BCO-DMO ERDDAP
Accessing BCO-DMO data
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Row Type Variable Name Attribute Name Data Type Value
attribute NC_GLOBAL access_formats String .htmlTable,.csv,.json,.mat,.nc,.tsv
attribute NC_GLOBAL acquisition_description String To determine the effect of fish age and size on the endurance of larvae from\nhatching through the onset of settlement, we evaluated the swimming duration\nof A. percula larvae at 0, 4, and 8 dph (day post hatch), and of E. lori and\nE. colini at 0, 10, 20, and 30 dph. At the start of each trial, an individual\nlarva was acclimated to the flume for 2 min with water flowing at a velocity\nof < 1 cm s-1. If the larva displayed normal orientation and swimming behavior\nduring acclimation, then the velocity was increased to a fixed setting of 2,\n4, 6, 8 or 10 cm s-1. Swimming duration was recorded as the total time that a\nlarva swam before being expelled from the flume or collected on the back mesh,\nminus the 2 min acclimation period. At slower flow velocities (2 \\u2013 4 cm\ns-1), some late-stage larvae (i.e., A. percula: 8 dph; Elacatinus spp.: 30\ndph) chose to settle on the bottom rather than swim in the water column and\nwere therefore removed from the data set.
attribute NC_GLOBAL awards_0_award_nid String 651264
attribute NC_GLOBAL awards_0_award_number String OCE-1459546
attribute NC_GLOBAL awards_0_data_url String http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1459546 (external link)
attribute NC_GLOBAL awards_0_funder_name String NSF Division of Ocean Sciences
attribute NC_GLOBAL awards_0_funding_acronym String NSF OCE
attribute NC_GLOBAL awards_0_funding_source_nid String 355
attribute NC_GLOBAL awards_0_program_manager String Michael E. Sieracki
attribute NC_GLOBAL awards_0_program_manager_nid String 50446
attribute NC_GLOBAL cdm_data_type String Other
attribute NC_GLOBAL comment String Swimming Endurance \n  P. Buston and J. Majoris, PIs \n  Version 22 June 2018
attribute NC_GLOBAL Conventions String COARDS, CF-1.6, ACDD-1.3
attribute NC_GLOBAL creator_email String info at bco-dmo.org
attribute NC_GLOBAL creator_name String BCO-DMO
attribute NC_GLOBAL creator_type String institution
attribute NC_GLOBAL creator_url String https://www.bco-dmo.org/ (external link)
attribute NC_GLOBAL data_source String extract_data_as_tsv version 2.3  19 Dec 2019
attribute NC_GLOBAL date_created String 2018-06-22T18:23:19Z
attribute NC_GLOBAL date_modified String 2018-08-02T18:59:48Z
attribute NC_GLOBAL defaultDataQuery String &amp;time&lt;now
attribute NC_GLOBAL doi String 10.1575/1912/bco-dmo.739171.1
attribute NC_GLOBAL infoUrl String https://www.bco-dmo.org/dataset/739171 (external link)
attribute NC_GLOBAL institution String BCO-DMO
attribute NC_GLOBAL instruments_0_dataset_instrument_description String Used to analyze fish swimming behavior
attribute NC_GLOBAL instruments_0_dataset_instrument_nid String 739178
attribute NC_GLOBAL instruments_0_description String A tool used to analyze and quantify fish swimming behavior, physiology, and performance.
