BCO-DMO ERDDAP
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Row Type Variable Name Attribute Name Data Type Value
attribute NC_GLOBAL access_formats String .htmlTable,.csv,.json,.mat,.nc,.tsv,.esriCsv,.geoJson
attribute NC_GLOBAL acquisition_description String Nutrient analysis\n \n\\u00a0\n \nNutrient samples were filtered through 0.22 \\u03bcm pore size\nDurapore\\u00a0GVWP filters (Millipore Sigma) and frozen at \\u221220_C\nimmediately\\u00a0after collection, then stored at \\u221280_C until\nanalysis.\\u00a0Dissolved nitrate (NO3\\u00a0\\u2212), nitrite (NO2\\u00a0\\u2212),\nphosphate (PO4\\u00a03\\u2212), and\\u00a0silicate (SiO4\\u00a04\\u2212) were\nmeasured using a Bran and Luebbe AA3\\u00a0autoanalyzer as described previously\n(Wilkerson et al. 2015).\\u00a0Ammonium and urea were measured manually using\nthe\\u00a0phenolhypochlorite method (Sol\\u00f3rzano 1969) and the\ndiacetylmonoxime\\u00a0method (Rahmatullah and Boyde 1980; Mulvenna\\u00a0and\nSavidge 1992), respectively.\\u00a0\n \nOxidation rate measurements\\u00a0\n \nWe used 15N-labeled substrates (98\\u201399% 15N, Cambridge\\u00a0Isotope\nLaboratories) to measure the oxidation of N supplied\\u00a0as NH4+, urea,\n1,2-diaminoethane (DAE), 1,3-diaminopropane\\u00a0(DAP), 1,4-diaminobutane\n(putrescine, PUT), L-glutamic acid\\u00a0(GLU), and L-arginine (ARG). 15N\noxidation from NH4+, urea,\\u00a0PUT, and GLU were measured extensively,\nwhereas 15N oxidation\\u00a0from DAE, DAP, and ARG was only measured at a\nsubset\\u00a0of stations (Supporting Information Table S1). GLU and\nARG\\u00a0were included as a control for remineralization, as their\ncentral\\u00a0roles in microbial metabolism leads to rapid catabolism\nand\\u00a0NH4\\u00a0+ regeneration (Hollibaugh 1978; Goldman et al.\n1987).\\u00a0PUT was used in routine assessments of the oxidation\nof\\u00a0polyamine-N because it is one of the most consistently\ndetected\\u00a0polyamines in seawater (Nishibori et al. 2001a, 2003; Lu\\u00a0et\nal. 2014; Liu et al. 2015). Although spermine and spermidine\\u00a0are also\ncommon in seawater, 15N-labeled stocks of these polyamines\\u00a0were not\ncommercially available. We measured the oxidation\\u00a0of N from DAE and DAP\nto investigate the effect of\\u00a0aliphatic chain length (which affects pKa)\non oxidation rate.\\u00a0\n \nDuplicate seawater samples contained in 1-liter polycarbonate\\u00a0or 250 mL\nhigh density polyethylene (HDPE) bottles\\u00a0wrapped with aluminum foil (to\nexclude light) were\\u00a0amended with 10\\u201350 nM 15N-labeled substrate.\nMarsh\\u00a0Landing samples were then placed in an incubator held at\\u00a0in\nsitu temperature in the dark. Samples taken at the Skidaway\\u00a0dock were\nplaced in a mesh bag and immersed at the\\u00a0sea surface at the sampling\nsite. Samples collected at sea\\u00a0were incubated in a tank of flowing\nsurface seawater or in an\\u00a0incubator held at 18 C in the dark. Incubation\nbottles were sampled\\u00a0for 15N analysis immediately after substrate\naddition and\\u00a0again after a period of ~ 24 h. 15N samples were subsampled\ninto\\u00a050 mL polypropylene centrifuge tubes, frozen at \\u221220_C,\nand\\u00a0stored at \\u221280_C until analysis. The 15N/14N ratios of the\nNO3\\u00a0\\u2212\\u00a0plus NO2\\u00a0\\u2212 (NOX) pools (\\u03b415NNOx) in the\nsamples were measured\\u00a0using the bacterial denitrifier method to convert\nNOX to nitrous\\u00a0oxide (N2O; Sigman et al. 2001). The \\u03b415N values of\nthe N2O\\u00a0produced were measured using a Finnigan MAT-252\nisotope\\u00a0ratio mass spectrometer coupled with a modified GasBench II\ninterface (Casciotti et al. 2002; Beman et al. 2011; McIlvin\\u00a0and\nCasciotti 2011). Oxidation rates were calculated using an\\u00a0endpoint model\n(Beman et al. 2011; Damashek et al. 2016).\\u00a0Since the substrates used were\nuniformly labeled with 15N, the\\u00a0amount of the N added as the 15N spike\n(in \\u03bcM) was multiplied\\u00a0by the number of moles of 15N per mole of\nsubstrate, which\\u00a0assumes that all of the N atoms have equal probability\nof being\\u00a0oxidized. This is likely true for urea, DAE, DAP, and PUT,\nwhich\\u00a0are symmetrical molecules, but not likely to be true for\nARG,\\u00a0which contains 4 N atoms (one in the \\u03b1-amino position\nand\\u00a0three in the guanidine structure of its R-group). Abiotic\noxidation\\u00a0of organic N was assessed by measuring 15NOX\nproduction\\u00a0following 15N amendment and incubation of 0.22 \\u03bcm\nfiltered\\u00a0seawater (as described above), and potential metabolism\nof\\u00a0DON by the denitrifying bacteria used to convert NOX to N2O\\u00a0was\nchecked by adding 15N-labeled substrates into the bacterial\\u00a0cultures\nprior to mass spectrometry.\\u00a0\n \nWe were unable to measure the in situ concentrations of\\u00a0the individual\ncomponents of DON used in oxidation experiments,\\u00a0other than urea. Based\non previous measurements\\u00a0made in the SAB (Lu et al. 2014; Liu et al.\n2015), we assumed\\u00a0concentrations of 1 nM and 0.25 nM for DAE, DAP and\nPUT,\\u00a0and 10 nM and 5 nM for GLU and ARG, at inshore and\\u00a0mid-shelf\n/shelf-break/oceanic stations, respectively. Rates of\\u00a0polyamine and amino\nacid oxidation reported below should\\u00a0therefore be considered potential\nrates, as amendments as low\\u00a0as 10\\u201350 nM are likely to increase\nsubstrate concentrations\\u00a0substantially above in situ. Initial substrate\n15N activity was\\u00a0calculated using isotope mass balance using the known\nconcentration\\u00a0and 15N activity of the labeled substrates added\\u00a0and\nassuming the concentrations described above and natural\\u00a0abundance 15N\nactivity (i.e., 0.3663 atom% 15N).\\u00a0
attribute NC_GLOBAL awards_0_award_nid String 757586
attribute NC_GLOBAL awards_0_award_number String OCE-1537995
attribute NC_GLOBAL awards_0_data_url String http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1537995 (external link)
attribute NC_GLOBAL awards_0_funder_name String NSF Division of Ocean Sciences
