BCO-DMO ERDDAP
Accessing BCO-DMO data
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Row Type Variable Name Attribute Name Data Type Value
attribute NC_GLOBAL access_formats String .htmlTable,.csv,.json,.mat,.nc,.tsv,.esriCsv,.geoJson
attribute NC_GLOBAL acquisition_description String Dissections and sampling were performed of the gills, external surface, and\ngastrointestinal tract of lionfish and several ecologically similar species at\neach location, focusing on macroparasitic fauna (trematodes, cestodes,\nnematodes, monogeneans, copepods, etc.).\n \nDescription of values in 'parasite' column:  \n gut_digenean = dignean parasites found in the gastrointestinal tract of the\nhost.  \n gut_cestode = cestode parasites found in the gastrointestinal tract of the\nhost.  \n gut_nematode = nematode parasites found in the gastrointestinal tract of the\nhost.  \n gut_didymozoid = didymozoid parasites found in the gastrointestinal tract of\nthe host.  \n gut_acanthocephalan = acanthocephalan parasites found in the\ngastrointestinal tract of the host.  \n gut_metazoan = metazoan parasites found in the gastrointestinal tract of the\nhost.  \n gut_other = all other (unidentified) parasites found in the gastrointestinal\ntract of the host.  \n heart_didymozoid = didymozoid parasites found in the host heart.  \n gill_monogenean = monogenean parasites found in the anterior two gill arches\nof each side of the host.  \n gill_copepod = copepod parasites found in the anterior two gill arches of\neach side of the host.  \n gill_isopod = isopod parasites found in the anterior two gill arches of each\nside of the host.  \n gill_other = all other (unidentified) parasites found in the anterior two\ngill arches of each side of the host.  \n skin_didymozoid = didymozoid parasites found on the external surface of the\nhost, as sampled by a freshwater bath in the ectoparasites dislodge via\nosmotic pressure.  \n skin_monogenean = monogenean parasites found on the external surface of the\nhost, as sampled by a freshwater bath in the ectoparasites dislodge via\nosmotic pressure.  \n skin_copepod = copepod parasites found on the external surface of the host,\nas sampled by a freshwater bath in the ectoparasites dislodge via osmotic\npressure.  \n skin_isopod = isopod parasites found on the external surface of the host, as\nsampled by a freshwater bath in the ectoparasites dislodge via osmotic\npressure.  \n skin_other = all other (unidentified) parasites found on the external\nsurface of the host, as sampled by a freshwater bath in the ectoparasites\ndislodge via osmotic pressure.
attribute NC_GLOBAL awards_0_award_nid String 55160
attribute NC_GLOBAL awards_0_award_number String OCE-0851162
attribute NC_GLOBAL awards_0_data_url String http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=0851162 (external link)
attribute NC_GLOBAL awards_0_funder_name String NSF Division of Ocean Sciences
attribute NC_GLOBAL awards_0_funding_acronym String NSF OCE
attribute NC_GLOBAL awards_0_funding_source_nid String 355
attribute NC_GLOBAL awards_0_program_manager String David L. Garrison
attribute NC_GLOBAL awards_0_program_manager_nid String 50534
attribute NC_GLOBAL cdm_data_type String Other
attribute NC_GLOBAL comment String Lionfish Parasites 2009-2011 \n (From sub-project \"Lionfish Parasites 2009-2011\") \n Lead PI: Mark Hixon (OSU) \n Sub-Project Lead: Paul C. Sikkel (Arkansas State U.) \n Version: 03 April 2013
attribute NC_GLOBAL Conventions String COARDS, CF-1.6, ACDD-1.3
attribute NC_GLOBAL creator_email String info at bco-dmo.org
attribute NC_GLOBAL creator_name String BCO-DMO
attribute NC_GLOBAL creator_type String institution
attribute NC_GLOBAL creator_url String https://www.bco-dmo.org/ (external link)
attribute NC_GLOBAL data_source String extract_data_as_tsv version 2.3  19 Dec 2019
attribute NC_GLOBAL date_created String 2013-03-15T15:24:40Z
attribute NC_GLOBAL date_modified String 2019-10-28T17:25:12Z
attribute NC_GLOBAL defaultDataQuery String &time<now
attribute NC_GLOBAL doi String 10.1575/1912/bco-dmo.3894.1
attribute NC_GLOBAL Easternmost_Easting double 144.66638
attribute NC_GLOBAL geospatial_lat_max double 23.807317
attribute NC_GLOBAL geospatial_lat_min double 9.12427
attribute NC_GLOBAL geospatial_lat_units String degrees_north
attribute NC_GLOBAL geospatial_lon_max double 144.66638
attribute NC_GLOBAL geospatial_lon_min double -80.1036
