BCO-DMO ERDDAP
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Row Type Variable Name Attribute Name Data Type Value
attribute NC_GLOBAL access_formats String .htmlTable,.csv,.json,.mat,.nc,.tsv
attribute NC_GLOBAL acquisition_description String We observed the behavior of individual crabs in situ. In each habitat, we\ncollected groups of five adult A. pisonii by hand and determined the sex and\ncarapace width (to the nearest 0.1mm) of each individual. The groups of crabs\nwere made up of the first five individuals that we encountered and could\ncapture and were drawn from all accessible habitat. We then painted the\ncarapace of each crab an identifying color with nail polish to aid in\nidentification and visibility. Following a short period of observation to\nensure normal behavior, we released the crabs onto a single tree within 10 m\nof the collection tree of all individuals (mangrove), onto separate S.\nalterniflora stalks within 10 m of the area of collection (saltmarsh), or onto\nthe same piling (dock) of the dock where all individuals were captured.\nRelease in the saltmarsh occurred during the rising tide when the crabs had no\naccess to the sediment.\n \nWe observed crabs in the mangrove and saltmarsh habitats from the time they\nlost access to the sediment until the receding tide once again allowed access\nto the sediment (~6h depending on site and day). In contrast, we observed\ncrabs on docks from three hours before slack high tide until three hours after\nslack high tide. The total time of observation, in minutes, was recorded. We\nwatched crabs from a distance using binoculars and monitored the individuals\ncontinuously throughout the observational period. The every five minutes, or\nat every change in location, the location of the crab in sun or shade was\nnoted.\n \nThe proportions of time crabs were observed to spend in the sun, shade,\nand\\u00a0 not visible were calculated as the total minutes the crab spent in\neach location divided by the total duration of the observational period in\nminutes.\n \nLocations:  \n Florida East Coast:  \n Round Island Park: 27o33'33\\\"N 80o19'53\\\"W  \n Pepper Park: 27o29'42'N 80o18'12\\\"W  \n Bear Point: 27o25'48\\\"N 80o17'10\\\"W  \n North Causeway Park: 27o28'28\\\"N 80o19'12\\\"W  \n Oslo Road: 27o35'14\\\"N 80o21'55\\\"W  \n Anastasia State Park: 29o52'40\\\"N 81o16'32\\\"W  \n Guana-Tolomato-Matanzas NERR: 30o0'49\\\"N 81o20'42\\\"W  \n Palm Valley/Nocatee Canoe Launch: 30o07'57\\\"N 81o23'08\\\"W  \n St. Augustine Yacht Club: 29o53'09\\\"N 81o17'08\\\"W\\u00a0
attribute NC_GLOBAL awards_0_award_nid String 562103
attribute NC_GLOBAL awards_0_award_number String OCE-1129166
attribute NC_GLOBAL awards_0_data_url String http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1129166 (external link)
attribute NC_GLOBAL awards_0_funder_name String NSF Division of Ocean Sciences
attribute NC_GLOBAL awards_0_funding_acronym String NSF OCE
attribute NC_GLOBAL awards_0_funding_source_nid String 355
attribute NC_GLOBAL awards_0_program_manager String David L. Garrison
attribute NC_GLOBAL awards_0_program_manager_nid String 50534
attribute NC_GLOBAL cdm_data_type String Other
attribute NC_GLOBAL comment String Proportion of time A. pisonii spent in sun and shade \n   B. Griffen, Z. Cannizzo \n   version: 2018-07-16
attribute NC_GLOBAL Conventions String COARDS, CF-1.6, ACDD-1.3
attribute NC_GLOBAL creator_email String info at bco-dmo.org
attribute NC_GLOBAL creator_name String BCO-DMO
attribute NC_GLOBAL creator_type String institution
attribute NC_GLOBAL creator_url String https://www.bco-dmo.org/ (external link)
attribute NC_GLOBAL data_source String extract_data_as_tsv version 2.3  19 Dec 2019
attribute NC_GLOBAL date_created String 2018-07-23T19:14:08Z
attribute NC_GLOBAL date_modified String 2019-12-04T13:34:37Z
attribute NC_GLOBAL defaultDataQuery String &time<now
attribute NC_GLOBAL doi String 10.1575/1912/bco-dmo.741059.1
attribute NC_GLOBAL infoUrl String https://www.bco-dmo.org/dataset/741059 (external link)
attribute NC_GLOBAL institution String BCO-DMO
attribute NC_GLOBAL keywords String bco, bco-dmo, biological, chemical, data, dataset, date, dmo, erddap, habitat, invisible, iso, management, oceanography, office, preliminary, shade, site, sun, time, totduration, year
attribute NC_GLOBAL license String https://www.bco-dmo.org/dataset/741059/license (external link)
attribute NC_GLOBAL metadata_source String https://www.bco-dmo.org/api/dataset/741059 (external link)