attribute NC_GLOBAL awards_0_funding_acronym String NSF OCE
attribute NC_GLOBAL awards_0_funding_source_nid String 355
attribute NC_GLOBAL awards_0_program_manager String Henrietta N Edmonds
attribute NC_GLOBAL awards_0_program_manager_nid String 51517
attribute NC_GLOBAL awards_1_award_nid String 757590
attribute NC_GLOBAL awards_1_award_number String OCE-1538677
attribute NC_GLOBAL awards_1_data_url String http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1538677 (external link)
attribute NC_GLOBAL awards_1_funder_name String NSF Division of Ocean Sciences
attribute NC_GLOBAL awards_1_funding_acronym String NSF OCE
attribute NC_GLOBAL awards_1_funding_source_nid String 355
attribute NC_GLOBAL awards_1_program_manager String Henrietta N Edmonds
attribute NC_GLOBAL awards_1_program_manager_nid String 51517
attribute NC_GLOBAL cdm_data_type String Other
attribute NC_GLOBAL comment String DON Oxidation data collected on cruise SAV 17-16 \n  PI: James T. Hollibaugh \n  Version: 2019-05-08 \n  \n  comment value a = Environmental data, bacterial 16S, thaumarchaeal 16S, AOB amoA, ammonia oxidation, and urea oxidation data were reported previously in Liu et al. (2015) or Tolar et al. (2017);
attribute NC_GLOBAL Conventions String COARDS, CF-1.6, ACDD-1.3
attribute NC_GLOBAL creator_email String info at bco-dmo.org
attribute NC_GLOBAL creator_name String BCO-DMO
attribute NC_GLOBAL creator_type String institution
attribute NC_GLOBAL creator_url String https://www.bco-dmo.org/ (external link)
attribute NC_GLOBAL data_source String extract_data_as_tsv version 2.3  19 Dec 2019
attribute NC_GLOBAL date_created String 2019-05-08T14:21:19Z
attribute NC_GLOBAL date_modified String 2019-06-21T18:12:18Z
attribute NC_GLOBAL defaultDataQuery String &time<now
attribute NC_GLOBAL doi String 10.1575/1912/bco-dmo.767048.1
attribute NC_GLOBAL Easternmost_Easting double -78.77
attribute NC_GLOBAL geospatial_lat_max double 31.99
attribute NC_GLOBAL geospatial_lat_min double 30.32
attribute NC_GLOBAL geospatial_lat_units String degrees_north
attribute NC_GLOBAL geospatial_lon_max double -78.77
attribute NC_GLOBAL geospatial_lon_min double -81.36
attribute NC_GLOBAL geospatial_lon_units String degrees_east
attribute NC_GLOBAL geospatial_vertical_max double 500.0
attribute NC_GLOBAL geospatial_vertical_min double 0.2
attribute NC_GLOBAL geospatial_vertical_positive String down
attribute NC_GLOBAL geospatial_vertical_units String m
attribute NC_GLOBAL infoUrl String https://www.bco-dmo.org/dataset/767048 (external link)
attribute NC_GLOBAL institution String BCO-DMO
attribute NC_GLOBAL instruments_0_acronym String CTD SBE 25
attribute NC_GLOBAL instruments_0_dataset_instrument_description String Water from multiple depths was collected using 12-liter Niskin bottles mounted on a rosette equipped with a Sea-Bird SBE25 CTD. Profiles of salinity, temperature, dissolved oxygen, fluorescence, and photosynthetically active radiation (PAR) were collected using the CTD system as described previously (Liu et al. 2018).
attribute NC_GLOBAL instruments_0_dataset_instrument_nid String 767193
attribute NC_GLOBAL instruments_0_description String The Sea-Bird SBE 25 SEALOGGER CTD is battery powered and is typically used to record data in memory, eliminating the need for a large vessel, electrical sea cable, and on-board computer. All SBE 25s can also operate in real-time, transmitting data via an opto-isolated RS-232 serial port. Temperature and conductivity are measured by the SBE 3F Temperature sensor and SBE 4 Conductivity sensor (same as those used on the premium SBE 9plus CTD). The SBE 25 also includes the SBE 5P (plastic) or 5T (titanium) Submersible Pump and TC Duct. The pump-controlled, TC-ducted flow configuration significantly reduces salinity spiking caused by ship heave, and in calm waters allows slower descent rates for improved resolution of water column features. Pressure is measured by the modular SBE 29 Temperature Compensated Strain-Gauge Pressure sensor (available in eight depth ranges to suit the operating depth requirement). The SBE 25's modular design makes it easy to configure in the field for a wide range of auxiliary sensors, including optional dissolved oxygen (SBE 43), pH (SBE 18 or SBE 27), fluorescence, transmissivity, PAR, and optical backscatter sensors. More information from Sea-Bird Electronics: http:www.seabird.com.
attribute NC_GLOBAL instruments_0_instrument_external_identifier String https://vocab.nerc.ac.uk/collection/L22/current/TOOL0040/ (external link)
attribute NC_GLOBAL instruments_0_instrument_name String CTD Sea-Bird 25
attribute NC_GLOBAL instruments_0_instrument_nid String 421
attribute NC_GLOBAL instruments_0_supplied_name String Sea-Bird SBE25 CTD
attribute NC_GLOBAL instruments_1_acronym String IR Mass Spec
attribute NC_GLOBAL instruments_1_dataset_instrument_description String The δ15N values of the N2O produced were measured using a Finnigan MAT-252 isotope ratio mass spectrometer coupled with a modified GasBench II interface
attribute NC_GLOBAL instruments_1_dataset_instrument_nid String 767195
attribute NC_GLOBAL instruments_1_description String The Isotope-ratio Mass Spectrometer is a particular type of mass spectrometer used to measure the relative abundance of isotopes in a given sample (e.g. VG Prism II Isotope Ratio Mass-Spectrometer).
attribute NC_GLOBAL instruments_1_instrument_external_identifier String https://vocab.nerc.ac.uk/collection/L05/current/LAB16/ (external link)
attribute NC_GLOBAL instruments_1_instrument_name String Isotope-ratio Mass Spectrometer
attribute NC_GLOBAL instruments_1_instrument_nid String 469
attribute NC_GLOBAL instruments_1_supplied_name String Finnigan MAT-252 isotope ratio mass spectrometer
attribute NC_GLOBAL instruments_2_acronym String Bran Luebbe AA3 AutoAnalyzer
attribute NC_GLOBAL instruments_2_dataset_instrument_description String Dissolved nitrate (NO3 −), nitrite (NO2 −), phosphate (PO4 3−), and silicate (SiO4 4−) were measured using a Bran and Luebbe AA3 autoanalyzer as described previously (Wilkerson et al. 2015).
