standing macroalgal biomass. We manipulated nutrient availability and herbivory in six field experiments during contrasting productivity and thermal regimes (cool-upwelling and warm, non-upwelling season) on a subtidal nearshore rocky reef. \n\nHere, we present the macroalgal biomass raw data (Preburn, Postburn, and Ash-Free Dry Weight) collected in the nearshore shallow subtidal during an October 2022 field experiment.\n\ncdm_data_type = Other\nVARIABLES:\nCage (unitless)\nTreatment (unitless)\nN (unitless)\nAlgae_Type (unitless)\nFoil_cup_weight_g (grams)\nSample_and_foil_cup_weight_g (grams)\nPreburn_weight_calculation_g (grams)\nCeramic_cup_weight_g (grams)\nSample_and_ceramic_cup_weight_g (grams)\nPostburn_weight_calculation_g (grams)\nAFDW_Preburn_minus_Postburn_weight_calculation_g (grams)\n BCO-DMO bcodmo_dataset_904710_v1
log in [Algal consumption data: Tegula with Pisaster ochraceus as the predator] - Algal consumption data from Tegula in the presence of the predator Pisaster ochraceus, displaying anti-predatory responses or not within mesocosms at Bodega Marine Lab in 2018 (Trophic consequences of ocean acidification: Intertidal sea star predators and their grazer prey) To examine the impacts of fear removal on the strength of trophic cascades, we measured the amount of algae (Ulva spp.) consumed by Tegula funebralis that either displayed either an anti-predatory response to its predators, Pisaster ochraceus and Cancer productus, or ignored the predators. Additionally, we used two species of predators with differing consumption rates to test how predator traits might mediate the effect of removal on trophic cascade strength. The experiment was conducted within laboratory mesocosms at Bodega Marine Lab in 2018.\n\nThis dataset reports results for experiments with Cancer productus as the predator.  See \"Related Datasets\" section for results from the experiments with Pisaster ochraceus as the predator.\n\ncdm_data_type = Other\nVARIABLES:\ndate (unitless)\ntime_local (Time, unitless)\ntime (Iso_datetime_utc, seconds since 1970-01-01T00:00:00Z)\npisaster (unitless)\npisaster_size (unitless)\ncontainer (unitless)\nseatable (unitless)\nTreatment (unitless)\nsnail (unitless)\nstart (grams (g))\nend (grams (g))\nalgae_consumed (grams (g))\nDay (count (days))\n BCO-DMO bcodmo_dataset_947757_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_715856 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_715856.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_715856/ public [Algal treatments] - Treatment description and growth parameters for Thalassiosira weissflogii generating d13C-AA, collected on R/V Meteor M77 in the Peruvian ocean margin from November to December 2008. (The Use of Nitrogen Isotopes of Amino Acids To Understand Marine Sedimentary 15N Records) Treatment description and growth parameters for Thalassiosira weissflogii generating d13C-AA, collected on R/V Meteor M77 in the Peruvian ocean margin from November to December 2008.\n\ncdm_data_type = Other\nVARIABLES:\nID (unitless)\nTreatment (unitless)\nTemp (Temperature, celsius)\nLight (umol/square meter/second)\nLight_cycle (D/L (h))\nSalinity (Sea Water Practical Salinity, PSU)\npH_init (P H Init, pH)\npH_term (P H Term, pH)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_715856/index.htmlTable https://www.bco-dmo.org/dataset/715856 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_715856.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_715856&showErrors=false&email= BCO-DMO bcodmo_dataset_715856
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_715936 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_715936.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_715936/ public [Amino acid d13C values of Thalassiosira weissflogii] - Amino acid d13C values of Thalassiosira weissflogii of ten different treatments; collections from R/V Meteor M77 in the Peruvian ocean margin from November to December 2008. (The Use of Nitrogen Isotopes of Amino Acids To Understand Marine Sedimentary 15N Records) Amino acid d13C values of Thalassiosira weissflogii of ten different treatments; collections from R/V Meteor M77 in the Peruvian ocean margin from November to December 2008.\n\ncdm_data_type = Other\nVARIABLES:\nTreatment (unitless)\nThr (per mil)\nThr_st_dev (per mil)\nAsx (per mil)\nAsx_st_dev (per mil)\nLys (per mil)\nLys_st_dev (per mil)\nIle (per mil)\nIle_st_dev (per mil)\nMet (per mil)\nMet_st_dev (per mil)\nAla (per mil)\nAla_st_dev (per mil)\nVal (per mil)\nVal_st_dev (per mil)\nLeu (per mil)\nLeu_st_dev (per mil)\nArg (per mil)\nArg_st_dev (per mil)\nGlx (per mil)\nGlx_st_dev (per mil)\nTyr (per mil)\nTyr_st_dev (per mil)\nPhe (per mil)\nPhe_st_dev (per mil)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_715936/index.htmlTable https://www.bco-dmo.org/dataset/715936 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_715936.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_715936&showErrors=false&email= BCO-DMO bcodmo_dataset_715936
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_489420.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_489420 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_489420.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_489420/ public [ammonium removal by seaweeds] - Macroalgal contribution to NH4+ removal in tidepools from Cape Flattery, WA from 2010-2011 (Regenerated Nitrogen project) (The Role of Regenerated Nitrogen for Rocky Shore Productivity) We evaluated the role of mussels by adding 15N-labeled NH4+ to an assemblage\nof tidepools where they were either present at natural abundance levels, or\nabsent through manual removal. \\u00a0The role of phototrophs was separately\nexamined by conducting these experiments both during the day and at night.\n\\u00a0The tidal height of pools varied between 1.2 to 1.5 m above Mean Lower\nLow Water (MLLW). Tidepools were thus isolated from each other as well as the\nnearshore environment during the low tide period when experiments were\nconducted. Each experiment included 4 to 5 mussel removal (MR) tidepools\n(since 2002) and 4 to 5 mussel control (MC) tidepools with natural mussel\ndensities. \\u00a0In June 2010, we performed daytime NH4+ tracer experiments\nand in August 2010 nighttime experiments using the same tidepools. The\nfollowing year (July 2011) these experiments were repeated with the addition\nof bottle incubations (see below) to evaluate the effects of suspended\ntidepool components and extended sampling for 6 days after the initial 15N\naddition to test for long-term retention of NH4+. \\u00a0During the 2011\nexperiments, unforeseen rain reduced the salinity in some pools by up to 51%,\nand we have attempted to correct for the expected dilution of NH4+ in our\ntidepool rate calculations.\n \nBecause isotope enrichment levels were relatively low, we used the\nconventional delta notation instead of atom% to describe variations in 15N\nenrichment (where delta-15NH4+ = {(15N:14N sample \\u00f7 15N:14N standard)\n-1}\\u00d71000\\u2030, where the standard is atmospheric N2. \\u00a0Tracer\nlabeled ammonium chloride (15NH4Cl) was added to the pools to approximate a\n1000\\u2030 enrichment in 2010 (doubling the 15N-NH4+ concentration) and a\n2000\\u2030 enrichment in 2011(tripling the 15N-NH4+ concentration). 15N\nnatural abundance is only 0.365% and these tracer additions thus had a\nnegligible effect on the overall NH4+ concentrations increasing them by only\n~0.4% and ~0.8%, respectively. Tidepool volumes were estimated\nspectrophotometrically using varying concentrations of food dye (Pfister\n1995). Together with estimates of NH4+ concentration (from 2009 data), we\nestimated the tracer addition required to achieve the targeted 15N\nenrichments. However, the actual initial enrichments varied substantially,\n684.4 - 2406.4\\u2030 in 2010 and 781.4 - 3880.2\\u2030 in 2011, likely due to\nerror in tidepool volume estimation and natural variations in initial NH4+\nconcentrations. Fortunately, we sampled immediately following each tracer\naddition allowing for the determination of the true initial 15N enrichment.\n\\u00a0\n \nPrior to tracer addition at ebb tide, 100 mL of tidepool water was syringe-\nfiltered (Whatman GF/F) into separate HDPE bottles for natural abundance\n15NH4+ and concentration determination. \\u00a0To each pool, tracer 15NH4+ was\nthen added and distributed by stirring with a stick. Water samples were\nimmediately collected for measuring initial 15N enrichment and subsequently at\n2, 4, and 6 hour intervals to determine isotope and concentration time\ncourses. All water samples were frozen until analysis. Tidepool oxygen, pH,\nand temperature (Hach HQ4D) were also collected at ~ 2 h intervals throughout\nthe experiment.\n \nIn 2011 we also assessed the contribution of the suspended microbial community\nto NH4+ cycling by enclosing tidepool water in a 250 mL transparent\npolycarbonate incubation bottle. Following tracer addition, the bottle was\nfilled, then left to float in the tidepool for the duration of the experiment.\nSamples from bottles were filtered as described both immediately after\ncontainment and at the end of the experiment (~6 h later).\n \nWe assessed macroalgal contribution to NH4+ removal by transplanting two\ntidepool-dwelling algae species. \\u00a0Prionitis sternbergii were sampled 2\nweeks prior to the experiment for baseline natural abundance 15N values and\ntransplanted into the pools with Z-Spar Epoxy (Pfister 2007). On the day of\nthe experiment, the red-alga, Corallina vancouveriensis from a single source\npatch, was also sampled for 15N natural abundance, inserted into pieces of\nStyrofoam, and floated in each pool.\n \nAt the end of each experiment (~6 h sampling point), we sampled tidepool\nparticulate organic material (POM) by filtering through combusted GF/F filters\nuntil they clogged (~ 600 mL), comparing these samples with POM similarly\nsampled from the immediate nearshore. \\u00a0Floating Corallina spp. samples\nwere collected into clean Eppendorf tubes, and similar sized pieces of\nPrionitis spp. were collected from each pool into clean foil packets.\\u00a0  \n We evaluated the extent of longer-term 15N tracer retention in 2011 by\nsampling tidepool water, POM and transplanted Prionitis 1, 3, and 6 days\nfollowing tracer addition. We sampled at ebb tide and at again at slack water\njust prior to high tide on the first day after tracer addition (that is, 24 h\nlater) and at slack water prior to high tide on Day 3 and 6.\\u00a0\n \nRelevant References:\n \n2014\\. Pather, S., C. A. Pfister, M. Altabet, D. M. Post. Ammonium cycling in\nthe rocky intertidal: remineralization, removal and retention. Limnology and\nOceanography\n59:361-372.\\u00a0[http://aslo.org/lo/toc/vol_59/issue_2/0361.htm](\\\\http://aslo.org/lo/toc/vol_59/issue_2/0361.html\\\\)\n \nDOI for this dataset:\\u00a0The role of regenerated nitrogen for rocky shore\nproductivity, Cape Flattery, Washington, 2010 &\n2011.\\u00a0Handle:\\u00a0[http://hdl.handle.net/1912/6420](\\\\http://hdl.handle.net/1912/6420\\\\).\\u00a0DOI:10.1575/1912/6420\n \nRelated Datasets:  \n[filter tracer content](\\\\https://www.bco-dmo.org/dataset/489283\\\\)  \n[natural abundance N and C filter content](\\\\http://www.bco-\ndmo.org/dataset/489310\\\\)  \n[tidepool ammonium and mussels](\\\\https://www.bco-dmo.org/dataset/488860\\\\)  \n[tidepool incubation ammonium](\\\\https://www.bco-dmo.org/dataset/489085\\\\)\n\ncdm_data_type = Other\nVARIABLES:\nsite (unitless)\n... (10 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_489420_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_489420/index.htmlTable https://www.bco-dmo.org/dataset/489420 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_489420.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_489420&showErrors=false&email= BCO-DMO bcodmo_dataset_489420
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_780225 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_780225.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_780225/ public [AT39-01 CathodicEET Experiment Metadata] - Metadata for cathodic poised potential experiments with subsurface crustal samples from CORK borehole observatories at North Pond on the Mid-Atlantic Ridge during R/V Atlantis cruise AT39-01 (Collaborative Research: Completing North Pond Borehole Experiments to Elucidate the Hydrology of Young, Slow-Spread Crust) Metadata for cathodic poised potential experiments with subsurface crustal samples from CORK borehole observatories at North Pond on the Mid-Atlantic Ridge during R/V Atlantis cruise AT39-01.\n\ncdm_data_type = Other\nVARIABLES:\nExperimentID (Experiment ID, unitless)\nChannel (unitless)\nTreatment (unitless)\nFLOCSsubstrate (unitless)\nBorehole (unitless)\nFluidSource (Fluid Source, unitless)\nFLOCStype (unitless)\nFLOCSname (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nWaterDepth (Water Depth, meters (m))\nFLOCSdepth (meters below seafloor (m))\nFLOCSsourceDepth (FLOCSsource Depth, meters below seafloor (m))\nMediasourceDepth (Mediasource Depth, meters below seafloor (m))\nFLOCSdeploymentCruise (FLOCSdeployment Cruise, unitless)\nFLOCSrecoverCruise (FLOCSrecover Cruise, unitless)\nFluidcollectionCruise (Fluidcollection Cruise, unitless)\nFLOCSdeployDate (FLOCSdeploy Date, unitless)\nFLOCSrecoverDate (FLOCSrecover Date, unitless)\nFluidcollectionDate (Fluidcollection Date, unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_780225_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_780225/index.htmlTable https://www.bco-dmo.org/dataset/780225 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_780225.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_780225&showErrors=false&email= BCO-DMO bcodmo_dataset_780225
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_780261 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_780261.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_780261/ public [AT39-01 CathodicEET SEM] - Scanning Electron Microscopy (SEM) photographs of biofilms on indium tin oxide electrodes from cathodic poised potential experiments with subsurface crustal samples from CORK borehole observatories at North Pond on the Mid-Atlantic Ridge during R/V A (Collaborative Research: Completing North Pond Borehole Experiments to Elucidate the Hydrology of Young, Slow-Spread Crust) Scanning Electron Microscopy (SEM) photographs of biofilms on indium tin oxide electrodes from cathodic poised potential experiments with subsurface crustal samples from CORK borehole observatories at North Pond on the Mid-Atlantic Ridge during R/V Atlantis cruise AT39-01.\n\ncdm_data_type = Other\nVARIABLES:\nSampleID (Sample ID, unitless)\nExperimentID (Experiment ID, unitless)\nTreatment (unitless)\nimagename (unitless)\nFLOCSsubstrate (unitless)\nFLOCSdeployDate (FLOCSdeploy Date, unitless)\nFLOCSdepth (meters below seafloor (m))\nFLOCSrecoverDate (FLOCSrecover Date, unitless)\nFluidcollectionCruise (Fluidcollection Cruise, unitless)\nFluidcollectionDate (Fluidcollection Date, unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nWaterDepth (Water Depth, meters (m))\nimagelink (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_780261_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_780261/index.htmlTable https://www.bco-dmo.org/dataset/780261 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_780261.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_780261&showErrors=false&email= BCO-DMO bcodmo_dataset_780261
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_854887_v1 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_854887_v1/ public [Atlantic silverside RNA-seq reads] - Sample and genetic accession information for RNA-seq data from whole Atlantic silverside (Menidia menidia) larvae from two populations and their F1 hybrids reared under different temperatures in 2017 (Collaborative research: The genomic underpinnings of local adaptation despite gene flow along a coastal environmental cline) Sample and genetic accession information for RNA-seq data from whole Atlantic silverside (Menidia menidia) larvae from two populations and their F1 hybrids. Larvae were reared under two different temperatures to study temperature-dependent gene regulatory divergence between locally adapted Atlantic silverside populations in 2017. \n\nThe data are deposited in the National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA) with accession numbers SRR13523227- SRR13523268 associated with BioProject PRJNA694674 and BioSamples SAMN17531688 - SAMN17531729.\n\ncdm_data_type = Other\nVARIABLES:\nBioProject (unitless)\nBioSample (unitless)\nSample_name (unitless)\nSRA (unitless)\ntaxonomy_id (unitless)\ntaxonomy_name (unitless)\necotype (unitless)\ndev_stage (unitless)\nsex (unitless)\ntissue (unitless)\nsample_type (unitless)\ncross (unitless)\ntreatment (degrees Celsius)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_854887_v1/index.htmlTable https://www.bco-dmo.org/dataset/854887 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_854887_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_854887_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_854887_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_518427 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_518427.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_518427/ public [BIB Experiments] - Experimental results: Bloom in Bottle (BIB) experiments: culture studies of the effect of Si and N stress on diatoms of the Santa Barbara Channel (SBDOM project, SBC LTER) (Mechanisms controlling the production and fate of DOM during diatom blooms) Culture studies of diatoms that dominate spring blooms in the Santa Barbara Channel were used to examine the effects of N and Si stress on the magnitude of production and the chemical composition of DOM. Species cultured were: Skeletonema costatum (CCMP 1332), Chaetoceros socialis (CCMP 172), Thalassiosira weissflogii (CCMP 1051), and Odontella aurita (CCMP 595).\n\ncdm_data_type = Other\nVARIABLES:\nspecies (text)\ndate_start (unitless)\ndate_end (unitless)\ntreatment (text)\ntime_point (alphanumeric)\nnominal_hrs (integer)\nreplicate (1 or 2)\nchl (micrograms per Liter (ug L-1))\nphyt_abun (cells per milliliter (cells/mL))\nphyt_abun_sd (cells per milliliter (cells/mL))\nNO3 (Mole Concentration Of Nitrate In Sea Water, micromolar (uM))\nSi (Mass Concentration Of Silicate In Sea Water, micromolar (uM))\nSi_bio (Mass Concentration Of Silicate In Sea Water, micromolar (uM))\nprim_prod (micromoles Carbon per Liter per day (uMol C L-1 d-1))\nER (micromoles Carbon per Liter per day (uMol C L-1 d-1))\nPOC (Particulate Organic Carbon, micromolar (uM))\nDOC (micromolar (uM))\nDOC_sd (micromolar (uM))\nTEP ((uXeq L-1))\nTEP_sd ((uXeq L-1))\nBP (picomoles per Liter per hour (pmol L-1 h-1))\nBP_sd (picomoles per Liter per hour (pmol L-1 h-1))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_518427/index.htmlTable https://www.bco-dmo.org/dataset/518427 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_518427.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_518427&showErrors=false&email= BCO-DMO bcodmo_dataset_518427
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_920168_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_920168_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_920168_v1/ public [Bulk cyclic AMP (cAMP) assays] - Results from bulk cyclic AMP (cAMP) assays conducted to investigate the role of soluble adenylyl cyclase (sAC) in sperm from the gonochoric, broadcast spawning coral Astrangia poculata (Influence of environmental pH variability and thermal sensitivity on the resilience of reef-building corals to acidification stress) Most stony corals liberate their gametes into the water column via broadcast spawning, where fertilization hinges upon the activation of directional sperm motility. Sperm from gonochoric and hermaphroditic corals display distinct morphological and molecular phenotypes, yet it is unknown whether the signallng pathways controlling sperm motility are also distinct between these sexual systems. We addressed this knowledge gap using the gonochoric, broadcast spawning coral Astrangia poculata. This dataset is from bulk cyclic AMP (cAMP) assays conducted to investigate the role of soluble adenylyl cyclase (sAC) in sperm. Data are associated with Glass et al. (2023) Proceedings of the Royal Society B (10.1098/rspb.2023.0085). These data are also published in Dryad under DOI 10.5061/dryad.rn8pk0pg8.\n\ncdm_data_type = Other\nVARIABLES:\nColony (unitless)\ntime_elapsed (Time, seconds)\nTreatment (unitless)\nStim (unitless)\ncAMP_pmol_mL (picomoles per milliliter (pmol/mL))\nProtein_ug_mL (micrograms per milliliter (ug/mL))\ncAMP_nmol_mg (nanomoles per milligram (nmol/mg))\ncAMP_nmol_ng (nanomoles per nanomgram (nmol/ng))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_920168_v1/index.htmlTable https://www.bco-dmo.org/dataset/920168 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_920168_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_920168_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_920168_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_778926 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_778926.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_778926/ public [C:N in evolved and control populations] - C:N ratios of two heat‐tolerant populations of Chaetoceros simplex and control and ancestral populations, at different temperatures (Dimensions: Collaborative Research: Genetic, functional and phylogenetic diversity determines marine phytoplankton community responses to changing temperature and nutrients) C:N ratios of the two 34C\\u2010tolerant populations of Chaetoceros simplex and control and ancestral populations, at different temperatures.\n\ncdm_data_type = Other\nVARIABLES:\ntreatment (unitless)\nTemperature (Celsius degrees)\nCN_ratio (percent)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_778926/index.htmlTable https://www.bco-dmo.org/dataset/778926 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_778926.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_778926&showErrors=false&email= BCO-DMO bcodmo_dataset_778926
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_928636_v1 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_928636_v1/ public [Ca. Aquarickettsia rohweri transcriptomes] - Sampling and experimental metadata related to 'Candidatus' Aquarickettsia rohweri transcriptome data from host Acropora cervicornis colonies collected at Looe Key, Lower Florida Keys from Apr to Jun of 2019 (Collaborative Research: Tracking the interacting roles of the environment, host genotype, and a novel Rickettsiales in coral disease susceptibility) This dataset contains sampling and experimental metadata related to 'Candidatus' Aquarickettsia rohweri transcriptome sequences housed at the National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA) under BioProject PRJNA1048415. All host colonies (Acropora cervicornis genotype ML-50) were collected from the same location, the Mote Marine Laboratory in situ coral nursery in Looe Key, Lower Florida Keys between April and June of 2019.\n\nThe Rickettsiales-like bacterial parasite, 'Candidatus' Aquarickettsia rohweri (NCBI:txid2602574) is a ubiquitous coral symbiont that is strongly linked to coral disease susceptibility in staghorn coral, and is undergoing positive selection across the Caribbean. Although ‘Ca.' A. rohweri is a putative parasite, little is known about the activity of this bacterium in coral tissue. We performed a transcriptomic analyses of ‘Ca.' A. rohweri populations during a 6-week nutrient exposure experiment.  ‘Ca.' A. rohweri energy scavenging genes and those potentially involved during habitat transition are significantly upregulated during enrichment. Specifically, transcripts involved in signaling, virulence, two-component systems, and nutrient import genes are elevated under higher nutrients. These data support the predicted role of ‘Ca.' A. rohweri as a highly active nutrient-responsive A. cervicornis parasite and provide a glimpse at the mechanism of induced disease susceptibility while implicating nutrient exposure in its horizontal transmission.\n\ncdm_data_type = Other\nVARIABLES:\nSample_name (unitless)\nBioSample_Accession (unitless)\nSRA (unitless)\nBioProject (unitless)\nData_Type (unitless)\nScope (unitless)\nOrganism (unitless)\nCollected_Host_Organism (unitless)\nStrain (unitless)\nisolation_source (unitless)\nCollection_Year (unitless)\nCollection_date_note (unitless)\nTreatment (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_928636_v1/index.htmlTable https://osprey.bco-dmo.org/dataset/928636 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_928636_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_928636_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_928636_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_777144 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_777144.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_777144/ public [Carbonate Chemistry - pCO2 x DO effects on Menidia menidia] - Carbonate chemistry data from static and fluctuating pCO2 x dissolved oxygen (DO) experiments on Menidia menidia (Collaborative research: Understanding the effects of acidification and hypoxia within and across generations in a coastal marine fish) Coastal ecosystems experience substantial natural fluctuations in pCO2 and dissolved oxygen (DO) conditions on diel, tidal, seasonal and interannual timescales. Rising carbon dioxide emissions and anthropogenic nutrient input are expected to increase these pCO2 and DO cycles in severity and duration of acidification and hypoxia. How coastal marine organisms respond to natural pCO2 \\u00d7 DO variability and future climate change remains largely unknown. Here, we assess the impact of static and cycling pCO2 \\u00d7 DO conditions of various magnitudes and frequencies on early life survival and growth of an important coastal forage fish, Menidia menidia. Static low DO conditions severely decreased embryo survival, larval survival, time to 50% hatch, size at hatch and post-larval growth rates. Static elevated pCO2 did not affect most response traits, however, a synergistic negative effect did occur on embryo survival under hypoxic conditions (3.0 mg L-1). Cycling pCO2 \\u00d7 DO, however, reduced these negative effects of static conditions on all response traits with the magnitude of fluctuations influencing the extent of this reduction. This indicates that fluctuations in pCO2 and DO may benefit coastal organisms by providing periodic physiological refuge from stressful conditions, which could promote species adaptability to climate change.\n\ncdm_data_type = Other\nVARIABLES:\nExperiment (unitless)\nExperiment_descrip (unitless)\nTreatment (unitless)\nCycling_Pattern (unitless)\nMetric (unitless)\nMeasured_pH (Measured P H, pH scale, NIST)\nMeasured_pH_SD (Measured P H SD, pH scale, NIST)\nMeasured_DO (milligrams per liter (mg L-1))\nMeasured_DO_SD (milligrams per liter (mg L-1))\npCO2 (P CO2, microatmospheres (uatm))\npCO2_SD (P CO2 SD, microatmospheres (uatm))\nAT (micromoles per kilogram (umol kg-1))\nAT_SD (micromoles per kilogram (umol kg-1))\n... (4 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_777144/index.htmlTable https://www.bco-dmo.org/dataset/777144 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_777144.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_777144&showErrors=false&email= BCO-DMO bcodmo_dataset_777144
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_4040 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_4040.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_4040/ public [carbonate chemistry and corals expt] - Results from OA/feeding experiment: carbonate chemistry and coral skeletal weight, symbiont density, and total tissue lipid content of samples collected from northwestern Bermuda patch reefs; 2010 (An Investigation of the Role of Nutrition in the Coral Calcification Response to Ocean Acidification) Results from OA/feeding experiment: carbonate chemistry and coral skeletal weight, symbiont density, and total tissue lipid content of samples collected from northwestern Bermuda patch reefs; 2010\n\ncdm_data_type = Other\nVARIABLES:\ntreatment (text)\nsal (psu)\nsal_sd (psu)\nalk (microequivalent per kilogram (ueq/kg))\nalk_sd (microequivalent per kilogram (ueq/kg))\nDIC (micromoles per kilogram (umol/kg))\nDIC_sd (micromoles per kilogram (umol/kg))\npH (Sea Water Ph Reported On Total Scale, NBS)\npH_sd (P H SD, NBS)\nHCO3 (micromoles per kilogram (umol/kg))\nHCO3_sd (micromoles per kilogram (umol/kg))\nCO3 (micromoles per kilogram (umol/kg))\nCO3_sd (micromoles per kilogram (umol/kg))\nAragSat (Arag Sat, dimensionless)\nAragSat_sd (Arag Sat Sd, dimensionless)\nPcntSpat3oSepta (Pcnt Spat3o Septa, %)\nPcntSpat3oSepta_se (Pcnt Spat3o Septa Se, %)\nSeptaDiam (Septa Diam, micrometers (um))\nSeptaDiam_se (Septa Diam Se, micrometers (um))\nCoralliteWt (Corallite Wt, micrograms (ug))\nCoralliteWt_se (Corallite Wt Se, micrograms (ug))\nTotLipid_per_area (Tot Lipid Per Area, micrograms per square millimeter (ug/mm^2))\nTotLipid_per_area_se (Tot Lipid Per Area Se, micrograms per square millimeter (ug/mm^2))\nSymbiontDensity (Symbiont Density, x1000 cells per square millimeter (x10^3 cells/mm^2))\nSymbiontDensity_se (Symbiont Density Se, x1000 cells per square millimeter (x10^3 cells/mm^2))\n... (5 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_4040/index.htmlTable https://www.bco-dmo.org/dataset/4040 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_4040.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_4040&showErrors=false&email= BCO-DMO bcodmo_dataset_4040
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_754694 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_754694.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_754694/ public [Carpenter 2018: carbonate chemistry] - Carbonate chemistry from outdoor flumes at the UCB Gump Research Station Moorea, French Polynesia from November of 2015 to March of 2016 (RUI: Ocean Acidification- Category 1- The effects of ocean acidification on the organismic biology and community ecology of corals, calcified algae, and coral reefs) This dataset carbonate chemistry data from outdoor flumes at the UCB Gump Research Station Moorea, French Polynesia. These measurements were taken during an experiment designed to measure coral reef community metabolism responses to ocean acidification over a 4-month period from November 13th, 2015 to March 15th, 2016. These data were published in Carpenter et al. (2018).\n\ncdm_data_type = Other\nVARIABLES:\nFlume (unitless)\nTreatment (unitless)\nDate (unitless)\npH_24h (P H 24H, total hydrogen ion scale (pHT))\npH_Day (P H Day, total hydrogen ion scale (pHT))\npH_night (P H Night, total hydrogen ion scale (pHT))\npCO2_24h (P CO2 24h, microatmospheres (μatm))\npCO2_Day (P CO2 Day, microatmospheres (μatm))\npCO2_Night (P CO2 Night, microatmospheres (μatm))\nDIC_24h (micromoles per kilogram (μmol kg-1))\nDIC_Day (micromoles per kilogram (μmol kg-1))\nDIC_Night (micromoles per kilogram (μmol kg-1))\nTA_24h (micromoles per kilogram (μmol kg-1))\nTA_Day (micromoles per kilogram (μmol kg-1))\nTA_Night (micromoles per kilogram (μmol kg-1))\nOmega_24h (omega aragonite (Ωa))\nOmega_Day (omega aragonite (Ωa))\nOmega_Night (omega aragonite (Ωa))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_754694/index.htmlTable https://www.bco-dmo.org/dataset/754694 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_754694.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_754694&showErrors=false&email= BCO-DMO bcodmo_dataset_754694
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_754685 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_754685.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_754685/ public [Carpenter 2018: hourly metabolism] - Coral community hourly metabolism from outdoor flumes at the UCB Gump Research Station Moorea, French Polynesia from November of 2015 to March of 2016 (RUI: Ocean Acidification- Category 1- The effects of ocean acidification on the organismic biology and community ecology of corals, calcified algae, and coral reefs) This dataset contains hourly coral community metabolism data from outdoor flumes at the UCB Gump Research Station Moorea, French Polynesia. These measurements were taken during an experiment designed to measure coral reef community metabolism responses to ocean acidification over a 4-month period from November 13th, 2015 to March 15th, 2016. These data were published in Carpenter et al. (2018).\n\ncdm_data_type = Other\nVARIABLES:\nFlume (unitless)\nTreatment (unitless)\nTime_hrs (hours)\nMean_Gnet (millimoles per meter squared per hour (mmol/m2/h))\nGnet_SE (millimoles per meter squared per hour (mmol/m2/h))\nGnet_N (number per incubation)\nMean_Pnet (millimoles per meter squared per hour (mmol/m2/h))\nPnet_SE (millimoles per meter squared per hour (mmol/m2/h))\nPnet_N (number per incubation)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_754685/index.htmlTable https://www.bco-dmo.org/dataset/754685 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_754685.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_754685&showErrors=false&email= BCO-DMO bcodmo_dataset_754685
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_754676 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_754676.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_754676/ public [Carpenter 2018: metabolism] - Coral community metabolism from outdoor flumes at the UCB Gump Research Station Moorea, French Polynesia from November of 2015 to March of 2016 (RUI: Ocean Acidification- Category 1- The effects of ocean acidification on the organismic biology and community ecology of corals, calcified algae, and coral reefs) This dataset contains coral community metabolism data from outdoor flumes at the UCB Gump Research Station Moorea, French Polynesia. These measurements were taken during an experiment designed to measure coral reef community metabolism responses to ocean acidification over a 4-month period from November 13th, 2015 to March 15th, 2016. These data were published in Carpenter et al. (2018).\n\ncdm_data_type = Other\nVARIABLES:\nTreatment (unitless)\nFlume (unitless)\nDate (unitless)\nTime_of_day (unitless)\nGnet (millimoles per meter squared per hour (mmol/m2/h))\nPnet (millimoles per meter squared per hour (mmol/m2/h))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_754676/index.htmlTable https://www.bco-dmo.org/dataset/754676 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_754676.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_754676&showErrors=false&email= BCO-DMO bcodmo_dataset_754676
