BCO-DMO ERDDAP
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Row Type Variable Name Attribute Name Data Type Value
attribute NC_GLOBAL access_formats String .htmlTable,.csv,.json,.mat,.nc,.tsv
attribute NC_GLOBAL acquisition_description String These data were published in Hu et al., 2016.\n \nThis dataset is a raw output\\u00a0operational taxonomic unit (OTU) table\ngenerated by processing and clustering raw 18S rRNA gene tag sequences from\nDNA and RNA. The numbers in each column represent the number of sequences from\nthat sample belonging to a given OTU (row), with the last column listing the\ntaxonomic ID assigned to each OTU.\\u00a0The raw sequence data can be found in\nthe NCBI SRA database under accession\nnumber\\u00a0[SRP070577](\\\\\"https://www.ncbi.nlm.nih.gov/sra/SRP070577\\\\\")\\u00a0with\nthe\nassociated\\u00a0BioProject\\u00a0[PRJNA311248](\\\\\"https://www.ncbi.nlm.nih.gov//bioproject/PRJNA311248\\\\\").\\u00a0\nMetadata for these sequences can be found in the dataset:  \n \\u201d18S rRNA gene tag sequences from DNA and RNA\\\": [https://www.bco-\ndmo.org/dataset/745527](\\\\\"https://www.bco-dmo.org/dataset/745527\\\\\")\n \nNucleotide bases with a Q score lower than 20 for the last 30 bp of each\nsequence were trimmed. Paired-end sequences were merged using FLASh (Magoc and\nSalzberg 2011) with a minimum of 10 bp and maximum of 150 bp overlap between\neach sequence pair. Sequences shorter than 350 bp, longer than 460 bp, or\nwhich had an average quality score lower than 25 were discarded using QIIME\nv1.8 (Caporaso et al. 2010). Chimeric sequences were identified and removed,\nby either de novo or reference-based chimera checking (identify chimeric\nseqs.py in QIIME, intersection method).\\u00a0\n \nThe code release v2 associated with this version of the dataset can be\ndownloaded as a .zip file from the Supplemental\\u00a0Documents section of this\npage. Future code updates will be accessible from the GitHub\nrepository\\u00a0[https://github.com/shu251/V4_tagsequencing_18Sdiversity_q1](\\\\\"https://github.com/shu251/V4_tagsequencing_18Sdiversity_q1\\\\\").
attribute NC_GLOBAL awards_0_award_nid String 743048
attribute NC_GLOBAL awards_0_award_number String OCE-1737409
attribute NC_GLOBAL awards_0_data_url String http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1737409 (external link)
attribute NC_GLOBAL awards_0_funder_name String NSF Division of Ocean Sciences
attribute NC_GLOBAL awards_0_funding_acronym String NSF OCE
attribute NC_GLOBAL awards_0_funding_source_nid String 355
attribute NC_GLOBAL awards_0_program_manager String David L. Garrison
attribute NC_GLOBAL awards_0_program_manager_nid String 50534
attribute NC_GLOBAL cdm_data_type String Other
attribute NC_GLOBAL comment String OTU table \n  PI: David Caron \n  Data Version 1: 2019-07-24
attribute NC_GLOBAL Conventions String COARDS, CF-1.6, ACDD-1.3
attribute NC_GLOBAL creator_email String info at bco-dmo.org
attribute NC_GLOBAL creator_name String BCO-DMO
attribute NC_GLOBAL creator_type String institution
attribute NC_GLOBAL creator_url String https://www.bco-dmo.org/ (external link)
attribute NC_GLOBAL data_source String extract_data_as_tsv version 2.3  19 Dec 2019
attribute NC_GLOBAL dataset_current_state String Final and no updates
attribute NC_GLOBAL date_created String 2018-10-15T19:00:09Z
attribute NC_GLOBAL date_modified String 2020-03-06T17:42:26Z
attribute NC_GLOBAL defaultDataQuery String &time<now
attribute NC_GLOBAL doi String 10.26008/1912/bco-dmo.748064.1
attribute NC_GLOBAL infoUrl String https://www.bco-dmo.org/dataset/748064 (external link)
attribute NC_GLOBAL institution String BCO-DMO
attribute NC_GLOBAL instruments_0_acronym String Niskin bottle
attribute NC_GLOBAL instruments_0_dataset_instrument_nid String 748072
attribute NC_GLOBAL instruments_0_description String A Niskin bottle (a next generation water sampler based on the Nansen bottle) is a cylindrical, non-metallic water collection device with stoppers at both ends. The bottles can be attached individually on a hydrowire or deployed in 12, 24, or 36 bottle Rosette systems mounted on a frame and combined with a CTD. Niskin bottles are used to collect discrete water samples for a range of measurements including pigments, nutrients, plankton, etc.