attribute NC_GLOBAL instruments_2_dataset_instrument_nid String 767194
attribute NC_GLOBAL instruments_2_description String Bran Luebbe AA3 AutoAnalyzer\nSee the description from the manufacturer.
attribute NC_GLOBAL instruments_2_instrument_external_identifier String https://vocab.nerc.ac.uk/collection/L05/current/LAB04/ (external link)
attribute NC_GLOBAL instruments_2_instrument_name String Bran Luebbe AA3 AutoAnalyzer
attribute NC_GLOBAL instruments_2_instrument_nid String 700
attribute NC_GLOBAL instruments_2_supplied_name String Bran and Luebbe AA3 autoanalyzer
attribute NC_GLOBAL instruments_3_acronym String qPCR
attribute NC_GLOBAL instruments_3_dataset_instrument_description String All reactions (25 μL total volume) were run in triplicate on a C1000 Touch Thermal Cycler equipped with a CFX96 Real-Time System (Bio- Rad), using either the iTaq Universal Green SYBR Mix (Bio-Rad) or the Platinum qPCR SuperMix-UDG (Thermo Fisher).
attribute NC_GLOBAL instruments_3_dataset_instrument_nid String 767196
attribute NC_GLOBAL instruments_3_description String An instrument for quantitative polymerase chain reaction (qPCR), also known as real-time polymerase chain reaction (Real-Time PCR).
attribute NC_GLOBAL instruments_3_instrument_name String qPCR Thermal Cycler
attribute NC_GLOBAL instruments_3_instrument_nid String 707569
attribute NC_GLOBAL instruments_3_supplied_name String C1000 Touch Thermal Cycler
attribute NC_GLOBAL keywords String added, ammonia, Ammonia_Oxidation, Ammonia_Oxidation_sd, ammonium, amo, arg, atten, Atten_Coeff, bacterial, Bacterial_16S_rRNA, bco, bco-dmo, biological, chemical, chemistry, coeff, comment, concentration, cruise, Cruise_ID, dae, dap, data, dataset, date, density, depth, diss, Diss_Oxygen, dmo, earth, Earth Science > Oceans > Ocean Chemistry > Ammonia, Earth Science > Oceans > Ocean Chemistry > Phosphate, Earth Science > Oceans > Ocean Chemistry > Silicate, Earth Science > Oceans > Salinity/Density > Salinity, erddap, fluor, glu, iso, ISO_Date, latitude, latitude2, longitude, longitude2, management, mass, mass_concentration_of_phosphate_in_sea_water, mass_concentration_of_silicate_in_sea_water, mole, mole_concentration_of_ammonium_in_sea_water, mole_concentration_of_nitrite_in_sea_water, n02, n15, N15_added, N15_ox_from_ARG, N15_ox_from_ARG_sd, N15_ox_from_DAE, N15_ox_from_DAE_sd, N15_ox_from_DAP, N15_ox_from_DAP_sd, N15_ox_from_GLU, N15_ox_from_GLU_sd, N15_ox_from_PUT, N15_ox_from_PUT_sd, N15_ox_from_UREA, N15_ox_from_UREA_sd, nh4, nitrate, nitrite, nitrospina, Nitrospina_16S_rRNA, no3, O2, ocean, oceanography, oceans, office, oxidation, oxygen, phosphate, po4, practical, preliminary, put, region, relative, Relative_Fluor, rna, salinity, science, sea, sea_water_practical_salinity, seawater, silicate, sta, temperature, thaumarchaeal, Thaumarchaeal_16S_rRNA, time, urea, water, wca, WCA_amoA, wcb, WCB_amoA
attribute NC_GLOBAL keywords_vocabulary String GCMD Science Keywords
attribute NC_GLOBAL license String https://www.bco-dmo.org/dataset/767048/license (external link)
attribute NC_GLOBAL metadata_source String https://www.bco-dmo.org/api/dataset/767048 (external link)
attribute NC_GLOBAL Northernmost_Northing double 31.99
attribute NC_GLOBAL param_mapping String {'767048': {'lat': 'flag - latitude', 'depth': 'flag - depth', 'lon': 'flag - longitude'}}
attribute NC_GLOBAL parameter_source String https://www.bco-dmo.org/mapserver/dataset/767048/parameters (external link)
attribute NC_GLOBAL people_0_affiliation String University of Georgia
attribute NC_GLOBAL people_0_affiliation_acronym String UGA
attribute NC_GLOBAL people_0_person_name String Dr James T. Hollibaugh
attribute NC_GLOBAL people_0_person_nid String 662307
attribute NC_GLOBAL people_0_role String Principal Investigator
attribute NC_GLOBAL people_0_role_type String originator
attribute NC_GLOBAL people_1_affiliation String University of Hawaii
attribute NC_GLOBAL people_1_person_name String Brian N. Popp
attribute NC_GLOBAL people_1_person_nid String 51093
attribute NC_GLOBAL people_1_role String Co-Principal Investigator
attribute NC_GLOBAL people_1_role_type String originator
attribute NC_GLOBAL people_2_affiliation String Woods Hole Oceanographic Institution
attribute NC_GLOBAL people_2_affiliation_acronym String WHOI BCO-DMO
attribute NC_GLOBAL people_2_person_name String Mathew Biddle
attribute NC_GLOBAL people_2_person_nid String 708682
attribute NC_GLOBAL people_2_role String BCO-DMO Data Manager
attribute NC_GLOBAL people_2_role_type String related
attribute NC_GLOBAL project String DON Oxidation
attribute NC_GLOBAL projects_0_acronym String DON Oxidation
attribute NC_GLOBAL projects_0_description String NSF Abstract:\nNitrogen is an essential nutrient for phytoplankton that often limits primary production in the ocean, and its availability therefore plays a key role in global ocean productivity. The amounts and form in which nitrogen exist are controlled by microorganisms. One microorganism-mediated process is known as nitrification, which oxidizes ammonia or ammonium to nitrite and nitrite to nitrate, nitrate being the bioavailable form of nitrogen. While this is the well-accepted process of nitrification, preliminary results strongly suggest that a nitrogen-containing compound know as polyamine nitrogen may be directly converted by some microorganisms to nitrate. However, the importance of this process for global biogeochemical nitrogen cycling is unknown. The goal of this study is to evaluate the biogeochemical significance of direct oxidation of polyamine nitrogen, as a model organic nitrogen compound, to nitrification compared to canonical nitrification of ammonia. The project will result in training a postdoctoral researcher and provide opportunities for undergraduates to gain hands-on experience with research on microbial geochemistry and coastal ecosystem processes. Project personnel will also work with the Georgia Coastal Ecosystems Long-Term Ecological Research program to engage a K-12 science teacher in the project.\nAmmonia oxidation is a key step in the process of converting fixed nitrogen to dinitrogen gas and thus is central to the global nitrogen cycle and to removing excess fixed nitrogen from coastal waters with high concentrations of nutrients. Recent research has shown that Thaumarchaeota play a major role in ammonia oxidation in the ocean. Experiments with enrichment cultures and coastal water samples where ammonia oxidizing archaea are the dominant ammonia oxidizers, show that some forms of organic nitrogen may be oxidized directly to nitrogen oxides without first being regenerated as ammonium. Of the substrates tested, polyamine and particularly putrescine nitrogen appear to be oxidized directly to nitrogen oxides, while amino acid and urea nitrogen is first regenerated as ammonium and then oxidized. The investigators will examine this process in detail over three years using enrichment cultures and experiments conducted with coastal bacterioplankton. Specifically, they will aim to better understand 1) the consequences of this novel process to ocean geochemistry, 2) the fate of the carbon present in polyamines, 3) what organisms are responsible for the direct oxidation, and 4) the chemical characteristics of the organic nitrogen compounds accessible to direct oxidation.