attribute NC_GLOBAL geospatial_lon_units String degrees_east
attribute NC_GLOBAL infoUrl String https://www.bco-dmo.org/dataset/3894 (external link)
attribute NC_GLOBAL institution String BCO-DMO
attribute NC_GLOBAL keywords String abundance, bco, bco-dmo, biological, chemical, data, dataset, date, dmo, erddap, fish, fish_id, latitude, len, len_tot, longitude, management, month, notes, oceanography, office, parasite, preliminary, site, species, tot, weight, year
attribute NC_GLOBAL license String https://www.bco-dmo.org/dataset/3894/license (external link)
attribute NC_GLOBAL metadata_source String https://www.bco-dmo.org/api/dataset/3894 (external link)
attribute NC_GLOBAL Northernmost_Northing double 23.807317
attribute NC_GLOBAL param_mapping String {'3894': {'lat': 'master - latitude', 'lon': 'master - longitude'}}
attribute NC_GLOBAL parameter_source String https://www.bco-dmo.org/mapserver/dataset/3894/parameters (external link)
attribute NC_GLOBAL people_0_affiliation String Oregon State University
attribute NC_GLOBAL people_0_affiliation_acronym String OSU
attribute NC_GLOBAL people_0_person_name String Mark Hixon
attribute NC_GLOBAL people_0_person_nid String 51647
attribute NC_GLOBAL people_0_role String Principal Investigator
attribute NC_GLOBAL people_0_role_type String originator
attribute NC_GLOBAL people_1_affiliation String Arkansas State University
attribute NC_GLOBAL people_1_person_name String Paul C. Sikkel
attribute NC_GLOBAL people_1_person_nid String 51665
attribute NC_GLOBAL people_1_role String Scientist
attribute NC_GLOBAL people_1_role_type String originator
attribute NC_GLOBAL people_2_affiliation String Oregon State University
attribute NC_GLOBAL people_2_affiliation_acronym String OSU
attribute NC_GLOBAL people_2_person_name String Lillian  J Tuttle
attribute NC_GLOBAL people_2_person_nid String 51662
attribute NC_GLOBAL people_2_role String Scientist
attribute NC_GLOBAL people_2_role_type String originator
attribute NC_GLOBAL people_3_affiliation String Woods Hole Oceanographic Institution
attribute NC_GLOBAL people_3_affiliation_acronym String WHOI BCO-DMO
attribute NC_GLOBAL people_3_person_name String Shannon Rauch
attribute NC_GLOBAL people_3_person_nid String 51498
attribute NC_GLOBAL people_3_role String BCO-DMO Data Manager
attribute NC_GLOBAL people_3_role_type String related
attribute NC_GLOBAL project String Lionfish Invasion
attribute NC_GLOBAL projects_0_acronym String Lionfish Invasion
attribute NC_GLOBAL projects_0_description String Invasive species are increasingly introduced by human activities to new regions of the world where those species have never existed previously. In the absence of natural enemies (predators, competitors, and diseases) from their homeland, invasives may have strong negative effects on invaded ecosystems, especially systems with fewer species (\"ecological release\"), and may even drive native species extinct. However, if native natural enemies can somehow control the invaders (\"ecological resistance\"), then ecological disruption can be prevented or at least moderated. Most of the many invasive species in the sea have been seaweeds and invertebrates, and the few documented invasive marine fishes have not caused major problems. However, this situation has recently changed in a stunning and ominous way. In the early 1990s, lionfish (Pterois volitans) from the Pacific Ocean were accidentally or intentionally released from aquaria to the ocean in the vicinity of Florida. Camouflaged by shape and color, protected by venomous spines, consuming native coral-reef fishes voraciously, and reproducing rapidly, lionfish have subsequently undergone a population explosion. They now range from the mid-Atlantic coast of the US to the Caribbean, including the Bahamas. Native Atlantic fishes have never before encountered this spiny, stealthy, efficient predator and seldom take evasive action. In fact, the investigator has documented that a single lionfish is capable of reducing the abundance of small fish on a small coral patch reef by nearly 80% in just 5 weeks. There is great concern that invasive lionfish may severely reduce the abundance of native coral-reef fishes important as food for humans (e.g., grouper and snapper in their juvenile stages) as well as species that normally maintain the integrity of coral reefs (e.g., grazing