attribute NC_GLOBAL instruments_0_instrument_external_identifier String https://vocab.nerc.ac.uk/collection/L22/current/TOOL0412/ (external link)
attribute NC_GLOBAL instruments_0_instrument_name String Niskin bottle
attribute NC_GLOBAL instruments_0_instrument_nid String 413
attribute NC_GLOBAL instruments_1_acronym String CTD SBE 911plus
attribute NC_GLOBAL instruments_1_dataset_instrument_nid String 748073
attribute NC_GLOBAL instruments_1_description String The Sea-Bird SBE 911plus is a type of CTD instrument package for continuous measurement of conductivity, temperature and pressure.  The SBE 911plus includes the SBE 9plus Underwater Unit and the SBE 11plus Deck Unit (for real-time readout using conductive wire) for deployment from a vessel. The combination of the SBE 9plus and SBE 11plus is called a SBE 911plus.  The SBE 9plus uses Sea-Bird's standard modular temperature and conductivity sensors (SBE 3plus and SBE 4). The SBE 9plus CTD can be configured with up to eight auxiliary sensors to measure other parameters including dissolved oxygen, pH, turbidity, fluorescence, light (PAR), light transmission, etc.). more information from Sea-Bird Electronics
attribute NC_GLOBAL instruments_1_instrument_external_identifier String https://vocab.nerc.ac.uk/collection/L22/current/TOOL0058/ (external link)
attribute NC_GLOBAL instruments_1_instrument_name String CTD Sea-Bird SBE 911plus
attribute NC_GLOBAL instruments_1_instrument_nid String 591
attribute NC_GLOBAL instruments_2_acronym String Automated Sequencer
attribute NC_GLOBAL instruments_2_dataset_instrument_nid String 748071
attribute NC_GLOBAL instruments_2_description String General term for a laboratory instrument used for deciphering the order of bases in a strand of DNA. Sanger sequencers detect fluorescence from different dyes that are used to identify the A, C, G, and T extension reactions. Contemporary or Pyrosequencer methods are based on detecting the activity of DNA polymerase (a DNA synthesizing enzyme) with another chemoluminescent enzyme. Essentially, the method allows sequencing of a single strand of DNA by synthesizing the complementary strand along it, one base pair at a time, and detecting which base was actually added at each step.
attribute NC_GLOBAL instruments_2_instrument_name String Automated DNA Sequencer
attribute NC_GLOBAL instruments_2_instrument_nid String 649
attribute NC_GLOBAL instruments_2_supplied_name String Illumina MiSeq
attribute NC_GLOBAL keywords String 150m, 890m, April_150m_cDNA, April_150m_DNA, April_5m_cDNA, April_5m_DNA, April_890m_cDNA, April_890m_DNA, April_CAT_cDNA, April_CAT_DNA, April_DCM_cDNA, April_DCM_DNA, April_POLA_cDNA, April_POLA_DNA, bco, bco-dmo, biological, cat, chemical, data, dataset, dcm, dmo, dna, erddap, Jan_150m_cDNA, Jan_150m_DNA, Jan_5m_cDNA, Jan_5m_DNA, Jan_890m_cDNA, Jan_890m_DNA, Jan_CAT_cDNA, Jan_CAT_DNA, Jan_DCM_cDNA, Jan_DCM_DNA, Jan_POLA_cDNA, Jan_POLA_DNA, July_150m_cDNA, July_150m_DNA, July_5m_cDNA, July_5m_DNA, July_890m_cDNA, July_890m_DNA, July_CAT_cDNA, July_CAT_DNA, July_DCM_cDNA, July_DCM_DNA, July_POLA_cDNA, July_POLA_DNA, management, oceanography, Oct_150m_cDNA, Oct_150m_DNA, Oct_5m_cDNA, Oct_5m_DNA, Oct_890m_cDNA, Oct_890m_DNA, Oct_CAT_cDNA, Oct_CAT_DNA, Oct_DCM_cDNA, Oct_DCM_DNA, Oct_POLA_cDNA, Oct_POLA_DNA, office, otu, OTU_ID, pola, preliminary, taxonomy
attribute NC_GLOBAL license String https://www.bco-dmo.org/dataset/748064/license (external link)
attribute NC_GLOBAL metadata_source String https://www.bco-dmo.org/api/dataset/748064 (external link)
attribute NC_GLOBAL param_mapping String {'748064': {}}
attribute NC_GLOBAL parameter_source String https://www.bco-dmo.org/mapserver/dataset/748064/parameters (external link)
attribute NC_GLOBAL people_0_affiliation String University of Southern California
attribute NC_GLOBAL people_0_affiliation_acronym String USC
attribute NC_GLOBAL people_0_person_name String David Caron
attribute NC_GLOBAL people_0_person_nid String 50524
attribute NC_GLOBAL people_0_role String Principal Investigator
attribute NC_GLOBAL people_0_role_type String originator
attribute NC_GLOBAL people_1_affiliation String University of Southern California
attribute NC_GLOBAL people_1_affiliation_acronym String USC