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_754644 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_754644.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_754644/ public [Carpenter 2018: physical data] - Temperature and irradiance from outdoor flumes at the UCB Gump Research Station Moorea, French Polynesia from November of 2015 to March of 2016 (RUI: Ocean Acidification- Category 1- The effects of ocean acidification on the organismic biology and community ecology of corals, calcified algae, and coral reefs) Temperature and irradiance from outdoor flumes at the UCB Gump Research Station Moorea, French Polynesia from November of 2015 to March of 2016.\n\ncdm_data_type = Other\nVARIABLES:\nDate (unitless)\nTreatment_days (days)\nTreatment (unitless)\nFlume (unitless)\nTemperature_24h (degrees Celcius (C))\nTemperature_day (degrees Celcius (C))\nTemperature_night (degrees Celcius (C))\nIrrandiance (micromoles per meters squared per second (umol m-2 s-1))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_754644/index.htmlTable https://www.bco-dmo.org/dataset/754644 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_754644.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_754644&showErrors=false&email= BCO-DMO bcodmo_dataset_754644
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_908572_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_908572_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_908572_v1/ public [CDOM] - Chromophoric dissolved organic matter (CDOM) from two microcosm incubation experiments conducted under three light treatments using water originating from West Bay of the Neuse River Estuary, North Carolina USA in 2021 and 2022 (Bacteria as Biosensors of Carbon and Energy Flow in Marine Ecosystems: Quantitative Links Between Substrates, Transcripts, and Metabolism) Chromophoric dissolved organic matter (CDOM) was collected for two microcosm incubation experiments. Sample water originated from West Bay of the Neuse River Estuary, North Carolina USA in 2021 and 2022. The microcosms were 60 liters, conducted in biological duplicates under three light treatment incubations: 12-hour light-dark cycle of photosynthetically active radiation (PAR), 12-hour light-dark cycle of UV-B radiation, or darkness. Samples were collected from the microcosms in duplicate every few days for over one month to examine how light and the resulting microbial activity altered the dissolved organic carbon (DOC) pool over time. Absorbance spectra of 0.2 micron filtered estuarine water was measured from 190 - 1100 nanometers (nm) on a Genesys 10S UV-Vis spectrophotometer for the calculation of absorbance coefficients, spectral slopes, and slope ratio which describe the organic matter complexity as it develops throughout the incubations.\n\ncdm_data_type = Other\nVARIABLES:\nExperiment_Name (unitless)\nStart_date (unitless)\nTreatment (unitless)\nIncubation_day (days)\nTank_ID (unitless)\nnm (nanometers (nm))\nabsp_coef (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_908572_v1/index.htmlTable https://www.bco-dmo.org/dataset/908572 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_908572_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_908572_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_908572_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_894169_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_894169_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_894169_v1/ public [Cerro Mundo Algal Ash-Free Dry Weight] - Macroalgal biomass data (Preburn, Postburn, and Ash-Free Dry Weight) collected in the nearshore shallow subtidal during six field experiments conducted at Cerro Mundo Bay in the Galapagos Islands between July 2021 and May 2022 (The Role of Temperature in Regulating Herbivory and Algal Biomass in Upwelling Systems) Increased standing macroalgal biomass in upwelling zones is generally assumed to be the result of higher nutrient flux due to upwelled waters. However, other factors can strongly impact macroalgal communities. For example, herbivory and temperature, via their effects on primary producers and the metabolic demands of consumers, can also influence macroalgal biomass and productivity, respectively.  Although there are a fair number of studies looking at the interactive effects of herbivores and nutrients in both tropical and temperate regions, there is a lack of studies looking at these effects in tropical or subtropical upwelling regions. The purpose of this study was to measure the effects that herbivores, temperature, and nutrient availability have on standing macroalgal biomass. We manipulated nutrient availability and herbivory in six field experiments during contrasting productivity and thermal regimes (cool-upwelling and warm, non-upwelling season) on a subtidal nearshore rocky reef.\n\nHere, we present the macroalgal biomass raw data (Preburn, Postburn, and Ash-Free Dry Weight) collected in the nearshore shallow subtidal during the six field experiments.\n\ncdm_data_type = Other\nVARIABLES:\nTrial (unitless)\nCage (unitless)\nTreatment (unitless)\nN (unitless)\nAlgae_Type (unitless)\nFoil_cup_weight (grams (g))\nSample_and_foil_cup_weight (grams (g))\nPreburn_weight (grams (g))\nCeramic_cup_weight (grams (g))\nSample_and_ceramic_cup_weight (grams (g))\nPostburn_weight (grams (g))\nAFDW (grams (g))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_894169_v1/index.htmlTable https://www.bco-dmo.org/dataset/894169 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_894169_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_894169_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_894169_v1
log in [Chemotaxis of P. haloplanktis towards exudates of Synechoccocus] - Chemotaxis of P. haloplanktis towards exudates of phage-infected and control Synechoccocus (VIC project) (Collaborative Research: Viral induced chemotaxis mediating cross-trophic microbial interactions and carbon flux) This data set summarises the chemotactic response of a model marine bacteria (Pseudoalteromonas haloplanktis  ATCC 700530) to filtered exudates of the cyanobacteria Synechococcus sp WH8102. Two filtrate sets were collected, each spanning 6 time points (named T1 -> T6), with the initial assays split into 4 biological replicates (named A,B,C,D). \n\nThe two treatments were:\n\n1) A control treatment (named \"Control\", or shortened to \"C\")\n\n2) A phage-infected treatment (named \"Phage\", or shortened to \"P\"), where host Synechococcus were infected with the T-4 like Myovirus S-SSM5, with data collected over the pre-lysis cycle.\n\nThese treatments are fully described in: https://doi.org/10.1038/s43705-022-00169-6.\n\n\nAt both time points, statistically significant preference was measured towards the phage-infected exudates by analyzing the cell distribution across a microfluidic channel.\n\ncdm_data_type = Other\nVARIABLES:\nExperiment_ID (unitless)\nExperiment_type (unitless)\nBioreplicate_ID (unitless)\nTime_point_ID (unitless)\nTreatment (unitless)\nTime_t (minutes)\nbeta_Repeat_1 (unitless)\nbeta_Repeat_2 (unitless)\nbeta_Repeat_3 (unitless)\nAverage (unitless)\nStandard_Error (unitless)\n BCO-DMO bcodmo_dataset_913620_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_948396_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_948396_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_948396_v1/ public [CliOMZ Dark DIC fixation rates] - Dark DIC Fixation Rates collected from CliOMZ AT50-10 in the Eastern Pacific Ocean from May to June 2023 (CliOMZ project) (Collaborative Research: Underexplored Connections between Nitrogen and Trace Metal Cycling in Oxygen Minimum Zones Mediated by Metalloenzyme Inventories) These data include dark dissolved inorganic carbon (DIC) fixation rates measured on R/V Atlantis (CliOMZ AT50-10 expedition) from Golfito, Costa Rica to San Diego, USA in May-June 2023.  We aimed at quantifying dark DIC fixation rates associated with nitrification by specifically inhibiting ammonia-oxidizing microorganisms. Instruments used were a CTD profiler and a scintillation counter (Perkin-Elmer Tri-Carb 2910 TR).\n\ncdm_data_type = Other\nVARIABLES:\nCruise (unitless)\nDate (unitless)\nlongitude (Latitude, degrees_east)\nlatitude (Longitude, degrees_north)\nStation (unitless)\ndepth (m)\nTreatment (unitless)\nDIC_fixation (nanomoles per liter per day (nmol/L/d))\nIncubation_time (hours (h))\nDIC_conc (micromoles per liter (umol/L))\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_948396_v1_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_948396_v1_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_948396_v1/index.htmlTable https://www.bco-dmo.org/dataset/948396 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_948396_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_948396_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_948396_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_948411_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_948411_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_948411_v1/ public [CliOMZ Heterotrophic production rates] - Heterotrophic Production Rates collected from CliOMZ AT50-10 in the Eastern Pacific Ocean from May to June 2023 (CliOMZ project) (Collaborative Research: Underexplored Connections between Nitrogen and Trace Metal Cycling in Oxygen Minimum Zones Mediated by Metalloenzyme Inventories) These data include heterotrophic production rates measured on R/V Atlantis (CliOMZ AT50-10 expedition) from Golfito, Costa Rica to San Diego, USA in May-June 2023.  We aimed at comparing heterotrophic and chemoautotrophic microbial activities at the selected study sites. Instruments used were a CTD profiler and a scintillation counter (Perkin-Elmer Tri-Carb 2910 TR).\n\ncdm_data_type = Other\nVARIABLES:\nCruise (unitless)\nDate (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nStation (unitless)\nCast (unitless)\ndepth (m)\nHet_production (nanomoles carbon per liter per day (nmol C/L/d))\nTreatment (unitless)\nIncubation_time (hours (h))\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_948411_v1_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_948411_v1_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_948411_v1/index.htmlTable https://www.bco-dmo.org/dataset/948411 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_948411_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_948411_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_948411_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_928039_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_928039_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_928039_v1/ public [Controlled laboratory study using model organisms Micromonas commoda RCC 299 and Ruegeria pomeroyi DSS-3] - Bacterial transcriptional response to picoeukaryote Micromonas commoda (Effects of Climate Change Variables on Microbial Autotroph-Heterotroph Carbon Flux) Marine biogeochemical cycles are built on interactions between surface ocean microbes, particularly those connecting phytoplankton primary producers to heterotrophic bacteria. However, direct influences of bacteria on phytoplankton physiology are poorly known. In this study, three marine bacteria (Ruegeria pomeroyi DSS-3, Stenotrophomonas sp. SKA14, and Polaribacter dokdonensis MED152) were co-cultured with green alga Micromonas commoda, and the phytoplankter's transcriptome was studied by RNASeq. The presence of each bacterium invoked transcriptomic remodeling by M. commoda after 8 h in co-culture. Some aspects of the algal transcriptomic response were conserved across all three bacteria, while others were restricted to a single bacterium. M. commoda had both rapid and extensive responses to heterotrophic bacteria.\n\ncdm_data_type = Other\nVARIABLES:\nBottle_ID (unitless)\nTreatment (unitless)\nTime_h (hour (h))\nMicromonas_cells_ml (cells per milliliter (cell/ml))\nBacteria_cells_ml (cells per milliliter (cell/ml))\nNH4_uM (micromolar (uM))\nNO3_uM (micromolar (uM))\nPO4_uM (micromolar (uM))\nNCBI_Sample_ID (unitless)\nAccession (unitless)\nBioProject (unitless)\nOrganism (unitless)\nTaxonomy_ID (unitless)\nDescription (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_928039_v1/index.htmlTable https://www.bco-dmo.org/dataset/928039 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_928039_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_928039_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_928039_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_872486_v2 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_872486_v2.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_872486_v2/ public [Coral clipping experiment - branching] - Branching data from a clipping experiment conducted on the coral Antillogorgia elisabethae at two sites in the Bahamas determined from June 1999 to June 2000 (Collaborative Research: Pattern and process in the abundance and recruitment of Caribbean octocorals) This dataset results from an experiment in which colonies of the coral Antillogorgia elisabethae were clipped to simulate harvesting/disturbance at 2 sites in the Bahamas, one at Great Abaco and another at San Salvador Island. This dataset includes per capita branching ratio, number of new branches, and number of new branches per mother branch for colonies that were clipped to 10 or 4 branches or not clipped. Version 2 of this dataset, created on 2023-11-07, includes a correction to the latitude of the Abaco site.\n\ncdm_data_type = Other\nVARIABLES:\nLocation (unitless)\nLatitude (degrees_north)\nlongitude (degrees_east)\nTreatment (unitless)\nSiteTreat (unitless)\nColony (unitless)\nNewBranches (unitless)\nOldBranches (unitless)\nPerCapitaRatio (unitless)\nNumberofMotherBranches (unitless)\nMotherBranch (unitless)\nNewDaughterBranches (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_872486_v2/index.htmlTable https://www.bco-dmo.org/dataset/872486 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_872486_v2.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_872486_v2&showErrors=false&email= BCO-DMO bcodmo_dataset_872486_v2
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_872600_v2 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_872600_v2.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_872600_v2/ public [Coral clipping experiment - growth] - Branch extension measurements from a clipping experiment conducted on the coral Antillogorgia elisabethae at two sites in the Bahamas determined from June 1999 to June 2000 (Collaborative Research: Pattern and process in the abundance and recruitment of Caribbean octocorals) This dataset results from an experiment in which colonies of the coral Antillogorgia elisabethae were clipped to simulate harvesting/disturbance at 2 sites in the Bahamas, one at Great Abaco and another at San Salvador Island. This dataset includes branch extension measurements for colonies that were clipped to 10 or 4 branches or not clipped. Version 2 of this dataset, created on 2023-11-07, includes a correction to the latitude of the Abaco site.\n\ncdm_data_type = Other\nVARIABLES:\nLocation (unitless)\nLatitude (degrees_north)\nlongitude (degrees_east)\nColony (unitless)\nTreatment (unitless)\nSiteTreat (unitless)\nBranch_Number (unitless)\nGrowth_cm (centimeters (cm))\nJun_99 (centimeters (cm))\nJul_00 (centimeters (cm))\nBranchType (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_872600_v2/index.htmlTable https://www.bco-dmo.org/dataset/872600 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_872600_v2.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_872600_v2&showErrors=false&email= BCO-DMO bcodmo_dataset_872600_v2
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_489382 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_489382.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_489382/ public [coral growth dye experiment] - Results from experiment examining effects of 4 different dyes on growth rates of scleractinian corals; from the Cohen lab at WHOI in Woods Hole, MA (OA Nutrition and Coral Calcification project) (An Investigation of the Role of Nutrition in the Coral Calcification Response to Ocean Acidification) Results from experiment examining effects of 4 different dyes on growth rates of scleractinian corals; from the Cohen lab at WHOI in Woods Hole, MA.\n\ncdm_data_type = Other\nVARIABLES:\ntreatment (dimensionless)\ntreatment_abbrev (dimensionless)\nrel_growth_during_treatment (dimensionless)\nrel_growth_post_treatment (dimensionless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_489382/index.htmlTable https://www.bco-dmo.org/dataset/489382 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_489382.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_489382&showErrors=false&email= BCO-DMO bcodmo_dataset_489382
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_489449 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_489449.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_489449/ public [coral growth isotope spike experiment] - Results from experiment examining effects of 2 different isotope spikes on growth rates of scleractinian corals; from the Cohen lab at WHOI in Woods Hole, MA (OA Nutrition and Coral Calcification project) (An Investigation of the Role of Nutrition in the Coral Calcification Response to Ocean Acidification) Results from experiment examining effects of 2 different isotope spikes on growth rates of scleractinian corals; from the Cohen lab at WHOI in Woods Hole, MA.\n\ncdm_data_type = Other\nVARIABLES:\ntreatment (dimensionless)\ngrowth_rate_pre (dimensionless)\ngrowth_rate_post (dimensionless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_489449/index.htmlTable https://www.bco-dmo.org/dataset/489449 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_489449.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_489449&showErrors=false&email= BCO-DMO bcodmo_dataset_489449
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_933832_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_933832_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_933832_v1/ public [Coral lesion frequencies and sizes after fish feces treatment] - Lesion frequencies and sizes after fish feces treatment on coral samples collected on the north shore of Mo’orea, French Polynesia, Oct 2020 to Jun 2021 (CAREER: Testing the effects of predator-derived feces on host symbiont acquisition and health) This datafile contains frequencies and sizes (number of polyps killed) developed in coral tissues after the application and removal of fish feces to test whether fish from different guilds affect coral health in distinct ways.There were five treatments: fresh feces from a corallivorous butterflyfish (FC); fresh feces from a grazer/detritivore (FG); sterilized feces from a corallivorous butterflyfish (SC); sterilized feces from a grazer/detritivore (SG); no-feces control (C). For the fresh feces treatments (FC, FG), we applied 100 µl of fresh feces isolated from the hindgut of the butterflyfish Chaetodon ornatissimus (FC) or the grazer/detritivore Ctenochaetus striatus (FG) directly onto each coral fragment. For the sterilized feces treatments (SC, SG), fecal pellets were sterilized in a pressure cooker for 40 minutes at 120°C and then applied in the same manner as fresh feces. The experiment ran for ~22 hours. The experiment was conducted in three iterations in Mo'orea, French Polynesia, over two years (2020, 2021).\n\ncdm_data_type = Other\nVARIABLES:\nSample_ID (unitless)\nCollection_Date (unitless)\nExperiment (unitless)\nTreatment (unitless)\nColony (unitless)\nReplicate (unitless)\nHealth (unitless)\nDead_Polyps (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_933832_v1/index.htmlTable https://www.bco-dmo.org/dataset/933832 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_933832_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_933832_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_933832_v1
log in [Coral physiological measurements] - Montipora capitata and Porites compressa Physiological Measurements for Experimental Corals and Parent Colonies from 2014-2015 (RAPID Hawaii project) (Will corals recover from bleaching under ocean acidification conditions?) Physiological data for Montipora capitata and Porites compressa: endosymbiont cell density (cells cm-2), Contribution of Total Carbon to Animal Respiration (CTAR, %), calcification (mg day-1 cm-2), biomass (g cm-2), total lipids (J gdw-1), photosynthesis and respiration (µmol hr-1 cm-2), Contribution of Zooxanthellae (Symbiodiniaceae) to Animal Respiration (CZAR, %), feeding rate (brine shrimp hr-1 cm-2), and Contribution of Heterotrophy to Animal Respiration (CHAR, %). Measurements for experimental corals were taken from one of three time points (November 2015, June 2014, or December 2015).\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\nCollection_site (unitless)\nlatitude (Latitude_decimal_degrees, degrees_north)\nlongitude (Longitude_decimal_degrees, degrees_east)\nLat (degrees_north)\nLong (degrees_east)\nColony (unitless)\nSample_ID (unitless)\nHealth_status (unitless)\npH (unitless)\nFeeding_status (unitless)\nTreatment (unitless)\nTank (unitless)\nTime_point (unitless)\nEndo_density (cells cm-2)\nCalc (mg day-1 cm-2)\nTotal_biomass (g cm-2)\nTotal_lipids (J gdw-1)\nGross_P (umol O2 min-1 cm-2)\nLEDR (unitless)\nCZAR (unitless)\nFR (Brine shrimp hr-1 cm-2)\nCHAR (unitless)\nCTAR (unitless)\n BCO-DMO bcodmo_dataset_914498_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_742565 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_742565.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_742565/ public [Coral settlement] - Porites astreoides coral settlement counts collected in July of 2017 from an in situ larval coral settlement experiment in St. John, US Virgin Islands (Coral Chorus: The Role of Soundscapes in Coral Reef Larval Recruitment and Biodiversity) Brooding coral Porites astreoides colonies were collected on St. John, U.S. Virgin Islands on June 22nd, 2017 and used in an in-situ larval coral settlement experiment. Settlement counts were taken on June 28th, 2017.\n\ncdm_data_type = Other\nVARIABLES:\nSample_ID (unitless)\nSite (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nCup_ID (unitless)\nTreatment (unitless)\nDate_examined (unitless)\nTime_examined (unitless)\nLarvae_settled_clay (per individual)\nLarvae_settled_red_ziptie (per individual)\nLarvae_settled_cup (per individual)\nSwimming_in_water (per individual)\nUnsettled_on_clay (per individual)\nNotes (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_742565_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_742565/index.htmlTable https://www.bco-dmo.org/dataset/742565 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_742565.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_742565&showErrors=false&email= BCO-DMO bcodmo_dataset_742565
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_652849 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_652849.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_652849/ public [Coral-bacterioplankton data from mesocosm experiments] - Bacterioplankton data from coral and coral mucus aquaria experiments conducted at Bermuda Institute of Ocean Sciences in 2013 (Fundamental Coral-Microbial Associations) Bacterioplankton data from coral and coral mucus aquaria experiments conducted at Bermuda Institute of Ocean Sciences in 2013\n\ncdm_data_type = Other\nVARIABLES:\ntreatment (unitless)\ntreatment_description (unitless)\ntank (unitless)\nmesocosm (unitless)\ntimepoint_name (days)\ntimepoint_days (days)\ntemp (Temperature, celsius)\nsalinity (Sea Water Practical Salinity, ppt)\nDAPI_count (cells per milliliter)\naccession_number (unitless)\nnonPigmentPico (Non Pigment Pico, cells per milliliter)\nsynechococcus (cells per milliliter)\npicoeukaryote (cells per milliliter)\nlowHeterotrophicBac (Low Heterotrophic Bac, cells per milliliter)\nhighHeterotrophicBac (High Heterotrophic Bac, cells per milliliter)\nSAR11 (cells per milliliter)\nrhodobacteracea (cells per milliliter)\nalteromonas (cells per milliliter)\nvibrio (cells per milliliter)\nthaumarchaeota (cells per milliliter)\neuryarchaeota (cells per milliliter)\nP04 (micromoles)\nN03_N02 (micromoles)\nSi04 (micromoles)\nN02 (micromoles)\nNH4 (Mole Concentration Of Ammonium In Sea Water, micromoles)\n... (9 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_652849/index.htmlTable https://www.bco-dmo.org/dataset/652849 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_652849.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_652849&showErrors=false&email= BCO-DMO bcodmo_dataset_652849
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_777273.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_777273 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_777273.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_777273/ public [Coralliophila_GrowthMorphology] - Coral growth and morphology based on snail presence from experiments in Moorea, French Polynesia from May, 2013 through May, 2014 (Spatial patterns of coral-vermetid interactions: short-term effects and long-term consequences) 12 corals were selected with Coralliophila violacea.  A random snail was selected, and a similar location identified on the coral for comparison.  At each location, a 20cm by 20cm plexiglass plate was placed against the coral, and 20 randomly selected depth measurements taken.  The variance of those measurements is reported.  A nail was then hammered into the coral at each location, and the length recorded.   After 1 year, the corals were revisited, and the measurements repeated to calculate change in nail length (coral linear extension) and change in morphology (change in variance of depth measurements).\n\ncdm_data_type = Other\nVARIABLES:\nCoral (unitless)\nTreatment (unitless)\nVariance (square centimeters (cm2))\nGrowth (centimeters (cm))\nlongitude (degrees_east)\nlatitude (degrees_north)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_777273_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_777273/index.htmlTable https://www.bco-dmo.org/dataset/777273 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_777273.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_777273&showErrors=false&email= BCO-DMO bcodmo_dataset_777273
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3992 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3992.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3992/ public [damselfish response to lionfish] - Observations of damselfish (Stegastes planifrons) behavior in the presence of lionfish and other native fishes at Lee Stocking Island, Bahamas and Little Cayman Island in 2011 (Lionfish Invasion project) (Ecological Release and Resistance at Sea: Invasion of Atlantic Coral Reefs by Pacific Lionfish) A field study was conducted to determine whether territorial aggression from three-spot damselfish (Stegastes planifrons) could limit local populations of invasive lionfish. The investigators observed damselfish behavior in the presence of lionfish relative to when other native fishes were present.\n\ncdm_data_type = Other\nVARIABLES:\ntreatment (text)\nsite (text)\nlatitude (degrees_north)\nlongitude (degrees_east)\nlocation (text)\ndamselfish_tot_len (cm)\nnum_attacks_1m (integer)\nnum_attacks_half_m (integer)\nnum_attacks_0m (integer)\nmax_attack_dist (meters)\ndepth_ft (Depth, feet)\nhabitat (text)\ndate (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_3992_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3992/index.htmlTable https://www.bco-dmo.org/dataset/3992 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3992.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3992&showErrors=false&email= BCO-DMO bcodmo_dataset_3992
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_666201 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_666201.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_666201/ public [Diatom growth rates] - Diatom growth rates from samples collected on the Gould cruise LMG1411 in the Western Antarctica Peninsula from 2014 (Polar Transcriptomes project) (Iron and Light Limitation in Ecologically Important Polar Diatoms: Comparative Transcriptomics and Development of Molecular Indicators) Diatom growth rates from samples collected on the Gould cruise LMG1411 in the Western Antarctica Peninsula from 2014 (Polar Transcriptomes project)\n\ncdm_data_type = Other\nVARIABLES:\nspecies (unitless)\ntreatment (unitless)\nmean_specific_u (d -1)\nrelative_u (unitless)\nstd_error_u (unitless)\npropogation_error_u (unitless)\nsample_size_u (unitless)\nmean_FvFm (Mean Fv Fm, unitless)\nrelative_FvFm (Relative Fv Fm, unitless)\nstd_error_FvFm (Std Error Fv Fm, unitless)\npropogation_error_FvFm (Propogation Error Fv Fm, unitless)\nsample_size_FvFm (Sample Size Fv Fm, unitless)\nmean_sigma (A2 quanta -1)\nrelative_sigma (unitless)\nstd_error_sigma (unitless)\npropogation_error_sigma (unitless)\nsample_size_sigma (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_666201/index.htmlTable https://www.bco-dmo.org/dataset/666201 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_666201.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_666201&showErrors=false&email= BCO-DMO bcodmo_dataset_666201
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_944277_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_944277_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_944277_v1/ public [Dissolved Inorganic Nutrients] - Dissolved inorganic nutrients from two microcosm incubation experiments conducted on sample water collected from West Bay of the Neuse River Estuary, North Carolina USA in 2021 and 2022 (Bacteria as Biosensors of Carbon and Energy Flow in Marine Ecosystems: Quantitative Links Between Substrates, Transcripts, and Metabolism) Dissolved inorganic nutrients were collected for two microcosm incubation experiments. Sample water originated from West Bay of the Neuse River Estuary, North Carolina USA in 2021 and 2022. The microcosms were 60 liters, conducted in biological duplicates under three light treatment incubations: 12-hour light-dark cycle of photosynthetically active radiation (PAR), 12-hour light-dark cycle of UV-B radiation, or darkness. Samples were collected from the microcosms in duplicate every few days for over one month to examine how light and the resulting microbial activity altered the concentrations of dissolved inorganic nutrients (total dissolved nitrate and nitrite or NOx, ammonium or NH4, and soluble reactive phosphorus or SRP) over time. Concentrations of these inorganic nutrients were quantified via colorimetric assays on a Genesys 10S UV-Vis spectrophotometer or Tecan Infinite 200Pro plate reader.\n\ncdm_data_type = Other\nVARIABLES:\nExperiment (unitless)\nDate_Start (unitless)\nIncubation_Day (days)\nTreatment (unitless)\nTank_ID (unitless)\nReplicate (unitless)\nNOx (micromolar (uM))\nNH4 (micromolar (uM))\nSRP (micromolar (uM))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_944277_v1/index.htmlTable https://www.bco-dmo.org/dataset/944277 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_944277_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_944277_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_944277_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_908475_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_908475_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_908475_v1/ public [Dissolved Organic Carbon] - Bulk dissolved organic carbon (DOC) from two microcosm incubation experiments conducted under three light treatments using water originating from West Bay of the Neuse River Estuary, North Carolina USA in 2021 and 2022 (Bacteria as Biosensors of Carbon and Energy Flow in Marine Ecosystems: Quantitative Links Between Substrates, Transcripts, and Metabolism) Bulk dissolved organic carbon (DOC) was collected from two microcosm incubation experiments. Sample water originated from West Bay of the Neuse River Estuary, North Carolina USA in 2021 and 2022. The microcosms were 60 liters, conducted in biological duplicates under three light treatment incubations: 12-hour light-dark cycle of photosynthetically active radiation (PAR), 12-hour light-dark cycle of UV-B radiation, or darkness. Samples were collected from the microcosms in duplicate every few days for over one month to examine how light and the resulting microbial activity altered the DOC pool over time.\n\ncdm_data_type = Other\nVARIABLES:\nExperiment_Name (unitless)\nStart_date (unitless)\nTreatment (unitless)\nIncubation_day (days)\nTank_ID (unitless)\nDOC_uM (micromoles per liter (umol L-1))\nDOC_Technical_sd (micromoles per liter (umol L-1))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_908475_v1/index.htmlTable https://www.bco-dmo.org/dataset/908475 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_908475_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_908475_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_908475_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_808402.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_808402 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_808402.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_808402/ public [Domoic acid assimilation in copepods] - Domoic acid assimilation in copepods from experiments conducted using water samples collected in northern Gulf of Mexico in 2019 (The biotic and abiotic controls on the Silicon cycle in the northern Gulf of Mexico) Domoic acid assimilation in copepods by consuming organic polymers containing domoic acid.  Results from lab experiments designed to investigate the role of organic polymers in trophic transfer of domoic acid, using Acartia tonsa as a model organism.  Water samples were collected in the northern Gulf of Mexico in 2019.\n\ncdm_data_type = Other\nVARIABLES:\ntime (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)\nlatitude (degrees_north)\nlongitude (degrees_east)\nDate (unitless)\ntime2 (Time, unitless)\nExperiment (unitless)\nTreatment (unitless)\nReplicate_bottle (unitless)\nNum_copepods (integer)\ncDA_mass (C DA Mass, nanograms (ng))\ncDA_indiv (C DA Indiv, picograms (pg) per copepod)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_808402_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_808402/index.htmlTable https://www.bco-dmo.org/dataset/808402 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_808402.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_808402&showErrors=false&email= BCO-DMO bcodmo_dataset_808402