attribute NC_GLOBAL param_mapping String {'741059': {}}
attribute NC_GLOBAL parameter_source String https://www.bco-dmo.org/mapserver/dataset/741059/parameters (external link)
attribute NC_GLOBAL people_0_affiliation String University of South Carolina
attribute NC_GLOBAL people_0_person_name String Dr Blaine D. Griffen
attribute NC_GLOBAL people_0_person_nid String 562106
attribute NC_GLOBAL people_0_role String Principal Investigator
attribute NC_GLOBAL people_0_role_type String originator
attribute NC_GLOBAL people_1_affiliation String University of South Carolina
attribute NC_GLOBAL people_1_person_name String Zachary J. Cannizzo
attribute NC_GLOBAL people_1_person_nid String 740019
attribute NC_GLOBAL people_1_role String Co-Principal Investigator
attribute NC_GLOBAL people_1_role_type String originator
attribute NC_GLOBAL people_2_person_name String Zachary J. Cannizzo
attribute NC_GLOBAL people_2_person_nid String 740019
attribute NC_GLOBAL people_2_role String Contact
attribute NC_GLOBAL people_2_role_type String related
attribute NC_GLOBAL people_3_affiliation String Woods Hole Oceanographic Institution
attribute NC_GLOBAL people_3_affiliation_acronym String WHOI BCO-DMO
attribute NC_GLOBAL people_3_person_name String Nancy Copley
attribute NC_GLOBAL people_3_person_nid String 50396
attribute NC_GLOBAL people_3_role String BCO-DMO Data Manager
attribute NC_GLOBAL people_3_role_type String related
attribute NC_GLOBAL project String Variation in Metabolic Processes
attribute NC_GLOBAL projects_0_acronym String Variation in Metabolic Processes
attribute NC_GLOBAL projects_0_description String Description from NSF award abstract:\nA major goal of biological and ecological sciences is to understand natural systems well enough to predict how species and populations will respond to a rapidly changing world (i.e., climate change, habitat loss, etc.). A population under any conditions will grow, shrink, or disappear altogether depending on how efficiently individuals consume resources (food), utilize that food metabolically, and eventually reproduce. However, making accurate predictions based on these metabolic processes is complicated by the realities that each species has different resource requirements and that no two individuals within a species are exactly alike. Rather, individuals vary and this variation, both within and across species, is central to many ecological and evolutionary processes. Developing the ability to predict responses of biological systems to a changing world therefore requires a mechanistic understanding of variation. The goal of this project is to improve this mechanistic understanding by examining variation within a metabolic context across a range of species that have a spectrum of commonly-seen resource requirements. Further, the work capitalizes on a unique biological characteristic of this group of species that allows control and manipulation of individual reproduction, facilitating experimental study of the mechanistic links between variation in individual consumption, metabolism, and reproduction. The foundation this research is a combination of field measurements and laboratory experiments using both well-established and newly-developed techniques to quantify these links. The result will be a quantitative framework to predict how individuals will respond reproductively to changes in resource use. Because of the close link between individual reproduction and population dynamics, this research will contribute substantially to predictions in population dynamics under realistic conditions where individuals use more than a single resource, and improve the prediction of responses to current and future ecological changes.\nThe following publications and data resulted from this project:\nBelgrad, B. and B. Griffen. 2016. Predator-prey interactions mediated by prey personality and predator identity.Proc. Roy. Soc. B: In Review. [2016-01-20]P. herbstii mortality data: Mortality of crabs when exposed to either a single blue crab, toadfish, or no predator for a weekP. herbstii personality data: Refuge use of crabs when exposed to predator odor cues from either blue crabs, toadfish, or control of no cueP. herbstii predator behavior data: Refuge use and mobility of blue crabs and toadfish while in mesocosms for a week - behavior measured during two days.\nBelgrad, B. and B. Griffen. 