attribute NC_GLOBAL instruments_0_instrument_name String Swimming Flume
attribute NC_GLOBAL instruments_0_instrument_nid String 739157
attribute NC_GLOBAL instruments_0_supplied_name String Custom designed swimming flume
attribute NC_GLOBAL keywords String batch, batch_id, bco, bco-dmo, biological, chemical, data, dataset, date, dist, dist_cm, dmo, dph, erddap, management, oceanography, office, preliminary, sec, species, speed, stand, stand_dph, time, time_sec
attribute NC_GLOBAL license String https://www.bco-dmo.org/dataset/739171/license (external link)
attribute NC_GLOBAL metadata_source String https://www.bco-dmo.org/api/dataset/739171 (external link)
attribute NC_GLOBAL param_mapping String {'739171': {}}
attribute NC_GLOBAL parameter_source String https://www.bco-dmo.org/mapserver/dataset/739171/parameters (external link)
attribute NC_GLOBAL people_0_affiliation String Boston University
attribute NC_GLOBAL people_0_affiliation_acronym String BU
attribute NC_GLOBAL people_0_person_name String Dr Peter Buston
attribute NC_GLOBAL people_0_person_nid String 544437
attribute NC_GLOBAL people_0_role String Principal Investigator
attribute NC_GLOBAL people_0_role_type String originator
attribute NC_GLOBAL people_1_affiliation String Boston University
attribute NC_GLOBAL people_1_affiliation_acronym String BU
attribute NC_GLOBAL people_1_person_name String Dr John Majoris
attribute NC_GLOBAL people_1_person_nid String 728439
attribute NC_GLOBAL people_1_role String Co-Principal Investigator
attribute NC_GLOBAL people_1_role_type String originator
attribute NC_GLOBAL people_2_affiliation String Boston University
attribute NC_GLOBAL people_2_affiliation_acronym String BU
attribute NC_GLOBAL people_2_person_name String Dr John Majoris
attribute NC_GLOBAL people_2_person_nid String 728439
attribute NC_GLOBAL people_2_role String Contact
attribute NC_GLOBAL people_2_role_type String related
attribute NC_GLOBAL people_3_affiliation String Woods Hole Oceanographic Institution
attribute NC_GLOBAL people_3_affiliation_acronym String WHOI BCO-DMO
attribute NC_GLOBAL people_3_person_name String Hannah Ake
attribute NC_GLOBAL people_3_person_nid String 650173
attribute NC_GLOBAL people_3_role String BCO-DMO Data Manager
attribute NC_GLOBAL people_3_role_type String related
attribute NC_GLOBAL project String Elacatinus Dispersal II
attribute NC_GLOBAL projects_0_acronym String Elacatinus Dispersal II
attribute NC_GLOBAL projects_0_description String Description from NSF award abstract:\nUnderstanding how far young fish move away from their parents is a major goal of marine ecology because this dispersal can make connections between distinct populations and thus influence population size and dynamics. Understanding the drivers of population dynamics is, in turn, essential for effective fisheries management. Marine ecologists have used two different approaches to understand how fish populations are connected: genetic methods that measure connectivity and oceanographic models that predict connectivity. There is, however, a mismatch between the predictions of oceanographic models and the observations of genetic methods. It is thought that this mismatch is caused by the behavior of the young, or larval, fish. The objective of this research is to study the orientation capabilities of larval fish in the wild throughout development and under a variety of environmental conditions to see if the gap between observations and predictions of population connectivity can be resolved. The project will have broader impacts in three key areas: integration of research and teaching by training young scientists at multiple levels; broadening participation of undergraduates from underrepresented groups; and wide dissemination of results through development of a website with information and resources in English and Spanish.\nThe overall objective of the research is to investigate the role of larval orientation behavior throughout ontogeny in determining population connectivity. This will be done using the neon goby, Elacatinus lori, as a model system in Belize. The choice of study system is motivated by the fact that direct genetic methods have already been used to describe the complete dispersal kernel for this species, and these observations indicate that dispersal is less extensive than predicted by a high-resolution biophysical model; E. lori can be reared in the lab from hatching to settlement providing a reliable source of larvae of all ages for proposed experiments; and a new, proven behavioral observation platform, the Drifting In Situ Chamber (DISC), allows measurements of larval orientation behavior in open water. The project has three specific objectives: to understand ontogenetic changes in larval orientation capabilities by correlating larval orientation behavior with developmental sensory anatomy; to analyze variation in the precision of larval orientation in different environmental contexts through ontogeny; and to test alternative hypotheses for the goal of larval orientation behavior, i.e., to determine where larvae are heading as they develop.
attribute NC_GLOBAL projects_0_end_date String 2018-04
attribute NC_GLOBAL projects_0_geolocation String Belizean Barrier Reef System
attribute NC_GLOBAL projects_0_name String Collaborative Research: The Role of Larval Orientation Behavior in Determining Population Connectivity
attribute NC_GLOBAL projects_0_project_nid String 651265
attribute NC_GLOBAL projects_0_start_date String 2015-05
attribute NC_GLOBAL publisher_name String Biological and Chemical Oceanographic Data Management Office (BCO-DMO)
attribute NC_GLOBAL publisher_type String institution
attribute NC_GLOBAL sourceUrl String (local files)
attribute NC_GLOBAL standard_name_vocabulary String CF Standard Name Table v55
attribute NC_GLOBAL summary String Recorded swimming duration of larval Amphiprion percula, Elacatinus lori, and Elacatinus colini measured throughout development from hatching through settlement.