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_883999_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_883999_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_883999_v1/ public [Dose response evaluation of oyster shell strengthening in response to homarine and trigonelline] - Juvenile oyster shell strength measurements from a dose response assay of chemical cues homarine and trigonelline conducted at Dauphin Island Sea Lab, Dauphin Island, AL in June - August 2021 (Collaborative Research: Keystone chemicals: Identifying general and universal molecules of fear) These data include measurements of juvenile oyster shell strength from a dose response experiment conducted at Dauphin Island Sea Lab, Dauphin Island, AL in June - August of 2021.\nStudy description:\n\nHomarine and trigonelline are two blue crab urine metabolites that cause juvenile oysters to strengthen their shells are a defensive response. We evaluated the dose dependency of this response with a dose-response experiment where homarine and trigonelline concentrations (of each individual chemical and a combination of the two) spanned 5 log half-steps. Juvenile oysters were exposed to chemicals for 8 weeks and their shell strength (N) was measured and standardized to the size of the animals (mm) as a proxy for understanding this defense.\n\ncdm_data_type = Other\nVARIABLES:\nID (unitless)\nBlock (unitless)\nTreatment (unitless)\nReplicate (unitless)\nPair (unitless)\nTile (unitless)\nIndividual (unitless)\nsize (millimeters (mm))\ncrushing_force (newtons (N))\nstand_crushing_force (newtons per millimeter (N/mm))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_883999_v1/index.htmlTable https://www.bco-dmo.org/dataset/883999 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_883999_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_883999_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_883999_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_884015_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_884015_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_884015_v1/ public [Dose response evaluation of oyster shell strengthening to varying blue crab urine concentrations] - Juvenile oyster shell strength measurements from a dose response experiment with an array of blue crab urine concentrations conducted at Dauphin Island Sea Lab, Dauphin Island, AL in August - Oct 2022 (Collaborative Research: Keystone chemicals: Identifying general and universal molecules of fear) These data include measurements of juvenile oyster shell strength from a dose response experiment of varying blue crab urine concentrations conducted at Dauphin Island Sea Lab, Dauphin Island, AL in August - Oct 2022.\nStudy description:\n\nMetabolites from blue crab urine are known to cause shell strengthening in juvenile oysters as a defensive response. Previous studies have identified several bioactive molecules in urine that induce this response in oysters, but others have yet to be identified. In the current study, an array of concentrations of blue crab urine was used to treat oyster juveniles in order to assess the dose-dependency of this response. Oysters were exposed to urine treatments for 8 weeks and their shell strength (N) was measured and standardized to the size of the animals (mm) as a proxy for understanding this defense.\n\ncdm_data_type = Other\nVARIABLES:\nID (unitless)\nDiet (unitless)\nTreatment (unitless)\nDose (unitless)\nReplicate (unitless)\nPair (unitless)\nTile (unitless)\nIndividual (unitless)\nsize (millimeters (mm))\ncrushing_force_N (newtons (N))\nstand_crushing_force (newtons per millimeter (N/mm))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_884015_v1/index.htmlTable https://www.bco-dmo.org/dataset/884015 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_884015_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_884015_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_884015_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_655342.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_655342 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_655342.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_655342/ public [Effect of lionfish in main seagrass habitats] - Effect of lionfish presence on native fish abundance in main reefs where lionfish resided on Eleuthera, Bahamas during 2013 (Biodiversity Loss Effects Lionfish project) (Mechanisms and Consequences of Fish Biodiversity Loss on Atlantic Coral Reefs Caused by Invasive Pacific Lionfish) Effect of lionfish presence on native fish abundance in main reefs where lionfish resided on Eleuthera, Bahamas during 2013 (Biodiversity Loss Effects Lionfish project)\n\ncdm_data_type = Other\nVARIABLES:\nyear (unitless)\nmonth (unitless)\nvisit_number (unitless)\nday (unitless)\ntreatment (unitless)\nreef (unitless)\nstart (unitless)\nend (unitless)\nspecies (unitless)\nlength_max_1 (count)\nlength_max_2 (count)\nlength_max_3 (count)\nlength_max_4 (count)\nlength_max_5 (count)\nlength_max_6 (count)\nlength_max_7 (count)\nlength_max_8 (count)\nlength_max_9 (count)\nlength_max_10 (count)\nlength_max_15 (count)\nlength_max_20 (count)\nlength_max_25 (count)\nlength_max_30 (count)\nlength_max_35 (count)\nlength_max_40 (count)\nlength_max_45 (count)\neel_shark_count (count)\nnotes (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_655342/index.htmlTable https://www.bco-dmo.org/dataset/655342 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_655342.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_655342&showErrors=false&email= BCO-DMO bcodmo_dataset_655342
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_655420.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_655420 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_655420.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_655420/ public [Effect of lionfish in seagrass open area habitats] - Effect of lionfish presence on native fish abundance in open areas of seagrass habitat in Eleuthera, Bahamas during 2013 (Biodiversity Loss Effects Lionfish project) (Mechanisms and Consequences of Fish Biodiversity Loss on Atlantic Coral Reefs Caused by Invasive Pacific Lionfish) Effect of lionfish presence on native fish abundance in open areas of seagrass habitat in Eleuthera, Bahamas during 2013 (Biodiversity Loss Effects Lionfish project)\n\ncdm_data_type = Other\nVARIABLES:\nyear (unitless)\nmonth (unitless)\nvisit_number (unitless)\nday (unitless)\nreef (unitless)\ntreatment (unitless)\ntime_start (unitless)\ntime_end (unitless)\ntransect_number (unitless)\ntransect_direction (degrees)\ntransect_distance (meters)\nhabitat (unitless)\npresent (unitless)\nspecies (unitless)\nlength_max_1 (count)\nlength_max_2 (count)\nlength_max_3 (count)\nlength_max_4 (count)\nlength_max_5 (count)\nlength_max_6 (count)\nlength_max_7 (count)\nlength_max_8 (count)\nlength_max_9 (count)\nlength_max_10 (count)\nlength_max_15 (count)\nnotes (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_655420/index.htmlTable https://www.bco-dmo.org/dataset/655420 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_655420.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_655420&showErrors=false&email= BCO-DMO bcodmo_dataset_655420
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_655380.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_655380 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_655380.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_655380/ public [Effect of lionfish in seagrass satellite coral head habitats] - Effect of lionfish presence on native fish abundance on satellite coral heads in seagrass habitats on Eleuthera, Bahamas during 2013 (Biodiversity Loss Effects Lionfish project) (Mechanisms and Consequences of Fish Biodiversity Loss on Atlantic Coral Reefs Caused by Invasive Pacific Lionfish) Effect of lionfish presence on native fish abundance on satellite coral heads in seagrass habitats on Eleuthera, Bahamas during 2013 (Biodiversity Loss Effects Lionfish project)\n\ncdm_data_type = Other\nVARIABLES:\nyear (unitless)\nmonth (unitless)\nvisit_number (unitless)\nday (unitless)\ntreatment (unitless)\nreef (unitless)\nstart (unitless)\nend (unitless)\nsatellite_number (unitless)\nsatellite_distance (meters)\nsatellite_size (meters squared)\nspecies (unitless)\nlength_max_1 (count)\nlength_max_2 (count)\nlength_max_3 (count)\nlength_max_4 (count)\nlength_max_5 (count)\nlength_max_6 (count)\nlength_max_7 (count)\nlength_max_8 (count)\nlength_max_9 (count)\nlength_max_10 (count)\nlength_max_15 (count)\nlength_max_20 (count)\nlength_max_25 (count)\nlength_max_30 (count)\n... (5 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_655380/index.htmlTable https://www.bco-dmo.org/dataset/655380 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_655380.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_655380&showErrors=false&email= BCO-DMO bcodmo_dataset_655380
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_655455.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_655455 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_655455.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_655455/ public [Effect of lionfish in standardized habitat units in seagrass] - Effect of lionfish presence on native fish abundance in standardized habitat units in seagrass in Eleuthera, Bahamas during 2013 (Biodiversity Loss Effects Lionfish project) (Mechanisms and Consequences of Fish Biodiversity Loss on Atlantic Coral Reefs Caused by Invasive Pacific Lionfish) Effect of lionfish presence on native fish abundance in standardized habitat units in seagrass in Eleuthera, Bahamas during 2013 (Biodiversity Loss Effects Lionfish project)\n\ncdm_data_type = Other\nVARIABLES:\nyear (unitless)\nsurvey_type (unitless)\nmonth (unitless)\nvisit_number (unitless)\nday (unitless)\ntreatment (unitless)\nreef (unitless)\ntime_start (unitless)\ntime_end (unitless)\nshu_row (unitless)\ndistance (meters)\npresence (unitless)\nspecies (unitless)\nlength_max_1 (count)\nlength_max_2 (count)\nlength_max_3 (count)\nlength_max_4 (count)\nlength_max_5 (count)\nlength_max_6 (count)\nlength_max_7 (count)\nlength_max_8 (count)\nlength_max_9 (count)\nlength_max_10 (count)\nlength_max_15 (count)\nnotes (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_655455/index.htmlTable https://www.bco-dmo.org/dataset/655455 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_655455.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_655455&showErrors=false&email= BCO-DMO bcodmo_dataset_655455
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_918546_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_918546_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_918546_v1/ public [Effect of phenotypic variation on dogwhelk morphology during eco-evolutionary field experiment] - Effect of phenotypic variation on dogwhelk morphology during an eco-evolutionary field experiment (Coastal mosaics of local adaptation and the eco-evolutionary dynamics of a marine predator-prey interaction) Although there is a growing body of work indicating that ecological and evolutionary processes can have reciprocal feedbacks on one another, few studies have tested these feedbacks in natural field settings at the community level. We tested the ecological consequences of selection on intra-population variation in dogwhelk drilling. We reared juvenile dogwhelks (Nucella canaliculata) on four early-life diet treatments (thin-shelled Mytilus trossulus, two treatments of M. californianus from two populations known to differ in adult shell thickness, and acorn barnacles) and then outplanted the dogwhelks to field cages to quantify the community effects of variation in drilling phenotype on mussel bed succession over a year. Changes in Nucella canaliculata morphology (change in length) were determined over the course of the experiment.\n\ncdm_data_type = Other\nVARIABLES:\nBlock (unitless)\nPlot_Number (unitless)\nPlot_Tidal_Height (meters (m))\nFamily (unitless)\nSite_Latitude (degrees_north)\nlongitude (Site_longitude, degrees_east)\nTreatment (unitless)\nFamily_x_Treatment (unitless)\nSnail_ID (unitless)\nSnail_Tag (unitless)\nSex (unitless)\nLength_initial (millimeters (mm))\nLength_final (millimeters (mm))\nLength_change (millimeters (mm))\nDead_vs_Replaced_vs_Never_found (unitless)\nDate_dead_or_replaced (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_918546_v1/index.htmlTable https://www.bco-dmo.org/dataset/918546 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_918546_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_918546_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_918546_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_918401_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_918401_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_918401_v1/ public [Effects of early-life diet on mortality of juvenile Nucella canaliculata] - Effects of early-life diet on mortality of juvenile Nucella canaliculata quantified in the laboratory after 3 months on experimental diets (Coastal mosaics of local adaptation and the eco-evolutionary dynamics of a marine predator-prey interaction) The field of eco-evolutionary dynamics analyzes the reciprocal impacts that ecological and evolutionary processes have on one another on contemporary timescales. A promising approach for studying eco-evolutionary dynamics is to explore whether variation acting over rapid timescales can impose selection on existing within population-variation in functional traits. The Bodega Marine Reserve population of the Channeled Dogwhelk, Nucella canaliculata, contains a mix of drilling phenotypes. A selection experiment was performed to determine the effects of four early-life diet treatments (thin-shelled Mytilus trossulus mussels, two treatments of M. californianus from two populations known to differ in shell thickness, and acorn barnacles) on N. canaliculata phenotype. Dogwhelks were hatched in the laboratory and mortality of juvenile dogwhelks was quantified in the laboratory after 3 months on the experimental diets.\n\ncdm_data_type = Other\nVARIABLES:\nFamily (unitless)\nPopulation (unitless)\nSite_Latitude (degrees_north)\nlongitude (Site_longitude, degrees_east)\nTreatment (unitless)\nThree_Month_Mortality (percent (%))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_918401_v1/index.htmlTable https://www.bco-dmo.org/dataset/918401 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_918401_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_918401_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_918401_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_918460_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_918460_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_918460_v1/ public [Effects of early-life diet on Nucella canaliculata drilling phenotype] - Effects of early-life diet on Nucella canaliculata drilling phenotype quantified in the laboratory after rearing on different prey treatments (Coastal mosaics of local adaptation and the eco-evolutionary dynamics of a marine predator-prey interaction) The growing field of eco-evolutionary dynamics has highlighted the importance of reciprocal feedbacks between evolutionary and ecological processes. We tested whether selection could act on existing within-population variation in a predatory trait in the marine dogwhelk, Nucella canaliculata. We reared newly hatched dogwhelks on four prey treatments (thin-shelled Mytilus trossulus, two treatments of M. californianus from two populations known to differ in adult shell thickness, and acorn barnacles). To quantify dogwhelk phenotype, we tested the surviving adult dogwhelks on their ability to drill mid-sized (5-7cm long) M. californianus. We found evidence that dogwhelk phenotype varied among the early-life diet treatments.\n\ncdm_data_type = Other\nVARIABLES:\nContainer (unitless)\nRound (unitless)\nPopulation (unitless)\nSite_Latitude (degrees_north)\nlongitude (Site_longitude, degrees_east)\nFamily (unitless)\nTreatment (unitless)\nFamily_x_Treatment (unitless)\nSnail (unitless)\nDrilled_Binary (unitless)\nTotal_Drilled (unitless)\nCheck_1 (unitless)\nCheck_2 (unitless)\nCheck_3 (unitless)\nCheck_4 (unitless)\nCheck_5 (unitless)\nDead (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_918460_v1/index.htmlTable https://www.bco-dmo.org/dataset/918460 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_918460_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_918460_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_918460_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_880924_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_880924_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_880924_v1/ public [Effects of protists on HBx predation] - Population changes in Halobacteriovorax cultured with protist & prey (Excellence in Research: Assessing the Control by Multiple Micropredators on Bacterial Communities in Estuarine Environments and Characterization of Prey Lysis Products Resulting from Each Predator) Here, we investigate the growth trajectory and predation dynamics of protists, and HBx micro-predators in co-culture with a common prey, V. parahaemolyticus, in a time-series study in marine water microcosms. The microcosms were established with water samples collected from the Apalachicola Bay in northwest Florida, USA and amended with a suspension of prey bacteria. Samples were taken at a high temporal resolution (3-hour intervals for 5 days) to capture detailed measurements and changes in the growth responses of HBx and protists, using both culture- and molecular-based methods. The protists were counted by qPCR and flow cytometry. The HBx were counted by qPCR and a culture plating method\n\ncdm_data_type = Other\nVARIABLES:\nTreatment (unitless)\nTime (hours)\nOptical_Density (OD units)\nProtists (counts per ml)\nVibrio (gene copies per reaction)\nHalobacteriovorax (gene copies per reaction)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_880924_v1/index.htmlTable https://www.bco-dmo.org/dataset/880924 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_880924_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_880924_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_880924_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_717562.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_717562 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_717562.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_717562/ public [EN556 LV incubations: DOC, bacterial cell concentration, and bacterial production] - Large volume incubation: DOC, bacterial cell concentration and production from RV/Endeavor EN556, June 2015 (Patterns of activities project) (Latitudinal and depth-related contrasts in enzymatic capabilities of pelagic microbial communities: Predictable patterns in the ocean?) Bacterial protein production, cell counts, and DOC were measured in mesocosm incubations after half the mesocosms were amended with Thalasiosira. See Niskin Bottle and Cast List EN556 to link specific casts and bottles to each experiment: https://www.bco-dmo.org/dataset/717427.\n\ncdm_data_type = Other\nVARIABLES:\ncruise_id (unitless)\nstation (unitless)\ntimepoint (unitless)\ntime_elapsed_hr (hours)\ndepth_id (Depth, unitless)\ndepth (m)\nlat_degdecmin (Latitude, degrees and decimal minutes)\nlon_degdecmin_W (Longitude, degrees and decimal minutes)\nlatitude (degrees_north)\nlongitude (degrees_east)\ncast (unitless)\ntemp (Temperature, degrees Celsius)\nsalinity (Sea Water Practical Salinity, per mil)\ntreatment (unitless)\nmeso_no (unitless)\nDOC_uM (DOC U M, micromolar)\ncells_per_mL (Cells Per M L, cells/milliliter)\nLeu_3H_rep_1 (Leu 3 H Rep 1, pico mol leucine/hour)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_717562_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_717562/index.htmlTable https://www.bco-dmo.org/dataset/717562 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_717562.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_717562&showErrors=false&email= BCO-DMO bcodmo_dataset_717562
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_717495.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_717495 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_717495.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_717495/ public [EN584 LV polysaccharide hydrolysis rates] - Measurements of polysaccharide hydrolase activities in large volume mesocosm incubations RV/Endeavor EN584, July 2016 (Patterns of activities project) (Latitudinal and depth-related contrasts in enzymatic capabilities of pelagic microbial communities: Predictable patterns in the ocean?) Measurements of polysaccharide hydrolase activities in large volume mesocosm incubations RV/Endeavor EN584, July 2016. See Niskin Bottle and Cast List EN584 to link specific casts and bottles to each experiment: https://www.bco-dmo.org/dataset/717427.\n\ncdm_data_type = Other\nVARIABLES:\ncruise_id (unitless)\nstation (unitless)\ncast (unitless)\ndepth_id (Depth, unitless)\ndepth (m)\ntreatment (unitless)\nmeso_no (unitless)\nsubstrate (unitless)\ntimepoint (unitless)\ntime_elapsed_hr (hours)\nrep1_rate (nanomol monosaccharide/liter/hour)\nrep2_rate (nanomol monosaccharide/liter/hour)\nrep3_rate (nanomol monosaccharide/liter/hour)\naverage (nanomol monosaccharide/liter/hour)\nstd_dev (nanomol monosaccharide/liter/hour)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_717495/index.htmlTable https://www.bco-dmo.org/dataset/717495 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_717495.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_717495&showErrors=false&email= BCO-DMO bcodmo_dataset_717495
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3928.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3928 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3928.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3928/ public [fairy basslet census LSI] - Fairy basslet censuses at control and experimental reefs near Lee Stocking Island, Bahamas from 2009-2012 (Lionfish Invasion project) (Ecological Release and Resistance at Sea: Invasion of Atlantic Coral Reefs by Pacific Lionfish) Fairy basslet censuses at control and experimental reefs near Lee Stocking Island, Bahamas from 2009-2012.\n\ncdm_data_type = Other\nVARIABLES:\nsite (text)\nlat_site (decimal degrees)\nlon_site (Longitude, decimal degrees)\nlocation (text)\nlatitude (degrees_north)\nlongitude (degrees_east)\ntreatment (text)\ndate_census (unitless)\nsurvey (dimensionless)\nledge_tag (dimensionless)\ncensus_area (m^2)\ncount_tot (integer)\nlenbin_min (cm)\nlenbin_max (cm)\nnum_fish_len (integer)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_3928_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3928/index.htmlTable https://www.bco-dmo.org/dataset/3928 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3928.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3928&showErrors=false&email= BCO-DMO bcodmo_dataset_3928
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_878635_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_878635_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_878635_v1/ public [Fatty acid measurements - experimental animals] - Fatty acid measurements for animals used in laboratory-based experiments collected from the Gulf of Mexico Estuary near Port Aransas, Texas from 2020 to 2022 (Counter-gradient Flow of Fatty Acids in Marine Food Webs Through Egg Boons) Fatty acid measurements for animals used in laboratory-based experiments collected from the Gulf of Mexico Estuary near Port Aransas, Texas from 2020 to 2022.  Laboratory experiments took place at the Fisheries and Mariculture Laboratory of the University of Texas Marine Science Institute from July 2021 to November 2022.\n\ncdm_data_type = Other\nVARIABLES:\nTaxon (unitless)\nTissue_sampled (unitless)\nLength (cm)\nTank_number (unitless)\nAcclimation_days (days)\nDays_after_acclimation (days)\nTreatment (unitless)\nDiet_fed (unitless)\nNotes (unitless)\nPrimary_check (unitless)\nC14_0_mg (milligrams per gram of dry weight (mg g-1 dw))\nC15_0_mg (milligrams per gram of dry weight (mg g-1 dw))\nC16_0_mg (milligrams per gram of dry weight (mg g-1 dw))\nC16_1n7_mg (milligrams per gram of dry weight (mg g-1 dw))\nC16_2n4_mg (milligrams per gram of dry weight (mg g-1 dw))\nC17_0_mg (milligrams per gram of dry weight (mg g-1 dw))\nC16_3n4_mg (milligrams per gram of dry weight (mg g-1 dw))\nC17_1_mg (milligrams per gram of dry weight (mg g-1 dw))\nC18_0_mg (milligrams per gram of dry weight (mg g-1 dw))\nC18_1n9_mg (milligrams per gram of dry weight (mg g-1 dw))\nC18_1n7_mg (milligrams per gram of dry weight (mg g-1 dw))\nC18_2n6_mg (milligrams per gram of dry weight (mg g-1 dw))\nC18_3n6_mg (milligrams per gram of dry weight (mg g-1 dw))\nC18_3n4_mg (milligrams per gram of dry weight (mg g-1 dw))\n... (54 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_878635_v1/index.htmlTable https://www.bco-dmo.org/dataset/878635 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_878635_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_878635_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_878635_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_709543 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_709543/ public [Ferrozine assay data] - Oxygen consumption rates/zero valen iron dissolution of FeOB (Ferrozine assay) with Kanamycin addition (Collaborative Research: The Role of Iron-oxidizing Bacteria in the Sedimentary Iron Cycle: Ecological, Physiological and Biogeochemical Implications) Oxygen consumption rates/zero valen iron dissolution of FeOB (Ferrozine assay) with Kanamycin addition\n\ncdm_data_type = Other\nVARIABLES:\nvial (unitless)\ndate (unitless)\ntreatment (unitless)\ntime_elapsed (hours)\nFe_II_concentration (mM)\nstandard_deviation (mM)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_709543/index.htmlTable https://www.bco-dmo.org/dataset/709543 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_709543.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_709543&showErrors=false&email= BCO-DMO bcodmo_dataset_709543
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_808413 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_808413.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_808413/ public [Field domoic acid and copepods] - Domoic acid assimilation in copepods by consuming organic polymers and Pseudo-nitzschia from experiments conducted using water samples collected in northern Gulf of Mexico in 2017 and 2018. (The biotic and abiotic controls on the Silicon cycle in the northern Gulf of Mexico) Domoic acid assimilation in copepods by consuming organic polymers and Pseudo-nitzschia. Results from experiments designed to investigate the contribution of organic polymers and Pseudo-nitzschia to domoic acid trophic transfer.  Water samples were collected in the northern Gulf of Mexico in 2017 and 2018.\n\ncdm_data_type = Other\nVARIABLES:\ntime (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)\nlatitude (degrees_north)\nlongitude (degrees_east)\nDate (unitless)\ntime2 (Time, unitless)\nExperiment (unitless)\nTreatment (unitless)\nReplicate_bottle (unitless)\ndDA_conc (D DA Conc, micrograms (µg) per liter (L))\npDAa_conc (P DAa Conc, nanograms (ng) per liter (L))\nCell_tox (picograms (pg) per cell)\nPnitz_density (cells per liter)\nDA_cop_indiv (picograms (pg) per copepod)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_808413_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_808413/index.htmlTable https://www.bco-dmo.org/dataset/808413 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_808413.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_808413&showErrors=false&email= BCO-DMO bcodmo_dataset_808413
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_489283.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_489283 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_489283.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_489283/ public [filter tracer content] - Content of nitrogen and carbon in tracer filters from Cape Flattery, WA from 2010-2011 (Regenerated Nitrogen project) (The Role of Regenerated Nitrogen for Rocky Shore Productivity) We evaluated the role of mussels by adding 15N-labeled NH4+ to an assemblage\nof tidepools where they were either present at natural abundance levels, or\nabsent through manual removal. \\u00a0The role of phototrophs was separately\nexamined by conducting these experiments both during the day and at night.\n\\u00a0The tidal height of pools varied between 1.2 to 1.5 m above Mean Lower\nLow Water (MLLW). Tidepools were thus isolated from each other as well as the\nnearshore environment during the low tide period when experiments were\nconducted. Each experiment included 4 to 5 mussel removal (MR) tidepools\n(since 2002) and 4 to 5 mussel control (MC) tidepools with natural mussel\ndensities. \\u00a0In June 2010, we performed daytime NH4+ tracer experiments\nand in August 2010 nighttime experiments using the same tidepools. The\nfollowing year (July 2011) these experiments were repeated with the addition\nof bottle incubations (see below) to evaluate the effects of suspended\ntidepool components and extended sampling for 6 days after the initial 15N\naddition to test for long-term retention of NH4+. \\u00a0During the 2011\nexperiments, unforeseen rain reduced the salinity in some pools by up to 51%,\nand we have attempted to correct for the expected dilution of NH4+ in our\ntidepool rate calculations.\n \nBecause isotope enrichment levels were relatively low, we used the\nconventional delta notation instead of atom% to describe variations in 15N\nenrichment (where delta-15NH4+ = {(15N:14N sample \\u00f7 15N:14N standard)\n-1}\\u00d71000\\u2030, where the standard is atmospheric N2. \\u00a0Tracer\nlabeled ammonium chloride (15NH4Cl) was added to the pools to approximate a\n1000\\u2030 enrichment in 2010 (doubling the 15N-NH4+ concentration) and a\n2000\\u2030 enrichment in 2011(tripling the 15N-NH4+ concentration). 15N\nnatural abundance is only 0.365% and these tracer additions thus had a\nnegligible effect on the overall NH4+ concentrations increasing them by only\n~0.4% and ~0.8%, respectively. Tidepool volumes were estimated\nspectrophotometrically using varying concentrations of food dye (Pfister\n1995). Together with estimates of NH4+ concentration (from 2009 data), we\nestimated the tracer addition required to achieve the targeted 15N\nenrichments. However, the actual initial enrichments varied substantially,\n684.4 - 2406.4\\u2030 in 2010 and 781.4 - 3880.2\\u2030 in 2011, likely due to\nerror in tidepool volume estimation and natural variations in initial NH4+\nconcentrations. Fortunately, we sampled immediately following each tracer\naddition allowing for the determination of the true initial 15N enrichment.\n\\u00a0\n \nPrior to tracer addition at ebb tide, 100 mL of tidepool water was syringe-\nfiltered (Whatman GF/F) into separate HDPE bottles for natural abundance\n15NH4+ and concentration determination. \\u00a0To each pool, tracer 15NH4+ was\nthen added and distributed by stirring with a stick. Water samples were\nimmediately collected for measuring initial 15N enrichment and subsequently at\n2, 4, and 6 hour intervals to determine isotope and concentration time\ncourses. All water samples were frozen until analysis. Tidepool oxygen, pH,\nand temperature (Hach HQ4D) were also collected at ~ 2 h intervals throughout\nthe experiment.\n \nIn 2011 we also assessed the contribution of the suspended microbial community\nto NH4+ cycling by enclosing tidepool water in a 250 mL transparent\npolycarbonate incubation bottle. Following tracer addition, the bottle was\nfilled, then left to float in the tidepool for the duration of the experiment.\nSamples from bottles were filtered as described both immediately after\ncontainment and at the end of the experiment (~6 h later).\n \nWe assessed macroalgal contribution to NH4+ removal by transplanting two\ntidepool-dwelling algae species. \\u00a0Prionitis sternbergii were sampled 2\nweeks prior to the experiment for baseline natural abundance 15N values and\ntransplanted into the pools with Z-Spar Epoxy (Pfister 2007). On the day of\nthe experiment, the red-alga, Corallina vancouveriensis from a single source\npatch, was also sampled for 15N natural abundance, inserted into pieces of\nStyrofoam, and floated in each pool.\n \nAt the end of each experiment (~6 h sampling point), we sampled tidepool\nparticulate organic material (POM) by filtering through combusted GF/F filters\nuntil they clogged (~ 600 mL), comparing these samples with POM similarly\nsampled from the immediate nearshore. \\u00a0Floating Corallina spp. samples\nwere collected into clean Eppendorf tubes, and similar sized pieces of\nPrionitis spp. were collected from each pool into clean foil packets.\\u00a0  \n We evaluated the extent of longer-term 15N tracer retention in 2011 by\nsampling tidepool water, POM and transplanted Prionitis 1, 3, and 6 days\nfollowing tracer addition. We sampled at ebb tide and at again at slack water\njust prior to high tide on the first day after tracer addition (that is, 24 h\nlater) and at slack water prior to high tide on Day 3 and 6.\\u00a0\n \nRelevant References:\n \n2014\\. Pather, S., C. A. Pfister, M. Altabet, D. M. Post. Ammonium cycling in\nthe rocky intertidal: remineralization, removal and retention. Limnology and\nOceanography\n59:361-372.\\u00a0[http://aslo.org/lo/toc/vol_59/issue_2/0361.htm](\\\\http://aslo.org/lo/toc/vol_59/issue_2/0361.html\\\\)\n \nDOI for this dataset:\\u00a0The role of regenerated nitrogen for rocky shore\nproductivity, Cape Flattery, Washington, 2010 &\n2011.\\u00a0Handle:\\u00a0[http://hdl.handle.net/1912/6420](\\\\http://hdl.handle.net/1912/6420\\\\).\\u00a0DOI:10.1575/1912/6420\n \nRelated Datasets:  \n[ammonium removal by seaweeds](\\\\https://www.bco-dmo.org/dataset/489420\\\\)  \n[natural abundance N and C filter content](\\\\http://www.bco-\ndmo.org/dataset/489310\\\\)  \n[tidepool ammonium and mussels](\\\\https://www.bco-dmo.org/dataset/488860\\\\)  \n[tidepool incubation ammonium](\\\\https://www.bco-dmo.org/dataset/489085\\\\)\n\ncdm_data_type = Other\nVARIABLES:\nsite (unitless)\n... (12 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_489283_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_489283/index.htmlTable https://www.bco-dmo.org/dataset/489283 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_489283.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_489283&showErrors=false&email= BCO-DMO bcodmo_dataset_489283
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_778426.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_778426 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_778426.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_778426/ public [Final spores] - Pterosiphonia bipinnata and Corallina vancouveriensis final experiment shear and percent remaining at Deadman Bay on San Juan Island, Washington (Effects of Ocean Acidification on Coastal Organisms: An Ecomaterials Perspective) Pterosiphonia bipinnata and Corallina vancouveriensis final experiment shear and percent remaining at Deadman Bay on San Juan Island, Washington\n\ncdm_data_type = Other\nVARIABLES:\nTreatment (unitless)\nShear (Pascals (Pa))\nPercentRemaining (Percent Remaining, unitless)\nSpecies (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nlocation (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_778426_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_778426/index.htmlTable https://www.bco-dmo.org/dataset/778426 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_778426.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_778426&showErrors=false&email= BCO-DMO bcodmo_dataset_778426