2016. The influence of dietary shifts on fitness of the blue crab, Callinectes sapidus. PloS One. DOI: 10.1371/journal.pone.0145481.Blue crab activity: Activity of crabs fed different diets over a summerBlue crab egg size: Volume of eggs for crabs fed different dietsBlue crab hepatopancreas index (HSI): Weight of hepatopancreas for crabs fed different dietsBlue crab hepatopancreas lipid content: Hepatopancreas lipid content of crabs fed different dietsBlue crab reproductive tissue analysis (GSI): Gonadosomatic index of blue crabs on various dietsBlue crab survival: Blue crab survival data during the dietary study\nKnotts ER, Griffen BD. 2016. Individual movement rates are sufficient to determine and maintain dynamic spatial positioning within Uca pugilator herds. Behavioral Ecology and Sociobiology 70:639-646Uca pugilator: behavior change with carapace marking: Search space behavior due to carapace treatment (control, nail polish, and food dye)Uca pugilator: field spatial position: Assessment of individual's position within a herd at 3 min. intervals; for proportion of time found at edge of herdUca pugilator: herd position proportion: Individual's proportion of time spent in an edge/alone position among a herdUca pugilator: search space distribution: Search space that crabs traveled; to evaluate the sample's distribution of exploratory behavior\nBelgrad, B. and B. Griffen. 2015. Rhizocephalan infection modifies host food consumption by reducing host activity levels. Journal of Experimental Marine Biology and Ecology. 466: 70-75.E. depressus digestion time : Time taken for food to pass through gut of flat-backed mud crabs infected by a parasiteE. depressus metabolism: Respiration rate of infected/uninfected flat-backed mud crabsE. depressus reaction time to prey: Time taken for infected/uninfected flat-backed mud crabs to react to the presence of prey\nBlakeslee, A.M., C.L. Keogh, A.E. Fowler, B. Griffen. 2015. Assessing the effects of trematode infection on invasive green crabs in eastern North America. PLOS One 10(6): e0128674.(pdf)Carcinus: hemocyte density: Counts of circulating hemocyte density in Carcinus maenasCarcinus: parasites physiology behavior: Behavior and physiology of Carcinus maenas infected with trematode parasite\nGriffen BD, Norelli AP (2015) Spatially variable habitat quality contributes to within-population variation in reproductive success. Ecology and Evolution 5:1474-1483.P. herbstii diet: sampling site characteristics (Eco-Evo 2015)P. herbstii diet: body measurements (Eco-Evo 2015)P. herbstii diet & reproduction (Eco-Evo 2015)\nP. herbstii: collection sites (Ecol-Evol 2015)\nGriffen BD, Riley ME (2015) Potential impacts of invasive crabs on one life history strategy of native rock crabs in the Gulf of Maine. Biological Invasions 17:2533-2544.Cancer consumption and reproduction (Bio.Inv. 2015): Lab experiment linking dietary consumption and reproduction\nGriffen BD, Vogel M, Goulding L, Hartman R (2015) Energetic effects of diet choice by invasive Asian shore crabs: implications for persistence when prey are scarce. Marine Ecology Progress Series 522:181-192.Hemigrapsus diet 1 (MEPS 2015)Hemigrapsus diet 2 (MEPS 2015)\nHogan and Griffen (2014). The Dietary And Reproductive Consequences Of Fishery-Related Claw Removal For The Stone Crab Menippe Spp. Journal of Shellfish Research, Vol. 33, No. 3, 795–804.Stone crab: 052012-DietChoiceExp1: Prey choice for 2-clawed and 1-clawed Stone Crabs (Menippe spp.)Stone crab: 052012-LongTermConsumption: Long-term consuption for 2-clawed and 1-clawed Stone Crabs (Menippe spp.), summer of 2012Stone crab: 062013-DietChoiceExp2: Prey choice for 2-clawed and 1-clawed Stone Crabs (Menippe spp.)Stone crab: 062013-PreySizeSelection: Prey Size selection ranking for 2-clawed and 1-clawed Stone Crabs (Menippe spp.)\nRiley M, Johnston CA, Feller IC, and Griffen B. 2014. Range expansion of Aratus pisonii (mangrove tree crab) into novel vegetative habitats. Southeastern Naturalist 13(4): 43-38A. pisonii: range expansion: Aratus pisonii survey in native mangrove and novel salt marsh habitats\nRiley M, Vogel M, Griffen B. 2014. Fitness-associated consequences of an omnivorous diet for the mangrove tree crab Aratus pisonii. Aquatic Biology 20:35-43, DOI: 10.3354/ab00543A. pisonii: fitness and diet: Impact of diet variation on physiological and reproductive condition of A. pisonii\nToscano BJ, Newsome B, Griffen BD (2014) Parasite modification of predator functional response. Oecologia 175:345-352bE. depressus - parasite and feeding (Oecologia, 2014): Feeding with and without parasitic barnacle infectionE. depressus - parasite and prey handling (Oecologia, 2014): Food handling with and without parasitic barnacle infectionE. depressus - parasite study - field survey (Oecologia, 2014): Parasitised field survey\nToscano BJ, Griffen BD (2014) Trait-mediated functional responses: predator behavioural type mediates prey consumption.Journal of Animal Ecology 83:1469-1477P. herbstii - activity and feeding (JAE, 2014): Activity level and feeding with and without predator cue\nToscano BJ, Gatto J, Griffen BD (2014) Effects of predation threat on repeatability of individual crab behavior revealed by mark recapture. Behavioral Ecology and Sociobiology 68:519-527P. herbstii - recapture behavior (BESB, 2014): Mud crabs refuge use and activity level - initial measurementsP. herbstii - refuge use (BESB, 2014): Effect of predation threat on repeatability of individual crab behavior revealed by mark-recapture\nGriffen BD, Altman I, Bess BM, Hurley J, Penfield A (2012) The role of foraging in the success of invasive species. Biological Invasions. 14:2545-2558Hemigrapsus seasonal diet (Bio.Inv. 2012): Percent herbivory and gut fullness for Hemigrapsus sanguineus at different times of year\nGriffen BD, Toscano B, Gatto J (2012) The role of intraspecific trait variation in mediating indirect interactions. Ecology 93:1935-1943P. herbstii refuge use (Ecology, 2012): Proportion of time that Panopeus herbstii spent using refuge habitats in a lab experimentP. herbstii: Field personality distribution (Ecology, 2012): Field distribution of personality types in the mud crab Panopeus herbstii relative to tidal heightP. herbstii: Trait mediated indirect effect (Ecology, 2012): Influence of refuge use by the mud crab Panopeus herbstii on consumption of bivalves\nRiley ME, Griffen BD (2017) Habitat-specific differences alter traditional biogeographic patterns of life history in a climate-change induced range expansion.  PLOS One 12(5):e0176263A. pisonii: egg size: Comparing egg size in Aratus pisonii populations from mangrove and salt marsh habitatsA. pisonii: fecundity: Determining fecundity of Aratus pisonii populations in mangrove and salt marsh habitatsA. pisonii: larval starvation resistance: Comparing larval quality in Aratus pisonii populations from mangrove and salt marsh habitatsA. pisonii: latitudinal body size: Survey examining latitudinal body size patterns in Aratus pisoniiA. pisonii: predation: Comparing predation pressure on Aratus pisonii in mangrove and salt marsh habitatsA. pisonii: reproductive effort: Survey comparing Aratus pisonii reproductive effort in native and novel habitatsA. pisonii: herbivory: Relationship between leaf herbivory, tree characteristics, and refuge availabilityA. pisonii: mangrove tree survey: Mangrove tree distribution and characteristics in a dwarf mangrove system\nCannizzo ZJ, Dixon SR & Griffen BD (2018). An anthropogenic habitat within a suboptimal colonized ecosystem provides improved conditions for a range-shifting species. Ecology and Evolution, 8(3):1524-1533.A. pisonii: behavior: Proportion of time the mangrove tree crab Aratus pisonii spent in different behaviors related to diet and energy storageA. pisonii: dock-marsh thermal: Thermal readings from under a dock and in a nearby salt marshA. pisonii: sun-shade: Proportion of time that mangrove tree crab Aratus pisonii spent in sun and shade in three habitats, 2015-2016.A. pisonii: thermal picture: Thermal condition of A. pisonii in three habitats: under dock, mangroves, saltmarsh
attribute NC_GLOBAL projects_0_end_date String 2016-08
attribute NC_GLOBAL projects_0_name String Linking Variation in Metabolic Processes as a Key to Prediction
attribute NC_GLOBAL projects_0_project_nid String 562104
attribute NC_GLOBAL projects_0_start_date String 2011-09
attribute NC_GLOBAL publisher_name String Biological and Chemical Oceanographic Data Management Office (BCO-DMO)
attribute NC_GLOBAL publisher_type String institution
attribute NC_GLOBAL sourceUrl String (local files)
attribute NC_GLOBAL standard_name_vocabulary String CF Standard Name Table v55
attribute NC_GLOBAL summary String This dataset includes the proportion of time the mangrove crab, A. pisonii, spent in sun and shade in a mangrove, under a dock, and in a nearby salt marsh for a study of Aratus pisonii behavior. These data are presented in Cannizzo et al, (2018) Ecol & Evol.