attribute NC_GLOBAL people_1_person_name String Sarah K. Hu
attribute NC_GLOBAL people_1_person_nid String 745520
attribute NC_GLOBAL people_1_role String Co-Principal Investigator
attribute NC_GLOBAL people_1_role_type String originator
attribute NC_GLOBAL people_2_affiliation String University of Southern California
attribute NC_GLOBAL people_2_affiliation_acronym String USC
attribute NC_GLOBAL people_2_person_name String Sarah K. Hu
attribute NC_GLOBAL people_2_person_nid String 745520
attribute NC_GLOBAL people_2_role String Contact
attribute NC_GLOBAL people_2_role_type String related
attribute NC_GLOBAL people_3_affiliation String Woods Hole Oceanographic Institution
attribute NC_GLOBAL people_3_affiliation_acronym String WHOI BCO-DMO
attribute NC_GLOBAL people_3_person_name String Amber D. York
attribute NC_GLOBAL people_3_person_nid String 643627
attribute NC_GLOBAL people_3_role String BCO-DMO Data Manager
attribute NC_GLOBAL people_3_role_type String related
attribute NC_GLOBAL project String SPOT
attribute NC_GLOBAL projects_0_acronym String SPOT
attribute NC_GLOBAL projects_0_description String Planktonic marine microbial communities consist of a diverse collection of bacteria, archaea, viruses, protists (phytoplankton and protozoa) and small animals (metazoan). Collectively, these species are responsible for virtually all marine pelagic primary production where they form the basis of food webs and carry out a large fraction of respiratory processes. Microbial interactions include the traditional role of predation, but recent research recognizes the importance of parasitism, symbiosis and viral infection. Characterizing the response of pelagic microbial communities and processes to environmental influences is fundamental to understanding and modeling carbon flow and energy utilization in the ocean, but very few studies have attempted to study all of these assemblages in the same study. This project is comprised of long-term (monthly) and short-term (daily) sampling at the San Pedro Ocean Time-series (SPOT) site. Analysis of the resulting datasets investigates co-occurrence patterns of microbial taxa (e.g. protist-virus and protist-prokaryote interactions, both positive and negative) indicating which species consistently co-occur and potentially interact, followed by examination gene expression to help define the underlying mechanisms. This study augments 20 years of baseline studies of microbial abundance, diversity, rates at the site, and will enable detection of low-frequency changes in composition and potential ecological interactions among microbes, and their responses to changing environmental forcing factors. These responses have important consequences for higher trophic levels and ocean-atmosphere feedbacks. The broader impacts of this project include training graduate and undergraduate students, providing local high school student with summer lab experiences, and PI presentations at local K-12 schools, museums, aquaria and informal learning centers in the region. Additionally, the PIs advise at the local, county and state level regarding coastal marine water quality.\nThis research project is unique in that it is a holistic study (including all microbes from viruses to small metazoa) of microbial species diversity and ecological activities, carried out at the SPOT site off the coast of southern California. In studying all microbes simultaneously, this work aims to identify important ecological interactions among microbial species, and identify the basis(es) for those interactions. This research involves (1) extensive analyses of prokaryote (archaean and bacterial) and eukaryote (protistan and micro-metazoan) diversity via the sequencing of marker genes, (2) studies of whole-community gene expression by eukaryotes and prokaryotes in order to identify key functional characteristics of microorganismal groups and the detection of active viral infections, and (3) metagenomic analysis of viruses and bacteria to aid interpretation of transcriptomic analyses using genome-encoded information. The project includes exploratory metatranscriptomic analysis of poorly-understood aphotic and hypoxic-zone protists, to examine their stratification, functions and hypothesized prokaryotic symbioses.