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_813210 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_813210.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_813210/ public [Flow Cytometry Results] - Results of the quantification of symbiont cell numbers from 400 Acropora hyacinthus colonies subjected to experimental bleaching in the summer of 2018 in Palau. (Predicting the global location of heat tolerant corals: Palau patch reefs as a general model) Results of the quantification of symbiont cell numbers from 400 Acropora hyacinthus colonies subjected to experimental bleaching in the summer of 2018 in Palau.\n\ncdm_data_type = Other\nVARIABLES:\nSample (dimensionless)\nTreatment (unitless)\nTemperature (degrees Celsius)\nSample_ID (dimensionless)\nALLEVENTS_Conc (cells/ml)\nSYMBIODINIUM_Conc (cells/ml)\nNumber_of_Events (unitless)\nCell_Count (cells/ul)\nTotal_Volume (microliters)\nAcquisition_Time (seconds)\nNegative_Total_Count (various)\nNegative_Events (cells/ml)\nNegative_Sym_Conc (various)\nNegative_Cells (cell/ul)\nNegative_Total_Vol (microliters)\nNegative_Acquisition_Time (seconds)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_813210/index.htmlTable https://www.bco-dmo.org/dataset/813210 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_813210.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_813210&showErrors=false&email= BCO-DMO bcodmo_dataset_813210
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_777130 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_777130.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_777130/ public [Growth - pCO2 x DO effects on Menidia menidia] - Growth data from static and fluctuating pCO2 x dissolved oxygen (DO) experiments on Menidia menidia (Collaborative research: Understanding the effects of acidification and hypoxia within and across generations in a coastal marine fish) Coastal ecosystems experience substantial natural fluctuations in pCO2 and dissolved oxygen (DO) conditions on diel, tidal, seasonal and interannual timescales. Rising carbon dioxide emissions and anthropogenic nutrient input are expected to increase these pCO2 and DO cycles in severity and duration of acidification and hypoxia. How coastal marine organisms respond to natural pCO2 \\u00d7 DO variability and future climate change remains largely unknown. Here, we assess the impact of static and cycling pCO2 \\u00d7 DO conditions of various magnitudes and frequencies on early life survival and growth of an important coastal forage fish, Menidia menidia. Static low DO conditions severely decreased embryo survival, larval survival, time to 50% hatch, size at hatch and post-larval growth rates. Static elevated pCO2 did not affect most response traits, however, a synergistic negative effect did occur on embryo survival under hypoxic conditions (3.0 mg L-1). Cycling pCO2 \\u00d7 DO, however, reduced these negative effects of static conditions on all response traits with the magnitude of fluctuations influencing the extent of this reduction. This indicates that fluctuations in pCO2 and DO may benefit coastal organisms by providing periodic physiological refuge from stressful conditions, which could promote species adaptability to climate change.\n\ncdm_data_type = Other\nVARIABLES:\nExperiment (unitless)\nTreatment (unitless)\nCycling_pattern (unitless)\nTank_No (unitless)\nHatch_length (millimeters (mm))\nHatch_length_SE (millimeters (mm))\nMean_growth_rate (millimeters per day (mm day-1))\nMean_growth_rate_SE (millimeters per day (mm day-1))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_777130/index.htmlTable https://www.bco-dmo.org/dataset/777130 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_777130.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_777130&showErrors=false&email= BCO-DMO bcodmo_dataset_777130
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_921060_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_921060_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_921060_v1/ public [Gulf of Finland CDOM Absorption Coefficients] -  (Transforming our understanding of DIC Photoproduction in Oceanic Waters) These data are chromophoric dissolved organic matter (CDOM) Naperian absorption coefficients from the LightCycle DOM photodegradation experiments conducted in the western Gulf of Finland, Baltic Sea. The LightCycle experiments were conducted as a part of the AQUACOSM JOMEX project: Systems Responses to A Pulse of Dissolved Organic Carbon, at the Tvärminne Mesocosm Facility (TMF, Tvärminne Zoological Station (TZS), University of Helsinki). \n\nThe JOMEX experiment ran from 26 June to 10 July 2019 and the mesocosms were divided into three treatment groups: 1) three control mesocosms with no humic substances or nutrients added, 2) three humic-amended mesocosms with only humic substances added to a final concentration of 2 mg L−1 in each mesocosm and three humic+nutrients-amended mesocosms with humic substances (2 mg L−1 final concentration) and 3) NH4Cl and KH2PO4 (80 μg L−1 N and 20 μg L−1 P final concentrations) added. \n\nSurface (1 m) water samples for the LightCycle experiments were collected from one each of control, humic-amended and humic+nutrients-amended mesocosms, immediately after the amendment (day 1) and 2, 5, 7, 9 and 12 days after the amendment (days 3, 6, 8, 10 and 13). These water samples were filtered with 0.2 mm filters and irradiated under a solar simulator. \n\nCDOM absorbance at different irradiation time points were measured for these experiments using a Shimadzu UV-2501PC UV-VIS recording spectrophotometer or an Agilent 8453 UV-visible Spectrophotometer, and converted to Naperian absorption coefficients. \n\nThe measurements of CDOM absorption and the subsequent calculation of CDOM fading (decrease in absorption) offered clues to the degradation of CDOM, and provided insights into the potential of photochemistry to remove added terrestrial dissolved organic matter (DOM) and the interactions of DOM photochemistry with eutrophication in this Baltic Sea system, where there are increasing concerns that climate change and anthropogenic activities can lead to increased terrestrial input of humic substances to surface waters and browning of surface waters. \n\nThese data were collected by Kun Ma and Jay Brandes of the Skidaway Institute of Oceanography, Department of Marine Sciences, University of Georgia.\n\ncdm_data_type = Other\nVARIABLES:\nIrradiation_time (hours (h))\n... (554 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_921060_v1/index.htmlTable https://www.bco-dmo.org/dataset/921060 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_921060_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_921060_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_921060_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_664990 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_664990.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_664990/ public [Herbivore exclusion experiment] - Data from an herbivore exclusion experiment conducted on Abaco Island in the Bahamas from 2014-2016 (Mangrove Die-off project) (An interdisciplinary approach to elucidating the causes of widespread mangrove die-off) Data from an herbivore exclusion experiment conducted on Abaco Island in the Bahamas from 2014-2016 (Mangrove Die-off project)\n\ncdm_data_type = Other\nVARIABLES:\nyear (unitless)\nmonth (unitless)\nsampling (unitless)\nlocation (unitless)\nblock (unitless)\ntreatment (unitless)\nleaves_num (count)\ndisease_leaves (count)\nchewed_leaves (count)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_664990/index.htmlTable https://www.bco-dmo.org/dataset/664990 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_664990.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_664990&showErrors=false&email= BCO-DMO bcodmo_dataset_664990
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_710033.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_710033 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_710033.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_710033/ public [Initial spores] - Pterosiphonia bipinnata and Corallina vancouveriensis initial experiment attachment and duration at Deadman Bay on San Juan Island, Washington (Effects of Ocean Acidification on Coastal Organisms: An Ecomaterials Perspective) Pterosiphonia bipinnata and Corallina vancouveriensis initial experiment attachment and duration at Deadman Bay on San Juan Island, Washington\n\ncdm_data_type = Other\nVARIABLES:\ntime2 (Time, hours)\nAttached (unitless)\nTreatment (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nlocation (unitless)\nSpecies (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_710033_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_710033/index.htmlTable https://www.bco-dmo.org/dataset/710033 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_710033.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_710033&showErrors=false&email= BCO-DMO bcodmo_dataset_710033
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_715405 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_715405.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_715405/ public [Invertebrate Survival] - Invertebrate survival: Invertebrate survival rates from feeding experiments, conducted at Bodega Marine Laboratory, where food sources (eelgrass (Zostera marina) genotypes) were varied (Connecting genetic diversity to ecosystem functioning: links between genetic diversity, relatedness and trait variation in a seagrass community) Seagrass meadows are among the world's most productive ecosystems, and as in many other systems, genetic diversity is correlated with increased production. However, only a small fraction of seagrass production is directly consumed, and instead much of the secondary production is fueled by the detrital food web. Here, we study the roles of plant genetic diversity and grazer species diversity on detrital consumption in California eelgrass Zostera marina meadows. We used three common mesograzers\\u2014an amphipod, Ampithoe lacertosa, an isopod, Idotea resecata, and a polychaete, Platynereis bicanaliculata. In this experiment, we raised communities of either Ampithoe lacertosa or communities of all three mesograzers on either no food, eelgrass detritus from a single clone, or eelgrass detritus from 3 of from 6 different clones. Under monospecific grazer assemblages, plant genetic identity but not diversity influenced detritus consumption. However, more realistic, diverse mesoconsumer communities combined with high plant-detrital genotypic diversity resulted in greater consumption and grazer survival. These data are illustrated in figure 6 of Reynolds et al., 2017 (DOI:10.1111/oik.04471).\n\ncdm_data_type = Other\nVARIABLES:\nDays_after_exp_setup (unitless)\nDetrital_genotypes_present (unitless)\nTreatment (unitless)\nInvertebrate_survival_pcnt (unitless (percent))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_715405/index.htmlTable https://www.bco-dmo.org/dataset/715405 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_715405.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_715405&showErrors=false&email= BCO-DMO bcodmo_dataset_715405
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_723266 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_723266.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_723266/ public [Irradiance exposure experiments] - Photophysiological responses of two dinoflagellate species used in natural high light exposure experiments (Protist Signaling project) (Environmental stress and signaling based on reactive oxygen species among planktonic protists) Photophysiological responses of two dinoflagellate species used in natural high light exposure experiments (Protist Signaling project)\n\ncdm_data_type = Other\nVARIABLES:\nExperiment_ID (unitless)\nExperiment_Date (unitless)\nDinoflagellate_species (unitless)\nMax_PAR (umol photons m^-2 s^-1)\nTotal_PAR (mol photons m^-2)\nSampling_Time (unitless)\nTreatment (unitless)\nSample_Number (unitless)\nFvFm (FV FM, unitless)\ntime (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_723266/index.htmlTable https://www.bco-dmo.org/dataset/723266 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_723266.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_723266&showErrors=false&email= BCO-DMO bcodmo_dataset_723266
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_907463_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_907463_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_907463_v1/ public [Karlodinium veneficum cellular carbon and nitrogen data] - Cellular carbon (C) and nitrogen (N) data of the Karlodinium veneficum growth experiment conducted in the Horn Point Laboratory between June 2021- January 2022. (Ecology and Oceanography of Harmful Algal Blooms) Using a multifactorial design, we studied the interactive effects of temperature (15, 20, 25, 28 and 30 0C), salinity (5, 10, 15, 20 and 30) and light (low-100 and high-300 μmol photons m−2 s−1) on growth, thermal niche properties and cellular carbon (C) and nitrogen (N) of the toxic dinoflagellate, Karlodinium veneficum, originated from the Chesapeake Bay. Here we report the daily growth data measured as raw fluorescence at each experimental combination  in quadruplicates and the C and N cell quota data measured in the final samples for each experimental combination in duplicates.\n\ncdm_data_type = Other\nVARIABLES:\nsample_no (unitless)\ntreatment (unitless)\nfiltered_volume (milliliters (mL))\nCell_density (cells per mL (cells/mL))\nN_percent (percent (%))\nC_percent (percent (%))\nN_mg (milligrams (mg))\nC_mg (milligrams (mg))\nCarbon_blank_corrected (milligrams (mg))\nC_to_N_mass (unitless)\nC_umol (micromoles (umol))\nN_umol (micromoles (umol))\nC_to_N_atomic (unitless)\nC_per_cell (picograms of Carbon per cell (pg/cell))\nN_per_cell (picograms of Nitrogen per cell (pg/cell))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_907463_v1/index.htmlTable https://www.bco-dmo.org/dataset/907463 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_907463_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_907463_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_907463_v1
log in [Lab experimental time series of T. suecica densities under fluctuating temperatures] - Time series of T. suecica densities under fluctuating temperatures experiment from May 2023 to Aug 2023 (A novel time-structured framework to account for the cryptic effects of temperature fluctuations on population dynamics) This dataset includes the densities (count/mL) of the alga Tetraselmis suecica (LB 2286) cultures grown from a UTEX sample. The counts were obtained using a Beckman Coulter Z2 Particle Counter in the lab over a five-day period under different experimental temperature regimes. The experiment took place between 2023-05-23 and 2023-08-18. The goal of the experiment was to determine how mean temperature and temperature fluctuation frequency affected the growth rate of T. suecica. By comparing the growth rate of T. suecica under constant vs. variable temperatures, one can determine the historical or legacy effects of past temperature variation on subsequent organismal performance. These experiments were conducted by members of the Brian Helmuth Lab at Northeastern University.\n\ncdm_data_type = Other\nVARIABLES:\nfull_ID (unitless)\ntime (Measurement_datetime, seconds since 1970-01-01T00:00:00Z)\ndays_since_start (days)\ntemperature (degrees Celsius)\ntreatment (unitless)\nreplicate (unitless)\ncount_replicate (unitless)\nfinal_count (cells/mL)\n BCO-DMO bcodmo_dataset_953492_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_755712 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_755712.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_755712/ public [Lab urchin grazing assay fx size] - Laboratory study of estimates of per capita sea urchin grazing rates on Clathromorphum nereostratum, evaluated as a function of sea urchin size (Ocean Acidification:  Century Scale Impacts to Ecosystem Structure and Function of Aleutian Kelp Forests) Estimates of per capita sea urchin grazing rates on Clathromorphum nereostratum, evaluated as a function of sea urchin size. Assays were performed under ambient conditions in a controlled mesocosm setting, using the urchin Strongylocentrotus polyacanthus.\n\ncdm_data_type = Other\nVARIABLES:\ntreatment (millimeters)\nreplicate (unitless)\nurchin_diameter_mm (millimeters)\nurchin_biomass_grams (grams)\ncca_mass_initial_grams (grams)\ncca_mass_final_grams (grams)\ncorrection_factor (unitless)\ncorrected_cca_mass_initial_grams (grams)\namount_grams_consumed (grams)\namount_mg_consumed (millimeters)\namount_mg_consumed_day (millimeters)\namount_mg_consumed_d_gram_urchin (millimeters)\nmax_depth_grazed_mm (millimeters)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_755712/index.htmlTable https://www.bco-dmo.org/dataset/755712 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_755712.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_755712&showErrors=false&email= BCO-DMO bcodmo_dataset_755712
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_777212.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_777212 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_777212.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_777212/ public [LesionDistance_Alizarin] - Effect of distance between coral lesions on coral linear extension from experiments in Moorea, French Polynesia from May, 2013 through May, 2014 (Spatial patterns of coral-vermetid interactions: short-term effects and long-term consequences) Experimental corals were artificially damaged using a waterpik with lesion centroids separated by 1.2cm and 3.5cm, and then dyed with Alizarin S.  After 1 year, corals were bisectioned, photographed and linear extension measured using Image J at each polyp\\u2019s growth lines.\n\ncdm_data_type = Other\nVARIABLES:\nCoral (unitless)\nTreatment (unitless)\nAngle (degrees)\nGrowth (centimeters (cm))\nlatitude (degrees_north)\nlongitude (degrees_east)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_777212_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_777212/index.htmlTable https://www.bco-dmo.org/dataset/777212 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_777212.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_777212&showErrors=false&email= BCO-DMO bcodmo_dataset_777212
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_777110.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_777110 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_777110.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_777110/ public [LesionDistance_GrowthHealing] - Effect of distance between coral lesions on tissue regeneration and skeletal growth at two sites on the backreef on either side of Cook’s Bay in Moorea, French Polynesia from May, 2012 through July, 2012 (Spatial patterns of coral-vermetid interactions: short-term effects and long-term consequences) Experimental corals were artificially damaged using a waterpik with lesion centroids separated by 1.2cm, 3.5cm, and 6cm (or no damage for the control), and buoyantly weighed.  After 20 and 39 days, corals were re-weighed to determine buoyant mass and skeletal growth.  Coral lesions were also photographed and images analyzed to assess the % of lesion with regenerated tissue.\n\ncdm_data_type = Other\nVARIABLES:\nCoral (unitless)\nTreatment (unitless)\nBlock (unitless)\nInitial_Mass (grams (g))\nHalfway_Mass (grams (g))\nFinal_Mass (grams (g))\nGrowth_Midpoint (grams (g))\nGrowth_Final (grams (g))\nHealing_Mid (unitless)\nHealing_Final (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_777110_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_777110/index.htmlTable https://www.bco-dmo.org/dataset/777110 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_777110.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_777110&showErrors=false&email= BCO-DMO bcodmo_dataset_777110
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3907 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3907.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3907/ public [lionfish cleaner bottle expt] - Cleaner and host species observed on Bahamian reefs under varying experimental conditions in Eleuthera, Bahamas in 2012 (Lionfish Invasion project) (Ecological Release and Resistance at Sea: Invasion of Atlantic Coral Reefs by Pacific Lionfish) Cleaner and host species observed on Bahamian reefs under varying experimental conditions in Eleuthera, Bahamas in 2012 (Lionfish Invasion project).\n\ncdm_data_type = Other\nVARIABLES:\nsite (text)\nlatitude (degrees_north)\nlongitude (degrees_east)\nstation_descrip (text)\ntreatment (text)\ndate (unitless)\ntime_start (HHMM.mm)\ntime_end (HHMM.mm)\ntime_elapsed (MM:SS)\nsequence (dimensionless)\nspecies_cleaner1 (text)\nspecies_code_cleaner1 (text (code))\nlen_tot_cleaner1 (cm)\nspecies_cleaner2 (text)\nspecies_code_cleaner2 (text (code))\nlen_tot_cleaner2 (cm)\nspecies_cleaner3 (text)\nspecies_code_cleaner3 (text (code))\nlen_tot_cleaner3 (cm)\nspecies_client (text)\nspecies_code_client (text (code))\nlen_tot_client (cm)\nnotes (text)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_3907_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3907/index.htmlTable https://www.bco-dmo.org/dataset/3907 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3907.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3907&showErrors=false&email= BCO-DMO bcodmo_dataset_3907
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3910.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3910 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3910.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3910/ public [lionfish-goby density expt] - Results of a manipulative field experiment on the effect of lionfish predation on bridled goby populations, conducted at Lee Stocking Island, Bahamas from 2009-2012 (Lionfish Invasion project) (Ecological Release and Resistance at Sea: Invasion of Atlantic Coral Reefs by Pacific Lionfish) Results of a manipulative field experiment on the effect of lionfish predation on bridled goby populations, conducted at Lee Stocking Island, Bahamas from 2009-2012.\n\ncdm_data_type = Other\nVARIABLES:\nsite (text)\nlatitude (degrees_north)\nlongitude (degrees_east)\ntreatment (text)\ntreatment_code (text)\nlocation (text)\ntarget_goby_abund (integer)\nactual_starting_goby_abund (integer)\nvisit (integer)\nday (dd (01 to 31))\nmonth (mm (01 to 12))\nyear (unitless)\ngoby_abund (integer)\nmortality\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_3910_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3910/index.htmlTable https://www.bco-dmo.org/dataset/3910 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3910.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3910&showErrors=false&email= BCO-DMO bcodmo_dataset_3910
log in [Lobster Larvae Respirometry Data] - Oxygen consumption by lobster larvae at different temperatures using closed cell respirometry for lobster larvae from Gulf of Maine near Boothbay Maine from 2021 to 2023 (Lobster Thermal Thresholds project) (RUI: Collaborative Research: Linking physiological thermal thresholds to the distribution of lobster settlers and juveniles) We used the American lobster (Homarus americanus lsid:marinespecies.org:taxname:156134) in the Gulf of Maine as a model system to define thermal tolerance in larvae and establish mechanistic linkages between thermal tolerance of the individual larva and the patterns of settlement in the field.  We assessed and compared the thermal tolerances of larvae reared in the laboratory using conventional methods with larvae captured in the wild, and examined ontogenetic changes in thermal tolerance.  The upper and lower thermal thresholds larval stages I-IV and the first juvenile stage were defined in part by oxygen consumption and scope for activity (defined as the difference in oxygen consumption between larvae at rest and larvae swimming actively).  This data set includes the raw oxygen consumption data obtained through closed system microrespirometry and subsequently used to calculate scope for activity.  These data were collected between 2021-2023 at Bigelow Laboratory for Ocean Sciences, led by Eric Annis.\n\ncdm_data_type = Other\nVARIABLES:\nLarva_ID (unitless)\nTreatment_Temperature (degrees C)\nDiet (unitless)\nRearing_Temperature (degrees C)\nDevelopmental_Stage (unitless)\nIndividual_Larva_Number (unitless)\nYear (unitless)\nHatch_or_Capture_Date (unitless)\nTrial_Date (unitless)\nTrial_Time_Local_EST (unitless)\ntime (Trial_datetime_utc, seconds since 1970-01-01T00:00:00Z)\nTreatment (unitless)\nO2_Slope (micromole per liter per hour (umol/l/h))\nChamber_Number (unitless)\nChamber_Volume (liters (l))\nTreatment_O2_Consumption (micromole per hour (umol/h))\nControl_O2_Consumption (micromole per hour (umol/h))\nControl_Corrected (micromole per larva per hour (umol/larva/h))\nDry_Weights (milligram (mg))\nO2_Consumption_Normalized (micromole per milligram of larva per hour (umol/mg larva/hr)\n BCO-DMO bcodmo_dataset_939782_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_925751_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_925751_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_925751_v1/ public [Macroalgal biodiversity experiment: coral growth and tissue mortality data] - Coral (Pocillopora verrucosa) growth and tissue mortality from experimental field plots in Moʻorea, French Polynesia in 2021 (Positive Effects of Coral Biodiversity on Coral Performance: Patterns, Processes, and Dynamics) Hundreds of studies now document positive relationships between biodiversity and critical ecosystem processes, but as ecological communities worldwide shift towards new species configurations, less is known regarding how biodiversity of undesirable species will shape the functioning of ecosystems or foundation species. We manipulated macroalgal species richness in experimental field plots to test whether and how identity and diversity of competing macroalgae affected the growth, survival, and microbiome of a common coral in Moʻorea, French Polynesia. These data include coral (Pocillopora verrucosa) percent growth and tissue mortality among corals outplanted into 25 cm x 21 cm experimental plots in the back reef lagoon on the north coast of Moʻorea, French Polynesia (17°28′37″S 149°50′21″W). We varied the macroalgal community on the upper surface of each plot by outplanting monocultures holding similar masses of: (1) Sargassum pacificum, (2) Turbinaria ornata, or (3) Amansia rhodantha, as well as (4) polycultures containing all three species (12 plots per treatment; Figure 1 of Clements et al., 2024). There were also two additional treatments: (5) plots with plastic algal mimics to control for effects of shading or abrasion unrelated to the biotic properties of live seaweeds and 6) control plots where corals, but not living algae or physical mimics, were present (n = 12 plots/treatment).\n\nThis dataset includes coral (Pocillopora verrucosa) growth and tissue mortality at 9 weeks for plots with no algae (control), plastic algal mimics, monocultures of Amansia rhodantha, Turbinaria ornata, or Sargassum pacificum, and polycultures containing all three algal species.\n\ncdm_data_type = Other\nVARIABLES:\nID (unitless)\nTreatment (unitless)\nPlot (unitless)\nColony (unitless)\nPosition (unitless)\nGrowth_percent (unitless)\nMortality_percent (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_925751_v1/index.htmlTable https://www.bco-dmo.org/dataset/925751 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_925751_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_925751_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_925751_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_922818_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_922818_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_922818_v1/ public [Macrophytes' amelioration of seawater acidity: Comparison among species] - Macrophytes' amelioration of seawater acidity: Comparison among four species of marine macrophytes (Ulva lactuca, Zostera marina, Fucus vesiculosus and Saccharina latissima) from the Gulf of Maine from June to July 2015 (REU Site: Bigelow Laboratory for Ocean Sciences - Undergraduate Research Experience in the Gulf of Maine and the World Ocean) An experiment examining the effects of increased CO2 concentrations upon the capacity of the different species of marine macrophytes to ameliorate seawater acidity via several assays in enclosed well-mixed, airtight chambers with no headspace, was conducted indoors at the Bigelow Laboratory for Ocean Sciences (Maine, USA), in June-July 2015. We explored the individual capacities of four species of marine macrophytes (Ulva lactuca, Zostera marina, Fucus vesiculosus and Saccharina latissima) to ameliorate seawater acidity in experimentally elevated pCO2. \n\nThis dataset includes data from experiment 1, comparison among species, described in the manuscript: Optimizing marine macrophyte capacity to locally ameliorate ocean acidification under variable light and flow regimes: Insights from an experimental approach (Ricart, A. M. et al. 2023).\n\ncdm_data_type = Other\nVARIABLES:\nSample (unitless)\nSpecies (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ndate_start (unitless)\ndate_end (unitless)\nTreatment (microatmospheres)\nLiters (liters (L))\nHours (unitless)\nDry_Weight (grams (g))\nSalinity (unitless)\nTemperature (degrees Celcius (°C))\nInitial_Dissolved_Oxygen (micromolar per liter (uM/L))\nInitial_pH (total scale)\nInitial_ALK (micromolar per kilogram (uM/kg))\nInitial_pCO2 (microatmospheres)\ndelta_DO_norm (unitless)\ndelta_DIC_norm (unitless)\ndelta_pH_norm (unitless)\ndelta_omega_norm (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_922818_v1_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_922818_v1_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_922818_v1/index.htmlTable https://www.bco-dmo.org/dataset/922818 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_922818_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_922818_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_922818_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_641479.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_641479 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_641479.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_641479/ public [MarBio. 2016: calcification and biomass] - Calcification Rates and Biomass of 4 Coral Species, 2 Temperatures and 2 pCO2 Levels from Experiments at LTER site in Moorea, French Polynesia, 2011 (OA_Corals project) (RUI: Ocean Acidification- Category 1- The effects of ocean acidification on the organismic biology and community ecology of corals, calcified algae, and coral reefs) Area-normalized calcification (mg cm-2 d-1) and biomass normalized\ncalcification (mg mg-1) for Pocillopora meandrina, massive Porites spp.,\nAcropora pulchra and Millepora platyphylla, as a function of pCO2 (408\n\\u00b5atm versus 913 \\u00b5atm) and temperature (28.0\\u00b0C and 30.1\\u00b0C),\ncollected in Moorea 2011.\n \nRelated Reference:  \n Darren Brown, Peter J. Edmunds. Differences in the responses of three\nscleractinians and the hydrocoral Millepora platyphylla to ocean\nacidification. Marine Biology, 2016 (in press).\n \nRelated Dataset:  \n[MarBio. 2016: tank conditions](\\\\https://www.bco-dmo.org/dataset/641759\\\\)\n\ncdm_data_type = Other\nVARIABLES:\nlocation (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nspecies (unitless)\npCO2 (P CO2, unitless)\ntemp (Temperature, unitless)\ntank (unitless)\ntreatment (unitless)\ncalcification (cm-2 day-1)\nbiomass (mg mg-1)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_641479_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_641479/index.htmlTable https://www.bco-dmo.org/dataset/641479 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_641479.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_641479&showErrors=false&email= BCO-DMO bcodmo_dataset_641479
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_641759.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_641759 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_641759.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_641759/ public [MarBio. 2016: tank conditions] - Tank seawater conditions from Coral/Temperature/pCO2 Experiments at LTER site in Moorea, French Polynesia, 2011 (OA_Corals project) (RUI: Ocean Acidification- Category 1- The effects of ocean acidification on the organismic biology and community ecology of corals, calcified algae, and coral reefs) Summary of conditions in the eight tanks assigned randomly to create four\ntreatments of AT-ACO2.\n \nRelated Reference:  \n Darren Brown, Peter J. Edmunds. Differences in the responses of three\nscleractinians and the hydrocoral Millepora platyphylla to ocean\nacidification. Marine Biology, 2016 (in press).\n \nRelated Dataset:  \n[MarBio. 2016: calcification and biomass](\\\\http://www.bco-\ndmo.org/dataset/641479\\\\)\n\ncdm_data_type = Other\nVARIABLES:\nlocation (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\npCO2 (P CO2, unitless)\ntank (unitless)\ntemp (Temperature, unitless)\ntreatment (unitless)\npCO2_uatm (P CO2 Uatm, micro-atmospheres)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_641759_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_641759/index.htmlTable https://www.bco-dmo.org/dataset/641759 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_641759.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_641759&showErrors=false&email= BCO-DMO bcodmo_dataset_641759