attribute NC_GLOBAL title String [A. pisonii: sun-shade] - Proportion of time that mangrove tree crab Aratus pisonii spent in sun and shade in three habitats, 2015-2016. Cannizzo et al, (2018) Ecol & Evol. (Linking Variation in Metabolic Processes as a Key to Prediction)
attribute NC_GLOBAL version String 1
attribute NC_GLOBAL xml_source String osprey2erddap.update_xml() v1.3
variable Year short
attribute Year _FillValue short 32767
attribute Year actual_range short 2015, 2016
attribute Year bcodmo_name String year
attribute Year description String Year of observation/collection
attribute Year long_name String Year
attribute Year nerc_identifier String https://vocab.nerc.ac.uk/collection/P01/current/YEARXXXX/ (external link)
attribute Year units String unitless
variable Habitat String
attribute Habitat bcodmo_name String site_descrip
attribute Habitat description String The habitat where the crab was collected and observed.
attribute Habitat long_name String Habitat
attribute Habitat units String unitless
variable Site String
attribute Site bcodmo_name String site
attribute Site description String Site of observation/collection. RI= Round Island Park; PP=Pepper Park; BP=Bear Point; NC=North Causeway Park; Oslo=Oslo Road; ANA=Anastasia State Park; GTM= Guana-Tolomato-Matanzas NERR; PV= Palm Valley/Nocatee Canoe Launch; YC=St. Augustine Yacht Club
attribute Site long_name String Site
attribute Site units String unitless
variable ISO_Date String
attribute ISO_Date bcodmo_name String date
attribute ISO_Date description String Date in ISO format (yyyy-mm-dd)
attribute ISO_Date long_name String ISO Date
attribute ISO_Date nerc_identifier String https://vocab.nerc.ac.uk/collection/P01/current/ADATAA01/ (external link)
attribute ISO_Date source_name String ISO_Date
attribute ISO_Date time_precision String 1970-01-01
attribute ISO_Date units String unitless
variable ID short
attribute ID _FillValue short 32767
attribute ID actual_range short 1, 177
attribute ID bcodmo_name String individual
attribute ID description String individual ID number given to each crab
attribute ID long_name String ID
attribute ID units String unitless
variable totduration short
attribute totduration _FillValue short 32767
attribute totduration actual_range short 43, 476
attribute totduration bcodmo_name String duration
attribute totduration description String total duration in minutes of observational period.
attribute totduration long_name String Totduration
attribute totduration units String minutes
variable Shade float
attribute Shade _FillValue float NaN
attribute Shade actual_range float 0.06, 1.0
attribute Shade bcodmo_name String unknown
attribute Shade description String proportion of time crab was observed in the shade during the observational period
attribute Shade long_name String Shade
attribute Shade units String unitless
variable Sun float
attribute Sun _FillValue float NaN
attribute Sun actual_range float 0.0, 0.9
attribute Sun bcodmo_name String unknown
attribute Sun description String proportion of time crab was observed in the sun during the observational period
attribute Sun long_name String Sun
attribute Sun units String unitless
variable Invisible float
attribute Invisible _FillValue float NaN
attribute Invisible actual_range float 0.0, 0.66
attribute Invisible bcodmo_name String unknown
attribute Invisible description String proportion of time crab was not visible to the observer during the observational period
attribute Invisible long_name String Invisible
attribute Invisible units String unitless

 
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