attribute NC_GLOBAL projects_0_end_date String 2021-07
attribute NC_GLOBAL projects_0_geolocation String San Pedro Channel off the coast of Los Angeles
attribute NC_GLOBAL projects_0_name String Protistan, prokaryotic, and viral processes at the San Pedro Ocean Time-series
attribute NC_GLOBAL projects_0_project_nid String 743049
attribute NC_GLOBAL projects_0_start_date String 2017-08
attribute NC_GLOBAL publisher_name String Biological and Chemical Oceanographic Data Management Office (BCO-DMO)
attribute NC_GLOBAL publisher_type String institution
attribute NC_GLOBAL sourceUrl String (local files)
attribute NC_GLOBAL standard_name_vocabulary String CF Standard Name Table v55
attribute NC_GLOBAL summary String This dataset is a raw output operational taxonomic unit (OTU) table generated by processing and clustering raw 18S rRNA gene tag sequences from extracted DNA and RNA. Columns represent samples, including month sampled, material (either extracted RNA or DNA), and depth (in meters); thus values in each column represent the number of sequences in that sample that belong to a given OTU (OTUs by row). Each row represents a single OTU. The last column lists the taxonomic identifier assigned to each OTU. The raw sequence data can be found in the NCBI SRA database under accession number SRP070577 with the associated BioProject PRJNA311248.
attribute NC_GLOBAL title String [OTU table for 18S rRNA gene tag sequences from DNA and RNA] - Operational taxonomic unit (OTU) table for 18S rRNA gene tag sequences from DNA and RNA from samples collected in coastal California in 2013 and 2014 (Protistan, prokaryotic, and viral processes at the San Pedro Ocean Time-series)
attribute NC_GLOBAL version String 1
attribute NC_GLOBAL xml_source String osprey2erddap.update_xml() v1.5
variable OTU_ID String
attribute OTU_ID bcodmo_name String taxon_code
attribute OTU_ID description String Taxonomic designations called Operational Taxonomic Units
attribute OTU_ID long_name String OTU ID
attribute OTU_ID units String unitless
variable April_150m_DNA short
attribute April_150m_DNA _FillValue short 32767
attribute April_150m_DNA actual_range short 0, 21841
attribute April_150m_DNA bcodmo_name String sequence
attribute April_150m_DNA description String DNA sequences from April at 150m depth at SPOT
attribute April_150m_DNA long_name String April 150m DNA
attribute April_150m_DNA units String unitless
variable July_DCM_DNA short
attribute July_DCM_DNA _FillValue short 32767
attribute July_DCM_DNA actual_range short 0, 15305
attribute July_DCM_DNA bcodmo_name String sequence
attribute July_DCM_DNA description String DNA sequences from July at the DCM at SPOT
attribute July_DCM_DNA long_name String July DCM DNA
attribute July_DCM_DNA units String unitless
variable April_890m_DNA short
attribute April_890m_DNA _FillValue short 32767
attribute April_890m_DNA actual_range short 0, 5012
attribute April_890m_DNA bcodmo_name String sequence
attribute April_890m_DNA description String DNA sequences from April at 890m depth at SPOT
attribute April_890m_DNA long_name String April 890m DNA
attribute April_890m_DNA units String unitless
variable Oct_DCM_DNA short
attribute Oct_DCM_DNA _FillValue short 32767
attribute Oct_DCM_DNA actual_range short 0, 6150
attribute Oct_DCM_DNA bcodmo_name String sequence
attribute Oct_DCM_DNA description String DNA sequences from Oct at the DCM at SPOT
attribute Oct_DCM_DNA long_name String Oct DCM DNA
attribute Oct_DCM_DNA units String unitless
variable Oct_150m_DNA int
attribute Oct_150m_DNA _FillValue int 2147483647
attribute Oct_150m_DNA actual_range int 0, 48601
attribute Oct_150m_DNA bcodmo_name String sequence
attribute Oct_150m_DNA description String DNA sequences from Oct at 150m depth at SPOT
attribute Oct_150m_DNA long_name String Oct 150m DNA
attribute Oct_150m_DNA units String unitless
variable July_150m_DNA short
attribute July_150m_DNA _FillValue short 32767
attribute July_150m_DNA actual_range short 0, 20621
attribute July_150m_DNA bcodmo_name String sequence