parrotfishes that can prevent seaweeds from smothering corals). There are far more species of coral-reef fish in the Pacific than the Atlantic, so this invasion may represent a case of extreme ecological release with minor ecological resistance. Dr. Hixon and colleagues will study the mechanisms of ecological release in lionfish, as well as examine potential sources of ecological resistance in the heavily invaded Bahamas. Because very little is known about the ecology and behavior of lionfish in their native Pacific range, he will also conduct comparative studies in both oceans, which may provide clues regarding the extreme success of this invasion. In the Bahamas, the investigator will document the direct and indirect effects on native species of the ecological release of lionfish, both as a predator and as a competitor. These studies will be conducted at various scales of time and space, from short-term experiments on small patch reefs, to long-term experiments and observations on large reefs. Whereas direct effects involve mostly changes in the abundance of native species, indirect effects can be highly variable. For example, lionfish may actually indirectly benefit some native species by either consuming or outcompeting the competitors of those natives. The project will explore possible ecological resistance to the invasion by determining whether any native Bahamian species are effective natural enemies of lionfish, including predators, parasites, and competitors of both juvenile and adult lionfish. Comparative studies of natural enemies, as well as lionfish ecology and behavior, in both the Atlantic and the Pacific may provide clues regarding the explosive spread of lionfish in the Atlantic.\nRegarding broader impacts, this basic research will provide information valuable to coral-reef and fisheries managers fighting the lionfish invasion in the US, the Bahamas, and the greater Caribbean, especially if sources of native ecological resistance are identified. The study will fund the PhD research of U.S. graduate students, as well as involve assistance and participation by a broad variety of undergraduates and reef/fisheries managers, including women, minorities, native Bahamians, and native Pacific islanders. Participation in this project will promote education in marine ecology and conservation biology directly via Dr. Hixon's and graduate students' teaching and outreach activities, and indirectly via the experiences of undergraduate field assistants and various associates.
attribute NC_GLOBAL projects_0_end_date String 2012-11
attribute NC_GLOBAL projects_0_geolocation String Bahamas; Cayman Islands; Mariana Islands; Philippines
attribute NC_GLOBAL projects_0_name String Ecological Release and Resistance at Sea: Invasion of Atlantic Coral Reefs by Pacific Lionfish
attribute NC_GLOBAL projects_0_project_nid String 2256
attribute NC_GLOBAL projects_0_project_website String http://hixon.science.oregonstate.edu/content/highlight-lionfish-invasion (external link)
attribute NC_GLOBAL projects_0_start_date String 2009-06
attribute NC_GLOBAL publisher_name String Biological and Chemical Oceanographic Data Management Office (BCO-DMO)
attribute NC_GLOBAL publisher_type String institution
attribute NC_GLOBAL sourceUrl String (local files)
attribute NC_GLOBAL Southernmost_Northing double 9.12427
attribute NC_GLOBAL standard_name_vocabulary String CF Standard Name Table v55
attribute NC_GLOBAL summary String Results of an investigation of parasite communities infecting lionfish (Pterois volitans) in their native range, Guam and the Philippines, and in their invaded range, the Bahamas and the Cayman Islands.
attribute NC_GLOBAL title String [lionfish parasites] - Results of an investigation of parasite communities infecting lionfish (Pterois volitans) in their native range, Guam and the Philippines, and in their invaded range, the Bahamas and the Cayman Islands (Ecological Release and Resistance at Sea: Invasion of Atlantic Coral Reefs by Pacific Lionfish)
attribute NC_GLOBAL version String 1
attribute NC_GLOBAL Westernmost_Easting double -80.1036
attribute NC_GLOBAL xml_source String osprey2erddap.update_xml() v1.3
variable location String
attribute location bcodmo_name String site_descrip
attribute location description String Regional location where trial was conducted (Lee Stocking Island, Little Cayman, or the Philippines).