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_922037_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_922037_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_922037_v1/ public [Measurements of treatment tub seawater conditions: pH and total alkalinity] - pH and total alkalinity measurements of treatment tub seawater during lab experiments conducted in spring 2022. (Influence of environmental pH variability and thermal sensitivity on the resilience of reef-building corals to acidification stress) Ocean acidification (OA) resulting from anthropogenic CO2 emissions is impairing the reproduction of marine organisms. While parental exposure to OA can protect offspring via carryover effects, this phenomenon is poorly understood in many marine invertebrate taxa. We examined how parental exposure to acidified (pH 7.40) versus ambient (pH 7.72) seawater influenced reproduction and offspring performance across six gametogenic cycles (13 weeks) in the estuarine sea anemone Nematostella vectensis. This dataset contains data resulting from measurements of treatment tub seawater conditions, including pH and total alkalinity.\n\ncdm_data_type = Other\nVARIABLES:\nDate (unitless)\nTreatment (unitless)\npH (Arbitrary on pH scale)\nmV (millivolts (mV))\nSalinity (unitless)\nTemperature (Degrees Celsius)\nTA_1 (umol/kg)\nTA_2 (umol/kg)\nTA_average (umol/kg)\nTA (mol/kg)\nAlkalinity (mol/kg*10^-3)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_922037_v1/index.htmlTable https://www.bco-dmo.org/dataset/922037 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_922037_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_922037_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_922037_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_948590_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_948590_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_948590_v1/ public [Metatranscriptomic nutrient response experiments - 2021 DY131] - Data from nutrient manipulation experiments (conducted on EXPORTS cruise DY131) aimed at relieving or inducing nutrient stress in phytoplankton and quantifying these responses using metatranscriptomic sequencing (Collaborative Research: Diatoms, Food Webs and Carbon Export - Leveraging NASA EXPORTS to Test the Role of Diatom Physiology in the Biological Carbon Pump) This dataset includes data from nutrient manipulation experiments aimed at relieving or inducing nutrient stress in phytoplankton and quantifying these responses using metatranscriptomic sequencing. Experiments were conducted by adding key macronutrients (N, P, Si) and Fe in different combinations over different growth periods, simulating potential alleviation of in situ nutrient stress or the induction of nutrient stress. Experiments were conducted on the EXports Processes in the Oceans from RemoTe Sensing (EXPORTS) cruise DY131 in the North Atlantic during May of 2021.\n\ncdm_data_type = Other\nVARIABLES:\nCruise (unitless)\ntime (Iso_datetime_utc, seconds since 1970-01-01T00:00:00Z)\nDate_UTC (unitless)\nTime_UTC (unitless)\nEvent (unitless)\nActivity (unitless)\nStation (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nexp_id (unitless)\nIncubation (unitless)\nTreatment (unitless)\nreplicate (unitless)\nBioProject (unitless)\nBioSample (unitless)\nSRA_sample (unitless)\nPhosphate (millimoles per cubic meter (mmol m^3))\nPhosphate_flag (unitless)\nSilicate (millimoles per cubic meter (mmol m^3))\nSilicate_flag (unitless)\nNitrite (millimoles per cubic meter (mmol m^3))\nNitrite_flag (unitless)\n... (8 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_948590_v1_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_948590_v1_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_948590_v1/index.htmlTable https://www.bco-dmo.org/dataset/948590 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_948590_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_948590_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_948590_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_925050_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_925050_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_925050_v1/ public [Microbial Cellular Abundance Epifluorescent Microscopy] - Microbial cellular abundance growth response through epifluorescent microscopy from the Neuse River Estuary, North Carolina USA from 2021-2022 (Bacteria as Biosensors of Carbon and Energy Flow in Marine Ecosystems: Quantitative Links Between Substrates, Transcripts, and Metabolism) Microbial cellular abundance was enumerated for two microcosm incubation experiments to track the growth response of the microbial community. This dataset targets bacterial and phytoplankton abundance through epiflorescent microscopy. Sample water originated from the West Bay of the Neuse River Estuary, North Carolina USA in 2021 and 2022. The microcosms were 60-L, conducted in biological duplicates under three light treatment incubations: 12 h light-dark cycle of photosynthetically active radiation (PAR), 12 h light-dark cycle of UV-B radiation, or darkness. Unfiltered sample water was stained with SYBR Green I (Fall 2021 experiment) or DAPI (Spring 2022 experiment) for enumeration at 60x for bacterial and cyanobacterial abundance. Autofluorescence from excitation at 620 nm and 60x was used to enumerate small phytoplankton and cyanobacteria. This dataset highlights patterns in microbial growth across treatments over the course of the incubation and is used to generate cell-specific, normalized rates for associated datasets in the project.\n\ncdm_data_type = Other\nVARIABLES:\nExperiment_Name (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nDate (unitless)\nIncubation_Day (days)\nTreatment (unitless)\nTank_ID (unitless)\nMethod (unitless)\nStain (unitless)\nExcitation (nanometers (nm))\nMagnification (unitless)\nSize_Fraction (micrometers (um))\ncells_per_L_avg (cells L-1)\ncells_per_L_sd (cells L-1)\nratio_620_tot (unitless)\nratio_err (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_925050_v1_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_925050_v1_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_925050_v1/index.htmlTable https://www.bco-dmo.org/dataset/925050 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_925050_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_925050_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_925050_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_908626_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_908626_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_908626_v1/ public [Microbial Respiration] - Microbial respiration from microcosm experiments conducted under three light treatments using water originating from West Bay of the Neuse River Estuary, North Carolina USA in 2021 and 2022 (Bacteria as Biosensors of Carbon and Energy Flow in Marine Ecosystems: Quantitative Links Between Substrates, Transcripts, and Metabolism) Microbial respiration assays were conducted for two microcosm incubation experiments. Sample water originated from West Bay of the Neuse River Estuary, North Carolina USA in 2021 and 2022. The microcosms were 60-liters, conducted in biological duplicates under three light treatment incubations: 12-hour light-dark cycle of photosynthetically active radiation (PAR), 12-hour light-dark cycle of UV-B radiation, or darkness. Respiration assays of the unfiltered and 5-micron filtered community were initiated every few days using foil-membrane optodes to examine light effects on community respiration.\n\ncdm_data_type = Other\nVARIABLES:\nExperiment_Name (unitless)\nDate (unitless)\nTime_EDT (unitless)\nIncubation_day (days)\nTreatment (unitless)\nTank_ID (unitless)\nSize_fraction_um (micrometers (um))\nrespiration_uM_O2_d_1 (micromoles O2 per day (uM O2 d-1))\nrespiration_uM_C_d_1 (micromoles C per day (uM C d-1))\nr2 (unitless)\nRSE (unitless)\nNo_pts (unitless)\nISO_DateTime_Local (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_908626_v1/index.htmlTable https://www.bco-dmo.org/dataset/908626 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_908626_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_908626_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_908626_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_920623_v1 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_920623_v1/ public [Motility assays] - Results from motility assays carried out as part of a study investigating the role of soluble adenylyl cyclase (sAC) in sperm from the gonochoric, broadcast spawning coral Astrangia poculata (Influence of environmental pH variability and thermal sensitivity on the resilience of reef-building corals to acidification stress) Most stony corals liberate their gametes into the water column via broadcast spawning, where fertilization hinges upon the activation of directional sperm motility. Sperm from gonochoric and hermaphroditic corals display distinct morphological and molecular phenotypes, yet it is unknown whether the signallng pathways controlling sperm motility are also distinct between these sexual systems. We addressed this knowledge gap using the gonochoric, broadcast spawning coral Astrangia poculata. This dataset results from motility assays carried out to analyze sperm motility. Data are associated with Glass et al. (2023) Proceedings of the Royal Society B (10.1098/rspb.2023.0085). These data are also published in Dryad under DOI 10.5061/dryad.rn8pk0pg8.\n\ncdm_data_type = Other\nVARIABLES:\nColony (unitless)\nMedium (unitless)\nTreatment (unitless)\nStim (unitless)\nPrct_motile (unitless (percent))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_920623_v1/index.htmlTable https://www.bco-dmo.org/dataset/920623 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_920623_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_920623_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_920623_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_743072.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_743072 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_743072.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_743072/ public [NBP1608 Incubation Nutrients] - Dissolved macronutrient concentrations from incubation experiments performed on RVIB Nathaniel B. Palmer cruise NBP 16-08 from September to October 2016 (Collaborative Research: Investigating Iron-binding Ligands in Southern Ocean Diatom Communities: The Role of Diatom-Bacteria Associations) Dissolved macronutrient concentrations from incubation experiments performed on RVIB Nathaniel B. Palmer cruise NBP 16-08 from September to October 2016.\n\ncdm_data_type = Other\nVARIABLES:\nINCUBATION (unitless)\nDATE (unitless)\nDAY (unitless)\nID (unitless)\nTREATMENT (unitless)\nBTLNBR (unitless)\nNO3_NO2 (micromoles per liter (uM))\nNO3_NO2_STDEV (micromoles per liter (uM))\nNO3_NO2_pcnt_RSD (unitless (percent))\nNO3_NO2_INSTR (Mole Concentration Of Nitrate In Sea Water, unitless)\nPO4 (Mass Concentration Of Phosphate In Sea Water, micromoles per liter (uM))\nPO4_STDEV (micromoles per liter (uM))\nPO4_pcnt_RSD (unitless (percent))\nPO4_INSTR (Mass Concentration Of Phosphate In Sea Water, unitless)\nSiO4 (Si O4, micromoles per liter (uM))\nSiO4_STDEV (Si O4 STDEV, micromoles per liter (uM))\nSiO4_pcnt_RSD (Si O4 Pcnt RSD, unitless (percent))\nSiO4_INSTR (Si O4 INSTR, unitless)\nNO2 (micromoles per liter (uM))\nNO2_STDEV (micromoles per liter (uM))\nNO2_pcnt_RSD (unitless (percent))\nNO2_INSTR (unitless)\nNH4 (micromoles per liter (uM))\nNH4_STDEV (micromoles per liter (uM))\nNH4_pcnt_RSD (unitless (percent))\nNH4_INSTR (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_743072/index.htmlTable https://www.bco-dmo.org/dataset/743072 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_743072.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_743072&showErrors=false&email= BCO-DMO bcodmo_dataset_743072
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_920883_v1 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_920883_v1/ public [Nematostella ocean acidification experiment: Adult respiration] - Adult respiration after spawning following parental ocean acidification during lab experiments conducted in spring 2022. (Influence of environmental pH variability and thermal sensitivity on the resilience of reef-building corals to acidification stress) Ocean acidification (OA) resulting from anthropogenic CO2 emissions is impairing the reproduction of marine organisms. While parental exposure to OA can protect offspring via carryover effects, this phenomenon is poorly understood in many marine invertebrate taxa. We examined how parental exposure to acidified (pH 7.40) versus ambient (pH 7.72) seawater influenced reproduction and offspring performance across six gametogenic cycles (13 weeks) in the estuarine sea anemone Nematostella vectensis. This dataset pertains to the reproductive physiology of adult organisms from this study: adult respiration.\n\ncdm_data_type = Other\nVARIABLES:\nTreatment (unitless)\nSex (unitless)\nRespiration_Rate (nmol/min)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_920883_v1/index.htmlTable https://www.bco-dmo.org/dataset/920883 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_920883_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_920883_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_920883_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_923267_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_923267_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_923267_v1/ public [Nematostella ocean acidification experiment: Egg Size per Bundle] - Eggs size per bundle measurements following parental ocean acidification during lab experiments conducted in spring 2022. (Influence of environmental pH variability and thermal sensitivity on the resilience of reef-building corals to acidification stress) Ocean acidification (OA) resulting from anthropogenic CO2 emissions is impairing the reproduction of marine organisms. While parental exposure to OA can protect offspring via carryover effects, this phenomenon is poorly understood in many marine invertebrate taxa. We examined how parental exposure to acidified (pH 7.40) versus ambient (pH 7.72) seawater influenced reproduction and offspring performance across six gametogenic cycles (13 weeks) in the estuarine sea anemone Nematostella vectensis. This dataset pertains to the reproductive physiology of adult organisms from this study: egg size per bundle.\n\ncdm_data_type = Other\nVARIABLES:\nTreatment (unitless)\nDate (unitless)\nAverage_egg_size (centimeter (cm))\nNumber_of_eggs (number of egss)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_923267_v1/index.htmlTable https://www.bco-dmo.org/dataset/923267 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_923267_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_923267_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_923267_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_921037_v1 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_921037_v1/ public [Nematostella ocean acidification experiment: Egg Size] - Egg size measurements following parental ocean acidification during lab experiments conducted in spring 2022. (Influence of environmental pH variability and thermal sensitivity on the resilience of reef-building corals to acidification stress) Ocean acidification (OA) resulting from anthropogenic CO2 emissions is impairing the reproduction of marine organisms. While parental exposure to OA can protect offspring via carryover effects, this phenomenon is poorly understood in many marine invertebrate taxa. We examined how parental exposure to acidified (pH 7.40) versus ambient (pH 7.72) seawater influenced reproduction and offspring performance across six gametogenic cycles (13 weeks) in the estuarine sea anemone Nematostella vectensis. This dataset pertains to the reproductive physiology of adult organisms from this study: egg size.\n\ncdm_data_type = Other\nVARIABLES:\nTreatment (unitless)\nDate (unitless)\nEgg_Diameter (centimeters (cm))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_921037_v1/index.htmlTable https://www.bco-dmo.org/dataset/921037 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_921037_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_921037_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_921037_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_921025_v1 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_921025_v1/ public [Nematostella ocean acidification experiment: Female Fecundity] - Female fecundity following parental ocean acidification during lab experiments conducted in spring 2022. (Influence of environmental pH variability and thermal sensitivity on the resilience of reef-building corals to acidification stress) Ocean acidification (OA) resulting from anthropogenic CO2 emissions is impairing the reproduction of marine organisms. While parental exposure to OA can protect offspring via carryover effects, this phenomenon is poorly understood in many marine invertebrate taxa. We examined how parental exposure to acidified (pH 7.40) versus ambient (pH 7.72) seawater influenced reproduction and offspring performance across six gametogenic cycles (13 weeks) in the estuarine sea anemone Nematostella vectensis. This dataset pertains to the reproductive physiology of adult organisms from this study: female fecundity.\n\ncdm_data_type = Other\nVARIABLES:\nDate (unitless)\nTreatment (unitless)\nEggs_Released (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_921025_v1/index.htmlTable https://www.bco-dmo.org/dataset/921025 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_921025_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_921025_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_921025_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_920812_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_920812_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_920812_v1/ public [Nematostella ocean acidification experiment: Fertilization] - Fertilization rate of gametes following parental ocean acidification during lab experiments conducted in spring 2022. (Influence of environmental pH variability and thermal sensitivity on the resilience of reef-building corals to acidification stress) Ocean acidification (OA) resulting from anthropogenic CO2 emissions is impairing the reproduction of marine organisms. While parental exposure to OA can protect offspring via carryover effects, this phenomenon is poorly understood in many marine invertebrate taxa.  We examined how parental exposure to acidified (pH 7.40) versus ambient (pH 7.72) seawater influenced reproduction and offspring performance across six gametogenic cycles (13 weeks) in the estuarine sea anemone Nematostella vectensis. This dataset pertains to the physiology of gametes released by adults in the OA treatment, specifically the fertilization rates.\n\ncdm_data_type = Other\nVARIABLES:\nDate (unitless)\nTreatment (unitless)\nSperm_Concentration (cells/mL)\nFertilization_Success (percentage (%))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_920812_v1/index.htmlTable https://www.bco-dmo.org/dataset/920812 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_920812_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_920812_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_920812_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_920260_v1 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_920260_v1/ public [Nematostella ocean acidification experiment: Larval respiration] - Larval respiration performance of Nematostella vectensis following parental exposure to ocean acidification during lab experiments conducted in spring 2022. (Influence of environmental pH variability and thermal sensitivity on the resilience of reef-building corals to acidification stress) Ocean acidification (OA) resulting from anthropogenic CO2 emissions is impairing the reproduction of marine organisms. While parental exposure to OA can protect offspring via carryover effects, this phenomenon is poorly understood in many marine invertebrate taxa. We examined how parental exposure to acidified (pH 7.40) versus ambient (pH 7.72) seawater influenced reproduction and offspring performance across six gametogenic cycles (13 weeks) in the estuarine sea anemone Nematostella vectensis. This dataset pertains to the performance of larvae following parental exposure to ocean acidification, specifically larval respiration.\n\ncdm_data_type = Other\nVARIABLES:\nTreatment (unitless)\nDate (unitless)\nRespiration_Rate_nmol_O2_per_minute (nmol oxygen consumed per minute)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_920260_v1/index.htmlTable https://www.bco-dmo.org/dataset/920260 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_920260_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_920260_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_920260_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_923183_v1 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_923183_v1/ public [Nematostella ocean acidification experiment: Larval settlement] - Settled larvae 7 days post-fertilization following parental ocean acidification during lab experiments conducted in spring 2022. (Influence of environmental pH variability and thermal sensitivity on the resilience of reef-building corals to acidification stress) Ocean acidification (OA) resulting from anthropogenic CO2 emissions is impairing the reproduction of marine organisms. While parental exposure to OA can protect offspring via carryover effects, this phenomenon is poorly understood in many marine invertebrate taxa. We examined how parental exposure to acidified (pH 7.40) versus ambient (pH 7.72) seawater influenced reproduction and offspring performance across six gametogenic cycles (13 weeks) in the estuarine sea anemone Nematostella vectensis. This dataset pertains to the performance of larvae following parental exposure to ocean acidification, specifically larval settlement.\n\ncdm_data_type = Other\nVARIABLES:\nDate (unitless)\nTreatment (unitless)\nPercent_larvae_settled (percentage (%))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_923183_v1/index.htmlTable https://www.bco-dmo.org/dataset/923183 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_923183_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_923183_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_923183_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_920909_v1 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_920909_v1/ public [Nematostella ocean acidification experiment: Male Fecundity] - Male fecundity following parental ocean acidification during lab experiments conducted in spring 2022. (Influence of environmental pH variability and thermal sensitivity on the resilience of reef-building corals to acidification stress) Ocean acidification (OA) resulting from anthropogenic CO2 emissions is impairing the reproduction of marine organisms. While parental exposure to OA can protect offspring via carryover effects, this phenomenon is poorly understood in many marine invertebrate taxa. We examined how parental exposure to acidified (pH 7.40) versus ambient (pH 7.72) seawater influenced reproduction and offspring performance across six gametogenic cycles (13 weeks) in the estuarine sea anemone Nematostella vectensis. This dataset pertains to the reproductive physiology of adult organisms from this study: male fecundity.\n\ncdm_data_type = Other\nVARIABLES:\nTreatment (unitless)\nDate (unitless)\nSperm_Released (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_920909_v1/index.htmlTable https://www.bco-dmo.org/dataset/920909 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_920909_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_920909_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_920909_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_923171_v1 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_923171_v1/ public [Nematostella ocean acidification experiment: Planula development] - Larvae in the planula stage 3 days post-fertilization following parental ocean acidification during lab experiments conducted in spring 2022. (Influence of environmental pH variability and thermal sensitivity on the resilience of reef-building corals to acidification stress) Ocean acidification (OA) resulting from anthropogenic CO2 emissions is impairing the reproduction of marine organisms. While parental exposure to OA can protect offspring via carryover effects, this phenomenon is poorly understood in many marine invertebrate taxa. We examined how parental exposure to acidified (pH 7.40) versus ambient (pH 7.72) seawater influenced reproduction and offspring performance across six gametogenic cycles (13 weeks) in the estuarine sea anemone Nematostella vectensis. This dataset pertains to the performance of larvae following parental exposure to ocean acidification, specifically larval development.\n\ncdm_data_type = Other\nVARIABLES:\nTreatment (unitless)\nDate (unitless)\nPrct_planula (Percentage (%))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_923171_v1/index.htmlTable https://www.bco-dmo.org/dataset/923171 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_923171_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_923171_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_923171_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_920827_v1 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_920827_v1/ public [Nematostella ocean acidification experiment: Sperm MMP] - Mitochondrial membrane potential (MMP) of male gametes following parental ocean acidification during lab experiments conducted in spring 2022. (Influence of environmental pH variability and thermal sensitivity on the resilience of reef-building corals to acidification stress) Ocean acidification (OA) resulting from anthropogenic CO2 emissions is impairing the reproduction of marine organisms. While parental exposure to OA can protect offspring via carryover effects, this phenomenon is poorly understood in many marine invertebrate taxa.  We examined how parental exposure to acidified (pH 7.40) versus ambient (pH 7.72) seawater influenced reproduction and offspring performance across six gametogenic cycles (13 weeks) in the estuarine sea anemone Nematostella vectensis. This dataset pertains to the physiology of gametes released by adults in the OA treatment, specifically the mitochondrial membrane potential (MMP) of sperm.\n\ncdm_data_type = Other\nVARIABLES:\nTreatment (unitless)\nDate (unitless)\nPercent_High_Mitochondrial_Membrane_Potential (percentage (%))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_920827_v1/index.htmlTable https://www.bco-dmo.org/dataset/920827 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_920827_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_920827_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_920827_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_766334 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_766334.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_766334/ public [Nitrogen and carbon fixation rates - bulk seawater] - Nitrogen and carbon fixation rates from bulk water samples from RV/Atlantic cruise AT39-05, Feb-Mar 2018 (Collaborative Research:  Iron and phosphorus balanced limitation of nitrogen fixation in the oligotrophic ocean) Nitrogen and carbon fixation rates from bulk water samples from RV/Atlantic cruise AT39-05, Feb-Mar 2018.\n\ncdm_data_type = Other\nVARIABLES:\nStation (unitless)\nExperiment_ID (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nSample_D (unitless)\nTreatment (unitless)\nN2_fix (micromol/liter/hour (umol/l/h))\nC_fix (micromol/liter/hour (umol/l/h))\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_766334_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_766334/index.htmlTable https://www.bco-dmo.org/dataset/766334 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_766334.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_766334&showErrors=false&email= BCO-DMO bcodmo_dataset_766334
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_766354 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_766354.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_766354/ public [Nitrogen and carbon fixation rates - Trichodesmium] - Nitrogen and carbon fixation rates from Trichodesmium colonies from RV/Atlantic cruise AT39-05, Feb-Mar 2018 (Collaborative Research:  Iron and phosphorus balanced limitation of nitrogen fixation in the oligotrophic ocean) Nitrogen and carbon fixation rates from Trichodesmium colonies from RV/Atlantic cruise AT39-05, Feb-Mar 2018.\n\ncdm_data_type = Other\nVARIABLES:\nStation (unitless)\nExperiment_ID (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nSample_D (unitless)\nTreatment (unitless)\nN2_fix (micromol/liter/hour (umol/l/h))\nC_fix (micromol/liter/hour (umol/l/h))\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_766354_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_766354/index.htmlTable https://www.bco-dmo.org/dataset/766354 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_766354.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_766354&showErrors=false&email= BCO-DMO bcodmo_dataset_766354
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_735583 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_735583.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_735583/ public [OA and temp expt. - coral growth] - Net calcification, gross calcification, and linear extension rates of fragments of 4 species of coral over a 93-day ocean acidification and warming laboratory experiment (Investigating the influence of thermal history on coral growth response to recent and predicted end-of-century ocean warming across a cascade of ecological scales) This dataset includes measurements of calcification, linear extension, and surface area for four species of Caribbean reef-building corals (Siderastrea siderea, Pseudodiploria strigosa, Porites astreoides, and Undaria tenuifolia) after a 93-day ocean acidification (280-3200 \\u03bcatm) and warming (28\\u00b0C and 31\\u00b0C) experiment. Both calcification, measured using a buoyant weight method, and surface area, quantified using image processing software on photos taken of each fragment, were assess every 30 days throughout the experiment. Linear extension was quantified at the end of the experiment for total linear growth.\n\ncdm_data_type = Other\nVARIABLES:\nreefzone (unitless)\nspecies_code (unitless)\ncolony (unitless)\ncoral (unitless)\ntank (unitless)\ntreatment (unitless)\npCO2_label (P CO2 Label, unitless)\npCO2_target (P CO2 Target, micro-atmospheres)\ntemp_target (degrees Celsius)\npCO2 (P CO2, micro-atmospheres)\ntemp (Temperature, degrees Celsius)\nsurface_area (square centimeters)\nlinear_extension (millimeters/day (mm day-1))\ntime_point (unitless)\ncalc_rate (milligrams/centimeter^2/day (mg cm-2 day-1))\ncalc_gross (milligrams/centimeter^2/day (mg cm-2 day-1))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_735583/index.htmlTable https://www.bco-dmo.org/dataset/735583 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_735583.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_735583&showErrors=false&email= BCO-DMO bcodmo_dataset_735583
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_735609 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_735609.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_735609/ public [OA and temp expt. - survival] - Observed survival of coral fragments throughout a 93-day ocean acidification and warming experiment (Investigating the influence of thermal history on coral growth response to recent and predicted end-of-century ocean warming across a cascade of ecological scales) This dataset includes the observed survival of four species of Caribbean reef-building corals (Siderastrea siderea, Pseudodiploria strigosa, Porites astreoides, and Undaria tenuifolia) throughout a 93-day ocean acidification (280-3200 \\u03bcatm) and warming (28\\u00b0C and 31\\u00b0C) experiment. Survival was assessed every 30 days during the experiment. After the experiment, these data were analysed to evaluate the effects of ocean acidification and warming on the survivorship of the four corals species.\n\ncdm_data_type = Other\nVARIABLES:\ncoral (unitless)\ntreatment (unitless)\ntank (unitless)\ntemp (Temperature, degrees Celsius)\npCO2 (P CO2, micro-atmospheres)\npCO2_label (P CO2 Label, unitless)\ntemp_target (degrees Celsius)\nspecies_code (unitless)\nreefzone (unitless)\ncolony (unitless)\ntod (days)\ndead (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_735609/index.htmlTable https://www.bco-dmo.org/dataset/735609 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_735609.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_735609&showErrors=false&email= BCO-DMO bcodmo_dataset_735609
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_735629 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_735629.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_735629/ public [OA and temp expt. - water chemistry] - Measured and calculated water chemistry parameters throughout a 93-day acidification and warming experiment (Investigating the influence of thermal history on coral growth response to recent and predicted end-of-century ocean warming across a cascade of ecological scales) This water chemistry data set includes water temperature, salinity, and pH of all 24 experimental aquaria measured every other day throughout the 93-day ocean acidification and warming experiment. Additionally, the data include the measured (temperature, salinity, total alkalinity, and dissolved inorganic carbon) and calculated (Dissolved CO2, carbonate ion concentration, bicarbonate ion concentration], pCO2, aragonite saturation state, and pH) carbonate parameters from water samples taken every 10 days during the experiment. These data were used to determine the experimental conditions of each treatment that the corals were exposed to.\n\ncdm_data_type = Other\nVARIABLES:\ndate (unitless)\ntreatment (unitless)\npCO2 (P CO2, micro-atmospheres)\ntemp (Temperature, degrees Celsius)\nsal (practical salinity units (psu))\npH (Sea Water Ph Reported On Total Scale, unitless)\nalk (millimol/kilogram (mmol kg-1))\nDIC (millimol/kilogram (mmol kg-1))\npH_cal (P H Cal, unitless)\nHCO3_cal (millimol/kilogram (mmol kg-1))\nCO2_cal (millimol/kilogram (mmol kg-1))\nCO3_cal (millimol/kilogram (mmol kg-1))\nsat_cal (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_735629/index.htmlTable https://www.bco-dmo.org/dataset/735629 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_735629.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_735629&showErrors=false&email= BCO-DMO bcodmo_dataset_735629