attribute July_150m_DNA description String DNA sequences from July at 150m depth at SPOT
attribute July_150m_DNA long_name String July 150m DNA
attribute July_150m_DNA units String unitless
variable April_150m_cDNA short
attribute April_150m_cDNA _FillValue short 32767
attribute April_150m_cDNA actual_range short 0, 6822
attribute April_150m_cDNA bcodmo_name String sequence
attribute April_150m_cDNA description String RNA(cDNA) sequences from April at 150m depth at SPOT
attribute April_150m_cDNA long_name String April 150m C DNA
attribute April_150m_cDNA units String unitless
variable July_150m_cDNA short
attribute July_150m_cDNA _FillValue short 32767
attribute July_150m_cDNA actual_range short 0, 12261
attribute July_150m_cDNA bcodmo_name String sequence
attribute July_150m_cDNA description String RNA(cDNA) sequences from July at 150m depth at SPOT
attribute July_150m_cDNA long_name String July 150m C DNA
attribute July_150m_cDNA units String unitless
variable Jan_DCM_DNA short
attribute Jan_DCM_DNA _FillValue short 32767
attribute Jan_DCM_DNA actual_range short 0, 11057
attribute Jan_DCM_DNA bcodmo_name String sequence
attribute Jan_DCM_DNA description String DNA sequences from Jan at the DCM at SPOT
attribute Jan_DCM_DNA long_name String Jan DCM DNA
attribute Jan_DCM_DNA units String unitless
variable Jan_150m_DNA short
attribute Jan_150m_DNA _FillValue short 32767
attribute Jan_150m_DNA actual_range short 0, 11928
attribute Jan_150m_DNA bcodmo_name String sequence
attribute Jan_150m_DNA description String DNA sequences from Jan at 150m depth at SPOT
attribute Jan_150m_DNA long_name String Jan 150m DNA
attribute Jan_150m_DNA units String unitless
variable April_CAT_DNA short
attribute April_CAT_DNA _FillValue short 32767
attribute April_CAT_DNA actual_range short 0, 14271
attribute April_CAT_DNA bcodmo_name String sequence
attribute April_CAT_DNA description String DNA sequences from April at the surface at Catalina Island
attribute April_CAT_DNA long_name String April CAT DNA
attribute April_CAT_DNA units String unitless
variable April_5m_DNA int
attribute April_5m_DNA _FillValue int 2147483647
attribute April_5m_DNA actual_range int 0, 44276
attribute April_5m_DNA bcodmo_name String sequence
attribute April_5m_DNA description String DNA sequences from April at 5m depth at SPOT
attribute April_5m_DNA long_name String April 5m DNA
attribute April_5m_DNA units String unitless
variable July_POLA_DNA short
attribute July_POLA_DNA _FillValue short 32767
attribute July_POLA_DNA actual_range short 0, 10078
attribute July_POLA_DNA bcodmo_name String sequence
attribute July_POLA_DNA description String DNA sequences from July at the surface at the Port of Los Angeles
attribute July_POLA_DNA long_name String July POLA DNA
attribute July_POLA_DNA units String unitless
variable July_CAT_DNA int
attribute July_CAT_DNA _FillValue int 2147483647
attribute July_CAT_DNA actual_range int 0, 41668
attribute July_CAT_DNA bcodmo_name String sequence
attribute July_CAT_DNA description String DNA sequences from July at the surface at Catalina Island
attribute July_CAT_DNA long_name String July CAT DNA
attribute July_CAT_DNA units String unitless
variable July_5m_DNA int
attribute July_5m_DNA _FillValue int 2147483647
attribute July_5m_DNA actual_range int 0, 54326
attribute July_5m_DNA bcodmo_name String sequence
attribute July_5m_DNA description String DNA sequences from July at 5m depth at SPOT
attribute July_5m_DNA long_name String July 5m DNA
attribute July_5m_DNA units String unitless
variable April_5m_cDNA int
attribute April_5m_cDNA _FillValue int 2147483647
attribute April_5m_cDNA actual_range int 0, 41114
attribute April_5m_cDNA bcodmo_name String sequence
attribute April_5m_cDNA description String RNA(cDNA) sequences from April at 5m depth at SPOT
attribute April_5m_cDNA long_name String April 5m C DNA
attribute April_5m_cDNA units String unitless
variable July_CAT_cDNA short
attribute July_CAT_cDNA _FillValue short 32767
attribute July_CAT_cDNA actual_range short 0, 8890
attribute July_CAT_cDNA bcodmo_name String sequence