attribute NC_GLOBAL projects_0_end_date String 2018-11
attribute NC_GLOBAL projects_0_geolocation String Coastal waters and the South Atlantic Bight continental shelf from Savannah GA out to the shelf break (SAV 17-16, UNOLS STR _104733, Marsden Grid 117, Navy Ops NA06), coastal waters around Sapelo Island, Georgia USA
attribute NC_GLOBAL projects_0_name String Collaborative Research: Direct Oxidation of Organic Nitrogen by Marine Ammonia Oxidizing Organisms
attribute NC_GLOBAL projects_0_project_nid String 757587
attribute NC_GLOBAL projects_0_start_date String 2015-12
attribute NC_GLOBAL publisher_name String Biological and Chemical Oceanographic Data Management Office (BCO-DMO)
attribute NC_GLOBAL publisher_type String institution
attribute NC_GLOBAL sourceUrl String (local files)
attribute NC_GLOBAL Southernmost_Northing double 30.32
attribute NC_GLOBAL standard_name_vocabulary String CF Standard Name Table v55
attribute NC_GLOBAL summary String This dataset contains the results of analyses related to ammonia oxidation rates, including oxidation rates of 15N supplied as ammonia, urea, 1,2 diamino ethane, 1,3 diamino propane, 1,4 diamino butane (putrescine), arginine and glutamate. Ancillary data including nutrient concentrations and the abundance of ammonia- and nitrite-oxidizing microorganisms are also reported. The samples analyzed to produce the dataset were collected off the coast of Georgia, USA. Most data were collected on one cruise in August 2017, incidental data from 2011, 2013 and 2016 are also reported.
attribute NC_GLOBAL title String Dissolved Organic Nitrogen oxidation collected on cruise SAV 17-16 in the South Atlantic Bight aboard the R/V Savannah from 2011 to 2017
attribute NC_GLOBAL version String 1
attribute NC_GLOBAL Westernmost_Easting double -81.36
attribute NC_GLOBAL xml_source String osprey2erddap.update_xml() v1.3
variable Cruise_ID String
attribute Cruise_ID bcodmo_name String cruise_id
attribute Cruise_ID description String R2R catalog identifier for this cruise
attribute Cruise_ID long_name String Cruise ID
attribute Cruise_ID units String unitless
variable Sta String
attribute Sta bcodmo_name String station
attribute Sta description String Station Identifier. Marsh Landing is on the Duplin River a tidal channel adjacent to Sapelo Island GA.
attribute Sta long_name String Sta
attribute Sta units String unitless
variable Region String
attribute Region bcodmo_name String unknown
attribute Region description String Arbitratry assignment of stations to zones in the study area identified by location and water properties:  I = Inshore; M = midshelf; S = Shelf-break; O = Oceanic
attribute Region long_name String Region
attribute Region units String unitless
variable depth double
attribute depth _CoordinateAxisType String Height
attribute depth _CoordinateZisPositive String down
attribute depth _FillValue double NaN
attribute depth actual_range double 0.2, 500.0
attribute depth axis String Z
attribute depth bcodmo_name String depth
attribute depth colorBarMaximum double 8000.0
attribute depth colorBarMinimum double -8000.0
attribute depth colorBarPalette String TopographyDepth
attribute depth description String Depth sampled in meters
attribute depth ioos_category String Location
attribute depth long_name String Depth
attribute depth nerc_identifier String https://vocab.nerc.ac.uk/collection/P09/current/DEPH/ (external link)
attribute depth positive String down
attribute depth standard_name String depth
attribute depth units String m
variable longitude double
attribute longitude _CoordinateAxisType String Lon
attribute longitude _FillValue double NaN
attribute longitude actual_range double -81.36, -78.77
attribute longitude axis String X
attribute longitude bcodmo_name String longitude
attribute longitude colorBarMaximum double 180.0
attribute longitude colorBarMinimum double -180.0
attribute longitude description String degrees longitude with positive values eastward
attribute longitude ioos_category String Location
attribute longitude long_name String Longitude
attribute longitude nerc_identifier String https://vocab.nerc.ac.uk/collection/P09/current/LONX/ (external link)
attribute longitude standard_name String longitude
attribute longitude units String degrees_east
variable latitude double
attribute latitude _CoordinateAxisType String Lat
attribute latitude _FillValue double NaN
attribute latitude actual_range double 30.32, 31.99
attribute latitude axis String Y
attribute latitude bcodmo_name String latitude
attribute latitude colorBarMaximum double 90.0
attribute latitude colorBarMinimum double -90.0
attribute latitude description String degrees latitude with positive values northward
attribute latitude ioos_category String Location
attribute latitude long_name String Latitude
attribute latitude nerc_identifier String https://vocab.nerc.ac.uk/collection/P09/current/LATX/ (external link)
attribute latitude standard_name String latitude
attribute latitude units String degrees_north
variable latitude2 String
attribute latitude2 bcodmo_name String latitude
attribute latitude2 description String Latitude in degrees and decimal minutes N
attribute latitude2 long_name String Latitude
attribute latitude2 nerc_identifier String https://vocab.nerc.ac.uk/collection/P09/current/LATX/ (external link)
attribute latitude2 standard_name String latitude
attribute latitude2 units String degrees and decimal minutes N
variable longitude2 String
attribute longitude2 bcodmo_name String longitude
attribute longitude2 description String Longitude in degrees and decimal minutes W
attribute longitude2 long_name String Longitude
attribute longitude2 nerc_identifier String https://vocab.nerc.ac.uk/collection/P09/current/LONX/ (external link)
attribute longitude2 standard_name String longitude
attribute longitude2 units String degrees and decimal minutes W
variable Date String
attribute Date bcodmo_name String date
attribute Date description String Sampling date:  MM/DD/YYYY
attribute Date long_name String Date
attribute Date nerc_identifier String https://vocab.nerc.ac.uk/collection/P01/current/ADATAA01/ (external link)
attribute Date source_name String Date
attribute Date time_precision String 1970-01-01
attribute Date units String unitless
variable ISO_Date String
attribute ISO_Date bcodmo_name String date
attribute ISO_Date description String Date following the ISO convention of YYYY-MM-DD
attribute ISO_Date long_name String ISO Date
attribute ISO_Date nerc_identifier String https://vocab.nerc.ac.uk/collection/P01/current/ADATAA01/ (external link)
attribute ISO_Date time_precision String 1970-01-01
attribute ISO_Date units String unitless
variable Bacterial_16S_rRNA float
attribute Bacterial_16S_rRNA _FillValue float NaN
attribute Bacterial_16S_rRNA actual_range float 3.36E7, 9.4800003E10
attribute Bacterial_16S_rRNA bcodmo_name String unknown
attribute Bacterial_16S_rRNA description String Concentration of genes for Bacteria 16S rRNA determined by qPCR (see qPCR parameter table) in units of copies L-1; Blank Cells = no data; either not sampled or the sample was lost; BLD = Below Limit of Detection.  See qPCR parameter table.  qPCR data are from single biological replicates; means of triplicate qPCR reactions.  Limit of detection is given as copies per mL of template DNA; the limit thus varies by sample depending on volume filtered; extract volume and template volume per per reaction.  The limits given are from this sample set assuming the minimum detectable concentration in the template used and 1 uL of template per reaction.  They are thus conservative as some reactions were run with 10 uL of template.