attribute location long_name String Location
attribute location units String text
variable site String
attribute site bcodmo_name String site
attribute site description String Name of reef on which fish was collected.
attribute site long_name String Site
attribute site units String text
variable latitude double
attribute latitude _CoordinateAxisType String Lat
attribute latitude _FillValue double NaN
attribute latitude actual_range double 9.12427, 23.807317
attribute latitude axis String Y
attribute latitude bcodmo_name String latitude
attribute latitude colorBarMaximum double 90.0
attribute latitude colorBarMinimum double -90.0
attribute latitude description String Latitude of site.
attribute latitude ioos_category String Location
attribute latitude long_name String Latitude
attribute latitude nerc_identifier String https://vocab.nerc.ac.uk/collection/P09/current/LATX/ (external link)
attribute latitude standard_name String latitude
attribute latitude units String degrees_north
variable longitude double
attribute longitude _CoordinateAxisType String Lon
attribute longitude _FillValue double NaN
attribute longitude actual_range double -80.1036, 144.66638
attribute longitude axis String X
attribute longitude bcodmo_name String longitude
attribute longitude colorBarMaximum double 180.0
attribute longitude colorBarMinimum double -180.0
attribute longitude description String Longitude of site.
attribute longitude ioos_category String Location
attribute longitude long_name String Longitude
attribute longitude nerc_identifier String https://vocab.nerc.ac.uk/collection/P09/current/LONX/ (external link)
attribute longitude standard_name String longitude
attribute longitude units String degrees_east
variable species String
attribute species bcodmo_name String species
attribute species description String Host species.
attribute species long_name String Species
attribute species units String text
variable fish_id String
attribute fish_id bcodmo_name String sample
attribute fish_id description String Specific identification code for individual of host species. (Originally called 'Specimen ID').
attribute fish_id long_name String Fish Id
attribute fish_id nerc_identifier String https://vocab.nerc.ac.uk/collection/P02/current/ACYC/ (external link)
attribute fish_id units String dimensionless
variable len_tot float
attribute len_tot _FillValue float NaN
attribute len_tot actual_range float 6.8, 34.7
attribute len_tot bcodmo_name String length
attribute len_tot description String Total length in centimeters of the host.
attribute len_tot long_name String Len Tot
attribute len_tot units String cm
variable weight float
attribute weight _FillValue float NaN
attribute weight actual_range float 0.046, 44.14
attribute weight bcodmo_name String weight
attribute weight description String Mass in kilograms of the host.
attribute weight long_name String Weight
attribute weight units String kg
variable date String
attribute date bcodmo_name String date
attribute date description String Date on which trial was conducted.
attribute date long_name String Date
attribute date nerc_identifier String https://vocab.nerc.ac.uk/collection/P01/current/ADATAA01/ (external link)
attribute date units String dimensionless
variable month String
attribute month bcodmo_name String month
attribute month description String 2-digit month during which trial was conducted.
attribute month long_name String Month
attribute month nerc_identifier String https://vocab.nerc.ac.uk/collection/P01/current/MNTHXXXX/ (external link)
attribute month units String mm (01 to 12)
variable year short
attribute year _FillValue short 32767
attribute year actual_range short 2009, 2011
attribute year bcodmo_name String year
attribute year description String 4-digit year during which trial was conducted in YYYY format.
attribute year long_name String Year
attribute year nerc_identifier String https://vocab.nerc.ac.uk/collection/P01/current/YEARXXXX/ (external link)
attribute year units String unitless
variable notes String
attribute notes bcodmo_name String comment
attribute notes description String Other noteworthy observations.
attribute notes long_name String Notes
attribute notes units String text
variable parasite String
attribute parasite bcodmo_name String unknown
attribute parasite description String Name and location of the parasite found in or on the host. See 'Acquisition Description' for detailed descriptions.
attribute parasite long_name String Parasite
attribute parasite units String text
variable abundance byte
attribute abundance _FillValue byte 127
attribute abundance actual_range byte 0, 84
attribute abundance bcodmo_name String number
attribute abundance description String Total number of the specified parasites found on or in the host.
attribute abundance long_name String Abundance
attribute abundance units String integer

 
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