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_924236_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_924236_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_924236_v1/ public [Ocean warming & acidification experiment: Acartia hudsonica body size] - Body size measurements collected for Acartia hudsonica during multigenerational exposure to ocean warming (OW), ocean acidification (OA), and combined ocean warming and acidification (OWA) (Collaborative Research: Response of marine copepods to warming temperature and ocean acidification) These data include body size measurements collected for Acartia hudsonica during multigenerational exposure to ocean warming (OW), ocean acidification (OA), and combined ocean warming and acidification (OWA) including a benign ambient condition temperature and CO2 control (AM). These data were collected every third generation between F0 and F4 for all treatments and at F11 for AM and OWA. Data were collected on C1 juveniles (C1), adult males (C6M), and adult females (C6F). Individual copepods were stained with non-acid lugol's solution, isolated in a drop of filtered seawater, and photographed using a Lumenera Infinity5-5 camera (Teledyne Lumenera, Ottawa, ON, CAN) attached to an inverted microscope (Olympus IX70, Olympus, Waltham, MA, USA) after the water droplet had been removed. Body size was measured as prosome length at C1 and C6 stages using Image-J (https://imagej.nih.gov/). The experimental environmental conditions were: 1) Ambient control (AM): 13˚C, 400 µatm CO2, pH = 8.2; 2) Ocean Acidification (OA): 13˚C, 1000 µatm CO2, pH = 7.85; 3) Ocean Warming (OW): 15°C, 400 μatm CO2, pH = 8.2; 4) Combined warming and acidification (OWA): 15°C, 1000 μatm CO2, pH = 7.85.\n\ncdm_data_type = Other\nVARIABLES:\nGeneration (unitless)\nTreatment (unitless)\nReplicate (unitless)\nStage (unitless)\nNumber (unitless)\nLength (millimeters (mm))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_924236_v1/index.htmlTable https://www.bco-dmo.org/dataset/924236 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_924236_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_924236_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_924236_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_924206_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_924206_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_924206_v1/ public [Ocean warming & acidification experiment: Acartia hudsonica development time] - Development (i.e. maturation) time measurements for Acartia hudsonica during multigenerational exposure to ocean warming (OW), ocean acidification (OA), and combined ocean warming and acidification (OWA) (Collaborative Research: Response of marine copepods to warming temperature and ocean acidification) These data include development (i.e. maturation) time measurements for Acartia hudsonica during multigenerational exposure to ocean warming (OW), ocean acidification (OA), and combined ocean warming and acidification (OWA) including a benign ambient condition temperature and CO2 control (AM). These data were collected every second generation between F0 and F4 for all treatments and at F11 for AM and OWA. Data were calculated for naupliar development time (i.e. naupliar stage 1 to naupliar stage 6) and copepodite development time (i.e. copepodite stage 1 to adulthood). The experimental environmental conditions were: 1) Ambient control (AM): 13˚C, 400 µatm CO2, pH = 8.2; 2) Ocean Acidification (OA): 13˚C, 1000 µatm CO2, pH = 7.85; 3) Ocean Warming (OW): 15°C, 400 μatm CO2, pH = 8.2; 4) Combined warming and acidification (OWA): 15°C, 1000 μatm CO2, pH = 7.85.\n\ncdm_data_type = Other\nVARIABLES:\nTreatment (unitless)\nTemp (degrees Celsius)\npH (pH units)\nRep (unitless)\nBeak (unitless)\ntime_elapsed (Time, days post hatch)\nnx (number of individuals)\nlx (number of individuals)\nNdev (number of individuals)\nCdev (number of individuals)\nF_Ratio (females per total individuals)\nM_Ratio (males per total individuals)\nGeneration (unitless)\nGeneration_c (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_924206_v1/index.htmlTable https://www.bco-dmo.org/dataset/924206 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_924206_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_924206_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_924206_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_924126_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_924126_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_924126_v1/ public [Ocean warming & acidification experiment: Acartia hudsonica egg production and hatching success] - Egg production rate (EPR) and egg hatching success (HS) data for Acartia tonsa during multigenerational exposure to ocean warming (OW), ocean acidification (OA), and combined ocean warming and acidification (OWA) (Collaborative Research: Response of marine copepods to warming temperature and ocean acidification) These data include egg production rate (EPR) and egg hatching success (HS) data for Acartia tonsa during multigenerational exposure to ocean warming (OW), ocean acidification (OA), and combined ocean warming and acidification (OWA) including a benign ambient condition temperature and CO2 control (AM). These data were collected every second generation between F0 and F4 for all treatments and at F11 for AM and OWA. Data was collected as the number of eggs produced and hatched offspring per female per treatment at each generation.\n\ncdm_data_type = Other\nVARIABLES:\nGeneration (unitless)\nNumber (unitless)\nTreatment (unitless)\nTemp (degrees Celsius)\npH (pH units)\nEPRtot (eggs per female per day)\nHftot (nauplii per egg laid)\nGeneration_c (unitless)\nRep (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_924126_v1/index.htmlTable https://www.bco-dmo.org/dataset/924126 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_924126_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_924126_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_924126_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_923960_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_923960_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_923960_v1/ public [Ocean warming & acidification experiment: Acartia hudsonica population fitness] - Population fitness measurements collected for Acartia hudsonica during multigenerational exposure to ocean warming (OW), ocean acidification (OA), and combined ocean warming and acidification (OWA) (Collaborative Research: Response of marine copepods to warming temperature and ocean acidification) These data include population fitness measurements collected for Acartia hudsonica during multigenerational exposure to ocean warming (OW), ocean acidification (OA), and combined ocean warming and acidification (OWA) including a benign ambient condition temperature and CO2 control (AM).\n\ncdm_data_type = Other\nVARIABLES:\nGeneration (unitless)\nTreatment (unitless)\nRep (unitless)\nlambda (per generation)\nsurv (unitless)\nepr (eggs per female per day)\nhf (nauplii per number of eggs laid)\nsex (females per total copepods)\ndev_time (days to adulthood)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_923960_v1/index.htmlTable https://www.bco-dmo.org/dataset/923960 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_923960_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_923960_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_923960_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_924088_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_924088_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_924088_v1/ public [Ocean warming & acidification experiment: Acartia hudsonica survival] - Survivorship measurements collected for Acartia hudsonica during multigenerational exposure to ocean warming (OW), ocean acidification (OA), and combined ocean warming and acidification (OWA) (Collaborative Research: Response of marine copepods to warming temperature and ocean acidification) These data include survivorship measurements collected for Acartia hudsonica during multigenerational exposure to ocean warming (OW), ocean acidification (OA), and combined ocean warming and acidification (OWA) including a benign ambient condition temperature and CO2 control (AM). These data were collected every second generation between F0 and F4 for all treatments and F11 for AM and OWA. Data were collected as the proportion of surviving individuals on any day (x) relative to the starting number of individuals for a single experiment.\n\ncdm_data_type = Other\nVARIABLES:\nGeneration (unitless)\nTreatment (unitless)\nTemp (degrees Celsius)\npH (pH units)\nRep (unitless)\nBeak (unitless)\ntime_elapsed (Time, days)\nnx (number of individuals)\nlx (unitless)\nNdev (number of individuals)\nCdev (number of individuals)\nF_Ratio (females per total individuals)\nM_Ratio (males per total individuals)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_924088_v1/index.htmlTable https://www.bco-dmo.org/dataset/924088 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_924088_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_924088_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_924088_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_906342_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_906342_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_906342_v1/ public [Ocean warming & acidification experiment: Acartia tonsa body size] - Acartia tonsa body size data for transgenerational ocean warming and acidification experiments (Collaborative Research: Response of marine copepods to warming temperature and ocean acidification) These data include body size measurements collected for Acartia tonsa during multigenerational exposure to ocean warming (OW), ocean acidification (OA), and combined ocean warming and acidification (OWA) including a benign ambient condition temperature and CO2 control (AM). These data were collected every third generation between F0 and F15 and at F25 for all treatments. Data was collected on C1 juveniles (C1), adult males (C6M), and adult females (C6F). Individual copepods were stained with non-acid lugol's solution, isolated in a drop of filtered seawater, and photographed using a Lumenera Infinity5-5 camera (Teledyne Lumenera, Ottawa, ON, CAN) attached to an inverted microscope (Olympus IX70, Olympus, Waltham, MA, USA) after the water droplet had been removed. Body size was measured as prosome length at C1 and C6 stages using Image-J (https://imagej.nih.gov/ij/).\n\ncdm_data_type = Other\nVARIABLES:\nTreatment (unitless)\nLength (millimeter (mm))\nTemp (degrees Celsius(°C))\npH (unitless)\nGeneration (unitless)\nStage (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_906342_v1/index.htmlTable https://www.bco-dmo.org/dataset/906342 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_906342_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_906342_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_906342_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_906780_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_906780_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_906780_v1/ public [Ocean warming & acidification experiment: Acartia tonsa egg production and hatching success] - Acartia tonsa egg production rate and egg hatching success for transgenerational exposure to ocean warming and ocean acidification (Collaborative Research: Response of marine copepods to warming temperature and ocean acidification) These data include egg production rate (EPR) and egg hatching success (HS) data for Acartia tonsa during multigenerational exposure to ocean warming (OW), ocean acidification (OA), and combined ocean warming and acidification (OWA) including a benign ambient condition temperature and CO2 control (AM). These data were collected every third generation between F0 and F15 and at F25 for all treatments. Data was collected as the number of eggs produced and hatched offspring per female per treatment at each generation.\n\ncdm_data_type = Other\nVARIABLES:\nGeneration (unitless)\nRep (unitless)\nTreatment (unitless)\nTemp (degrees Celsius (°C))\npH (unitless)\nHatched (unitless)\nUnhatched (unitless)\nTotal (unitless)\nEPRtot (unitless)\nHFtot (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_906780_v1/index.htmlTable https://www.bco-dmo.org/dataset/906780 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_906780_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_906780_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_906780_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_923908_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_923908_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_923908_v1/ public [Ocean warming & acidification experiment: Acartia tonsa population fitness] - Population fitness measurements collected for Acartia tonsa during multigenerational exposure to ocean warming (OW), ocean acidification (OA), and combined ocean warming and acidification (OWA) (Collaborative Research: Response of marine copepods to warming temperature and ocean acidification) These data include population fitness measurements collected for Acartia tonsa during multigenerational exposure to ocean warming (OW), ocean acidification (OA), and combined ocean warming and acidification (OWA) including a benign ambient condition temperature and CO2 control (AM). These data were estimated as the population net reproductive rate collected every third generation between F0 and F15 and at F25 for all treatments. These data were estimated via age-structured leslie matrices using the existing survival, fecundity (egg production and hatching success), development time, and sex ratio data for this experiment.\n\ncdm_data_type = Other\nVARIABLES:\nGeneration (unitless)\nTreatment (unitless)\nRep (unitless)\nlambda (per generation)\nsurv (unitless)\nepr (eggs per female per day)\nhf (nauplii per number of eggs laid)\nsex (females per total copepods)\ndev_time (days to adulthood)\nlambda_stand (unitless)\nsurv_stand (unitless)\nepr_stand (unitless)\nhf_stand (unitless)\nsex_stand (unitless)\ndev_stand (unitless)\nlambda_rel (unitless)\nsurv_rel (unitless)\nepr_rel (unitless)\nhf_rel (unitless)\nsex_rel (unitless)\ndev_rel (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_923908_v1/index.htmlTable https://www.bco-dmo.org/dataset/923908 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_923908_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_923908_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_923908_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_955729_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_955729_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_955729_v1/ public [Ontogenetic patterns in respiration rate in Acartia tonsa] - Individual respiration rate measurements for developmental stages of Acartia tonsa during temperature experiments with copepods collected from eastern Long Island Sound in July of 2021 (Linking eco-evolutionary dynamics of thermal adaptation and grazing in copepods from highly seasonal environments) The data contain individual respiration rate measurements for developmental stages of Acartia tonsa, collected from eastern Long Island Sound in July 2021. Individuals were exposed to either ambient or increased temperature as nauplii, and then tracked through development. At each developmental stage, respiration rate was measured for the individual using a PreSens respirometer. High resolution data on individual respiration rates through development are crucial for understanding how climate change may impact ecological and biogeochemical dynamics in aquatic systems. Data were collected by Mathew Holmes-Hackerd and Dr. Matthew Sasaki at the University of Connecticut.\n\ncdm_data_type = Other\nVARIABLES:\nexperiment_date (unitless)\nexperiment_day (unitless)\nexperiment_month (unitless)\nexperiment_year (unitless)\nreplicate (unitless)\nindividual (unitless)\nstage (unitless)\nvial (unitless)\nresp_rate (milligrams Oxygen consumed per hour (mg O2/hr))\nprosome_length (millimeters (mm))\ntreatment (unitless)\ngroup (unitless)\nsex (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_955729_v1/index.htmlTable https://osprey.bco-dmo.org/dataset/955729 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_955729_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_955729_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_955729_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_808280 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_808280.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_808280/ public [Organic polymers and domoic acid] - Organic polymer formation and domoic acid adsorption from experiments conducted using water samples collected in northern Gulf of Mexico in 2018 and 2019 (The biotic and abiotic controls on the Silicon cycle in the northern Gulf of Mexico) Organic polymer formation and domoic acid adsorption. Results from lab experiments designed to investigate organic polymer formation and domoic acid adsorption.  Water samples were collected in the northern Gulf of Mexico in 2018 and 2019.\n\ncdm_data_type = Other\nVARIABLES:\ntime (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)\nlatitude (degrees_north)\nlongitude (degrees_east)\nDate (unitless)\ntime2 (Time, unitless)\nExperiment (unitless)\nTreatment (unitless)\nReplicate_bottle (unitless)\nReplicate_subsample (unitless)\nPOC_mass (micrograms (µg))\npDA_OP_mass (P DA OP Mass, nanograms (ng))\nPOC_tox (parts per million (ppm))\nDA_to_C (dimensionless)\nPOC_conc (micrograms (µg) per liter (L))\npDA_conc (P DA Conc, nanograms (ng) per liter (L))\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_808280_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_808280/index.htmlTable https://www.bco-dmo.org/dataset/808280 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_808280.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_808280&showErrors=false&email= BCO-DMO bcodmo_dataset_808280
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_650324.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_650324 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_650324.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_650324/ public [Oxygen Consumption Rates of Iron Oxidizing Bacteria - FeOB] - Laboratory experiment data describing oxygen consumption of two strains of Mariprofundus ferrooxydans at two oxygen concentrations and one temperature (Sedimentary Iron Cycle project) (Collaborative Research: The Role of Iron-oxidizing Bacteria in the Sedimentary Iron Cycle: Ecological, Physiological and Biogeochemical Implications) Laboratory experiment data describing oxygen consumption of two strains of Mariprofundus ferrooxydans at two oxygen concentrations and one temperature (Sedimentary Iron Cycle project)\n\ncdm_data_type = Other\nVARIABLES:\nFeOB_strain (Fe OB Strain, unitless)\ntemp (Temperature, degrees celsius)\nO2_conc (micromoles per liter)\ntreatment (unitless)\ndate_local (unitless)\ntime_local (unitless)\nO2_consume (micromoles per liter)\nyrday_local (decimal day)\ntime (ISO Date Time Local, seconds since 1970-01-01T00:00:00Z)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_650324/index.htmlTable https://www.bco-dmo.org/dataset/650324 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_650324.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_650324&showErrors=false&email= BCO-DMO bcodmo_dataset_650324
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_709573 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_709573.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_709573/ public [Oxygen consumption rates] - Oxygen consumption rates/zero valent iron dissolution of FeOB with kanamycin addition - replacement samples (Collaborative Research: The Role of Iron-oxidizing Bacteria in the Sedimentary Iron Cycle: Ecological, Physiological and Biogeochemical Implications) Oxygen consumption rates/zero valent iron dissolution of FeOB with kanamycin addition - replacement samples\n\ncdm_data_type = Other\nVARIABLES:\nvial (unitless)\ndate (unitless)\ntime2 (Time, unitless)\ntreatment (unitless)\ntime_elapsed (minutes)\noxygen_concentration (umol/L)\ntime (ISO Date Time UTC, seconds since 1970-01-01T00:00:00Z)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_709573/index.htmlTable https://www.bco-dmo.org/dataset/709573 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_709573.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_709573&showErrors=false&email= BCO-DMO bcodmo_dataset_709573
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_906949_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_906949_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_906949_v1/ public [P. australis physiological data (Cluster experiments)] - Cluster (combined temperature, nutrient concentration, and CO2) results from laboratory experiments with Pseudo-nitzschia australis conducted from 2021 to 2022 (MCA: Developing transcriptomics as a tool to investigate toxic diatom responses to ocean heatwave and upwelling events) These raw data contain physiological data collected from laboratory experiments with Pseudo-nitzschia australis.  This dataset includes results of cluster experiments of combined temperature, nutrient concentration, and CO2 in order to reflect upwelling, heatwaves, and extreme heatwaves in the natural environment. \n\nSee \"Related Datasets\" for other physiological measurements published as part of these experiments. See the results publication Kelley et al. (2003) for more detail.  The following description provides details for all related physiological measurement datasets.\n\nThese physiological measurements include: growth rates, domoic acid quotas, domoic acid production rates, net primary productivity, and nitrogen use efficiencies. Also included are pH and DIC measurement used to characterize the carbonate system. \n\nThese data revealed novel insights into P. australis bloom dynamics and may be useful to harmful algal bloom modelers and were collected and analyzed by Kyla Kelly, Amjad Mansour, Chen Liang, Andrew Kim, Lily Mancini, Dr. Matthew Bertin, Dr. Bethany Jenkins, Dr. David Hutchins, and Dr. Fei-Xue Fu.\n\ncdm_data_type = Other\nVARIABLES:\nTreatment (unitless)\nReplicate (unitless)\nGrowth_rate (per day (d-1))\nParticulate_DA_perC (nanograms of domoic acid per micromole of carbon (ng DA/umol C))\nParticulate_DA_perCell (nanograms of domoic acid per cell (ng DA/cell))\nDA_production_rate (nanograms of domoic acid per micromole of carbon per day (ng DA/umol C/day))\nNet_primary_productivity (per hour (h-1))\nNitrogen_use_efficiency (micromoles of carbon per micromoles of nitrogen per hour (umol C/umol N/hr))\nMeasured_DIC (miromoles per kilogram (umol/kg))\nMeasured_pH (total pH scale)\nCalculated_bulk_alkalinity (miromoles per kilogram (umol/kg))\nCalculated_pCO2 (microatmospheres (uatm))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_906949_v1/index.htmlTable https://www.bco-dmo.org/dataset/906949 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_906949_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_906949_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_906949_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_906938_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_906938_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_906938_v1/ public [P. australis physiological data (CO2 experiments)] - CO2 experiment physiology and carbonate chemistry from laboratory experiments with Pseudo-nitzschia australis conducted from 2021 to 2022 (MCA: Developing transcriptomics as a tool to investigate toxic diatom responses to ocean heatwave and upwelling events) These raw data contain physiological data collected from laboratory experiments with Pseudo-nitzschia australis.  This dataset includes replicate data for CO2 experiment physiology and carbonate chemistry.\n\nSee \"Related Datasets\" for other physiological measurements published as part of these experiments. See the results publication Kelley et al. (2003) for more detail.  The following description provides details for all related physiological measurement datasets.\n\nThese physiological measurements include: growth rates, domoic acid quotas, domoic acid production rates, net primary productivity, and nitrogen use efficiencies. Also included are pH and DIC measurement used to characterize the carbonate system. \n\nThese data revealed novel insights into P. australis bloom dynamics and may be useful to harmful algal bloom modelers and were collected and analyzed by Kyla Kelly, Amjad Mansour, Chen Liang, Andrew Kim, Lily Mancini, Dr. Matthew Bertin, Dr. Bethany Jenkins, Dr. David Hutchins, and Dr. Fei-Xue Fu.\n\ncdm_data_type = Other\nVARIABLES:\nTreatment (unitless)\nReplicate (unitless)\nGrowth_rate (per day (d-1))\nParticulate_DA (nanograms of domoic acid per micromole of carbon (ng DA/umol C))\nDA_production_rate (nanograms of domoic acid per micromole of carbon per day (ng DA/umol C/day))\nMeasured_DIC (miromoles per kilogram (umol/kg))\nMeasured_pH (total pH scale)\nCalculated_bulk_alkalinity (miromoles per kilogram (umol/kg))\nCalculated_pCO2 (microatmospheres (uatm))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_906938_v1/index.htmlTable https://www.bco-dmo.org/dataset/906938 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_906938_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_906938_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_906938_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_906858_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_906858_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_906858_v1/ public [P. australis physiological data (N:P ratio experiments)] - N:P ratio data from laboratory experiments with Pseudo-nitzschia australis (MCA: Developing transcriptomics as a tool to investigate toxic diatom responses to ocean heatwave and upwelling events) These raw data contain physiological data collected from laboratory experiments with Pseudo-nitzschia australis.  This dataset includes N:P ratio data from these experiments. \n\nIn this 3x2 matrix experiment, we compared each N:P ratio (5, 10, and 50), temperature (13 and 19°C), and total nutrient concentration (high and low) at every combination.\n\nSee \"Related Datasets\" for other physiological measurements published as part of these experiments. See the results publication Kelley et al. (2023) for more detail.  The following description provides details for all related physiological measurement datasets.\n\nThese physiological measurements include: growth rates, domoic acid quotas, domoic acid production rates, net primary productivity, and nitrogen use efficiencies. Also included are pH and DIC measurement used to characterize the carbonate system. \n\nThese data revealed novel insights into P. australis bloom dynamics and may be useful to harmful algal bloom modelers and were collected and analyzed by Kyla Kelly, Amjad Mansour, Chen Liang, Andrew Kim, Lily Mancini, Dr. Matthew Bertin, Dr. Bethany Jenkins, Dr. David Hutchins, and Dr. Fei-Xue Fu.\n\ncdm_data_type = Other\nVARIABLES:\nTreatment (unitless)\nReplicate (unitless)\nGrowth_rate (per day (d-1))\nParticulate_domoic_acid (nanograms of domoic acid per micromole of carbon (ng DA/umol C))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_906858_v1/index.htmlTable https://www.bco-dmo.org/dataset/906858 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_906858_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_906858_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_906858_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_906927_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_906927_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_906927_v1/ public [P. australis physiological data (temperature experiments)] - Single-factor temperature experiment physiology and carbonate chemistry from laboratory experiments with Pseudo-nitzschia australis conducted from 2021 to 2022 (MCA: Developing transcriptomics as a tool to investigate toxic diatom responses to ocean heatwave and upwelling events) These raw data contain physiological data collected from laboratory experiments with Pseudo-nitzschia australis.  This dataset includes replicate data for single-factor temperature experiment physiology and carbonate chemistry.\n\nSee \"Related Datasets\" for other physiological measurements published as part of these experiments. See the results publication Kelley et al. (2003) for more detail.  The following description provides details for all related physiological measurement datasets.\n\nThese physiological measurements include: growth rates, domoic acid quotas, domoic acid production rates, net primary productivity, and nitrogen use efficiencies. Also included are pH and DIC measurement used to characterize the carbonate system. \n\nThese data revealed novel insights into P. australis bloom dynamics and may be useful to harmful algal bloom modelers and were collected and analyzed by Kyla Kelly, Amjad Mansour, Chen Liang, Andrew Kim, Lily Mancini, Dr. Matthew Bertin, Dr. Bethany Jenkins, Dr. David Hutchins, and Dr. Fei-Xue Fu.\n\ncdm_data_type = Other\nVARIABLES:\nTreatment (degrees Celsius (deg C))\nReplicate (unitless)\nGrowth_rate (per day (d-1))\nParticulate_DA (nanograms of domoic acid per micromole of carbon (ng DA/umol C))\nDA_production_rate (nanograms of domoic acid per micromole of carbon per day (ng DA/umol C/day))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_906927_v1/index.htmlTable https://www.bco-dmo.org/dataset/906927 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_906927_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_906927_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_906927_v1
log in [Palau Coral Reef Experiment 2018:  Pulse Amplitude Modulation (PAM) fluorometry] - Coral pulse amplitude modulation (PAM) fluorometry data from a heating experiment using samples collected from Nikko Bay and Rebotel Reef in Palau in the spring of 2018 (Collaborative Research: Stability, flexibility, and functionality of thermally tolerant coral symbioses) Coral reefs surrounding Palau, Micronesia are living within a broad range of thermal habitats. Specifically, corals living on the offshore barrier reefs surrounding Palau reside in waters with low temperature variability compared to the much warmer and more acidic waters of near shore environments surrounding the Rock Island habitats. \n\nThis study was designed to test the differences in thermal physiology among two species of reef corals that reside at both of these locations. Specifically, we examined how short-term elevated temperature influences  the photochemistry of each coral species from each location before and after heating, as measured by active chlorophyll fluorescence recorded by pulse amplitude modulation (PAM) fluorometry.\n\ncdm_data_type = Other\nVARIABLES:\nLocation_Name (unitless)\nlongitude (degrees_east)\nlatitude (degrees_north)\nSpecies (unitless)\nDate (unitless)\nDay (unitless)\nTreatment (unitless)\nLocation (unitless)\nColony (unitless)\nFrag (unitless)\nSymbiont (unitless)\nFq_Fm (unitless)\nFv_Fm (unitless)\nQm (unitless)\n BCO-DMO bcodmo_dataset_855054_v1
log in [Palau Coral Reef Experiment 2018: Biometrics] - Coral biometrics data from a heating experiment using samples collected from Nikko Bay and Rebotel Reef in Palau in the spring of 2018 (Collaborative Research: Stability, flexibility, and functionality of thermally tolerant coral symbioses) Using samples collected from Nikko Bay and Rebotel Reef in Palau in the spring of 2018, this dataset examines coral physiology of two species of coral, Psammacora digitata and Pocillopora verrucosa, as part of a short-term heating experiment.\n\ncdm_data_type = Other\nVARIABLES:\nLocation_Name (unitless)\nlongitude (degrees_east)\nlatitude (degrees_north)\nSpecies (unitless)\nLSID (units)\nDate (unitless)\nDay (unitless)\nSymbiont (unitless)\nTreatment (Degrees Celcius (°C))\nColony (unitless)\nCell_Density (number of cells per square centimeter of coral)\nChl_a (picograms chlorophyll a per algal cell)\nHost_protein (micrograms soluble protein per square centimeter of coral skeleton)\nGross_photosynthesis (micrograms of oxygen per algal cell per hour)\nRespiration (milligrams oxygen per milligrams animal protein per hour)\nPhotosynthesis_Respiration (unitless)\n BCO-DMO bcodmo_dataset_855036_v1
log in [Palau Coral Reef Experiment 2018: Isotopes] - Coral Isotope data from a heating experiment using samples collected from Nikko Bay and Rebotel Reef in Palau in the spring of 2018 (Collaborative Research: Stability, flexibility, and functionality of thermally tolerant coral symbioses) Coral reefs surrounding Palau, Micronesia are living within a broad range of thermal habitats. Specifically, corals living on the offshore barrier reefs surrounding Palau reside in waters with low temperature variability compared to the much warmer and more acidic waters of near shore environments surrounding the Rock Island habitats. \n\nThis study was designed to test the differences in thermal physiology among two species of reef corals that reside at both of these locations. Specifically, we examined how short-term elevated temperature influences  the uptake and assimilation of carbon and nitrogen isotopes into the symbiotic algae, the coral tissue, and the coral skeleton among these two coral species.\n\ncdm_data_type = Other\nVARIABLES:\nLocation_Name (unitless)\nlongitude (degrees_east)\nlatitude (degrees_north)\nSpecies (unitless)\nSym (unitless)\nTreatment (unitless)\nDate (unitless)\nDay (unitless)\nColony (unitless)\na_13catom (percent (%))\nh_13catom (percent (%))\ns_13catom (percent (%))\na_15natom (percent (%))\nh_15natom (percent (%))\n BCO-DMO bcodmo_dataset_948025_v1
log in [Particle Flux] - Sediment trap flux measurements for the Hawaii Ocean Time-Series (HOT) project from December 1988 to November 2021 at Station ALOHA ([Current] Hawaii Ocean Time-series (HOT): 2018-2023;  [Previous] Hawaii Ocean Time-series (HOT): Sustaining ocean ecosystem and climate observations in the North Pacific Subtropical Gyre) Particle flux measurements from the Hawaii Ocean Time-Series (HOT). Particle flux was measured at a standard reference depth of 150 meters using multiple cylindrical particle interceptor traps deployed on a free-floating array for approximately 60 hours during each cruise. Sediment trap design and collection methods are described in Winn et al. (1991). Samples were analyzed for particulate carbon, nitrogen, phosphorus, and silica. Typically six traps are analyzed for particulate carbon and particulate nitrogen, three for particulate phosphorus, and another three traps for particulate silica.\n\ncdm_data_type = Other\nVARIABLES:\nCruise (unitless)\nLatitude (degrees_north)\nlongitude (degrees_east)\nStart_ISO_DateTime_UTC (unitless)\nEnd_ISO_DateTime_UTC (unitless)\ndepth (m)\nTreatment (unitless)\nCarbon_flux (milligrams per square meter per day (mg/m^2/d))\nCarbon_sd_diff (milligrams per square meter per day (mg/m^2/d))\nCarbon_numreps (unitless)\nNitrogen_flux (milligrams per square meter per day (mg/m^2/d))\nNitrogen_sd_diff (milligrams per square meter per day (mg/m^2/d))\nNitrogen_numreps (unitless)\nPhosphorus_flux (milligrams per square meter per day (mg/m^2/d))\nPhosphorus_sd_diff (milligrams per square meter per day (mg/m^2/d))\nPhosphorus_numreps (unitless)\nMass_flux (milligrams per square meter per day (mg/m^2/d))\nMass_sd_diff (milligrams per square meter per day (mg/m^2/d))\nMass_numreps (unitless)\nSilica_flux (milligrams per square meter per day (mg/m^2/d))\nSilica_sd_diff (milligrams per square meter per day (mg/m^2/d))\n... (11 more variables)\n BCO-DMO bcodmo_dataset_737393_v2