attribute Bacterial_16S_rRNA long_name String Bacterial 16 S R RNA
attribute Bacterial_16S_rRNA units String copies per liter filtered
variable Thaumarchaeal_16S_rRNA String
attribute Thaumarchaeal_16S_rRNA bcodmo_name String unknown
attribute Thaumarchaeal_16S_rRNA description String Concentration of genes for Marine Group 1 Archaea (Thaumarchaeota) 16S rRNA determined by qPCR (see qPCR parameter table) in units of copies L-1 Blank Cells = no data either not sampled or the sample was lost; BLD = Below Limit of Detection.  See qPCR parameter table.  qPCR data are from single biological replicates; means of triplicate qPCR reactions.  Limit of detection is given as copies per mL of template DNA; the limit thus varies by sample depending on volume filtered extract volume and template volume per per reaction.  The limits given are from this sample set assuming the minimum detectable concentration in the template used and 1 uL of template per reaction.  They are thus conservative as some reactions were run with 10 uL of template.
attribute Thaumarchaeal_16S_rRNA long_name String Thaumarchaeal 16 S R RNA
attribute Thaumarchaeal_16S_rRNA units String copies per liter filtered
variable WCA_amoA String
attribute WCA_amoA bcodmo_name String unknown
attribute WCA_amoA description String Concentration of genes for Archaeal ammonia monooxygenase subunit A  from the Water Column A clade; determined by qPCR (see qPCR parameter table) in units of copies L-1; Blank Cells = no data; either not sampled or the sample was lost; BLD = Below Limit of Detection.  See qPCR parameter table.  qPCR data are from single biological replicates; means of triplicate qPCR reactions.  Limit of detection is given as copies per mL of template DNA; the limit thus varies by sample depending on volume filtered; extract volume and template volume per per reaction.  The limits given are from this sample set assuming the minimum detectable concentration in the template used and 1 uL of template per reaction.  They are thus conservative as some reactions were run with 10 uL of template.
attribute WCA_amoA long_name String WCA Amo A
attribute WCA_amoA units String copies per liter filtered
variable WCB_amoA String
attribute WCB_amoA bcodmo_name String unknown
attribute WCB_amoA description String Concentration of genes for Archaeal ammonia monooxygenase subunit A  from the Water Column A clade; determined by qPCR (see qPCR parameter table) in units of copies L-1; \"Blank Cells = no data either not sampled or the sample was lost; BLD = Below Limit of Detection.  See qPCR parameter table.  qPCR data are from single biological replicates means of triplicate qPCR reactions.  Limit of detection is given as copies per mL of template DNA; the limit thus varies by sample depending on volume filtered extract volume and template volume per per reaction.  The limits given are from this sample set assuming the minimum detectable concentration in the template used and 1 uL of template per reaction.  They are thus conservative as some reactions were run with 10 uL of template.
attribute WCB_amoA long_name String WCB Amo A
attribute WCB_amoA units String copies per liter filtered
variable Nitrospina_16S_rRNA String
attribute Nitrospina_16S_rRNA bcodmo_name String unknown
attribute Nitrospina_16S_rRNA description String Concentration of genes for Nitrospina 16S rRNA determined by qPCR (see qPCR parameter table) in units of copies L-1; Blank Cells = no data; either not sampled or the sample was lost; BLD = Below Limit of Detection.  See qPCR parameter table.  qPCR data are from single biological replicates; means of triplicate qPCR reactions.  Limit of detection is given as copies per mL of template DNA; the limit thus varies by sample depending on volume filtered; extract volume and template volume per per reaction.  The limits given are from this sample set assuming the minimum detectable concentration in the template used and 1 uL of template per reaction.  They are thus conservative as some reactions were run with 10 uL of template.
attribute Nitrospina_16S_rRNA long_name String Nitrospina 16 S R RNA
attribute Nitrospina_16S_rRNA units String copies per liter filtered
variable N15_added byte
attribute N15_added _FillValue byte 127
attribute N15_added actual_range byte 10, 50
attribute N15_added bcodmo_name String unknown
attribute N15_added description String Final concentration of uniformly 15N labeled test substrates
attribute N15_added long_name String N15 Added
attribute N15_added units String nanomoles per liter
variable Ammonia_Oxidation String
attribute Ammonia_Oxidation bcodmo_name String unknown
attribute Ammonia_Oxidation description String Ammonia oxidation rate determined from conversion of 15N-labeled ammonium to 15N-labeled nitrite plus nitrate; BLD = Below Limit of Detection. 15N data are mean ± S.E.M. of duplicate biological replicates (see Damashek et al. 2018 for details) . Based on a propagation of error calculation; our conservative estimate of the precision of 15N measurements  ±4‰ for samples at natural abundance and ±5.2‰ for samples artificially enriched with carrier 15N. Our limit of detection was similar to that reported by Santoro et al. (2013) and Beman et al. (2011).