attribute July_CAT_cDNA description String RNA(cDNA) sequences from July at the surface at Catalina Island
attribute July_CAT_cDNA long_name String July CAT C DNA
attribute July_CAT_cDNA units String unitless
variable July_5m_cDNA int
attribute July_5m_cDNA _FillValue int 2147483647
attribute July_5m_cDNA actual_range int 0, 34962
attribute July_5m_cDNA bcodmo_name String sequence
attribute July_5m_cDNA description String RNA(cDNA) sequences from July at 5m depth at SPOT
attribute July_5m_cDNA long_name String July 5m C DNA
attribute July_5m_cDNA units String unitless
variable Oct_CAT_DNA short
attribute Oct_CAT_DNA _FillValue short 32767
attribute Oct_CAT_DNA actual_range short 0, 9237
attribute Oct_CAT_DNA bcodmo_name String sequence
attribute Oct_CAT_DNA description String DNA sequences from Oct at the surface at Catalina Island
attribute Oct_CAT_DNA long_name String Oct CAT DNA
attribute Oct_CAT_DNA units String unitless
variable April_CAT_cDNA short
attribute April_CAT_cDNA _FillValue short 32767
attribute April_CAT_cDNA actual_range short 0, 4027
attribute April_CAT_cDNA bcodmo_name String sequence
attribute April_CAT_cDNA description String RNA(cDNA) sequences from April at the surface at Catalina Island
attribute April_CAT_cDNA long_name String April CAT C DNA
attribute April_CAT_cDNA units String unitless
variable Oct_POLA_DNA short
attribute Oct_POLA_DNA _FillValue short 32767
attribute Oct_POLA_DNA actual_range short 0, 7870
attribute Oct_POLA_DNA bcodmo_name String sequence
attribute Oct_POLA_DNA description String DNA sequences from Oct at the surface at the Port of Los Angeles
attribute Oct_POLA_DNA long_name String Oct POLA DNA
attribute Oct_POLA_DNA units String unitless
variable Oct_5m_DNA short
attribute Oct_5m_DNA _FillValue short 32767
attribute Oct_5m_DNA actual_range short 0, 21238
attribute Oct_5m_DNA bcodmo_name String sequence
attribute Oct_5m_DNA description String DNA sequences from Oct at 5m depth at SPOT
attribute Oct_5m_DNA long_name String Oct 5m DNA
attribute Oct_5m_DNA units String unitless
variable Oct_CAT_cDNA short
attribute Oct_CAT_cDNA _FillValue short 32767
attribute Oct_CAT_cDNA actual_range short 0, 13068
attribute Oct_CAT_cDNA bcodmo_name String sequence
attribute Oct_CAT_cDNA description String RNA(cDNA) sequences from Oct at the surface at Catalina Island
attribute Oct_CAT_cDNA long_name String Oct CAT C DNA
attribute Oct_CAT_cDNA units String unitless
variable Oct_5m_cDNA short
attribute Oct_5m_cDNA _FillValue short 32767
attribute Oct_5m_cDNA actual_range short 0, 13778
attribute Oct_5m_cDNA bcodmo_name String sequence
attribute Oct_5m_cDNA description String RNA(cDNA) sequences from Oct at 5m depth at SPOT
attribute Oct_5m_cDNA long_name String Oct 5m C DNA
attribute Oct_5m_cDNA units String unitless
variable Jan_CAT_DNA short
attribute Jan_CAT_DNA _FillValue short 32767
attribute Jan_CAT_DNA actual_range short 0, 4128
attribute Jan_CAT_DNA bcodmo_name String sequence
attribute Jan_CAT_DNA description String DNA sequences from Jan at the surface at Catalina Island
attribute Jan_CAT_DNA long_name String Jan CAT DNA
attribute Jan_CAT_DNA units String unitless
variable Jan_5m_DNA int
attribute Jan_5m_DNA _FillValue int 2147483647
attribute Jan_5m_DNA actual_range int 0, 85900
attribute Jan_5m_DNA bcodmo_name String sequence
attribute Jan_5m_DNA description String DNA sequences from Jan at 5m depth at SPOT
attribute Jan_5m_DNA long_name String Jan 5m DNA
attribute Jan_5m_DNA units String unitless
variable Jan_POLA_DNA short
attribute Jan_POLA_DNA _FillValue short 32767
attribute Jan_POLA_DNA actual_range short 0, 11517
attribute Jan_POLA_DNA bcodmo_name String sequence
attribute Jan_POLA_DNA description String DNA sequences from Jan at the surface at the Port of Los Angeles
attribute Jan_POLA_DNA long_name String Jan POLA DNA
attribute Jan_POLA_DNA units String unitless
variable Jan_5m_cDNA short
attribute Jan_5m_cDNA _FillValue short 32767
attribute Jan_5m_cDNA actual_range short 0, 9762
attribute Jan_5m_cDNA bcodmo_name String sequence