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_737393.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_737393 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_737393.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_737393/ public [Particle Flux] - Sediment trap flux measurements from the Hawaii Ocean Time-Series (HOT) project at station ALOHA ([Current] Hawaii Ocean Time-series (HOT): 2018-2023;  [Previous] Hawaii Ocean Time-series (HOT): Sustaining ocean ecosystem and climate observations in the North Pacific Subtropical Gyre) Particle flux measurements from the Hawaii Ocean Time-Series (HOT). Particle flux was measured at a standard reference depth of 150 m using multiple cylindrical particle interceptor traps deployed on a free-floating array for approximately 60 h during each cruise. Sediment trap design and collection methods are described in Winn et al. (1991). Samples were analyzed for particulate C, N, P & Si. Typically six traps are analyzed for PC and PN, three for PP, and another three traps for PSi.\n\ncdm_data_type = Other\nVARIABLES:\nCruise (unitless)\nP_flux_filename (unitless)\nlongitude (degrees_east)\nlatitude (degrees_north)\ndepth (m)\nTreatment (unitless)\nCarbon (miligrams per square meter per day (mg/m2/d))\nCarbon_sd_diff (miligrams per square meter per day (mg/m2/d))\nCarbon_n (unitless)\nNitrogen (miligrams per square meter per day (mg/m2/d))\nNitrogen_sd_diff (miligrams per square meter per day (mg/m2/d))\nNitrogen_n (unitless)\nPhosphorus (miligrams per square meter per day (mg/m2/d))\nPhosphorus_sd_diff (miligrams per square meter per day (mg/m2/d))\nPhosphorus_n (unitless)\nMass (miligrams per square meter per day (mg/m2/d))\nMass_sd_diff (miligrams per square meter per day (mg/m2/d))\nMass_n (unitless)\nSilica (miligrams per square meter per day (mg/m2/d))\nSilica_sd_diff (miligrams per square meter per day (mg/m2/d))\nSilica_n (unitless)\nDelta_15N (Delta 15 N, permil vs. air-N2)\n... (8 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_737393_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_737393/index.htmlTable https://www.bco-dmo.org/dataset/737393 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_737393.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_737393&showErrors=false&email= BCO-DMO bcodmo_dataset_737393
log in [Particulate metals from the scandium incubation experiment on PUPCYCLE I in the California Current System in 2019] - Particulate metals from a scandium incubation experiment during the PUPCYCLE I R/V Oceanus cruise 1905B in the California Current System in 2019 (CAREER: An integrated molecular and physiological approach to examining the dynamics of upwelled phytoplankton in current and changing oceans) We performed an incubation experiment with added dissolved scandium and/or iron in waters sampled in the California Current System during the PUPCYCLE I cruise in 2019 with Chief Scientist Adrian Marchetti. PUPCYCLE I (Phytoplankton response to the UPwelling CYCLE) took place in summer 2019 onboard the R/V Oceanus (OC 1905b). Water for the incubation was collected from 15 m just off the Big Sur coast 2 June 2019. This was in a region with an extremely narrow shelf. There were five total treatments run in triplicate: control (no addition), +5 nmol/kg dissolved Fe, +5 nmol/kg dissolved Sc, +5 nmol/kg dissolved Fe and +5 nmol/kg dissolved Sc, and filtered seawater with +5 nmol/kg dissolved Fe and +5 nmol/kg dissolved Sc. After 24 hours incubating, the incubation was harvested and analyzed for chlorophyll, nutrients, and dissolved and particulate Fe and Sc concentrations. The effort was to investigate similarities and differences in the oceanic chemical cycling of Fe and Sc.\n\ncdm_data_type = Other\nVARIABLES:\nLabel (unitless)\nTimepoint (hours)\nTreatment (unitless)\nReplicate (unitless)\nleachable_particulate_Fe (nanomoles per kilogram (nmol/kg))\nleachable_particulate_Sc (picomoles per kilogram (pmol/kg))\n BCO-DMO bcodmo_dataset_940088_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_918518_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_918518_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_918518_v1/ public [Percent cover measure of mussel bed succession on rocky shores due to intra-population variation in dogwhelk drilling] - Percent cover measure of mussel bed succession on rocky shores due to intra-population variation in dogwhelk drilling (Coastal mosaics of local adaptation and the eco-evolutionary dynamics of a marine predator-prey interaction) Despite growing interest of eco-evolutionary dynamics, there have been few experiments that test the importance of these feedbacks in natural ecosystems at the community level. A selection experiment on intra-population variation in dogwhelk (Nucella canaliculata) drilling was performed in the laboratory. Dogwhelks were given one of four early-life diet treatments (thin-shelled Mytilus trossulus mussels, two treatments of M. californianus from two populations known to differ in shell thickness, and acorn barnacles) for the first 3 months of life. Surviving adult dogwhelks were outplanted to field cages at Bodega Marine Reserve to test the ecological consequences of divergent phenotypes. Mussel bed succession was quantified by percent cover of sessile organisms in the plots over the course of approximately one year.\n\ncdm_data_type = Other\nVARIABLES:\nBlock (unitless)\nPlot_Number (unitless)\nFamily (unitless)\nSite_Latitude (degrees_north)\nlongitude (Site_longitude, degrees_east)\nTreatment (unitless)\nFamily_x_Treatment (unitless)\nDate (unitless)\nCheck (unitless)\nBare_Rock (percent (%))\nAcorn_Barnacles (percent (%))\nMussels (percent (%))\nGooseneck_Barnacles (percent (%))\nOther_Sessile_Animals (percent (%))\nCoralline_Algae (percent (%))\nAlgae_and_Surfgrass (percent (%))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_918518_v1/index.htmlTable https://www.bco-dmo.org/dataset/918518 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_918518_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_918518_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_918518_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_914002_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_914002_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_914002_v1/ public [Phenotypic plasticity of the ciliated band of early echinoderm larvae] - Phenotypic plasticity of the ciliated band of seven species of echinoderm larvae, collected between 2020 and 2022 in the laboratory at California State University, Long Beach. (RUI: Effects of large inedible particles on larval feeding, planktonic larval duration, and juvenile quality in marine invertebrates) This experiment assesses phenotypic plasticity of the ciliated band. This dataset contains estimates of the ciliated band generated by both direct measurement and by tracing of the band for non-pluteus larvae, used in evaluation of tracing as a proxy for direct measurement. The data was collected between 2020 and 2022 in the laboratory at California State University, Long Beach.\n\ncdm_data_type = Other\nVARIABLES:\nForm (unitless)\nSpecies (unitless)\nAge (days)\nDev (unitless)\nTreatment (unitless)\nFamily (unitless)\nLarva (unitless)\ncbl (mm)\nbl (mm)\nsl (mm)\nsw (mm)\nsgmean (mm)\nmpo (mm)\npo1 (mm)\npo2 (mm)\nmouth (mm)\ntrace1 (mm)\ntrace2 (mm)\ntrace_full (mm)\ngeospatial_bound_N (degrees_north)\ngeospatial_bound_S (degrees_north)\ngeospatial_bound_E (degrees_east)\ngeospatial_bound_W (degrees_east)\nexperiment_location_lat (degrees_north)\nexperiment_location_long (degrees_east)\nexperiment_start (unitless)\nexperiment_end (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_914002_v1/index.htmlTable https://www.bco-dmo.org/dataset/914002 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_914002_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_914002_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_914002_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_750823 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_750823.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_750823/ public [Pmin strain feeding 2] - Data from an experiment that measured the occurrence of feeding among 8 Prorocentrum minimum strains on fluorescently labeled bacteria or the cryptophyte Teleaulax amphioxeia (Exploring the physiological and ecological basis of mixotrophy in marine food webs) This dataset contains data from an experiment that measured the occurrence of feeding among 8 Prorocentrum minimum strains on fluorescently labeled bacteria or the cryptophyte Teleaulax amphioxeia.\n\ncdm_data_type = Other\nVARIABLES:\nPrey (unitless)\nStrain (unitless)\ntreatment (unitless)\nrep (unitless)\ncells (unitless)\ncells_feeding (unitless)\npcnt_cells_feeding (unitless)\nGFI (unitless)\nGFI_per_cell (unitless)\nOFI (unitless)\nOFI_per_cell (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_750823/index.htmlTable https://www.bco-dmo.org/dataset/750823 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_750823.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_750823&showErrors=false&email= BCO-DMO bcodmo_dataset_750823
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_766374 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_766374.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_766374/ public [POC and PON - bulk seawater] - POC and PON from bulk seawater samples from RV/Atlantic cruise AT39-05, Feb-Mar 2018 (Collaborative Research:  Iron and phosphorus balanced limitation of nitrogen fixation in the oligotrophic ocean) POC and PON from bulk seawater samples from RV/Atlantic cruise AT39-05, Feb-Mar 2018.\n\ncdm_data_type = Other\nVARIABLES:\nStation (unitless)\nExperiment_ID (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nSample_D (unitless)\nTreatment (unitless)\nPOC (Particulate Organic Carbon, micromol/liter (umol/L))\nPON (micromol/liter (umol/L))\nPOC_PON (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_766374_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_766374/index.htmlTable https://www.bco-dmo.org/dataset/766374 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_766374.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_766374&showErrors=false&email= BCO-DMO bcodmo_dataset_766374
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_766394 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_766394.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_766394/ public [POC and PON - Trichodesmium] - POC and PON from Trichodesmium colonies from RV/Atlantic cruise AT39-05, Feb-Mar 2018 (Collaborative Research:  Iron and phosphorus balanced limitation of nitrogen fixation in the oligotrophic ocean) POC and PON from Trichodesmium colonies from RV/Atlantic cruise AT39-05, Feb-Mar 2018.\n\ncdm_data_type = Other\nVARIABLES:\nStation (unitless)\nExperiment_ID (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nSample_D (unitless)\nTreatment (unitless)\nPOC (Particulate Organic Carbon, micromol/liter (umol/L))\nPON (micromol/liter (umol/L))\nPOC_PON (unitless)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_766394_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_766394/index.htmlTable https://www.bco-dmo.org/dataset/766394 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_766394.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_766394&showErrors=false&email= BCO-DMO bcodmo_dataset_766394
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_920273_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_920273_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_920273_v1/ public [Protein kinase A (PKA) substrate phosphorylation assays] - Results from protein kinase A (PKA) substrate phosphorylation assays conducted to investigate the role of soluble adenylyl cyclase (sAC) in sperm from the gonochoric, broadcast spawning coral Astrangia poculata (Influence of environmental pH variability and thermal sensitivity on the resilience of reef-building corals to acidification stress) Most stony corals liberate their gametes into the water column via broadcast spawning, where fertilization hinges upon the activation of directional sperm motility. Sperm from gonochoric and hermaphroditic corals display distinct morphological and molecular phenotypes, yet it is unknown whether the signallng pathways controlling sperm motility are also distinct between these sexual systems. We addressed this knowledge gap using the gonochoric, broadcast spawning coral Astrangia poculata. This dataset is from protein kinase A (PKA) substrate (sub) phosphorylation assays used to investigate the role of PKA in sperm. Data are associated with Glass et al. (2023) Proceedings of the Royal Society B (10.1098/rspb.2023.0085). These data are also published in Dryad under DOI 10.5061/dryad.rn8pk0pg8.\n\ncdm_data_type = Other\nVARIABLES:\nColony (unitless)\ntime_elapsed (Time, seconds)\nTreatment (unitless)\nStim (unitless)\nLoad (micrograms (ug))\nIntensity (unitless)\nInvert (unitless)\nFold_increase (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_920273_v1/index.htmlTable https://www.bco-dmo.org/dataset/920273 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_920273_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_920273_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_920273_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3766 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_3766.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_3766/ public [pteropod respiration] - Pteropod respiration rates from NW Atlantic and NE Pacific; OC473 (2011) and NH1208 (2012) (Horizontal and Vertical Distribution of Thecosome Pteropods in Relation to Carbonate Chemistry in the Northwest Atlantic and Northeast Pacific ) Respiration rates of thecosome pteropod exposed to various O2 and CO2 concentrations\n\ncdm_data_type = Other\nVARIABLES:\ncruise_id\nspecies (text)\ntreatment (text)\ntemp (Temperature, Celsius)\ndate_local (unitless)\nstation (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\ntow (text)\nweight_g (grams)\nsample_volume (liters)\ntime_elapsed (hours)\nO2_control (micromoles O2)\nO2_expt (micromoles O2)\nO2_respiration (micromoles O2/liter)\nresp_rate (micromoles O2/gram hour)\ncomments_expt (text)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_3766_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_3766/index.htmlTable https://www.bco-dmo.org/dataset/3766 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_3766.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_3766&showErrors=false&email= BCO-DMO bcodmo_dataset_3766
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_489471.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_489471 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_489471.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_489471/ public [pteropod shell dissolution] - Pteropod shell dissolution in natural and high-CO2 environments from samples collected on RRS James Clark Ross cruise JR177 in the Scotia Sea, Southern Ocean from 2007-2008 (An Investigation of the Role of Nutrition in the Coral Calcification Response to Ocean Acidification) This dataset contains data from a study of pteropod shell dissolution on individuals exposed to CO2-enriched seawater. The data include the amount of dissolution as well as the physical and chemical parameters on which carbonate chemistry parameters were calculated.\n\ncdm_data_type = Other\nVARIABLES:\ntreatment (dimensionless)\nincubation_time (days)\nN (dimensionless)\nspecies (dimensionless)\nsal (dimensionless)\ntemp (Temperature, degrees Celsius)\nphosphate (Mass Concentration Of Phosphate In Sea Water, micromoles per kilogram (umol/kg))\nsilicate (Mass Concentration Of Silicate In Sea Water, micromoles per kilogram (umol/kg))\nalk_tot (micromoles per kilogram (umol/kg))\nalk_tot_stdev (micromoles per kilogram (umol/kg))\nDIC (micromoles per kilogram (umol/kg))\nDIC_stdev (micromoles per kilogram (umol/kg))\npH (Sea Water Ph Reported On Total Scale, dimensionless)\npH_stdev (P H Stdev, dimensionless)\npCO2 (P CO2, microatmospheres (uatm))\npCO2_stdev (P CO2 Stdev, microatmospheres (uatm))\nbicarbonate (micromoles per kilogram (umol/kg))\nbicarbonate_stdev (micromoles per kilogram (umol/kg))\ncarbonate (micromoles per kilogram (umol/kg))\ncarbonate_stdev (micromoles per kilogram (umol/kg))\nomega_Arg (dimensionless)\nomega_Arg_stdev (dimensionless)\nnon_diss (percentage (%))\nnon_diss_stdev (percentage (%))\ndiss_rate1 (percentage (%))\n... (5 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_489471/index.htmlTable https://www.bco-dmo.org/dataset/489471 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_489471.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_489471&showErrors=false&email= BCO-DMO bcodmo_dataset_489471
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774017 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774017.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_774017/ public [PUA chlorophyll a] - PUA (polyunsaturated aldehydes) experiments: Chlorophyll-a concentrations, Virginia Coastal Bays and Bay of Napoli, Mar-July 2015 (The effects of diatom-produced polyunsaturated aldehydes on the microbial food web in temperate and polar waters) PUA (polyunsaturated aldehydes) experiments: Chlorophyll-a concentrations, Virginia Coastal Bays and Bay of Napoli, Mar-July 2015.\n\ncdm_data_type = Other\nVARIABLES:\nExperiment (unitless)\nTreatment (unitless)\nRep (unitless)\nChl (micrograms/liter)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_774017/index.htmlTable https://www.bco-dmo.org/dataset/774017 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_774017.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_774017&showErrors=false&email= BCO-DMO bcodmo_dataset_774017
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774033 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774033.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_774033/ public [PUA Microzooplankton Biomass] - Microzooplankton biomass estimates from PUA (polyunsaturated aldehydes) experiments, Virginia Coastal Bays and Bay of Napoli, Mar-July 2015 (The effects of diatom-produced polyunsaturated aldehydes on the microbial food web in temperate and polar waters) Microzooplankton biomass estimates from PUA (polyunsaturated aldehydes) experiments, Virginia Coastal Bays and Bay of Napoli, Mar-July 2015.\n\ncdm_data_type = Other\nVARIABLES:\nExperiment (unitless)\nBottle_ID (unitless)\nTreatment (unitless)\nRep (unitless)\nTaxa (unitless)\nPhylum (unitless)\nESD (micrometers)\nBiomass (micrograms carbon/liter)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_774033/index.htmlTable https://www.bco-dmo.org/dataset/774033 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_774033.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_774033&showErrors=false&email= BCO-DMO bcodmo_dataset_774033
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_918220_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_918220_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_918220_v1/ public [qPCR assays] - Results from qPCR assays to quantify the abundance and photochemical performance of symbionts relative to coral cells in three coral species collected from colonies in southeast Florida in April and October 2019 before, during, and after heat stress tests (Collaborative Research: Assessing the changing symbiotic milieu on Caribbean coral reefs under climate change: magnitude, tradeoffs, interventions, and implications) This dataset contains results from assays to quantify the abundance and photochemical performance of Breviolum, Cladocopium, and Durusdinium symbionts relative to coral cells in Montastraea cavernosa, Orbicella faveolata, and Siderastrea siderea corals collected from colonies in southeast Florida in April 2019 and in October 2019, before, during and after aquarium-based experimental heat stress tests. Bulk genomic DNA was extracted from tissue scrapings taken from 2.5cm diameter cores of corals and was used as a template for symbiont genus-specific qPCR assays. The resulting CT values were used to calculate the relative abundance of each symbiont genus within each coral core over the course of the heat stress. The photochemical efficiency of each coral core was also measured periodically throughout heat stress tests using an imaging pulse amplitude modulated (I-PAM) fluorometer. The publication based on these data is Buzzoni, et al. (2023) (DOI: 10.1007/s00338-023-02428-x).\n\ncdm_data_type = Other\nVARIABLES:\nSpecies (unitless)\nTreatment (unitless)\nCore (unitless)\nCollection_Latitude (degrees_north)\nlongitude (Collection_longitude, degrees_east)\nTimepoint (unitless)\nSym_Host (unitless)\nY2 (unitless)\nPropD (unitless)\nBatch (unitless)\nDate (unitless)\nColony (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_918220_v1/index.htmlTable https://www.bco-dmo.org/dataset/918220 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_918220_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_918220_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_918220_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_518508 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_518508.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_518508/ public [Remineralization Experiments] - Experimental results: Remineralization experiments to assess the ability of natural assemblages of bacteria to utilize DOM produced under Si and N limitation (SBDOM project, SBC LTER project) (Mechanisms controlling the production and fate of DOM during diatom blooms) Culture studies of diatoms that dominate spring blooms in the Santa Barbara Channel were used to examine the effects of N and Si stress on the magnitude of production and the chemical composition of DOM (see the BIB Experiments dataset). The ability of natural assemblages of bacteria to utilize DOM produced under Si and N limitation was then assessed using remineralization experiments. Species examined in the remineralization experiments include: Skeletonema marinoi, Chaetoceros socialis, Thalassiosira weissflogii, and Odontella aurita.\n\ncdm_data_type = Other\nVARIABLES:\nspecies (text)\ntreatment (text)\nreplicate (integer)\ntime_point (integer)\ndays_elapsed (number)\nDOC (micromoles per Liter (umol/L))\nDOC_sd (micromoles per Liter (umol/L))\nTDN (micromoles per Liter (umol/L))\nTDN_sd (micromoles per Liter (umol/L))\nNO3_NO2 (micromoles per Liter (umol/L))\nNH4 (micromoles per Liter (umol/L))\nPO4 (Mass Concentration Of Phosphate In Sea Water, micromoles per Liter (umol/L))\ndSi (D Si, micromoles per Liter (umol/L))\nbact_abund_FCM (cells per Liter (cells/L))\nbact_abund_DAPI (cells per Liter (cells/L))\nbact_abund_DAPI_sd (cells per Liter (cells/L))\nbact_prod (picomoles Leucine per Liter per hour (pmol Leu/L/hr))\nbact_prod_sd (picomoles Leucine per Liter per hour (pmol Leu/L/hr))\nspecifc_growth_rate (per day)\nbact_growth_eff (unitless)\nDNA_sampled (yes or no)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_518508/index.htmlTable https://www.bco-dmo.org/dataset/518508 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_518508.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_518508&showErrors=false&email= BCO-DMO bcodmo_dataset_518508
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_908155_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_908155_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_908155_v1/ public [RNA:DNA Ratios and Total lipids – experiment data] - RNA:DNA and total lipid measurements for laboratory-based experimental animals collected from the Gulf of Mexico Estuary near Port Aransas, Texas from 2020 to 2022 (Counter-gradient Flow of Fatty Acids in Marine Food Webs Through Egg Boons) RNA:DNA and total lipid measurements for laboratory-based experimental animals collected from the Gulf of Mexico Estuary near Port Aransas, Texas from 2020 to 2022. Laboratory experiments took place at the Fisheries and Mariculture Laboratory of the University of Texas Marine Science Institute from July 2021 to November 2022.\n\ncdm_data_type = Other\nVARIABLES:\nTaxon (unitless)\nTissue_sampled (unitless)\nLength (centimeters (cm))\nTank_number (unitless)\nAcclimation_days (days)\nDays_after_acclimation (days)\nTreatment (unitless)\nDiet_fed (unitless)\nNotes (unitless)\nPrimary_check (unitless)\nTotal_lipids (milligrams per gram of dry weight (mg g-1 dw))\nRNA_DNA (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_908155_v1/index.htmlTable https://www.bco-dmo.org/dataset/908155 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_908155_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_908155_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_908155_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_907028_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_907028_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_907028_v1/ public [RR2004 Bottle Data] - CTD-associated variables, bottle salinity measurements, oxygen titrations, nutrient analyses, biogeochemical/biological variables, and DIC/Freon chemistry variables from R/V Roger Revelle cruise RR2004 along the 150W meridian from 30S to 60S (Collaborative Research: Biogeochemical and Physical Conditioning of Sub-Antarctic Mode Water in the Southern Ocean) These data are part of the NSF project \"Collaborative Research: Biogeochemical and Physical Conditioning of Sub-Antarctic Mode Water in the Southern Ocean\". Specifically, these are the discrete bottle data from cruise RR2004 aboard R/V Roger Revelle, which sailed from Honolulu, Hawaii on 26 December 2020 to the Southern Ocean and returned to Honolulu on 23 February 2021. The purpose of the project was to define the processes that condition Sub-Antarctic Mode Water (SAMW) formed at the Sub-Antarctic Front in the Southern Ocean. The cruise track was from 30 degrees South to 60 degrees South along the 150 degrees West meridian as well as an investigation of frontal boundaries and eddies further east (from 45S to 57S by ~145W). Bottle data were collected from CTD casts with tripped Niskin bottles on the CTD Rosette. Trace-metal-clean casts were performed using Niskin-X bottles suspended on Kevlar line and a trace-metal-clean block.  \n\nThe data reported herein fall into several categories, A) CTD-associated variables, B) bottle salinity measurements, C) oxygen titrations and nutrient analyses, biogeochemical/biological variables, and D) DIC/Freon chemistry variables. Regarding the specific data, we first report CTD variables (salinity, temperature, potential temperature, density, dissolved oxygen, sound velocity, pressure,  depth,  conductivity,   SeaBird-probe-derived oxygen concentrations, chlorophyll fluorescence, beam transmittance (660nm; %), backscattering, CTD PAR, and surface PAR reference.    Next, results from bottle samples for salinity, lab oxygen titration, and nutrient concentrations (nitrate, phosphate, silicate, nitrite, and ammonium). The following biogeochemical and biological variables are presented: particulate organic carbon concentration (POC), particulate organic nitrogen (PON), and particulate inorganic carbon (PIC), concentration of detached coccoliths (given as birefringent singlets, doublets, triplets, or quadruplets, when viewed in a compound microscope with polarization optics), total coccolith concentration (the sum of singlets, doublets, triplets or quadruplets), concentration of birefringent plated coccolithophore cells, coccospheres or coccolith aggregates, planar area subtended by detached coccoliths or plated cells, concentration of biogenic silica, concentration of chlorophyll, phaeopigment and their sum. There are a suite of variables from FlowCAM measurements, mostly done on particles greater than 5 micrometers (um) in diameter: Particle size distribution function (PSDF) slope, standard error of PSDF slope, Y-intercept of the PSDF, R^2 of the PDF slope, F statistic of PSDF slope, total cell concentration per milliliter (mL), concentrations (in cells per mL) of small 0-4um diameter cells, 4-12um round cells, 4-12um diameter ovoid cells, dinoflagellates, ciliates, diatoms silicoflagellates, other unidentified cells, followed by percent of total cell concentrations and carbon biomass (using equations of Menden Deuer and Lessard) for the same cell categories. Carbon fixation rates are then presented for: ratio of calcification/photosynthesis, photosynthesis, calcification, standard deviation of photosynthesis and calcification measurements, chlorophyll concentration within incubation bottles, chlorophyll normalized photosynthesis, and calcification. Finally, corrected salinity (based on bottle salinity), corrected SeaBird oxygen values based on lab oxygen titrations, dissolved inorganic carbon (DIC) concentrations, total alkalinity and concentration of CFC12 and CFC11 freons are presented.\n\ncdm_data_type = Other\nVARIABLES:\nSample (unitless)\n... (135 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_907028_v1_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_907028_v1_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_907028_v1/index.htmlTable https://www.bco-dmo.org/dataset/907028 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_907028_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_907028_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_907028_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_644035.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_644035 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_644035.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_644035/ public [Sargassum recruit-sized survival - figure 3] - Effect of habitat, origin, and herbivory on the survival and growth of recruit-sized S. polycystum fronds from MPAs and non-MPAs when reciprocally transplanted (Killer Seaweeds: Allelopathy against Fijian Corals) Raw data on the survival of recruit-sized ramets of Sargassum polycystum\noriginated from marine protected and non-protected areas (MPAs and non-MPAs,\nrespectively) in Fiji, reciprocally transplanted between these areas in two\nconditions: protected by closed cages or exposed to grazing in partially open\ncages. Survival data is the average number of days survived by the four MPA\nramets and by the four non-MPA ramets in each of the cages. Details in Dell et\nal. 2016 Plos One.\n \nRelated Datasets:  \n[Sargassum mature growth - figure 2](\\\\http://www.bco-\ndmo.org/dataset/643915\\\\)  \n[Sargassum mature growth conspecific - figure 4](\\\\http://www.bco-\ndmo.org/dataset/644062\\\\)  \n[Sargassum recruit-sized growth and survival with conspecifics - figures 5 and\n6](\\\\https://www.bco-dmo.org/dataset/644080\\\\)\n\ncdm_data_type = Other\nVARIABLES:\nlatitude (degrees_north)\nlongitude (degrees_east)\nlocation (unitless)\norigin (unitless)\ntreatment (unitless)\naverage_days_survived (days)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_644035_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_644035/index.htmlTable https://www.bco-dmo.org/dataset/644035 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_644035.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_644035&showErrors=false&email= BCO-DMO bcodmo_dataset_644035
log in [Scallop Survival Assays] - Data from scallop survival assays conducted as part of a larger concurrent study of fragmentation effects on estuarine faunal communities with Artificial Seagrass Units (ASU) in Back Sound, NC from July to September 2018 (Collaborative Research: Habitat fragmentation effects on fish diversity at landscape scales: experimental tests of multiple mechanisms) This dataset contains metadata and data from scallop survival assays conducted in 2018 (assays across landscape area x fragmentation per se treatments) as part of the following study published in Yarnall et al. (2024):\n\nTo parse the influences of fragmentation components on scallop survival, we generated nine unique landscapes composed of artificial seagrass units (ASUs), were constructed to mimic Zostera marina. These landscapes were part of a larger-scale concurrent experiment, during which we examined seagrass fragmentation effects on estuarine faunal communities (Yarnall et al. In Press). Landscapes were designed to be treatments along orthogonal axes of seagrass percent cover of the landscape footprint (10%, 35%, 60%) and fragmentation per se, indexed by percolation probability (0.1, 0.35, 0.59). \nRelative scallop survival was measured by deploying tethered juvenile bay scallops in two density treatments. Five 24-h survival assay trials were conducted from July to September 2018. During each survival assay, observers snorkel surveyed tethers and recorded the number of live and dead scallops per treatment. \n\nData were collected by Drs. F. Joel Fodrie and Amy H. Yarnall for the Estuarine Ecology Laboratory of the University of North Carolina at Chapel Hill's Institute of Marine Sciences.\n\ncdm_data_type = Other\nVARIABLES:\nSite_ID (unitless)\nPer_cov (percent (%))\nFrag (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nDate_In (unitless)\nTime_In (unitless)\ntime (Iso_datetime_utc_in, seconds since 1970-01-01T00:00:00Z)\nCheck_num (unitless)\nDate_check (unitless)\n... (20 more variables)\n BCO-DMO bcodmo_dataset_939581_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_682298 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_682298.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_682298/ public [Seeded microcosm experiments: all data] - Nutrients, microbiology, trace metals, and environmental conditions from seeded microcosm experiments (Vibrio as a model microbe for opportunistic heterotrophic response to Saharan dust deposition events in marine waters) Nutrients, microbiology, trace metals, and environmental conditions from seeded microcosm experiments.\n\ncdm_data_type = Other\nVARIABLES:\nyear (year)\nexpt (unitless)\ntreatment (unitless)\nlight_dark (unitless)\nvessel (unitless)\nreplicate (unitless)\ntime_elapsed_hr (hours)\nsample (unitless)\nVibrio (colony forming units/milliliter (CFU/ml))\nChl_a (Concentration Of Chlorophyll In Sea Water, microgram/liter (ug/L))\nDOC (micromol/liter C (umol/L))\nDON (micromol/liter N (umol/L))\nNH4 (micromol/liter N (umol/L))\nNO3 (micromol/liter N (umol/L))\nNO2 (Mole Concentration Of Nitrite In Sea Water, micromol/liter N (umol/L))\nOrthophosphate (micromol/liter P (umol/L))\nSiO4 (Si O4, micromol/liter Si (umol/L))\ndFe (D Fe, nanoMolar (nM))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_682298/index.htmlTable https://www.bco-dmo.org/dataset/682298 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_682298.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_682298&showErrors=false&email= BCO-DMO bcodmo_dataset_682298