attribute Ammonia_Oxidation long_name String Ammonia Oxidation
attribute Ammonia_Oxidation units String nanomoles per liter per day
variable Ammonia_Oxidation_sd float
attribute Ammonia_Oxidation_sd _FillValue float NaN
attribute Ammonia_Oxidation_sd actual_range float 0.12, 48.28
attribute Ammonia_Oxidation_sd bcodmo_name String unknown
attribute Ammonia_Oxidation_sd colorBarMaximum double 50.0
attribute Ammonia_Oxidation_sd colorBarMinimum double 0.0
attribute Ammonia_Oxidation_sd description String Deviation of ammonia oxidation rate determined from conversion of 15N-labeled ammonium to 15N-labeled nitrite plus nitrate; BLD = Below Limit of Detection. 15N data are mean ± S.E.M. of duplicate biological replicates (see Damashek et al. 2018 for details) . Based on a propagation of error calculation; our conservative estimate of the precision of 15N measurements  ±4‰ for samples at natural abundance and ±5.2‰ for samples artificially enriched with carrier 15N. Our limit of detection was similar to that reported by Santoro et al. (2013) and Beman et al. (2011).
attribute Ammonia_Oxidation_sd long_name String Ammonia Oxidation Sd
attribute Ammonia_Oxidation_sd units String nanomoles per liter per day
variable N15_ox_from_PUT String
attribute N15_ox_from_PUT bcodmo_name String unknown
attribute N15_ox_from_PUT description String Oxidation rate of 15N from putrescine (1;4 diamino butane) determined from conversion of the 15N label to 15N-labeled nitrite plus nitrate; BLD = Below Limit of Detection. 15N data are mean ± S.E.M. of duplicate biological replicates (see Damashek et al. 2018 for details) . Based on a propagation of error calculation our conservative estimate of the precision of 15N measurements  ±4‰ for samples at natural abundance and ±5.2‰ for samples artificially enriched with carrier 15N. Our limit of detection was similar to that reported by Santoro et al. (2013) and Beman et al. (2011).
attribute N15_ox_from_PUT long_name String N15 Ox From PUT
attribute N15_ox_from_PUT units String nanomoles per liter per day
variable N15_ox_from_PUT_sd float
attribute N15_ox_from_PUT_sd _FillValue float NaN
attribute N15_ox_from_PUT_sd actual_range float 0.01, 8.09
attribute N15_ox_from_PUT_sd bcodmo_name String unknown
attribute N15_ox_from_PUT_sd colorBarMaximum double 50.0
attribute N15_ox_from_PUT_sd colorBarMinimum double 0.0
attribute N15_ox_from_PUT_sd description String Deviation of oxidation rate of 15N from putrescine (1;4 diamino butane) determined from conversion of the 15N label to 15N-labeled nitrite plus nitrate; BLD = Below Limit of Detection. 15N data are mean ± S.E.M. of duplicate biological replicates (see Damashek et al. 2018 for details) . Based on a propagation of error calculation our conservative estimate of the precision of 15N measurements  ±4‰ for samples at natural abundance and ±5.2‰ for samples artificially enriched with carrier 15N. Our limit of detection was similar to that reported by Santoro et al. (2013) and Beman et al. (2011).
attribute N15_ox_from_PUT_sd long_name String N15 Ox From PUT Sd
attribute N15_ox_from_PUT_sd units String nanomoles per liter per day
variable N15_ox_from_GLU String
attribute N15_ox_from_GLU bcodmo_name String unknown
attribute N15_ox_from_GLU description String Oxidation rate of 15N from L-glutamate determined from conversion of the 15N label to 15N-labeled nitrite plus nitrate; BLD = Below Limit of Detection. 15N data are mean ± S.E.M. of duplicate biological replicates (see Damashek et al. 2018 for details) . Based on a propagation of error calculation; our conservative estimate of the precision of 15N measurements  ±4‰ for samples at natural abundance and ±5.2‰ for samples artificially enriched with carrier 15N. Our limit of detection was similar to that reported by Santoro et al. (2013) and Beman et al. (2011).
attribute N15_ox_from_GLU long_name String N15 Ox From GLU
attribute N15_ox_from_GLU units String nanomoles per liter per day
variable N15_ox_from_GLU_sd float
attribute N15_ox_from_GLU_sd _FillValue float NaN
attribute N15_ox_from_GLU_sd actual_range float 0.0, 2.63
attribute N15_ox_from_GLU_sd bcodmo_name String unknown
attribute N15_ox_from_GLU_sd colorBarMaximum double 50.0
attribute N15_ox_from_GLU_sd colorBarMinimum double 0.0
attribute N15_ox_from_GLU_sd description String deviation of oxidation rate of 15N from L-glutamate determined from conversion of the 15N label to 15N-labeled nitrite plus nitrate; BLD = Below Limit of Detection. 15N data are mean ± S.E.M. of duplicate biological replicates (see Damashek et al. 2018 for details) . Based on a propagation of error calculation; our conservative estimate of the precision of 15N measurements ±4‰ for samples at natural abundance and ±5.2‰ for samples artificially enriched with carrier 15N. Our limit of detection was similar to that reported by Santoro et al. (2013) and Beman et al. (2011).
attribute N15_ox_from_GLU_sd long_name String N15 Ox From GLU Sd
attribute N15_ox_from_GLU_sd units String nanomoles per liter per day
variable N15_ox_from_UREA float
attribute N15_ox_from_UREA _FillValue float NaN
attribute N15_ox_from_UREA actual_range float 0.02, 62.53
attribute N15_ox_from_UREA bcodmo_name String unknown
attribute N15_ox_from_UREA description String Oxidation rate of 15N from urea determined from conversion of the 15N label to 15N-labeled nitrite plus nitrate BLD = Below Limit of Detection. 15N data are mean ± S.E.M. of duplicate biological replicates (see Damashek et al. 2018 for details) . Based on a propagation of error calculation; our conservative estimate of the precision of 15N measurements  ±4‰ for samples at natural abundance and ±5.2‰ for samples artificially enriched with carrier 15N. Our limit of detection was similar to that reported by Santoro et al. (2013) and Beman et al. (2011).
attribute N15_ox_from_UREA long_name String N15 Ox From UREA
attribute N15_ox_from_UREA units String nanomoles per liter per day
variable N15_ox_from_UREA_sd float
attribute N15_ox_from_UREA_sd _FillValue float NaN
attribute N15_ox_from_UREA_sd actual_range float 0.01, 39.41
attribute N15_ox_from_UREA_sd bcodmo_name String unknown
attribute N15_ox_from_UREA_sd colorBarMaximum double 50.0
attribute N15_ox_from_UREA_sd colorBarMinimum double 0.0
attribute N15_ox_from_UREA_sd description String Deviation of oxidation rate of 15N from urea determined from conversion of the 15N label to 15N-labeled nitrite plus nitrate BLD = Below Limit of Detection. 15N data are mean ± S.E.M. of duplicate biological replicates (see Damashek et al. 2018 for details) . Based on a propagation of error calculation; our conservative estimate of the precision of 15N measurements  ±4‰ for samples at natural abundance and ±5.2‰ for samples artificially enriched with carrier 15N. Our limit of detection was similar to that reported by Santoro et al. (2013) and Beman et al. (2011).