attribute Jan_5m_cDNA description String RNA(cDNA) sequences from Jan at 5m depth at SPOT
attribute Jan_5m_cDNA long_name String Jan 5m C DNA
attribute Jan_5m_cDNA units String unitless
variable April_DCM_DNA short
attribute April_DCM_DNA _FillValue short 32767
attribute April_DCM_DNA actual_range short 0, 6241
attribute April_DCM_DNA bcodmo_name String sequence
attribute April_DCM_DNA description String DNA sequences from April at the DCM at SPOT
attribute April_DCM_DNA long_name String April DCM DNA
attribute April_DCM_DNA units String unitless
variable Jan_CAT_cDNA short
attribute Jan_CAT_cDNA _FillValue short 32767
attribute Jan_CAT_cDNA actual_range short 0, 4167
attribute Jan_CAT_cDNA bcodmo_name String sequence
attribute Jan_CAT_cDNA description String RNA(cDNA) sequences from Jan at the surface at Catalina Island
attribute Jan_CAT_cDNA long_name String Jan CAT C DNA
attribute Jan_CAT_cDNA units String unitless
variable July_DCM_cDNA short
attribute July_DCM_cDNA _FillValue short 32767
attribute July_DCM_cDNA actual_range short 0, 4126
attribute July_DCM_cDNA bcodmo_name String sequence
attribute July_DCM_cDNA description String RNA(cDNA) sequences from July at the DCM at SPOT
attribute July_DCM_cDNA long_name String July DCM C DNA
attribute July_DCM_cDNA units String unitless
variable April_DCM_cDNA int
attribute April_DCM_cDNA _FillValue int 2147483647
attribute April_DCM_cDNA actual_range int 0, 36115
attribute April_DCM_cDNA bcodmo_name String sequence
attribute April_DCM_cDNA description String RNA(cDNA) sequences from April at the DCM at SPOT
attribute April_DCM_cDNA long_name String April DCM C DNA
attribute April_DCM_cDNA units String unitless
variable Oct_150m_cDNA short
attribute Oct_150m_cDNA _FillValue short 32767
attribute Oct_150m_cDNA actual_range short 0, 17818
attribute Oct_150m_cDNA bcodmo_name String sequence
attribute Oct_150m_cDNA description String RNA(cDNA) sequences from Oct at 150m depth at SPOT
attribute Oct_150m_cDNA long_name String Oct 150m C DNA
attribute Oct_150m_cDNA units String unitless
variable Jan_DCM_cDNA short
attribute Jan_DCM_cDNA _FillValue short 32767
attribute Jan_DCM_cDNA actual_range short 0, 12655
attribute Jan_DCM_cDNA bcodmo_name String sequence
attribute Jan_DCM_cDNA description String RNA(cDNA) sequences from Jan at the DCM at SPOT
attribute Jan_DCM_cDNA long_name String Jan DCM C DNA
attribute Jan_DCM_cDNA units String unitless
variable Jan_150m_cDNA short
attribute Jan_150m_cDNA _FillValue short 32767
attribute Jan_150m_cDNA actual_range short 0, 5363
attribute Jan_150m_cDNA bcodmo_name String sequence
attribute Jan_150m_cDNA description String RNA(cDNA) sequences from Jan at 150m depth at SPOT
attribute Jan_150m_cDNA long_name String Jan 150m C DNA
attribute Jan_150m_cDNA units String unitless
variable April_POLA_cDNA short
attribute April_POLA_cDNA _FillValue short 32767
attribute April_POLA_cDNA actual_range short 0, 8474
attribute April_POLA_cDNA bcodmo_name String sequence
attribute April_POLA_cDNA description String RNA(cDNA) sequences from April at the surface at the Port of Los Angeles
attribute April_POLA_cDNA long_name String April POLA C DNA
attribute April_POLA_cDNA units String unitless
variable July_POLA_cDNA short
attribute July_POLA_cDNA _FillValue short 32767
attribute July_POLA_cDNA actual_range short 0, 1747
attribute July_POLA_cDNA bcodmo_name String sequence
attribute July_POLA_cDNA description String RNA(cDNA) sequences from July at the surface at the Port of Los Angeles
attribute July_POLA_cDNA long_name String July POLA C DNA
attribute July_POLA_cDNA units String unitless
variable April_POLA_DNA int
attribute April_POLA_DNA _FillValue int 2147483647
attribute April_POLA_DNA actual_range int 0, 34225
attribute April_POLA_DNA bcodmo_name String sequence
attribute April_POLA_DNA description String DNA sequences from April at the surface at the Port of Los Angeles
attribute April_POLA_DNA long_name String April POLA DNA
attribute April_POLA_DNA units String unitless
variable Oct_POLA_cDNA short