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_734364 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_734364.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_734364/ public [Shipboard bioassay experiments] - Dissolved inorganic nitrogen, chlorophyll-a, and primary production from bioassay experiments during the R/V Hugh R. Sharp cruise HRS1414 in the Mid and South-Atlantic Bight in August of 2014 (DANCE project) (Collaborative Research: Impacts of atmospheric nitrogen deposition on the biogeochemistry of oligotrophic coastal waters) Three bioassay experiments were conducted in August of 2014 during the R/V Hugh R. Sharp cruise HRS1414 which generated measurements of dissolved inorganic nitrogen, chlorophyll-a and primary productivity.  Treatments included various nutrient (N,Fe,P) additions and rainwater.\\r\\n\\r\\nThis dataset was utilized in the following publication:\\r\\nSedwick. P. N., et al. \\Assessing phytoplankton nutritional status and potential impact of wet deposition in seasonally oligotrophic waters of the Mid-Atlantic Bight.\\ Geophysical Research Letters (2018): doi: 10.1002/2017GL075361\n\ncdm_data_type = Other\nVARIABLES:\nexperiment (unitless)\ntreatment (unitless)\ntime2 (Time, hours)\nmean_NO3_NO2 (Mole Concentration Of Nitrate In Sea Water, micromoles per liter (umol/L))\nSD_NO3_NO2 (micromoles per liter (umol/L))\nmean_NH4 (micromoles per liter (umol/L))\nSD_NH4 (micromoles per liter (umol/L))\nmean_Chl_a (Concentration Of Chlorophyll In Sea Water, micrograms per liter (mg/L))\nSD_Chl_a (micrograms per liter (mg/L))\nmean_PP (micromoles C per liter per day (umol C/L/d))\nSD_PP (micromoles C per liter per day (umol C/L/d))\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_734364/index.htmlTable https://www.bco-dmo.org/dataset/734364 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_734364.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_734364&showErrors=false&email= BCO-DMO bcodmo_dataset_734364
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_926887_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_926887_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_926887_v1/ public [Short-term heat stress assay Heron Island -  physiological data] - Photochemical yield and color score data from short-term heat stress assays performed with with corals collected from sites around Heron Island, southern Great Barrier Reef  in Sept and Oct of 2022 (Influence of environmental pH variability and thermal sensitivity on the resilience of reef-building corals to acidification stress) Variable temperature regimes that expose corals to sub-lethal heat stress have been recognized as a mechanism to increase coral thermal tolerance and lessen coral bleaching. However, there is a need to better understand which thermal regimes maximize coral stress hardening. Here, standardized thermal stress assays were used to determine the relative thermal tolerance of three divergent genera of corals (Acropora, Pocillopora, Porites) originating from six reef sites representing an increasing gradient of annual mean diel temperature fluctuations of 1–3°C day-1. Bleaching severity and dark-acclimated photochemical yield (i.e., Fv/Fm) were quantified following exposure to five temperature treatments ranging from 23.0 to 36.3°C (see Related Datasets for temperature data). This data set contains photochemical yield and color score data used to determine effective dose 50 (ED50, thermal tolerance). It also includes images used for analysis of coral color, a proxy for bleaching severity.\n\ncdm_data_type = Other\nVARIABLES:\nSite_Code (unitless)\nSite_Name (unitless)\nlatitude (degrees_north)\nlongitude (degrees_east)\nGenus (unitless)\nColonyID (unitless)\nTreatment_nonnum (unitless)\nTreatment (unitless)\nReplicate (unitless)\nTemperature (degrees Celsius (degC))\nF0 (unitless)\nFm (unitless)\nY (unitless)\nLabel (unitless)\nColor_type (unitless)\nColor (unitless)\nName (unitless)\n... (7 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_926887_v1_fgdc.xml https://erddap.bco-dmo.org/erddap/metadata/iso19115/xml/bcodmo_dataset_926887_v1_iso19115.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_926887_v1/index.htmlTable https://www.bco-dmo.org/dataset/926887 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_926887_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_926887_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_926887_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_926905_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_926905_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_926905_v1/ public [Short-term heat stress assay Heron Island - experimental temperature data] - Temperature data from short-term heat stress assays performed with with corals collected from sites around Heron Island, southern Great Barrier Reef  in Sept and Oct of 2022 (Influence of environmental pH variability and thermal sensitivity on the resilience of reef-building corals to acidification stress) Variable temperature regimes that expose corals to sub-lethal heat stress have been recognized as a mechanism to increase coral thermal tolerance and lessen coral bleaching. However, there is a need to better understand which thermal regimes maximize coral stress hardening. Here, standardized thermal stress assays were used to determine the relative thermal tolerance of three divergent genera of corals (Acropora, Pocillopora, Porites) originating from six reef sites representing an increasing gradient of annual mean diel temperature fluctuations of 1–3°C day-1. Bleaching severity and dark-acclimated photochemical yield (i.e., Fv/Fm) were quantified following exposure to five temperature treatments ranging from 23.0 to 36.3°C (see Related Datasets for photochemical yield). This data set contains the short-term heat stress temperature data.\n\ncdm_data_type = Other\nVARIABLES:\nindex (unitless)\nDate (unitless)\ntime_local (Time, unitless)\nDateTime_Local (unitless)\nTemperature (degrees Celsius (degC))\nday (unitless)\nSite (unitless)\nTreatment (unitless)\ntime (Datetime_utc, seconds since 1970-01-01T00:00:00Z)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_926905_v1/index.htmlTable https://www.bco-dmo.org/dataset/926905 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_926905_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_926905_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_926905_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_914723_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_914723_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_914723_v1/ public [Short-term heat stress assay: Photochemical yield data] - Photochemical yield and bleaching severity data from a standardized short-term (18 hour) heat stress assay of Montipora capitata and Porites compressa collected at a patch reef in Kane'ohe Bay, O'ahu, Hawai'i in September of 2022 (RAPID: Collaborative Research: Disentangling the effects of heat stress versus bleaching phenotype on coral performance) Increasingly frequent marine heatwaves are devastating coral reefs. Corals that survive these extreme events must rapidly recover if they are to withstand subsequent events, and long-term survival in the face of rising ocean temperatures may hinge on recovery capacity and acclimatory gains in heat tolerance over an individual's lifespan. To better understand coral recovery trajectories in the face of successive marine heatwaves, we monitored the responses of bleaching-susceptible and bleaching-resistant individuals of two dominant coral species in Hawaiʻi, Montipora capitata and Porites compressa, over a decade that included three marine heatwaves.  This dataset includes the photochemical yield from the standardized short-term (18 hour) heat stress assay.\n\ncdm_data_type = Other\nVARIABLES:\nTreatment (unitless)\nTemperature (degrees Celcius)\nSpecies (unitless)\nBleach (unitless)\nColony_ID (unitless)\nRep (unitless)\nF (unitless)\nY (unitless)\nM (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_914723_v1/index.htmlTable https://www.bco-dmo.org/dataset/914723 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_914723_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_914723_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_914723_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_914715_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_914715_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_914715_v1/ public [Short-term heat stress assay: Temperature data] - Temperature data from a standardized short-term (18 hour) heat stress assay of Montipora capitata and Porites compressa collected at a patch reef in Kane'ohe Bay, O'ahu, Hawai'i in September of 2022 (RAPID: Collaborative Research: Disentangling the effects of heat stress versus bleaching phenotype on coral performance) Increasingly frequent marine heatwaves are devastating coral reefs. Corals that survive these extreme events must rapidly recover if they are to withstand subsequent events, and long-term survival in the face of rising ocean temperatures may hinge on recovery capacity and acclimatory gains in heat tolerance over an individual's lifespan. To better understand coral recovery trajectories in the face of successive marine heatwaves, we monitored the responses of bleaching-susceptible and bleaching-resistant individuals of two dominant coral species in Hawaiʻi, Montipora capitata and Porites compressa, over a decade that included three marine heatwaves. This dataset includes the temperature data from the standardized short-term (18 hour) heat stress assay.\n\ncdm_data_type = Other\nVARIABLES:\nDate (unitless)\ntime_local (Time, unitless)\nhour (hours)\nTemperature (degrees celcius)\nTreatment (unitless)\nDate_Time (unitless)\ntime (Iso_datetime_utc, seconds since 1970-01-01T00:00:00Z)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_914715_v1/index.htmlTable https://www.bco-dmo.org/dataset/914715 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_914715_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_914715_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_914715_v1
log in [Sitka Sound Kelp Wet Weights] -  (CAREER: Energy fluxes and community stability in a dynamic, high-latitude kelp ecosystem) While the recently decimated predatory sea star, Pycnopodia helianthoides, may support kelp forests by consuming herbivorous sea urchins, less is known about their non-consumptive effects. We conducted a field experiment in three replicate sea urchin barrens in Sitka Sound, AK in February of 2023, where we deployed pre-weighed Macrocystis pyrifera blades at discrete distances on four metre radial cables from caged adult P. helianthoides and control cages and reweighed after 24 hours. Our results suggest the chemical cue of P. helianthoides elicits a localised, species-specific landscape of fear of approximately 15m2 that suppresses grazing, and that the non-consumptive effects of  P. helianthoides on sea urchin behaviour may be important for kelp restoration.\n\ncdm_data_type = Other\nVARIABLES:\nRayID (unitless)\nSite (unitless)\nlatitude (degrees_north)\nlongitude (Long, degrees_east)\nTreatment (unitless)\nRepID (unitless)\nReplicate (unitless)\nTreatRep (unitless)\nDate (unitless)\nTimeElapsed_hr (hours)\nRay (unitless)\nTrack (unitless)\nColor (unitless)\nDist_m (meters (m))\nKelpStartWt_g (grams (g))\nAttachedKelpEndWt_g (grams (g))\nDriftKelpEndWt_g (grams (g))\nTotal_KelpEndWt_g (grams (g))\nKelpChgWt_g (grams (g))\nKelpGrazed_g (grams (g))\nPercentKelpGrazed (unitless)\nFlags (unitless)\n BCO-DMO bcodmo_dataset_942729_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_908200_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_908200_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_908200_v1/ public [Stable Isotope measurements – experimental animals] - Carbon and Nitrogen stable isotope measurements for experimental animals used in laboratory-based experiments collected from the Gulf of Mexico Estuary near Port Aransas, Texas from 2020 to 2022 (Counter-gradient Flow of Fatty Acids in Marine Food Webs Through Egg Boons) Carbon and Nitrogen stable isotope measurements for experimental animals used in laboratory-based experiments collected from the Gulf of Mexico Estuary near Port Aransas, Texas from 2020 to 2022. Laboratory experiments took place at the Fisheries and Mariculture Laboratory of the University of Texas Marine Science Institute from July 2021 to November 2022.\n\ncdm_data_type = Other\nVARIABLES:\nTaxon (unitless)\nTissue_sampled (unitless)\nLength (centimeters (cm))\nTank_number (unitless)\nAcclimation_days (days)\nDays_after_acclimation (days)\nTreatment (unitless)\nDiet_fed (unitless)\nNotes (unitless)\nPrimary_check (unitless)\nd13C (per mil)\npercent_C (percentage)\nd15N (per mil)\npercent_N (percentage)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_908200_v1/index.htmlTable https://www.bco-dmo.org/dataset/908200 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_908200_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_908200_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_908200_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_732890 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_732890.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_732890/ public [Symbiodinium Fv/Fm over a temperature gradient] - Fv/Fm for cultured Clade A & B Symbiodinium with 2 treatments measured over a range of temperatures (Coevolution of scleractinian corals and their associated microorganisms) Coral photosynthetic endosymbionts (Symbiodinium) are phylogenetically very diverse, yet the extent of inter- and intraspecific functional variation within clades remains largely underexplored. Understanding this variability will be critical for future research on climate change mediated responses. A properly functioning thylakoid membrane is essential for optimal photosynthetic performance both in free-living and in hospite conditions. Here we analyze the thylakoid membrane melting points of 13  Symbiodinium strains from species in Clades B and A, grown at both control (26 \\u00b0C)  and high temperature (31 \\u00b0C). We observed a broad range of responses to thermal stress regardless of taxonomic rank. Our results support and augment a growing body of literature demonstrating that functional differences among Symbiodinium spp. are as distinct at lower taxonomic levels (i.e. interspecific) as they are among major clades. These findings highlight the importance of assessing the variability of plastid traits across the Symbiodinium tree.\n\ncdm_data_type = Other\nVARIABLES:\nStrain (unitless)\nSpecies (unitless)\nTreatment (unitless)\nReplicate (unitless)\nTemperature (degrees Celsius)\nFv_Fm (dimensionless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_732890/index.htmlTable https://www.bco-dmo.org/dataset/732890 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_732890.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_732890&showErrors=false&email= BCO-DMO bcodmo_dataset_732890
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_488860.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_488860 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_488860.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_488860/ public [tidepool ammonium and mussels] - Ammonium in tidepools with and without mussels from Cape Flattery, WA from 2010-2011 (Regenerated Nitrogen project) (The Role of Regenerated Nitrogen for Rocky Shore Productivity) We evaluated the role of mussels by adding 15N-labeled NH4+ to an assemblage\nof tidepools where they were either present at natural abundance levels, or\nabsent through manual removal. \\u00a0The role of phototrophs was separately\nexamined by conducting these experiments both during the day and at night.\n\\u00a0The tidal height of pools varied between 1.2 to 1.5 m above Mean Lower\nLow Water (MLLW). Tidepools were thus isolated from each other as well as the\nnearshore environment during the low tide period when experiments were\nconducted. Each experiment included 4 to 5 mussel removal (MR) tidepools\n(since 2002) and 4 to 5 mussel control (MC) tidepools with natural mussel\ndensities. \\u00a0In June 2010, we performed daytime NH4+ tracer experiments\nand in August 2010 nighttime experiments using the same tidepools. The\nfollowing year (July 2011) these experiments were repeated with the addition\nof bottle incubations (see below) to evaluate the effects of suspended\ntidepool components and extended sampling for 6 days after the initial 15N\naddition to test for long-term retention of NH4+. \\u00a0During the 2011\nexperiments, unforeseen rain reduced the salinity in some pools by up to 51%,\nand we have attempted to correct for the expected dilution of NH4+ in our\ntidepool rate calculations.\n \nBecause isotope enrichment levels were relatively low, we used the\nconventional delta notation instead of atom% to describe variations in 15N\nenrichment (where delta-15NH4+ = {(15N:14N sample \\u00f7 15N:14N standard)\n-1}\\u00d71000\\u2030, where the standard is atmospheric N2. \\u00a0Tracer\nlabeled ammonium chloride (15NH4Cl) was added to the pools to approximate a\n1000\\u2030 enrichment in 2010 (doubling the 15N-NH4+ concentration) and a\n2000\\u2030 enrichment in 2011(tripling the 15N-NH4+ concentration). 15N\nnatural abundance is only 0.365% and these tracer additions thus had a\nnegligible effect on the overall NH4+ concentrations increasing them by only\n~0.4% and ~0.8%, respectively. Tidepool volumes were estimated\nspectrophotometrically using varying concentrations of food dye (Pfister\n1995). Together with estimates of NH4+ concentration (from 2009 data), we\nestimated the tracer addition required to achieve the targeted 15N\nenrichments. However, the actual initial enrichments varied substantially,\n684.4 - 2406.4\\u2030 in 2010 and 781.4 - 3880.2\\u2030 in 2011, likely due to\nerror in tidepool volume estimation and natural variations in initial NH4+\nconcentrations. Fortunately, we sampled immediately following each tracer\naddition allowing for the determination of the true initial 15N enrichment.\n\\u00a0\n \nPrior to tracer addition at ebb tide, 100 mL of tidepool water was syringe-\nfiltered (Whatman GF/F) into separate HDPE bottles for natural abundance\n15NH4+ and concentration determination. \\u00a0To each pool, tracer 15NH4+ was\nthen added and distributed by stirring with a stick. Water samples were\nimmediately collected for measuring initial 15N enrichment and subsequently at\n2, 4, and 6 hour intervals to determine isotope and concentration time\ncourses. All water samples were frozen until analysis. Tidepool oxygen, pH,\nand temperature (Hach HQ4D) were also collected at ~ 2 h intervals throughout\nthe experiment.\n \nIn 2011 we also assessed the contribution of the suspended microbial community\nto NH4+ cycling by enclosing tidepool water in a 250 mL transparent\npolycarbonate incubation bottle. Following tracer addition, the bottle was\nfilled, then left to float in the tidepool for the duration of the experiment.\nSamples from bottles were filtered as described both immediately after\ncontainment and at the end of the experiment (~6 h later).\n \nWe assessed macroalgal contribution to NH4+ removal by transplanting two\ntidepool-dwelling algae species. \\u00a0Prionitis sternbergii were sampled 2\nweeks prior to the experiment for baseline natural abundance 15N values and\ntransplanted into the pools with Z-Spar Epoxy (Pfister 2007). On the day of\nthe experiment, the red-alga, Corallina vancouveriensis from a single source\npatch, was also sampled for 15N natural abundance, inserted into pieces of\nStyrofoam, and floated in each pool.\n \nAt the end of each experiment (~6 h sampling point), we sampled tidepool\nparticulate organic material (POM) by filtering through combusted GF/F filters\nuntil they clogged (~ 600 mL), comparing these samples with POM similarly\nsampled from the immediate nearshore. \\u00a0Floating Corallina spp. samples\nwere collected into clean Eppendorf tubes, and similar sized pieces of\nPrionitis spp. were collected from each pool into clean foil packets.\\u00a0  \n We evaluated the extent of longer-term 15N tracer retention in 2011 by\nsampling tidepool water, POM and transplanted Prionitis 1, 3, and 6 days\nfollowing tracer addition. We sampled at ebb tide and at again at slack water\njust prior to high tide on the first day after tracer addition (that is, 24 h\nlater) and at slack water prior to high tide on Day 3 and 6.\\u00a0\n \nRelevant References:\n \n2014\\. Pather, S., C. A. Pfister, M. Altabet, D. M. Post. Ammonium cycling in\nthe rocky intertidal: remineralization, removal and retention. Limnology and\nOceanography\n59:361-372.\\u00a0[http://aslo.org/lo/toc/vol_59/issue_2/0361.htm](\\\\http://aslo.org/lo/toc/vol_59/issue_2/0361.html\\\\)\n \nDOI for this dataset:\\u00a0The role of regenerated nitrogen for rocky shore\nproductivity, Cape Flattery, Washington, 2010 &\n2011.\\u00a0Handle:\\u00a0[http://hdl.handle.net/1912/6420](\\\\http://hdl.handle.net/1912/6420\\\\).\\u00a0DOI:10.1575/1912/6420\n \nRelated Datasets:  \n[ammonium removal by seaweeds](\\\\https://www.bco-dmo.org/dataset/489420\\\\)  \n[filter tracer content](\\\\https://www.bco-dmo.org/dataset/489283\\\\)  \n[natural abundance N and C filter content](\\\\http://www.bco-\ndmo.org/dataset/489310\\\\)  \n[tidepool incubation ammonium](\\\\https://www.bco-dmo.org/dataset/489085\\\\)\n\ncdm_data_type = Other\nVARIABLES:\nsite (unitless)\n... (18 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_488860_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_488860/index.htmlTable https://www.bco-dmo.org/dataset/488860 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_488860.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_488860&showErrors=false&email= BCO-DMO bcodmo_dataset_488860
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_489085.subset https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_489085 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_489085.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_489085/ public [tidepool incubation ammonium] - Ammonium levels in incubated bottles in tidepools from Cape Flattery, WA from 2010-2011 (Regenerated Nitrogen project) (The Role of Regenerated Nitrogen for Rocky Shore Productivity) We evaluated the role of mussels by adding 15N-labeled NH4+ to an assemblage\nof tidepools where they were either present at natural abundance levels, or\nabsent through manual removal. \\u00a0The role of phototrophs was separately\nexamined by conducting these experiments both during the day and at night.\n\\u00a0The tidal height of pools varied between 1.2 to 1.5 m above Mean Lower\nLow Water (MLLW). Tidepools were thus isolated from each other as well as the\nnearshore environment during the low tide period when experiments were\nconducted. Each experiment included 4 to 5 mussel removal (MR) tidepools\n(since 2002) and 4 to 5 mussel control (MC) tidepools with natural mussel\ndensities. \\u00a0In June 2010, we performed daytime NH4+ tracer experiments\nand in August 2010 nighttime experiments using the same tidepools. The\nfollowing year (July 2011) these experiments were repeated with the addition\nof bottle incubations (see below) to evaluate the effects of suspended\ntidepool components and extended sampling for 6 days after the initial 15N\naddition to test for long-term retention of NH4+. \\u00a0During the 2011\nexperiments, unforeseen rain reduced the salinity in some pools by up to 51%,\nand we have attempted to correct for the expected dilution of NH4+ in our\ntidepool rate calculations.\n \nBecause isotope enrichment levels were relatively low, we used the\nconventional delta notation instead of atom% to describe variations in 15N\nenrichment (where delta-15NH4+ = {(15N:14N sample \\u00f7 15N:14N standard)\n-1}\\u00d71000\\u2030, where the standard is atmospheric N2. \\u00a0Tracer\nlabeled ammonium chloride (15NH4Cl) was added to the pools to approximate a\n1000\\u2030 enrichment in 2010 (doubling the 15N-NH4+ concentration) and a\n2000\\u2030 enrichment in 2011(tripling the 15N-NH4+ concentration). 15N\nnatural abundance is only 0.365% and these tracer additions thus had a\nnegligible effect on the overall NH4+ concentrations increasing them by only\n~0.4% and ~0.8%, respectively. Tidepool volumes were estimated\nspectrophotometrically using varying concentrations of food dye (Pfister\n1995). Together with estimates of NH4+ concentration (from 2009 data), we\nestimated the tracer addition required to achieve the targeted 15N\nenrichments. However, the actual initial enrichments varied substantially,\n684.4 - 2406.4\\u2030 in 2010 and 781.4 - 3880.2\\u2030 in 2011, likely due to\nerror in tidepool volume estimation and natural variations in initial NH4+\nconcentrations. Fortunately, we sampled immediately following each tracer\naddition allowing for the determination of the true initial 15N enrichment.\n\\u00a0\n \nPrior to tracer addition at ebb tide, 100 mL of tidepool water was syringe-\nfiltered (Whatman GF/F) into separate HDPE bottles for natural abundance\n15NH4+ and concentration determination. \\u00a0To each pool, tracer 15NH4+ was\nthen added and distributed by stirring with a stick. Water samples were\nimmediately collected for measuring initial 15N enrichment and subsequently at\n2, 4, and 6 hour intervals to determine isotope and concentration time\ncourses. All water samples were frozen until analysis. Tidepool oxygen, pH,\nand temperature (Hach HQ4D) were also collected at ~ 2 h intervals throughout\nthe experiment.\n \nIn 2011 we also assessed the contribution of the suspended microbial community\nto NH4+ cycling by enclosing tidepool water in a 250 mL transparent\npolycarbonate incubation bottle. Following tracer addition, the bottle was\nfilled, then left to float in the tidepool for the duration of the experiment.\nSamples from bottles were filtered as described both immediately after\ncontainment and at the end of the experiment (~6 h later).\n \nWe assessed macroalgal contribution to NH4+ removal by transplanting two\ntidepool-dwelling algae species. \\u00a0Prionitis sternbergii were sampled 2\nweeks prior to the experiment for baseline natural abundance 15N values and\ntransplanted into the pools with Z-Spar Epoxy (Pfister 2007). On the day of\nthe experiment, the red-alga, Corallina vancouveriensis from a single source\npatch, was also sampled for 15N natural abundance, inserted into pieces of\nStyrofoam, and floated in each pool.\n \nAt the end of each experiment (~6 h sampling point), we sampled tidepool\nparticulate organic material (POM) by filtering through combusted GF/F filters\nuntil they clogged (~ 600 mL), comparing these samples with POM similarly\nsampled from the immediate nearshore. \\u00a0Floating Corallina spp. samples\nwere collected into clean Eppendorf tubes, and similar sized pieces of\nPrionitis spp. were collected from each pool into clean foil packets.\\u00a0  \n We evaluated the extent of longer-term 15N tracer retention in 2011 by\nsampling tidepool water, POM and transplanted Prionitis 1, 3, and 6 days\nfollowing tracer addition. We sampled at ebb tide and at again at slack water\njust prior to high tide on the first day after tracer addition (that is, 24 h\nlater) and at slack water prior to high tide on Day 3 and 6.\\u00a0\n \nRelevant References:\n \n2014\\. Pather, S., C. A. Pfister, M. Altabet, D. M. Post. Ammonium cycling in\nthe rocky intertidal: remineralization, removal and retention. Limnology and\nOceanography\n59:361-372.\\u00a0[http://aslo.org/lo/toc/vol_59/issue_2/0361.htm](\\\\http://aslo.org/lo/toc/vol_59/issue_2/0361.html\\\\)\n \nDOI for this dataset:\\u00a0The role of regenerated nitrogen for rocky shore\nproductivity, Cape Flattery, Washington, 2010 &\n2011.\\u00a0Handle:\\u00a0[http://hdl.handle.net/1912/6420](\\\\http://hdl.handle.net/1912/6420\\\\).\\u00a0DOI:10.1575/1912/6420\n \nRelated Datasets:  \n[ammonium removal by seaweeds](\\\\https://www.bco-dmo.org/dataset/489420\\\\)  \n[filter tracer content](\\\\https://www.bco-dmo.org/dataset/489283\\\\)  \n[natural abundance N and C filter content](\\\\http://www.bco-\ndmo.org/dataset/489310\\\\)  \n[tidepool ammonium and mussels](\\\\https://www.bco-dmo.org/dataset/488860\\\\)\n\ncdm_data_type = Other\nVARIABLES:\nsite (unitless)\n... (10 more variables)\n https://erddap.bco-dmo.org/erddap/metadata/fgdc/xml/bcodmo_dataset_489085_fgdc.xml https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_489085/index.htmlTable https://www.bco-dmo.org/dataset/489085 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_489085.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_489085&showErrors=false&email= BCO-DMO bcodmo_dataset_489085
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_949777_v1 https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_949777_v1/ public [Transcriptomics of Phytoplankton Cultures Grown on Various Phosphorus Sources] - Transcriptomics of phytoplankton cultures grown on various phosphorus sources in a laboratory experiment (Phosphonate Utilization by Eukaryotic Phytoplankton: Who, How, and Where?) A laboratory experiment was carried out to characterize the growth and physiological response of three species of eukaryotic phytoplankton grown with inorganic phosphate (+P), without phosphate (-P), and with methylphosphonate (+MPN) and aminoethylphosphonate (+AEPN) as the sole sources of phosphorus (P). Data reported in this dataset are the transcriptomic reads, in biological triplicate, of these culture growth substrate combinations.\n\ncdm_data_type = Other\nVARIABLES:\nBioProject (unitless)\nBiosample (unitless)\nTreatment (unitless)\nReplicate (unitless)\nOrganism (unitless)\nTax_ID (unitless)\nStrain (unitless)\nURL (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_949777_v1/index.htmlTable https://www.bco-dmo.org/dataset/949777 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_949777_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_949777_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_949777_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774585_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_774585_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_774585_v1/ public [UCYN-A Host activity] - Experimental data testing the N2 and CO2 fixing activity of the UCYN-A/haptophyte symbiosis in nitrate and ammonium rich waters in the California Current from May to October 2017 (Collaborative Research: Biogeochemical significance of the abundant, uncultivated symbiotic cyanobacteria UCYN-A) Experimental data testing the N2 and CO2 fixing activity of the UCYN-A/haptophyte symbiosis in nitrate and ammonium rich waters in the California Current from May to October 2017.\n\ncdm_data_type = Other\nVARIABLES:\nExperiment (unitless)\nCruise (unitless)\nDate (unitless)\nlat (degrees_north)\nlongitude (degrees_east)\nTreatment (unitless)\nn (count)\niso_sub (unitless)\nbulk_fix_uptake_rate_bulk_avg (micromole Nitrogen per meter cubed per day (umol N/m3/d))\nbulk_fix_uptake_rate_bulk_sd (micromole Nitrogen per meter cubed per day (umol N/m3/d))\nC_fix_rate_bulk_avg (millimole Carbon per meter cubed per day (mmolC/m3/d))\nC_fix_rate_bulk_sd (millimole Carbon per meter cubed per day (mmolC/m3/d))\nLOD_bulk (umol N/m3/d or mmolC/m3/d depending on column it references)\nMQR_bulk (umol N/m3/d or mmolC/m3/d depending on column it references)\nsheet (unitless)\nchl_a_n (count)\nchla_avg (micrograms per liter (ug/L))\nchla_sd (micrograms per liter (ug/L))\nPON_n (count)\nPON_avg (micromole per liter (umol/L))\nPON_sd (micromole per liter (umol/L))\nPOC_n (count)\nPOC_avg (micromole per liter (umol/L))\nPOC_sd (micromole per liter (umol/L))\nSublineage (unitless)\nsub_enrich_atom_pcnt (percent)\n... (10 more variables)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_774585_v1/index.htmlTable https://www.bco-dmo.org/dataset/774585 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_774585_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_774585_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_774585_v1
log in [Urchin and Abalone Density Responses] - Urchin and abalone density responses to caged Pycnopodia field experiment in Sitka Sound urchin barrens, February 2023 from from February 2023 (High latitude kelp dynamics project) (CAREER: Energy fluxes and community stability in a dynamic, high-latitude kelp ecosystem) We conducted a field experiment in three replicate sea urchin barrens in Sitka Sound, AK (57°2'1\"N 135°15'51\"W) in February of 2023, where we deployed kelp blades at discrete distances on four meter radial cables from caged adult P. helianthoides and control cages for 24 hours. Via SCUBA we performed quadrat density surveys of three important kelp forest grazers (Haliotis kamtschatkana, Strongylocentrotus droebachiensis, and Mesocentrotus franciscanus) at discrete distances from the cage before, 15-30 min after, and 24 hours after P. helianthoides were added to the treatment cages.\n\ncdm_data_type = Other\nVARIABLES:\nQuadID (unitless)\nRayID (unitless)\nSite (unitless)\nlatitude (degrees_north)\nlongitude (Long, degrees_east)\nTreatment (unitless)\nReplicate (unitless)\nTreatRep (unitless)\nRay (unitless)\nDate (unitless)\nDiver (unitless)\nSurvey (unitless)\nTimePoint (units needed)\nHoursElapsed (hours)\ndepth_f (Depth_ft, feet (ft))\ndepth (Depth_m, m)\nQuad (unitless)\nDist_m (meters (m))\nSpecies (unitless)\nCount (individual)\nDensity_m2 (meters squared (m2))\nNotes (unitless)\n BCO-DMO bcodmo_dataset_942725_v1
https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_894148_v1 https://erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_894148_v1.graph https://erddap.bco-dmo.org/erddap/files/bcodmo_dataset_894148_v1/ public [Whelk-Barnacle Predation Experiments] - Results from mesocosm experiments measuring how temperature affects predation rates by whelks on barnacles (The Role of Temperature in Regulating Herbivory and Algal Biomass in Upwelling Systems) These data contain results from mesocosm experiments measuring how temperature affects predation rates by whelks on barnacles. These results include barnacles eaten and whelk movements under warm and cold conditions. The experiments were done in the Galapagos Science Center in San Cristobal, Galapagos.  Estimates of how temperature modifies activity and predation rates will help understand and predict changes in marine communities under future climate change scenarios.\n\ncdm_data_type = Other\nVARIABLES:\nDay_of_Week (unitless)\nISO_DateTime_Local (unitless)\ntime (Iso_datetime_utc, seconds since 1970-01-01T00:00:00Z)\nAquarium (unitless)\nTreatment (unitless)\nTemperature (degrees Celsius)\nPosition_of_Whelk (unitless)\nWhelkPosition (unitless)\nDeadControl (unitless)\nDeadPrey (unitless)\nPreyEaten (unitless)\nNote (unitless)\n https://erddap.bco-dmo.org/erddap/info/bcodmo_dataset_894148_v1/index.htmlTable https://www.bco-dmo.org/dataset/894148 (external link) https://erddap.bco-dmo.org/erddap/rss/bcodmo_dataset_894148_v1.rss https://erddap.bco-dmo.org/erddap/subscriptions/add.html?datasetID=bcodmo_dataset_894148_v1&showErrors=false&email= BCO-DMO bcodmo_dataset_894148_v1

 
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