attribute N15_ox_from_UREA_sd long_name String N15 Ox From UREA Sd
attribute N15_ox_from_UREA_sd units String nanomoles per liter per day
variable N15_ox_from_DAE float
attribute N15_ox_from_DAE _FillValue float NaN
attribute N15_ox_from_DAE actual_range float -0.02, 8.68
attribute N15_ox_from_DAE bcodmo_name String unknown
attribute N15_ox_from_DAE description String Oxidation rate of 15N from 1;2 diamino ethane determined from conversion of the 15N label to 15N-labeled nitrite plus nitrate; BLD = Below Limit of Detection. 15N data are mean ± S.E.M. of duplicate biological replicates (see Damashek et al. 2018 for details) . Based on a propagation of error calculation; our conservative estimate of the precision of 15N measurements  ±4‰ for samples at natural abundance and ±5.2‰ for samples artificially enriched with carrier 15N. Our limit of detection was similar to that reported by Santoro et al. (2013) and Beman et al. (2011).
attribute N15_ox_from_DAE long_name String N15 Ox From DAE
attribute N15_ox_from_DAE units String nanomoles per liter per day
variable N15_ox_from_DAE_sd float
attribute N15_ox_from_DAE_sd _FillValue float NaN
attribute N15_ox_from_DAE_sd actual_range float 0.02, 2.43
attribute N15_ox_from_DAE_sd bcodmo_name String unknown
attribute N15_ox_from_DAE_sd colorBarMaximum double 50.0
attribute N15_ox_from_DAE_sd colorBarMinimum double 0.0
attribute N15_ox_from_DAE_sd description String Deviation of oxidation rate of 15N from 1;2 diamino ethane determined from conversion of the 15N label to 15N-labeled nitrite plus nitrate; BLD = Below Limit of Detection. 15N data are mean ± S.E.M. of duplicate biological replicates (see Damashek et al. 2018 for details) . Based on a propagation of error calculation; our conservative estimate of the precision of 15N measurements  ±4‰ for samples at natural abundance and ±5.2‰ for samples artificially enriched with carrier 15N. Our limit of detection was similar to that reported by Santoro et al. (2013) and Beman et al. (2011).
attribute N15_ox_from_DAE_sd long_name String N15 Ox From DAE Sd
attribute N15_ox_from_DAE_sd units String nanomoles per liter per day
variable N15_ox_from_DAP float
attribute N15_ox_from_DAP _FillValue float NaN
attribute N15_ox_from_DAP actual_range float -0.01, 53.63
attribute N15_ox_from_DAP bcodmo_name String unknown
attribute N15_ox_from_DAP description String Oxidation rate of 15N from 1;3 diamino propane determined from conversion of the 15N label to 15N-labeled nitrite plus nitrate; BLD = Below Limit of Detection. 15N data are mean ± S.E.M. of duplicate biological replicates (see Damashek et al. 2018 for details) . Based on a propagation of error calculation; our conservative estimate of the precision of 15N measurements  ±4‰ for samples at natural abundance and ±5.2‰ for samples artificially enriched with carrier 15N. Our limit of detection was similar to that reported by Santoro et al. (2013) and Beman et al. (2011).
attribute N15_ox_from_DAP long_name String N15 Ox From DAP
attribute N15_ox_from_DAP units String nanomoles per liter per day
variable N15_ox_from_DAP_sd float
attribute N15_ox_from_DAP_sd _FillValue float NaN
attribute N15_ox_from_DAP_sd actual_range float 0.02, 2.99
attribute N15_ox_from_DAP_sd bcodmo_name String unknown
attribute N15_ox_from_DAP_sd colorBarMaximum double 50.0
attribute N15_ox_from_DAP_sd colorBarMinimum double 0.0
attribute N15_ox_from_DAP_sd description String Deviation of oxidation rate of 15N from 1;3 diamino propane determined from conversion of the 15N label to 15N-labeled nitrite plus nitrate; BLD = Below Limit of Detection. 15N data are mean ± S.E.M. of duplicate biological replicates (see Damashek et al. 2018 for details) . Based on a propagation of error calculation; our conservative estimate of the precision of 15N measurements  ±4‰ for samples at natural abundance and ±5.2‰ for samples artificially enriched with carrier 15N. Our limit of detection was similar to that reported by Santoro et al. (2013) and Beman et al. (2011).
attribute N15_ox_from_DAP_sd long_name String N15 Ox From DAP Sd
attribute N15_ox_from_DAP_sd units String nanomoles per liter per day
variable N15_ox_from_ARG float
attribute N15_ox_from_ARG _FillValue float NaN
attribute N15_ox_from_ARG actual_range float 0.07, 75.04
attribute N15_ox_from_ARG bcodmo_name String unknown
attribute N15_ox_from_ARG description String Oxidation rate of 15N from L-arginine determined from conversion of the 15N label to 15N-labeled nitrite plus nitrate; BLD = Below Limit of Detection. 15N data are mean ± S.E.M. of duplicate biological replicates (see Damashek et al. 2018 for details) . Based on a propagation of error calculation our conservative estimate of the precision of 15N measurements  ±4‰ for samples at natural abundance and ±5.2‰ for samples artificially enriched with carrier 15N. Our limit of detection was similar to that reported by Santoro et al. (2013) and Beman et al. (2011).
attribute N15_ox_from_ARG long_name String N15 Ox From ARG
attribute N15_ox_from_ARG units String nanomoles per liter per day
variable N15_ox_from_ARG_sd float
attribute N15_ox_from_ARG_sd _FillValue float NaN
attribute N15_ox_from_ARG_sd actual_range float 0.11, 13.58
attribute N15_ox_from_ARG_sd bcodmo_name String unknown
attribute N15_ox_from_ARG_sd colorBarMaximum double 50.0
attribute N15_ox_from_ARG_sd colorBarMinimum double 0.0
attribute N15_ox_from_ARG_sd description String Deviation of oxidation rate of 15N from L-arginine determined from conversion of the 15N label to 15N-labeled nitrite plus nitrate; BLD = Below Limit of Detection. 15N data are mean ± S.E.M. of duplicate biological replicates (see Damashek et al. 2018 for details) . Based on a propagation of error calculation our conservative estimate of the precision of 15N measurements  ±4‰ for samples at natural abundance and ±5.2‰ for samples artificially enriched with carrier 15N. Our limit of detection was similar to that reported by Santoro et al. (2013) and Beman et al. (2011).