attribute Oct_POLA_cDNA _FillValue short 32767
attribute Oct_POLA_cDNA actual_range short 0, 4979
attribute Oct_POLA_cDNA bcodmo_name String sequence
attribute Oct_POLA_cDNA description String RNA(cDNA) sequences from Oct at the surface at the Port of Los Angeles
attribute Oct_POLA_cDNA long_name String Oct POLA C DNA
attribute Oct_POLA_cDNA units String unitless
variable Jan_POLA_cDNA short
attribute Jan_POLA_cDNA _FillValue short 32767
attribute Jan_POLA_cDNA actual_range short 0, 5356
attribute Jan_POLA_cDNA bcodmo_name String sequence
attribute Jan_POLA_cDNA description String RNA(cDNA) sequences from Jan at the surface at the Port of Los Angeles
attribute Jan_POLA_cDNA long_name String Jan POLA C DNA
attribute Jan_POLA_cDNA units String unitless
variable July_890m_DNA int
attribute July_890m_DNA _FillValue int 2147483647
attribute July_890m_DNA actual_range int 0, 36900
attribute July_890m_DNA bcodmo_name String sequence
attribute July_890m_DNA description String DNA sequences from July at 890m depth at SPOT
attribute July_890m_DNA long_name String July 890m DNA
attribute July_890m_DNA units String unitless
variable July_890m_cDNA short
attribute July_890m_cDNA _FillValue short 32767
attribute July_890m_cDNA actual_range short 0, 7020
attribute July_890m_cDNA bcodmo_name String sequence
attribute July_890m_cDNA description String RNA(cDNA) sequences from July at 890m depth at SPOT
attribute July_890m_cDNA long_name String July 890m C DNA
attribute July_890m_cDNA units String unitless
variable Oct_DCM_cDNA short
attribute Oct_DCM_cDNA _FillValue short 32767
attribute Oct_DCM_cDNA actual_range short 0, 22639
attribute Oct_DCM_cDNA bcodmo_name String sequence
attribute Oct_DCM_cDNA description String RNA(cDNA) sequences from Oct at the DCM at SPOT
attribute Oct_DCM_cDNA long_name String Oct DCM C DNA
attribute Oct_DCM_cDNA units String unitless
variable Jan_890m_DNA short
attribute Jan_890m_DNA _FillValue short 32767
attribute Jan_890m_DNA actual_range short 0, 12034
attribute Jan_890m_DNA bcodmo_name String sequence
attribute Jan_890m_DNA description String DNA sequences from Jan at 890m depth at SPOT
attribute Jan_890m_DNA long_name String Jan 890m DNA
attribute Jan_890m_DNA units String unitless
variable Jan_890m_cDNA int
attribute Jan_890m_cDNA _FillValue int 2147483647
attribute Jan_890m_cDNA actual_range int 0, 39471
attribute Jan_890m_cDNA bcodmo_name String sequence
attribute Jan_890m_cDNA description String RNA(cDNA) sequences from Jan at 890m depth at SPOT
attribute Jan_890m_cDNA long_name String Jan 890m C DNA
attribute Jan_890m_cDNA units String unitless
variable Oct_890m_DNA short
attribute Oct_890m_DNA _FillValue short 32767
attribute Oct_890m_DNA actual_range short 0, 32081
attribute Oct_890m_DNA bcodmo_name String sequence
attribute Oct_890m_DNA description String DNA sequences from Oct at 890m depth at SPOT
attribute Oct_890m_DNA long_name String Oct 890m DNA
attribute Oct_890m_DNA units String unitless
variable Oct_890m_cDNA int
attribute Oct_890m_cDNA _FillValue int 2147483647
attribute Oct_890m_cDNA actual_range int 0, 37061
attribute Oct_890m_cDNA bcodmo_name String sequence
attribute Oct_890m_cDNA description String RNA(cDNA) sequences from Oct at 890m depth at SPOT
attribute Oct_890m_cDNA long_name String Oct 890m C DNA
attribute Oct_890m_cDNA units String unitless
variable April_890m_cDNA short
attribute April_890m_cDNA _FillValue short 32767
attribute April_890m_cDNA actual_range short 0, 3950
attribute April_890m_cDNA bcodmo_name String sequence
attribute April_890m_cDNA description String RNA(cDNA) sequences from April at 890m depth at SPOT
attribute April_890m_cDNA long_name String April 890m C DNA
attribute April_890m_cDNA units String unitless
variable taxonomy String
attribute taxonomy bcodmo_name String taxon
attribute taxonomy description String Full taxonomic description from SILVA v111 database
attribute taxonomy long_name String Taxonomy
attribute taxonomy units String unitless

 
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