attribute NC_GLOBAL title String [Swimming Endurance] - Ontogeny of swimming endurance of larval Amphiprion percula, Elacatinus lori, and Elacatinus colini from Belize in 2015. (Collaborative Research: The Role of Larval Orientation Behavior in Determining Population Connectivity)
attribute NC_GLOBAL version String 1
attribute NC_GLOBAL xml_source String osprey2erddap.update_xml() v1.3
variable date String
attribute date bcodmo_name String date
attribute date description String Date of swim trial; yyyy/mm/dd
attribute date long_name String Date
attribute date nerc_identifier String https://vocab.nerc.ac.uk/collection/P01/current/ADATAA01/ (external link)
attribute date source_name String date
attribute date time_precision String 1970-01-01
attribute date units String unitless
variable location String
attribute location bcodmo_name String site
attribute location description String Indicates whether trials were completed in the lab at Boston University or in the field in Belize.
attribute location long_name String Location
attribute location units String unitless
variable species String
attribute species bcodmo_name String species
attribute species description String Reef fish species
attribute species long_name String Species
attribute species units String unitless
variable batch_id String
attribute batch_id bcodmo_name String sample_descrip
attribute batch_id description String Unique label indicating clutch or batch identity
attribute batch_id long_name String Batch Id
attribute batch_id units String unitless
variable dph byte
attribute dph _FillValue byte 127
attribute dph actual_range byte 0, 30
attribute dph bcodmo_name String days
attribute dph description String Age in days post hatch
attribute dph long_name String DPH
attribute dph units String days post hatch
variable stand_dph float
attribute stand_dph _FillValue float NaN
attribute stand_dph actual_range float 0.0, 1.0
attribute stand_dph bcodmo_name String age
attribute stand_dph description String A larva's age/the expected age at settlement for each species (i.e. 30 days post hatch (dph) for Elacatinus, 8 dph for A. percula).
attribute stand_dph long_name String Stand Dph
attribute stand_dph units String percent
variable speed byte
attribute speed _FillValue byte 127
attribute speed actual_range byte 2, 10
attribute speed bcodmo_name String unknown
attribute speed description String Flow rate during the trial
attribute speed long_name String Speed
attribute speed units String centimeters per second
variable time_sec int
attribute time_sec _FillValue int 2147483647
attribute time_sec actual_range int 0, 908460
attribute time_sec bcodmo_name String duration
attribute time_sec description String A larva's swimming duration in seconds
attribute time_sec long_name String Time Sec
attribute time_sec units String seconds
variable dist_cm int
attribute dist_cm _FillValue int 2147483647
attribute dist_cm actual_range int 0, 6411600
attribute dist_cm bcodmo_name String transect
attribute dist_cm description String The equivalent distance a larva swam
attribute dist_cm long_name String Dist Cm
attribute dist_cm units String centimeters
variable TL float
attribute TL _FillValue float NaN
attribute TL actual_range float 3.0, 11.93
attribute TL bcodmo_name String unknown
attribute TL description String Total length
attribute TL long_name String TL
attribute TL units String milimeters
variable SL float
attribute SL _FillValue float NaN
attribute SL actual_range float 2.83, 10.71
attribute SL bcodmo_name String unknown
attribute SL description String Standard length
attribute SL long_name String SL
attribute SL units String milimeters
variable BD float
attribute BD _FillValue float NaN
attribute BD actual_range float 0.37, 2.29
attribute BD bcodmo_name String width
attribute BD description String Body depth
attribute BD long_name String BD
attribute BD units String milimeters
variable PA float
attribute PA _FillValue float NaN
attribute PA actual_range float 0.62, 13.65
attribute PA bcodmo_name String transect
attribute PA description String Propulsive area
attribute PA long_name String PA
attribute PA units String milimeters

 
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