attribute N15_ox_from_ARG_sd long_name String N15 Ox From ARG Sd
attribute N15_ox_from_ARG_sd units String nanomoles per liter per day
variable Nitrate String
attribute Nitrate bcodmo_name String NO3
attribute Nitrate description String Concentration of nitrate determined by cadmium reduction to nitrite followed by subtraction nitrite already present in the sample; Samples run on an autoanalyzer by Francis Wilkerson's lab at San Francisco State University
attribute Nitrate long_name String Nitrate
attribute Nitrate nerc_identifier String https://vocab.nerc.ac.uk/collection/P01/current/NTRAIGGS/ (external link)
attribute Nitrate units String micromoles per liter
variable Nitrite float
attribute Nitrite _FillValue float NaN
attribute Nitrite actual_range float 0.02, 5.12
attribute Nitrite bcodmo_name String NO2
attribute Nitrite colorBarMaximum double 1.0
attribute Nitrite colorBarMinimum double 0.0
attribute Nitrite description String Concentration of nitrite determined by autoanalyzer; Samples run on an autoanalyzer by Francis Wilkerson's lab at San Francisco State University
attribute Nitrite long_name String Mole Concentration Of Nitrite In Sea Water
attribute Nitrite nerc_identifier String https://vocab.nerc.ac.uk/collection/P01/current/NTRIAAZX/ (external link)
attribute Nitrite units String micromoles per liter
variable Ammonium float
attribute Ammonium _FillValue float NaN
attribute Ammonium actual_range float 0.03, 1.35
attribute Ammonium bcodmo_name String Ammonium
attribute Ammonium colorBarMaximum double 5.0
attribute Ammonium colorBarMinimum double 0.0
attribute Ammonium description String Concentration of ammonium determined by autoanalyzer; Samples run on an autoanalyzer by Francis Wilkerson's lab at San Francisco State University
attribute Ammonium long_name String Mole Concentration Of Ammonium In Sea Water
attribute Ammonium nerc_identifier String https://vocab.nerc.ac.uk/collection/P01/current/AMONAAZX/ (external link)
attribute Ammonium units String micromoles per liter
variable Urea float
attribute Urea _FillValue float NaN
attribute Urea actual_range float 0.0, 1.18
attribute Urea bcodmo_name String Urea
attribute Urea description String Concentration of urea determined by the carboxythiazole method; Samples run in Hollibaugh lab at UGA
attribute Urea long_name String Urea
attribute Urea nerc_identifier String https://vocab.nerc.ac.uk/collection/P01/current/UREAAAZX/ (external link)
attribute Urea units String micromoles per liter
variable Silicate float
attribute Silicate _FillValue float NaN
attribute Silicate actual_range float 0.7, 77.73
attribute Silicate bcodmo_name String SiOH_4
attribute Silicate description String Concentration of silicate determined by autoanalyzer; Samples run on an autoanalyzer by Francis Wilkerson's lab at San Francisco State University
attribute Silicate long_name String Mass Concentration Of Silicate In Sea Water
attribute Silicate units String micromoles per liter
variable Phosphate float
attribute Phosphate _FillValue float NaN
attribute Phosphate actual_range float 0.024, 1.853
attribute Phosphate bcodmo_name String unknown
attribute Phosphate description String Concentration of phosphate determined by autoanalyzer; Samples run on an autoanalyzer by Francis Wilkerson's lab at San Francisco State University
attribute Phosphate long_name String Mass Concentration Of Phosphate In Sea Water
attribute Phosphate units String micromoles per liter
variable Temperature float
attribute Temperature _FillValue float NaN
attribute Temperature actual_range float 7.82, 31.3
attribute Temperature bcodmo_name String temperature
attribute Temperature description String Water temperature in centigrade degrees at the depth sampled measured by the environmental sensing package on the samplling rosette
attribute Temperature long_name String Temperature
attribute Temperature nerc_identifier String https://vocab.nerc.ac.uk/collection/P01/current/TEMPP901/ (external link)
attribute Temperature units String degrees centigrade
variable Salinity float
attribute Salinity _FillValue float NaN
attribute Salinity actual_range float 22.1, 36.86
attribute Salinity bcodmo_name String sal
attribute Salinity colorBarMaximum double 37.0
attribute Salinity colorBarMinimum double 32.0
attribute Salinity description String Salinity at the depth sampled derived from temperature and conductivity measured by the environmental sensing package on the samplling rosette
attribute Salinity long_name String Sea Water Practical Salinity
attribute Salinity nerc_identifier String https://vocab.nerc.ac.uk/collection/P01/current/PSALST01/ (external link)
attribute Salinity units String PSU
variable Diss_Oxygen float
attribute Diss_Oxygen _FillValue float NaN
attribute Diss_Oxygen actual_range float 3.63, 6.38
attribute Diss_Oxygen bcodmo_name String dissolved Oxygen
attribute Diss_Oxygen description String Dissolved oxygen concentration at the depth sampled measured by the environmental sensing package on the samplling rosette
attribute Diss_Oxygen long_name String Diss Oxygen
attribute Diss_Oxygen units String milliliters per liter
variable Relative_Fluor float
attribute Relative_Fluor _FillValue float NaN
attribute Relative_Fluor actual_range float 0.46, 16.44
attribute Relative_Fluor bcodmo_name String fluorescence
attribute Relative_Fluor description String Relative Fluorescence measured by the fluorometer on the Niskin rosette sampler converted to mg Chl a L-1 using a regression equation based on extracted chlorophyll data: Chl a = 1.7869RF - 2.2541; R² = 0.83
attribute Relative_Fluor long_name String Relative Fluor
attribute Relative_Fluor nerc_identifier String https://vocab.nerc.ac.uk/collection/P01/current/CPHLPM01/ (external link)
attribute Relative_Fluor units String relative fluorescence
variable Atten_Coeff float
attribute Atten_Coeff _FillValue float NaN
attribute Atten_Coeff actual_range float 0.01, 1.47
attribute Atten_Coeff bcodmo_name String beam_cp
attribute Atten_Coeff description String PAR attenuation coefficient kz in m-1 calculated as the slope of log(PAR) vs depth
attribute Atten_Coeff long_name String Atten Coeff
attribute Atten_Coeff nerc_identifier String https://vocab.nerc.ac.uk/collection/P01/current/ATTNZZ01/ (external link)
attribute Atten_Coeff units String per meter
variable comment String
attribute comment bcodmo_name String comment
attribute comment description String identifier for the comment. comment value a signifies Environmental data, bacterial 16S, thaumarchaeal 16S, AOB amoA, ammonia oxidation, and urea oxidation data were reported previously in Liu et al. (2015) or Tolar et al. (2017);
attribute comment long_name String Comment
attribute comment units String unitless

 
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